@codyswann/lisa 2.195.4 → 2.195.7

package/dist/codex/settings-installer.js

@@ -10,7 +10,7 @@
  * Lisa-managed keys (currently a small set; expand as needs arise):
  *   - `project_doc_max_bytes`: bumped to 65536 so AGENTS.md content beyond
  *     Codex's 32 KiB default isn't truncated.
- *   - `[features].codex_hooks`: enabled so Lisa lifecycle checks actually run.
+ *   - `[features].hooks`: enabled so Lisa lifecycle checks actually run.
  * @module codex/settings-installer
  */
 import * as fse from "fs-extra";
@@ -33,8 +33,9 @@ export const LISA_REQUIRED_SETTINGS = {
 };
 /** Lisa-required feature flags under `[features]` */
 export const LISA_REQUIRED_FEATURES = {
-    codex_hooks: true,
+    hooks: true,
 };
+const DEPRECATED_HOOKS_FEATURE = "codex_hooks";
 /**
  * Install or update Lisa's required settings in `.codex/config.toml`.
  *
@@ -281,7 +282,19 @@ function applyRequiredFeatures(toml) {
     }
     const featuresEnd = findNextSectionHeaderIndex(lines, featuresStart + 1);
     const sectionEnd = featuresEnd === -1 ? lines.length : featuresEnd;
-    const updated = Object.entries(LISA_REQUIRED_FEATURES).reduce((acc, [key, value]) => upsertSectionKey(acc, featuresStart, sectionEnd, key, value), lines);
+    const sectionLines = lines.slice(featuresStart + 1, sectionEnd);
+    const deprecatedOffset = sectionLines.findIndex(line => new RegExp(`^\\s*${DEPRECATED_HOOKS_FEATURE}\\s*=`).test(line));
+    const deprecatedIndex = featuresStart + 1 + deprecatedOffset;
+    const replacementExists = sectionLines.some(line => /^\s*hooks\s*=/.test(line));
+    const migrated = lines.flatMap((line, index) => {
+        if (deprecatedOffset === -1 || index !== deprecatedIndex)
+            return [line];
+        return replacementExists
+            ? []
+            : [line.replace(DEPRECATED_HOOKS_FEATURE, "hooks")];
+    });
+    const migratedEnd = sectionEnd - (migrated.length === lines.length ? 0 : 1);
+    const updated = Object.entries(LISA_REQUIRED_FEATURES).reduce((acc, [key, value]) => upsertSectionKey(acc, featuresStart, migratedEnd, key, value), migrated);
     return updated.join("\n");
 }
 /**

package/dist/codex/settings-installer.js.map

@@ -1 +1 @@
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package/dist/codex/skills-installer.d.ts

@@ -1,34 +1,30 @@
+import type { ProjectType } from "../core/config.js";
 export { convertCommandToSkill } from "./command-skill-transformer.js";
 export { LISA_COMMAND_SKILL_PREFIX } from "../core/lisa-skill-sources.js";
-/** Subdirectory inside `.codex/skills/` where Lisa-owned skills live */
+/** Subdirectory inside `.codex/skills/` wholly owned by Lisa. */
 export declare const LISA_SKILLS_SUBDIR: string;
-/** Result of one skill copy */
+/** Result of cataloging one plugin skill. */
 export interface InstalledSkill {
-    /** Skill name (matches the SKILL.md `name` frontmatter) */
     readonly name: string;
-    /** Source kind: bundled skill folder or generated from command */
-    readonly source: "bundled" | "command";
-    /** Path written, relative to `.codex/` */
+    readonly source: "bundled";
+    /** Plugin source path relative to the Lisa package root. */
     readonly relativePath: string;
 }
-/** Aggregated result */
+/** Aggregated result of project skill reconciliation. */
 export interface SkillsInstallResult {
     readonly installed: readonly InstalledSkill[];
     readonly managedFiles: readonly string[];
-    /** Skill directories deleted because Lisa stopped shipping them */
     readonly deleted: readonly string[];
+    readonly modelVisible: number;
 }
 /**
- * Install all Lisa-bundled skills + command-derived skills.
- *
- * Stale skills (in the previous manifest but no longer in Lisa's catalog)
- * are deleted from `.codex/skills/lisa/` so renames in the source tree
- * don't leave orphan directories behind.
- * @param lisaDir - Absolute path to the Lisa repo root
- * @param destDir - Absolute path to the host project root
- * @param previousManagedFiles - Files Lisa managed on the previous run
- *   (relative to `.codex/`); used to detect stale skill directories
- * @returns Result describing installed skills + managed files + deletions
+ * Catalog the applicable base, stack, and configured-feature plugin skills.
+ * Exact duplicate names are resolved by shared base-first/stack-last discovery.
+ * @param lisaDir Lisa repository or installed package root.
+ * @param destDir Host project root.
+ * @param previousManagedFiles Previous `.codex` ownership manifest entries.
+ * @param detectedTypes Expanded detected project types.
+ * @returns Selected plugin catalog and legacy cleanup metadata.
  */
-export declare function installSkills(lisaDir: string, destDir: string, previousManagedFiles: readonly string[]): Promise<SkillsInstallResult>;
+export declare function installSkills(lisaDir: string, destDir: string, previousManagedFiles: readonly string[], detectedTypes?: readonly ProjectType[]): Promise<SkillsInstallResult>;
 //# sourceMappingURL=skills-installer.d.ts.map

package/dist/codex/skills-installer.d.ts.map

@@ -1 +1 @@
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package/dist/codex/skills-installer.js

