@codeyam/codeyam-cli 0.1.0-staging.bbe4da9 → 0.1.0-staging.c9dc00c

package/codeyam-cli/scripts/apply-setup.js

@@ -11,13 +11,14 @@
  * 3. Writes .codeyam/config.json
  * 4. Copies universal mock files to .codeyam/universal-mocks/
  * 5. Creates/updates SQLite database with project metadata
+ * 6. Sets up Claude memory infrastructure (CLAUDE.md section, rules instructions, pre-commit hook)
  */
 import * as fs from 'fs';
 import * as path from 'path';
 import { fileURLToPath } from 'url';
 import { parseArgs } from 'util';
 import { randomUUID } from 'crypto';
-import { getSqliteDatabase, createSqliteSchema, upsertProjects, upsertBranches, loadBranches, } from "../../packages/supabase/index.js";
+import { getSqliteDatabase, createSqliteSchema, upsertProjects, upsertBranches, loadBranches, } from "../../packages/database/index.js";
 const __filename = fileURLToPath(import.meta.url);
 const __dirname = path.dirname(__filename);
 async function main() {
@@ -228,11 +229,190 @@ async function main() {
     finally {
         await db.destroy();
     }
+    // Setup Claude memory infrastructure (only for codeyam project)
+    if (projectName === 'codeyam') {
+        await setupMemoryInfrastructure(targetPath, __dirname);
+    }
     console.log('\nSetup complete!');
     console.log(`\nNext steps:`);
     console.log(`  cd ${targetPath}`);
     console.log(`  codeyam start`);
 }
+/**
+ * Setup Claude memory infrastructure (from codeyam:memory Phase 1)
+ * This sets up everything except creating new rules.
+ */
+async function setupMemoryInfrastructure(targetPath, scriptDir) {
+    const templatesDir = path.join(scriptDir, '..', 'templates');
+    const codeyamDir = path.join(targetPath, '.codeyam');
+    const claudeDir = path.join(targetPath, '.claude');
+    console.log('\n6. Setting up Claude memory infrastructure...');
+    // 6A: Add "When Confused / With Mistakes" section to CLAUDE.md
+    const claudeMdPath = path.join(targetPath, 'CLAUDE.md');
+    const confusionSection = `## Continuous Documentation
+
+As you work, think about any information that might be helpful to know in future work sessions without the user re-providing the information.
+
+This might include
+- High-level architecture for complex areas of the codebase (if not obvious)
+- Specific commands that are recommended
+- Debugging strategies for complex areas of the codebase (if not obvious)
+- Anything confusing that is encountered in the work session
+
+### Documenting Confusion / Mistakes
+
+It is very important to document any tribal knowledge, complex architectural decisions, and any confusion or mistakes you encounter in Claude Rules (\`.claude/rules\`).
+Please see \`.codeyam/rules/instructions.md\` for guidance.
+`;
+    if (fs.existsSync(claudeMdPath)) {
+        const claudeMdContent = await fs.promises.readFile(claudeMdPath, 'utf-8');
+        if (!claudeMdContent.includes('Documenting Confusion / Mistakes')) {
+            // Find a good insertion point - after the first heading or at the top
+            const lines = claudeMdContent.split('\n');
+            let insertIndex = 0;
+            // Find the first ## heading (skip the title)
+            for (let i = 0; i < lines.length; i++) {
+                if (lines[i].startsWith('# ')) {
+                    insertIndex = i + 1;
+                    // Skip any blank lines after the title
+                    while (insertIndex < lines.length && lines[insertIndex].trim() === '')
+                        insertIndex++;
+                    break;
+                }
+            }
+            const newContent = lines.slice(0, insertIndex).join('\n') +
+                '\n' +
+                confusionSection +
+                '\n' +
+                lines.slice(insertIndex).join('\n');
+            await fs.promises.writeFile(claudeMdPath, newContent, 'utf-8');
+            console.log('   Added "When Confused / With Mistakes" section to CLAUDE.md');
+        }
+        else {
+            console.log('   CLAUDE.md already has confusion section');
+        }
+    }
+    else {
+        // Create CLAUDE.md with the section
+        const newClaudeMd = `# Project\n\n${confusionSection}`;
+        await fs.promises.writeFile(claudeMdPath, newClaudeMd, 'utf-8');
+        console.log('   Created CLAUDE.md with confusion section');
+    }
+    // 6B: Copy rules instructions to .codeyam/rules/instructions.md
+    const rulesDir = path.join(codeyamDir, 'rules');
+    const instructionsPath = path.join(rulesDir, 'instructions.md');
+    const templateInstructionsPath = path.join(templatesDir, 'rules-instructions.md');
+    await fs.promises.mkdir(rulesDir, { recursive: true });
+    if (fs.existsSync(templateInstructionsPath)) {
+        await fs.promises.copyFile(templateInstructionsPath, instructionsPath);
+        console.log('   Copied rules instructions to .codeyam/rules/instructions.md');
+    }
+    else {
+        console.log('   Warning: rules-instructions.md template not found');
+    }
+    // 6C: Setup pre-commit hook
+    const binDir = path.join(codeyamDir, 'bin');
+    const memoryHookPath = path.join(binDir, 'memory-hook.sh');
+    const templateHookPath = path.join(templatesDir, 'codeyam-memory-hook.sh');
+    await fs.promises.mkdir(binDir, { recursive: true });
+    // Copy memory-hook.sh if template exists
+    if (fs.existsSync(templateHookPath)) {
+        await fs.promises.copyFile(templateHookPath, memoryHookPath);
+        await fs.promises.chmod(memoryHookPath, 0o755);
+        console.log('   Copied memory-hook.sh to .codeyam/bin/');
+    }
+    else {
+        console.log('   Warning: memory-hook.sh template not found');
+    }
+    // Copy rule-reflection-hook.py if template exists
+    const ruleReflectionHookPath = path.join(binDir, 'rule-reflection-hook.py');
+    const templateRuleReflectionHookPath = path.join(templatesDir, 'rule-reflection-hook.py');
+    if (fs.existsSync(templateRuleReflectionHookPath)) {
+        await fs.promises.copyFile(templateRuleReflectionHookPath, ruleReflectionHookPath);
+        await fs.promises.chmod(ruleReflectionHookPath, 0o755);
+        console.log('   Copied rule-reflection-hook.py to .codeyam/bin/');
+    }
+    else {
+        console.log('   Warning: rule-reflection-hook.py template not found');
+    }
+    // Copy rule-notification-hook.py if template exists
+    const ruleNotificationHookPath = path.join(binDir, 'rule-notification-hook.py');
+    const templateRuleNotificationHookPath = path.join(templatesDir, 'rule-notification-hook.py');
+    if (fs.existsSync(templateRuleNotificationHookPath)) {
+        await fs.promises.copyFile(templateRuleNotificationHookPath, ruleNotificationHookPath);
+        await fs.promises.chmod(ruleNotificationHookPath, 0o755);