@@ -1,161 +1,68 @@
 /**
- * Install Lisa-bundled skills into a host project's `.codex/skills/lisa/`.
+ * Reconcile the selected Lisa skill catalog exposed by repository plugins.
  *
- * Skills are the open Agent Skills format (SKILL.md + optional siblings).
- * Codex discovers them from the project config folder (`<destDir>/.codex/`)
- * via the loader at `codex-rs/core-skills/src/loader.rs`.
- *
- * What this installs:
- *   1. Lisa-bundled skill folders from `plugins/<p>/skills/<n>/` are copied
- *      verbatim to `.codex/skills/lisa/<n>/`.
- *   2. Lisa commands (e.g., `plugins/lisa/commands/fix.md`) are converted
- *      to skills since Codex has no first-class slash-command extension
- *      point. A command at `commands/jira/create.md` becomes a skill named
- *      `lisa-jira-create` invocable via `$lisa-jira-create`.
- *
- * The lisa-namespace prefix ensures Lisa's commands-as-skills don't collide
- * with same-named skills (e.g., Lisa's `fix.md` command + Lisa's existing
- * `fix` skill if one ever existed).
- *
- * Source discovery (walking the plugin tree, dedup, denylist) is shared with
- * the OpenCode overlay via `core/lisa-skill-sources`; only the copy/stale/
- * target-directory logic is Codex-specific and lives here.
+ * The repository marketplace is Codex's only native skill delivery path. This
+ * module counts the selected, deduplicated catalog and removes obsolete router
+ * and link artifacts from older Lisa versions.
  * @module codex/skills-installer
  */
-import * as fse from "fs-extra";
-import { mkdir, copyFile, readFile, rm, writeFile } from "node:fs/promises";
+import { rm } from "node:fs/promises";
 import * as path from "node:path";
-import { discoverBundledSkills, discoverLisaCommands, isHarnessVariantPlugin, loadSkillDenylist, } from "../core/lisa-skill-sources.js";
-import { convertCommandToSkill } from "./command-skill-transformer.js";
+import { discoverBundledSkills, loadSkillDenylist, } from "../core/lisa-skill-sources.js";
+import { projectPluginFilter, selectProjectLisaPlugins, } from "../core/lisa-plugin-selection.js";
 export { convertCommandToSkill } from "./command-skill-transformer.js";
 export { LISA_COMMAND_SKILL_PREFIX } from "../core/lisa-skill-sources.js";
-/** Subdirectory inside `.codex/skills/` where Lisa-owned skills live */
+/** Subdirectory inside `.codex/skills/` wholly owned by Lisa. */
 export const LISA_SKILLS_SUBDIR = path.join("skills", "lisa");
-/** Filename of the skill manifest at the root of every skill folder */
-const SKILL_MD_FILENAME = "SKILL.md";
-/** Path to the Codex skill distribution policy, relative to the Lisa root */
+/** Retired router catalog removed during reconciliation. */
+const LEGACY_LIBRARY_SUBDIR = "lisa-library";
 const INTERNAL_CODEX_SKILL_POLICY_RELATIVE_PATH = path.join("scripts", "internal-codex-skill-policy.json");
 /**
- * Install all Lisa-bundled skills + command-derived skills.
- *
- * Stale skills (in the previous manifest but no longer in Lisa's catalog)
- * are deleted from `.codex/skills/lisa/` so renames in the source tree
- * don't leave orphan directories behind.
- * @param lisaDir - Absolute path to the Lisa repo root
- * @param destDir - Absolute path to the host project root
- * @param previousManagedFiles - Files Lisa managed on the previous run
- *   (relative to `.codex/`); used to detect stale skill directories
- * @returns Result describing installed skills + managed files + deletions
+ * Catalog the applicable base, stack, and configured-feature plugin skills.
+ * Exact duplicate names are resolved by shared base-first/stack-last discovery.
+ * @param lisaDir Lisa repository or installed package root.
+ * @param destDir Host project root.
+ * @param previousManagedFiles Previous `.codex` ownership manifest entries.
+ * @param detectedTypes Expanded detected project types.
+ * @returns Selected plugin catalog and legacy cleanup metadata.
  */
-export async function installSkills(lisaDir, destDir, previousManagedFiles) {
-    const skillsDir = path.join(destDir, ".codex", LISA_SKILLS_SUBDIR);
-    await fse.ensureDir(skillsDir);
+export async function installSkills(lisaDir, destDir, previousManagedFiles, detectedTypes = []) {
+    const codexDir = path.join(destDir, ".codex");
+    const skillsDir = path.join(codexDir, LISA_SKILLS_SUBDIR);
+    const selectedPlugins = await selectProjectLisaPlugins(destDir, detectedTypes);
     const denylistedSkills = await loadSkillDenylist(lisaDir, INTERNAL_CODEX_SKILL_POLICY_RELATIVE_PATH);
-    // Step 1: bundled skills
-    const bundled = await discoverBundledSkills(lisaDir, denylistedSkills, pluginName => !isHarnessVariantPlugin(pluginName));
-    const bundledInstalls = await Promise.all(bundled.map(source => copyBundledSkill(source, skillsDir)));
-    const bundledFiles = bundled.flatMap(source => source.files.map(file => path.join(LISA_SKILLS_SUBDIR, source.skillName, file)));
-    // Step 2: command-as-skill conversions (skip when the bundled skill already
-    // owns the target name — e.g. `lisa-implement` ships as a bundled skill, so
-    // the thin command wrapper would only duplicate it on Codex).
-    const bundledSkillNames = new Set(bundled.map(source => source.skillName));
-    const commandSkills = (await discoverLisaCommands(lisaDir, pluginName => !isHarnessVariantPlugin(pluginName))).filter(cmd => !bundledSkillNames.has(cmd.skillName));
-    const commandInstalls = await Promise.all(commandSkills.map(cmd => emitCommandAsSkill(cmd, skillsDir)));
-    const commandFiles = commandInstalls.map(install => path.join(LISA_SKILLS_SUBDIR, install.name, SKILL_MD_FILENAME));
-    const installed = [
-        ...bundledInstalls,
-        ...commandInstalls,
-    ];
-    // Step 3: delete stale skill directories
-    const deleted = await deleteStaleSkills(previousManagedFiles, new Set(installed.map(s => s.name)), destDir);
+    const bundled = await discoverBundledSkills(lisaDir, denylistedSkills, projectPluginFilter(selectedPlugins));
+    const previousNames = extractPreviousSkillNames(previousManagedFiles);
+    const deleted = [...previousNames].sort((left, right) => left.localeCompare(right));
+    await Promise.all([
+        rm(skillsDir, { force: true, recursive: true }),
+        rm(path.join(codexDir, LEGACY_LIBRARY_SUBDIR), {
+            force: true,
+            recursive: true,
+        }),
+    ]);
+    const installed = bundled.map(source => ({
+        name: source.skillName,
+        source: "bundled",
+        relativePath: path.relative(lisaDir, source.sourceDir),
+    }));
     return {
         installed: Object.freeze(installed),
-        managedFiles: Object.freeze([...bundledFiles, ...commandFiles]),
+        managedFiles: Object.freeze([]),
         deleted: Object.freeze(deleted),
+        modelVisible: installed.length,
     };
 }
 /**
- * Delete skill directories that were Lisa-managed last run but aren't
- * shipped this run. Identifies skill names from the previous manifest by
- * looking for paths inside `.codex/skills/lisa/<name>/...`.
- *
- * Whole directories are removed (not individual files) so siblings the host
- * accidentally added inside a Lisa skill folder also disappear — Lisa owns
- * the directory boundary, not just specific files.
- * @param previousManagedFiles - Files Lisa managed on the previous run
- *   (relative to `.codex/`)
- * @param currentSkillNames - Skill names Lisa is shipping this run
- * @param destDir - Absolute path to the host project root
- * @returns Sorted list of stale skill names that were deleted
- */
-async function deleteStaleSkills(previousManagedFiles, currentSkillNames, destDir) {
-    const lisaSkillsPrefix = `${LISA_SKILLS_SUBDIR}${path.sep}`;
-    const previousSkillNames = extractPreviousSkillNames(previousManagedFiles, lisaSkillsPrefix);
-    const stale = previousSkillNames.filter(name => !currentSkillNames.has(name));
-    await Promise.all(stale.map(async (name) => {
-        const absPath = path.join(destDir, ".codex", LISA_SKILLS_SUBDIR, name);
-        if (await fse.pathExists(absPath)) {
-            await rm(absPath, { recursive: true, force: true });
-        }
-    }));
-    return Object.freeze([...stale].sort((a, b) => a.localeCompare(b)));
-}
-/**
- * Pick the unique skill-folder names out of the previous manifest's file
- * list — every path inside `.codex/skills/lisa/<name>/...` contributes
- * `<name>` to the result.
- * @param previousManagedFiles - Files Lisa managed on the previous run
- * @param lisaSkillsPrefix - The path prefix that identifies Lisa skill files
- * @returns Unique skill names extracted from those paths
- */
-function extractPreviousSkillNames(previousManagedFiles, lisaSkillsPrefix) {
-    const names = previousManagedFiles
-        .filter(file => file.startsWith(lisaSkillsPrefix))
-        .map(file => file.slice(lisaSkillsPrefix.length).split(path.sep)[0])
-        .filter((name) => Boolean(name));
-    return Array.from(new Set(names));
-}
-/**
- * Copy one bundled skill folder verbatim into the host's `.codex/skills/lisa/`.
- * @param source - Bundled-skill source to copy
- * @param skillsDir - Absolute path to `<destDir>/.codex/skills/lisa/`
- * @returns Result describing the installed skill
- */
-async function copyBundledSkill(source, skillsDir) {
-    const destSkillDir = path.join(skillsDir, source.skillName);
-    await fse.ensureDir(destSkillDir);
-    await Promise.all(source.files.map(async (file) => {
-        const srcPath = path.join(source.sourceDir, file);
-        const destPath = path.join(destSkillDir, file);
-        await mkdir(path.dirname(destPath), { recursive: true });
-        await copyFile(srcPath, destPath);
-    }));
-    return {
-        name: source.skillName,
-        source: "bundled",
-        relativePath: path.join(LISA_SKILLS_SUBDIR, source.skillName),
-    };
-}
-/**
- * Convert a Lisa command Markdown file into a Codex skill.
- *
- * The command's frontmatter becomes skill metadata plus a compatibility note.
- * The command body becomes the skill body, with `$ARGUMENTS` replaced by an
- * explicit instruction to use the user's surrounding request as arguments.
- * @param cmd - Discovered command source
- * @param skillsDir - Absolute path to `<destDir>/.codex/skills/lisa/`
- * @returns Result describing the installed (command-derived) skill
+ * Extract previously managed native skill directory names.
+ * @param previousManagedFiles Previous `.codex` ownership entries.
+ * @returns Unique previous skill directory names.
  */
-async function emitCommandAsSkill(cmd, skillsDir) {
-    const sourceContent = await readFile(cmd.sourcePath, "utf8");
-    const skillContent = convertCommandToSkill(sourceContent, cmd.skillName, cmd.displayName);
-    const destSkillDir = path.join(skillsDir, cmd.skillName);
-    await fse.ensureDir(destSkillDir);
-    await writeFile(path.join(destSkillDir, SKILL_MD_FILENAME), skillContent, "utf8");
-    return {
-        name: cmd.skillName,
-        source: "command",
-        relativePath: path.join(LISA_SKILLS_SUBDIR, cmd.skillName),
-    };
+function extractPreviousSkillNames(previousManagedFiles) {
+    const prefix = `${LISA_SKILLS_SUBDIR}${path.sep}`;
+    return Array.from(new Set(previousManagedFiles
+        .filter(file => file.startsWith(prefix))
+        .map(file => file.slice(prefix.length).split(path.sep)[0])
+        .filter((name) => Boolean(name) && name !== "SKILL.md")));
 }
 //# sourceMappingURL=skills-installer.js.map