+        console.log('   Copied rule-notification-hook.py to .codeyam/bin/');
+    }
+    else {
+        console.log('   Warning: rule-notification-hook.py template not found');
+    }
+    // Copy prompt templates to .codeyam/bin/prompts/
+    const promptsSrcDir = path.join(templatesDir, 'prompts');
+    const promptsDestDir = path.join(binDir, 'prompts');
+    if (fs.existsSync(promptsSrcDir)) {
+        await fs.promises.mkdir(promptsDestDir, { recursive: true });
+        const promptFiles = fs.readdirSync(promptsSrcDir);
+        for (const file of promptFiles) {
+            await fs.promises.copyFile(path.join(promptsSrcDir, file), path.join(promptsDestDir, file));
+        }
+        console.log('   Copied prompt templates to .codeyam/bin/prompts/');
+    }
+    // Setup pre-commit hook (Husky or .git/hooks)
+    const huskyDir = path.join(targetPath, '.husky');
+    const gitHooksDir = path.join(targetPath, '.git', 'hooks');
+    const hookContent = `
+# CodeYam Memory Up-To-Date Check
+if [ -f ".codeyam/bin/memory-hook.sh" ]; then
+  .codeyam/bin/memory-hook.sh
+fi
+`;
+    if (fs.existsSync(huskyDir)) {
+        // Using Husky
+        const huskyPreCommitPath = path.join(huskyDir, 'pre-commit');
+        if (fs.existsSync(huskyPreCommitPath)) {
+            const existingContent = await fs.promises.readFile(huskyPreCommitPath, 'utf-8');
+            if (!existingContent.includes('memory-hook.sh')) {
+                await fs.promises.appendFile(huskyPreCommitPath, hookContent);
+                console.log('   Appended memory hook to .husky/pre-commit');
+            }
+            else {
+                console.log('   Husky pre-commit already has memory hook');
+            }
+        }
+        else {
+            // Create the husky pre-commit file
+            await fs.promises.writeFile(huskyPreCommitPath, `#!/bin/sh\n${hookContent}`, 'utf-8');
+            await fs.promises.chmod(huskyPreCommitPath, 0o755);
+            console.log('   Created .husky/pre-commit with memory hook');
+        }
+    }
+    else if (fs.existsSync(gitHooksDir)) {
+        // Using .git/hooks directly
+        const gitPreCommitPath = path.join(gitHooksDir, 'pre-commit');
+        if (fs.existsSync(gitPreCommitPath)) {
+            const existingContent = await fs.promises.readFile(gitPreCommitPath, 'utf-8');
+            if (!existingContent.includes('memory-hook.sh')) {
+                await fs.promises.appendFile(gitPreCommitPath, hookContent);
+                console.log('   Appended memory hook to .git/hooks/pre-commit');
+            }
+            else {
+                console.log('   .git/hooks/pre-commit already has memory hook');
+            }
+        }
+        else {
+            await fs.promises.writeFile(gitPreCommitPath, `#!/bin/sh\n${hookContent}`, 'utf-8');
+            await fs.promises.chmod(gitPreCommitPath, 0o755);
+            console.log('   Created .git/hooks/pre-commit with memory hook');
+        }
+    }
+    else {
+        console.log('   Warning: No .husky/ or .git/hooks/ directory found');
+    }
+    // 6D: Create .claude/rules directory if it doesn't exist
+    const claudeRulesDir = path.join(claudeDir, 'rules');
+    await fs.promises.mkdir(claudeRulesDir, { recursive: true });
+    console.log('   Ensured .claude/rules/ directory exists');
+}
 /**
  * Read mock files and merge content with fixture metadata
  */