package/dist/codex/skills-installer.js.map

@@ -1 +1 @@
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+{"version":3,"file":"skills-installer.js","sourceRoot":"","sources":["../../src/codex/skills-installer.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AACH,OAAO,EAAE,EAAE,EAAE,MAAM,kBAAkB,CAAC;AACtC,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAClC,OAAO,EACL,qBAAqB,EACrB,iBAAiB,GAClB,MAAM,+BAA+B,CAAC;AAEvC,OAAO,EACL,mBAAmB,EACnB,wBAAwB,GACzB,MAAM,kCAAkC,CAAC;AAE1C,OAAO,EAAE,qBAAqB,EAAE,MAAM,gCAAgC,CAAC;AACvE,OAAO,EAAE,yBAAyB,EAAE,MAAM,+BAA+B,CAAC;AAE1E,iEAAiE;AACjE,MAAM,CAAC,MAAM,kBAAkB,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC;AAE9D,4DAA4D;AAC5D,MAAM,qBAAqB,GAAG,cAAc,CAAC;AAC7C,MAAM,yCAAyC,GAAG,IAAI,CAAC,IAAI,CACzD,SAAS,EACT,kCAAkC,CACnC,CAAC;AAkBF;;;;;;;;GAQG;AACH,MAAM,CAAC,KAAK,UAAU,aAAa,CACjC,OAAe,EACf,OAAe,EACf,oBAAuC,EACvC,gBAAwC,EAAE;IAE1C,MAAM,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;IAC9C,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,kBAAkB,CAAC,CAAC;IAC1D,MAAM,eAAe,GAAG,MAAM,wBAAwB,CACpD,OAAO,EACP,aAAa,CACd,CAAC;IACF,MAAM,gBAAgB,GAAG,MAAM,iBAAiB,CAC9C,OAAO,EACP,yCAAyC,CAC1C,CAAC;IACF,MAAM,OAAO,GAAG,MAAM,qBAAqB,CACzC,OAAO,EACP,gBAAgB,EAChB,mBAAmB,CAAC,eAAe,CAAC,CACrC,CAAC;IAEF,MAAM,aAAa,GAAG,yBAAyB,CAAC,oBAAoB,CAAC,CAAC;IACtE,MAAM,OAAO,GAAG,CAAC,GAAG,aAAa,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CACtD,IAAI,CAAC,aAAa,CAAC,KAAK,CAAC,CAC1B,CAAC;IAEF,MAAM,OAAO,CAAC,GAAG,CAAC;QAChB,EAAE,CAAC,SAAS,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;QAC/C,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,qBAAqB,CAAC,EAAE;YAC7C,KAAK,EAAE,IAAI;YACX,SAAS,EAAE,IAAI;SAChB,CAAC;KACH,CAAC,CAAC;IACH,MAAM,SAAS,GAAG,OAAO,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;QACvC,IAAI,EAAE,MAAM,CAAC,SAAS;QACtB,MAAM,EAAE,SAAkB;QAC1B,YAAY,EAAE,IAAI,CAAC,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC,SAAS,CAAC;KACvD,CAAC,CAAC,CAAC;IAEJ,OAAO;QACL,SAAS,EAAE,MAAM,CAAC,MAAM,CAAC,SAAS,CAAC;QACnC,YAAY,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC;QAC/B,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,OAAO,CAAC;QAC/B,YAAY,EAAE,SAAS,CAAC,MAAM;KAC/B,CAAC;AACJ,CAAC;AAED;;;;GAIG;AACH,SAAS,yBAAyB,CAChC,oBAAuC;IAEvC,MAAM,MAAM,GAAG,GAAG,kBAAkB,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC;IAClD,OAAO,KAAK,CAAC,IAAI,CACf,IAAI,GAAG,CACL,oBAAoB;SACjB,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,UAAU,CAAC,MAAM,CAAC,CAAC;SACvC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,KAAK,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;SACzD,MAAM,CAAC,CAAC,IAAI,EAAkB,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC,IAAI,IAAI,KAAK,UAAU,CAAC,CAC1E,CACF,CAAC;AACJ,CAAC"}

package/dist/core/lisa-plugin-selection.d.ts

@@ -0,0 +1,16 @@
+import type { ProjectType } from "./config.js";
+/**
+ * Select exactly the Lisa plugin source directories applicable to a project.
+ * @param destDir Host project root.
+ * @param detectedTypes Expanded, ordered project types.
+ * @returns Stable set containing base, detected stacks, and configured features.
+ */
+export declare function selectProjectLisaPlugins(destDir: string, detectedTypes: readonly ProjectType[]): Promise<ReadonlySet<string>>;
+/**
+ * Build a discovery predicate from an already-selected project plugin set.
+ * Harness fan-out variants and unrelated canonical stacks both fail closed.
+ * @param selectedPlugins Canonical plugin directory names for the project.
+ * @returns Predicate suitable for skill/agent discovery.
+ */
+export declare function projectPluginFilter(selectedPlugins: ReadonlySet<string>): (pluginName: string) => boolean;
+//# sourceMappingURL=lisa-plugin-selection.d.ts.map

package/dist/core/lisa-plugin-selection.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"lisa-plugin-selection.d.ts","sourceRoot":"","sources":["../../src/core/lisa-plugin-selection.ts"],"names":[],"mappings":"AAWA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AA2B/C;;;;;GAKG;AACH,wBAAsB,wBAAwB,CAC5C,OAAO,EAAE,MAAM,EACf,aAAa,EAAE,SAAS,WAAW,EAAE,GACpC,OAAO,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAiB9B;AAED;;;;;GAKG;AACH,wBAAgB,mBAAmB,CACjC,eAAe,EAAE,WAAW,CAAC,MAAM,CAAC,GACnC,CAAC,UAAU,EAAE,MAAM,KAAK,OAAO,CAEjC"}

package/dist/core/lisa-plugin-selection.js

@@ -0,0 +1,59 @@
+/**
+ * Select the Lisa plugin sources that belong to one host project.
+ *
+ * Codex consumes Lisa through project-local overlays, so source discovery must
+ * never walk every built plugin. The base plugin is universal within a
+ * Lisa-managed project; stack plugins follow detected project types; standalone
+ * wiki/OpenClaw plugins follow explicit project configuration.
+ * @module core/lisa-plugin-selection
+ */
+import * as fse from "fs-extra";
+import * as path from "node:path";
+/** Lisa plugins that are selected by explicit project configuration. */
+const STANDALONE_PLUGIN_CONFIG_KEYS = {
+    openclaw: "lisa-openclaw",
+    wiki: "lisa-wiki",
+};
+/**
+ * Read project configuration without making a missing or malformed optional
+ * file fatal to Codex emission.
+ * @param destDir Host project root.
+ * @returns Parsed project configuration, or an empty object.
+ */
+async function readProjectConfig(destDir) {
+    try {
+        return (await fse.readJson(path.join(destDir, ".lisa.config.json")));
+    }
+    catch {
+        return {};
+    }
+}
+/**
+ * Select exactly the Lisa plugin source directories applicable to a project.
+ * @param destDir Host project root.
+ * @param detectedTypes Expanded, ordered project types.
+ * @returns Stable set containing base, detected stacks, and configured features.
+ */
+export async function selectProjectLisaPlugins(destDir, detectedTypes) {
+    const config = await readProjectConfig(destDir);
+    const configuredStandalonePlugins = Object.entries(STANDALONE_PLUGIN_CONFIG_KEYS)
+        .filter(([configKey]) => config[configKey] !== undefined)
+        .map(([, pluginName]) => pluginName);
+    const hasLocalWiki = await fse.pathExists(path.join(destDir, "wiki", "lisa-wiki.config.json"));
+    return new Set([
+        "lisa",
+        ...detectedTypes.map(type => `lisa-${type}`),
+        ...configuredStandalonePlugins,
+        ...(hasLocalWiki ? [STANDALONE_PLUGIN_CONFIG_KEYS.wiki] : []),
+    ]);
+}
+/**
+ * Build a discovery predicate from an already-selected project plugin set.
+ * Harness fan-out variants and unrelated canonical stacks both fail closed.
+ * @param selectedPlugins Canonical plugin directory names for the project.
+ * @returns Predicate suitable for skill/agent discovery.
+ */
+export function projectPluginFilter(selectedPlugins) {
+    return pluginName => selectedPlugins.has(pluginName);
+}
+//# sourceMappingURL=lisa-plugin-selection.js.map

package/dist/core/lisa-plugin-selection.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"lisa-plugin-selection.js","sourceRoot":"","sources":["../../src/core/lisa-plugin-selection.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AACH,OAAO,KAAK,GAAG,MAAM,UAAU,CAAC;AAChC,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAGlC,wEAAwE;AACxE,MAAM,6BAA6B,GAAG;IACpC,QAAQ,EAAE,eAAe;IACzB,IAAI,EAAE,WAAW;CACT,CAAC;AAKX;;;;;GAKG;AACH,KAAK,UAAU,iBAAiB,CAAC,OAAe;IAC9C,IAAI,CAAC;QACH,OAAO,CAAC,MAAM,GAAG,CAAC,QAAQ,CACxB,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,mBAAmB,CAAC,CACxC,CAAsB,CAAC;IAC1B,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,EAAE,CAAC;IACZ,CAAC;AACH,CAAC;AAED;;;;;GAKG;AACH,MAAM,CAAC,KAAK,UAAU,wBAAwB,CAC5C,OAAe,EACf,aAAqC;IAErC,MAAM,MAAM,GAAG,MAAM,iBAAiB,CAAC,OAAO,CAAC,CAAC;IAChD,MAAM,2BAA2B,GAAG,MAAM,CAAC,OAAO,CAChD,6BAA6B,CAC9B;SACE,MAAM,CAAC,CAAC,CAAC,SAAS,CAAC,EAAE,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,KAAK,SAAS,CAAC;SACxD,GAAG,CAAC,CAAC,CAAC,EAAE,UAAU,CAAC,EAAE,EAAE,CAAC,UAAU,CAAC,CAAC;IACvC,MAAM,YAAY,GAAG,MAAM,GAAG,CAAC,UAAU,CACvC,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,MAAM,EAAE,uBAAuB,CAAC,CACpD,CAAC;IAEF,OAAO,IAAI,GAAG,CAAC;QACb,MAAM;QACN,GAAG,aAAa,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,QAAQ,IAAI,EAAE,CAAC;QAC5C,GAAG,2BAA2B;QAC9B,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,6BAA6B,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;KAC9D,CAAC,CAAC;AACL,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,mBAAmB,CACjC,eAAoC;IAEpC,OAAO,UAAU,CAAC,EAAE,CAAC,eAAe,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;AACvD,CAAC"}