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package/codeyam-cli/scripts/extract-setup.js

@@ -15,7 +15,7 @@ import * as fs from 'fs';
 import * as path from 'path';
 import { fileURLToPath } from 'url';
 import { parseArgs } from 'util';
-import { getSqliteDatabase } from "../../packages/supabase/index.js";
+import { getSqliteDatabase } from "../../packages/database/index.js";
 const __filename = fileURLToPath(import.meta.url);
 const __dirname = path.dirname(__filename);
 async function main() {

package/codeyam-cli/scripts/populateEntityTimestamps.js

@@ -1,4 +1,4 @@
-import { getDatabase } from "../../packages/supabase/src/lib/kysely/db.js";
+import { getDatabase } from "../../packages/database/src/lib/kysely/db.js/index.js";
 import { statSync } from 'fs';
 async function populateEntityTimestamps() {
     console.log('🕐 Starting to populate entity timestamps...');

package/codeyam-cli/scripts/populateEntityTimestamps.js.map

@@ -1 +1 @@
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+{"version":3,"file":"populateEntityTimestamps.js","sourceRoot":"","sources":["../../../scripts/populateEntityTimestamps.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,wCAAwC,CAAC;AACrE,OAAO,EAAE,QAAQ,EAAE,MAAM,IAAI,CAAC;AAE9B,KAAK,UAAU,wBAAwB;IACrC,OAAO,CAAC,GAAG,CAAC,8CAA8C,CAAC,CAAC;IAE5D,MAAM,EAAE,GAAG,WAAW,EAAE,CAAC;IAEzB,wCAAwC;IACxC,MAAM,yBAAyB,GAAG,MAAM,EAAE;SACvC,UAAU,CAAC,UAAU,CAAC;SACtB,MAAM,CAAC,CAAC,KAAK,EAAE,WAAW,EAAE,MAAM,EAAE,YAAY,CAAC,CAAC;SAClD,KAAK,CAAC,YAAY,EAAE,IAAI,EAAE,IAAI,CAAC;SAC/B,OAAO,EAAE,CAAC;IAEb,OAAO,CAAC,GAAG,CACT,YAAY,yBAAyB,CAAC,MAAM,8BAA8B,CAC3E,CAAC;IAEF,IAAI,yBAAyB,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAC3C,OAAO,CAAC,GAAG,CAAC,yCAAyC,CAAC,CAAC;QACvD,OAAO;IACT,CAAC;IAED,IAAI,OAAO,GAAG,CAAC,CAAC;IAChB,IAAI,MAAM,GAAG,CAAC,CAAC;IAEf,KAAK,MAAM,MAAM,IAAI,yBAAyB,EAAE,CAAC;QAC/C,IAAI,CAAC;YACH,IAAI,SAAiB,CAAC;YAEtB,IAAI,MAAM,CAAC,SAAS,EAAE,CAAC;gBACrB,oCAAoC;gBACpC,IAAI,CAAC;oBACH,MAAM,KAAK,GAAG,QAAQ,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;oBACzC,SAAS,GAAG,KAAK,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC;gBACxC,CAAC;gBAAC,OAAO,SAAS,EAAE,CAAC;oBACnB,4DAA4D;oBAC5D,OAAO,CAAC,IAAI,CACV,4BAA4B,MAAM,CAAC,SAAS,sBAAsB,CACnE,CAAC;oBACF,SAAS,GAAG,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC;gBACvC,CAAC;YACH,CAAC;iBAAM,CAAC;gBACN,iCAAiC;gBACjC,SAAS,GAAG,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC;YACvC,CAAC;YAED,oCAAoC;YACpC,MAAM,EAAE;iBACL,WAAW,CAAC,UAAU,CAAC;iBACvB,GAAG,CAAC,EAAE,UAAU,EAAE,SAAS,EAAE,CAAC;iBAC9B,KAAK,CAAC,KAAK,EAAE,GAAG,EAAE,MAAM,CAAC,GAAG,CAAC;iBAC7B,OAAO,EAAE,CAAC;YAEb,OAAO,EAAE,CAAC;YAEV,IAAI,OAAO,GAAG,GAAG,KAAK,CAAC,EAAE,CAAC;gBACxB,OAAO,CAAC,GAAG,CACT,cAAc,OAAO,IAAI,yBAAyB,CAAC,MAAM,cAAc,CACxE,CAAC;YACJ,CAAC;QACH,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YACf,OAAO,CAAC,KAAK,CACX,2BAA2B,MAAM,CAAC,GAAG,KAAK,MAAM,CAAC,IAAI,IAAI,EACzD,KAAK,CACN,CAAC;YACF,MAAM,EAAE,CAAC;QACX,CAAC;IACH,CAAC;IAED,OAAO,CAAC,GAAG,CAAC,oCAAoC,CAAC,CAAC;IAClD,OAAO,CAAC,GAAG,CACT,mCAAmC,yBAAyB,CAAC,MAAM,EAAE,CACtE,CAAC;IACF,OAAO,CAAC,GAAG,CAAC,8BAA8B,OAAO,EAAE,CAAC,CAAC;IACrD,OAAO,CAAC,GAAG,CAAC,gBAAgB,MAAM,EAAE,CAAC,CAAC;IAEtC,IAAI,OAAO,GAAG,CAAC,EAAE,CAAC;QAChB,OAAO,CAAC,GAAG,CACT,mGAAmG,CACpG,CAAC;IACJ,CAAC;AACH,CAAC;AAED,iBAAiB;AACjB,wBAAwB,EAAE;KACvB,IAAI,CAAC,GAAG,EAAE;IACT,OAAO,CAAC,GAAG,CAAC,kCAAkC,CAAC,CAAC;IAChD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC,CAAC;KACD,KAAK,CAAC,CAAC,KAAK,EAAE,EAAE;IACf,OAAO,CAAC,KAAK,CAAC,mBAAmB,EAAE,KAAK,CAAC,CAAC;IAC1C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC,CAAC,CAAC"}