package/dist/core/lisa-rules-mirror.d.ts

@@ -6,7 +6,8 @@ import type { ProjectType } from "./config.js";
  * @param lisaDir - Absolute path to the Lisa repo / installed package.
  * @param rulesDestDir - Absolute path to the harness-owned rules directory.
  * @param detectedTypes - Project types Lisa detected for the host.
+ * @param mode Whether to copy or link source rules.
  * @returns Relative paths (subdir/file or file) of every rule .md file copied.
  */
-export declare function mirrorLisaRules(lisaDir: string, rulesDestDir: string, detectedTypes: readonly ProjectType[]): Promise<readonly string[]>;
+export declare function mirrorLisaRules(lisaDir: string, rulesDestDir: string, detectedTypes: readonly ProjectType[], mode?: "copy" | "link"): Promise<readonly string[]>;
 //# sourceMappingURL=lisa-rules-mirror.d.ts.map

package/dist/core/lisa-rules-mirror.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"lisa-rules-mirror.d.ts","sourceRoot":"","sources":["../../src/core/lisa-rules-mirror.ts"],"names":[],"mappings":"AAcA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAW/C;;;;;;;;GAQG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,MAAM,EACf,YAAY,EAAE,MAAM,EACpB,aAAa,EAAE,SAAS,WAAW,EAAE,GACpC,OAAO,CAAC,SAAS,MAAM,EAAE,CAAC,CA+D5B"}
+{"version":3,"file":"lisa-rules-mirror.d.ts","sourceRoot":"","sources":["../../src/core/lisa-rules-mirror.ts"],"names":[],"mappings":"AAcA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAW/C;;;;;;;;;GASG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,MAAM,EACf,YAAY,EAAE,MAAM,EACpB,aAAa,EAAE,SAAS,WAAW,EAAE,EACrC,IAAI,GAAE,MAAM,GAAG,MAAe,GAC7B,OAAO,CAAC,SAAS,MAAM,EAAE,CAAC,CA6D5B"}

package/dist/core/lisa-rules-mirror.js

@@ -10,7 +10,7 @@
  * @module core/lisa-rules-mirror
  */
 import * as fse from "fs-extra";
-import { copyFile, readdir } from "node:fs/promises";
+import { copyFile, readdir, rm, symlink } from "node:fs/promises";
 import * as path from "node:path";
 /** Subdirectories under each plugin's rules/ that carry rule .md files. */
 const RULE_SUBDIRS = ["eager", "reference"];
@@ -21,9 +21,10 @@ const RULE_SUBDIRS = ["eager", "reference"];
  * @param lisaDir - Absolute path to the Lisa repo / installed package.
  * @param rulesDestDir - Absolute path to the harness-owned rules directory.
  * @param detectedTypes - Project types Lisa detected for the host.
+ * @param mode Whether to copy or link source rules.
  * @returns Relative paths (subdir/file or file) of every rule .md file copied.
  */
-export async function mirrorLisaRules(lisaDir, rulesDestDir, detectedTypes) {
+export async function mirrorLisaRules(lisaDir, rulesDestDir, detectedTypes, mode = "copy") {
     const pluginNames = ["lisa", ...detectedTypes.map(type => `lisa-${type}`)];
     const filesByPlugin = await Promise.all(pluginNames.map(async (pluginName) => {
         const rulesRoot = path.join(lisaDir, "plugins", pluginName, "rules");
@@ -56,7 +57,22 @@ export async function mirrorLisaRules(lisaDir, rulesDestDir, detectedTypes) {
         throw new Error(`Duplicate Lisa rule path "${duplicate ?? "unknown"}" across plugin rules/ directories`);
     }
     await Promise.all(RULE_SUBDIRS.map(sub => fse.ensureDir(path.join(rulesDestDir, sub))));
-    await Promise.all(filesByPlugin.flatMap(({ entries }) => entries.map(entry => copyFile(entry.absSource, path.join(rulesDestDir, entry.relPath)))));
+    await Promise.all(filesByPlugin.flatMap(({ entries }) => entries.map(entry => mirrorRule(entry, rulesDestDir, mode))));
     return Object.freeze(allRelPaths);
 }
+/**
+ * Copy or link one rule while replacing an older managed representation.
+ * @param entry Source and relative destination.
+ * @param rulesDestDir Harness-owned rules root.
+ * @param mode Whether to copy or link.
+ */
+async function mirrorRule(entry, rulesDestDir, mode) {
+    const destination = path.join(rulesDestDir, entry.relPath);
+    await rm(destination, { force: true });
+    if (mode === "copy") {
+        await copyFile(entry.absSource, destination);
+        return;
+    }
+    await symlink(entry.absSource, destination, process.platform === "win32" ? "file" : undefined);
+}
 //# sourceMappingURL=lisa-rules-mirror.js.map

package/dist/core/lisa-rules-mirror.js.map

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+{"version":3,"file":"lisa-rules-mirror.js","sourceRoot":"","sources":["../../src/core/lisa-rules-mirror.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AACH,OAAO,KAAK,GAAG,MAAM,UAAU,CAAC;AAChC,OAAO,EAAE,QAAQ,EAAE,OAAO,EAAE,EAAE,EAAE,OAAO,EAAE,MAAM,kBAAkB,CAAC;AAClE,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAGlC,2EAA2E;AAC3E,MAAM,YAAY,GAAG,CAAC,OAAO,EAAE,WAAW,CAAU,CAAC;AAQrD;;;;;;;;;GASG;AACH,MAAM,CAAC,KAAK,UAAU,eAAe,CACnC,OAAe,EACf,YAAoB,EACpB,aAAqC,EACrC,OAAwB,MAAM;IAE9B,MAAM,WAAW,GAAG,CAAC,MAAM,EAAE,GAAG,aAAa,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,QAAQ,IAAI,EAAE,CAAC,CAAC,CAAC;IAE3E,MAAM,aAAa,GAAG,MAAM,OAAO,CAAC,GAAG,CACrC,WAAW,CAAC,GAAG,CAAC,KAAK,EAAC,UAAU,EAAC,EAAE;QACjC,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,SAAS,EAAE,UAAU,EAAE,OAAO,CAAC,CAAC;QACrE,IAAI,CAAC,CAAC,MAAM,GAAG,CAAC,UAAU,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC;YACvC,OAAO,EAAE,OAAO,EAAE,EAA8B,EAAE,CAAC;QACrD,CAAC;QAED,MAAM,kBAAkB,GAAG,MAAM,OAAO,CAAC,GAAG,CAC1C,YAAY,CAAC,GAAG,CAAC,KAAK,EAAC,GAAG,EAAC,EAAE;YAC3B,MAAM,MAAM,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,GAAG,CAAC,CAAC;YACzC,IAAI,CAAC,CAAC,MAAM,GAAG,CAAC,UAAU,CAAC,MAAM,CAAC,CAAC,EAAE,CAAC;gBACpC,OAAO,EAA8B,CAAC;YACxC,CAAC;YACD,MAAM,QAAQ,GAAG,CAAC,MAAM,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE,CACrD,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,CACrB,CAAC;YACF,OAAO,QAAQ,CAAC,GAAG,CAAgB,IAAI,CAAC,EAAE,CAAC,CAAC;gBAC1C,SAAS,EAAE,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE,IAAI,CAAC;gBAClC,OAAO,EAAE,IAAI,CAAC,IAAI,CAAC,GAAG,EAAE,IAAI,CAAC;aAC9B,CAAC,CAAC,CAAC;QACN,CAAC,CAAC,CACH,CAAC;QAEF,MAAM,YAAY,GAAG,MAAM,OAAO,CAAC,SAAS,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;QACvE,MAAM,WAAW,GAA6B,YAAY;aACvD,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,MAAM,EAAE,IAAI,CAAC,CAAC,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC;aACjD,GAAG,CAAgB,CAAC,CAAC,EAAE,CAAC,CAAC;YACxB,SAAS,EAAE,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,CAAC;YACvC,OAAO,EAAE,CAAC,CAAC,IAAI;SAChB,CAAC,CAAC,CAAC;QAEN,OAAO,EAAE,OAAO,EAAE,CAAC,GAAG,kBAAkB,CAAC,IAAI,EAAE,EAAE,GAAG,WAAW,CAAC,EAAE,CAAC;IACrE,CAAC,CAAC,CACH,CAAC;IAEF,MAAM,WAAW,GAAG,aAAa,CAAC,OAAO,CAAC,CAAC,EAAE,OAAO,EAAE,EAAE,EAAE,CACxD,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,CAC5B,CAAC;IACF,IAAI,IAAI,GAAG,CAAC,WAAW,CAAC,CAAC,IAAI,KAAK,WAAW,CAAC,MAAM,EAAE,CAAC;QACrD,MAAM,SAAS,GAAG,WAAW,CAAC,IAAI,CAChC,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,WAAW,CAAC,OAAO,CAAC,IAAI,CAAC,KAAK,KAAK,CACrD,CAAC;QACF,MAAM,IAAI,KAAK,CACb,6BAA6B,SAAS,IAAI,SAAS,oCAAoC,CACxF,CAAC;IACJ,CAAC;IAED,MAAM,OAAO,CAAC,GAAG,CACf,YAAY,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,SAAS,CAAC,IAAI,CAAC,IAAI,CAAC,YAAY,EAAE,GAAG,CAAC,CAAC,CAAC,CACrE,CAAC;IAEF,MAAM,OAAO,CAAC,GAAG,CACf,aAAa,CAAC,OAAO,CAAC,CAAC,EAAE,OAAO,EAAE,EAAE,EAAE,CACpC,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,UAAU,CAAC,KAAK,EAAE,YAAY,EAAE,IAAI,CAAC,CAAC,CAC5D,CACF,CAAC;IAEF,OAAO,MAAM,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC;AACpC,CAAC;AAED;;;;;GAKG;AACH,KAAK,UAAU,UAAU,CACvB,KAAoB,EACpB,YAAoB,EACpB,IAAqB;IAErB,MAAM,WAAW,GAAG,IAAI,CAAC,IAAI,CAAC,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC;IAC3D,MAAM,EAAE,CAAC,WAAW,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC;IACvC,IAAI,IAAI,KAAK,MAAM,EAAE,CAAC;QACpB,MAAM,QAAQ,CAAC,KAAK,CAAC,SAAS,EAAE,WAAW,CAAC,CAAC;QAC7C,OAAO;IACT,CAAC;IACD,MAAM,OAAO,CACX,KAAK,CAAC,SAAS,EACf,WAAW,EACX,OAAO,CAAC,QAAQ,KAAK,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,SAAS,CAClD,CAAC;AACJ,CAAC"}