package/codeyam-cli/src/cli.js

@@ -1,7 +1,7 @@
 #!/usr/bin/env node
 import yargs from 'yargs';
 import { hideBin } from 'yargs/helpers';
-import { installSignalHandlers } from "../../background/src/lib/process/index.js";
+import { installSignalHandlers } from "../../packages/process/index.js";
 // Command implementations
 import initCommand from "./commands/init.js";
 import analyzeCommand from "./commands/analyze.js";
@@ -21,7 +21,13 @@ import queueCommand from "./commands/queue.js";
 import validateMockCommand from "./commands/validate-mock.js";
 import reportCommand from "./commands/report.js";
 import debugCommand from "./commands/debug.js";
+import recaptureCommand from "./commands/recapture.js";
 import setupSandboxCommand from "./commands/setup-sandbox.js";
+import webappInfoCommand from "./commands/webapp-info.js";
+import wipeCommand from "./commands/wipe.js";
+import baselineCommand from "./commands/baseline.js";
+import memoryCommand from "./commands/memory.js";
+import setupSimulationsCommand from "./commands/setup-simulations.js";
 import { syncMocksMiddleware } from "./utils/syncMocksMiddleware.js";
 // Install global signal handlers for automatic process cleanup
 // This ensures all child processes (analyzer, capture, etc.) are cleaned up on:
@@ -54,8 +60,14 @@ yargs(hideBin(process.argv))
     .command(generateMocksCommand)
     .command(validateMockCommand)
     .command(debugCommand)
+    .command(recaptureCommand)
     .command(setupSandboxCommand)
+    .command(webappInfoCommand)
     .command(reportCommand)
+    .command(wipeCommand)
+    .command(baselineCommand)
+    .command(memoryCommand)
+    .command(setupSimulationsCommand)
     .demandCommand(1)
     .help()
     .alias('help', 'h')