package/dist/core/lisa-skill-sources.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"lisa-skill-sources.d.ts","sourceRoot":"","sources":["../../src/core/lisa-skill-sources.ts"],"names":[],"mappings":"AAsBA,8EAA8E;AAC9E,eAAO,MAAM,yBAAyB,UAAU,CAAC;AAEjD,6EAA6E;AAC7E,eAAO,MAAM,2BAA2B,UAAU,CAAC;AAEnD;;;;;;;;GAQG;AACH,eAAO,MAAM,+BAA+B,0CAIlC,CAAC;AAEX;;;;;GAKG;AACH,wBAAgB,sBAAsB,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAIlE;AAED;;;;GAIG;AACH,MAAM,MAAM,YAAY,GAAG,CAAC,UAAU,EAAE,MAAM,KAAK,OAAO,CAAC;AAE3D,uDAAuD;AACvD,MAAM,WAAW,kBAAkB;IACjC,4EAA4E;IAC5E,QAAQ,CAAC,SAAS,EAAE,MAAM,CAAC;IAC3B,gDAAgD;IAChD,QAAQ,CAAC,SAAS,EAAE,MAAM,CAAC;IAC3B,+DAA+D;IAC/D,QAAQ,CAAC,KAAK,EAAE,SAAS,MAAM,EAAE,CAAC;CACnC;AAED,qEAAqE;AACrE,MAAM,WAAW,iBAAiB;IAChC,qDAAqD;IACrD,QAAQ,CAAC,SAAS,EAAE,MAAM,CAAC;IAC3B,sDAAsD;IACtD,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;IAC5B,sEAAsE;IACtE,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC;CAC9B;AAED;;;;;;;;;GASG;AACH,wBAAsB,iBAAiB,CACrC,OAAO,EAAE,MAAM,EACf,kBAAkB,EAAE,MAAM,GACzB,OAAO,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAmB9B;AAED;;;;;;;;;;;;GAYG;AACH,wBAAsB,qBAAqB,CACzC,OAAO,EAAE,MAAM,EACf,gBAAgB,EAAE,WAAW,CAAC,MAAM,CAAC,EACrC,YAAY,CAAC,EAAE,YAAY,GAC1B,OAAO,CAAC,SAAS,kBAAkB,EAAE,CAAC,CAoBxC;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAsB,oBAAoB,CACxC,OAAO,EAAE,MAAM,EACf,YAAY,CAAC,EAAE,YAAY,GAC1B,OAAO,CAAC,SAAS,iBAAiB,EAAE,CAAC,CAgBvC;AAED;;;;;;;GAOG;AACH,wBAAgB,4BAA4B,CAC1C,QAAQ,EAAE,SAAS,MAAM,EAAE,GAC1B,SAAS,MAAM,EAAE,CAInB;AAED;;;;GAIG;AACH,wBAAgB,8BAA8B,CAC5C,QAAQ,EAAE,SAAS,MAAM,EAAE,GAC1B,MAAM,CAGR;AAED;;;;GAIG;AACH,wBAAgB,gCAAgC,CAC9C,QAAQ,EAAE,SAAS,MAAM,EAAE,GAC1B,MAAM,CAGR;AA6GD;;;;;GAKG;AACH,wBAAsB,kBAAkB,CACtC,IAAI,EAAE,MAAM,GACX,OAAO,CAAC,SAAS,MAAM,EAAE,CAAC,CAE5B"}

package/dist/core/lisa-skill-sources.js

@@ -184,7 +184,22 @@ async function orderedPluginNames(pluginsDir, pluginFilter) {
  * @returns Bundled-skill sources discovered in this plugin (file order).
  */
 async function discoverSkillsInPlugin(pluginsDir, pluginName) {
-    const skillsDir = path.join(pluginsDir, pluginName, "skills");
+    const pluginDir = path.join(pluginsDir, pluginName);
+    const skillRoots = [
+        path.join(pluginDir, "skills"),
+        path.join(pluginDir, ".codex-plugin", "skills"),
+    ];
+    const candidatesByRoot = await Promise.all(skillRoots.map(skillsDir => discoverSkillsInRoot(skillsDir)));
+    return candidatesByRoot.flat();
+}
+/**
+ * Discover skill directories under one concrete skill root. Codex-specific
+ * command-derived skills live under `.codex-plugin/skills/`; authored skills
+ * remain in the plugin's standard `skills/` directory.
+ * @param skillsDir Absolute skill root.
+ * @returns Skill sources under that root.
+ */
+async function discoverSkillsInRoot(skillsDir) {
     if (!(await fse.pathExists(skillsDir))) {
         return [];
     }