package/codeyam-cli/src/cli.js.map

@@ -1 +1 @@
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+{"version":3,"file":"cli.js","sourceRoot":"","sources":["../../../src/cli.ts"],"names":[],"mappings":";AAEA,OAAO,KAAK,MAAM,OAAO,CAAC;AAC1B,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AACxC,OAAO,EAAE,qBAAqB,EAAE,MAAM,kBAAkB,CAAC;AACzD,0BAA0B;AAC1B,OAAO,WAAW,MAAM,iBAAiB,CAAC;AAC1C,OAAO,cAAc,MAAM,oBAAoB,CAAC;AAChD,OAAO,aAAa,MAAM,mBAAmB,CAAC;AAC9C,OAAO,WAAW,MAAM,iBAAiB,CAAC;AAC1C,OAAO,eAAe,MAAM,qBAAqB,CAAC;AAClD,OAAO,cAAc,MAAM,oBAAoB,CAAC;AAChD,OAAO,2BAA2B,MAAM,mCAAmC,CAAC;AAC5E,OAAO,kBAAkB,MAAM,yBAAyB,CAAC;AACzD,OAAO,YAAY,MAAM,kBAAkB,CAAC;AAC5C,OAAO,WAAW,MAAM,iBAAiB,CAAC;AAC1C,OAAO,cAAc,MAAM,oBAAoB,CAAC;AAChD,OAAO,mBAAmB,MAAM,0BAA0B,CAAC;AAC3D,OAAO,aAAa,MAAM,mBAAmB,CAAC;AAC9C,OAAO,oBAAoB,MAAM,oCAAoC,CAAC;AACtE,OAAO,YAAY,MAAM,kBAAkB,CAAC;AAC5C,OAAO,mBAAmB,MAAM,0BAA0B,CAAC;AAC3D,OAAO,aAAa,MAAM,mBAAmB,CAAC;AAC9C,OAAO,YAAY,MAAM,kBAAkB,CAAC;AAC5C,OAAO,gBAAgB,MAAM,sBAAsB,CAAC;AACpD,OAAO,mBAAmB,MAAM,0BAA0B,CAAC;AAC3D,OAAO,iBAAiB,MAAM,wBAAwB,CAAC;AACvD,OAAO,WAAW,MAAM,iBAAiB,CAAC;AAC1C,OAAO,eAAe,MAAM,qBAAqB,CAAC;AAClD,OAAO,aAAa,MAAM,mBAAmB,CAAC;AAC9C,OAAO,uBAAuB,MAAM,8BAA8B,CAAC;AACnE,OAAO,EAAE,mBAAmB,EAAE,MAAM,6BAA6B,CAAC;AAElE,+DAA+D;AAC/D,gFAAgF;AAChF,oBAAoB;AACpB,YAAY;AACZ,wBAAwB;AACxB,iCAAiC;AACjC,wBAAwB;AACxB,qBAAqB,EAAE,CAAC;AAExB,4BAA4B;AAC5B,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;KACzB,UAAU,CAAC,SAAS,CAAC;KACrB,OAAO,CAAC,OAAO,CAAC;KAChB,KAAK,CAAC,+BAA+B,CAAC;KACtC,UAAU,CAAC,mBAAmB,CAAC;KAC/B,OAAO,CAAC,cAAc,CAAC;KACvB,OAAO,CAAC,WAAW,CAAC;KACpB,OAAO,CAAC,cAAc,CAAC;KACvB,OAAO,CAAC,YAAY,CAAC;KACrB,OAAO,CAAC,aAAa,CAAC;KACtB,OAAO,CAAC,WAAW,CAAC;KACpB,OAAO,CAAC,eAAe,CAAC;KACxB,OAAO,CAAC,cAAc,CAAC;KACvB,OAAO,CAAC,2BAA2B,CAAC;KACpC,OAAO,CAAC,kBAAkB,CAAC;KAC3B,OAAO,CAAC,YAAY,CAAC;KACrB,OAAO,CAAC,WAAW,CAAC;KACpB,OAAO,CAAC,mBAAmB,CAAC;KAC5B,OAAO,CAAC,aAAa,CAAC;KACtB,OAAO,CAAC,oBAAoB,CAAC;KAC7B,OAAO,CAAC,mBAAmB,CAAC;KAC5B,OAAO,CAAC,YAAY,CAAC;KACrB,OAAO,CAAC,gBAAgB,CAAC;KACzB,OAAO,CAAC,mBAAmB,CAAC;KAC5B,OAAO,CAAC,iBAAiB,CAAC;KAC1B,OAAO,CAAC,aAAa,CAAC;KACtB,OAAO,CAAC,WAAW,CAAC;KACpB,OAAO,CAAC,eAAe,CAAC;KACxB,OAAO,CAAC,aAAa,CAAC;KACtB,OAAO,CAAC,uBAAuB,CAAC;KAChC,aAAa,CAAC,CAAC,CAAC;KAChB,IAAI,EAAE;KACN,KAAK,CAAC,MAAM,EAAE,GAAG,CAAC;KAClB,MAAM,EAAE;KACR,UAAU,EAAE;KACZ,KAAK,CAAC,CAAC,KAAK,EAAE,EAAE;IACf,OAAO,CAAC,KAAK,CAAC,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC;IAC3C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC,CAAC,CAAC"}

package/codeyam-cli/src/commands/analyze.js

@@ -5,7 +5,8 @@ import { error, header, info, ProgressReporter, success, } from "../utils/progre
 import { detectChangedFilePaths } from "../utils/changeDetection.js";
 import { getProjectRoot } from "../state.js";
 import { runAnalysisForEntities } from "../utils/analysisRunner.js";
-import { getGlobalProcessManager } from "../../../background/src/lib/process/index.js";
+import { getGlobalProcessManager } from "../../../packages/process/index.js";
+import { requireSimulations } from "../utils/requireSimulations.js";
 const analyzeCommand = {
     command: 'analyze [files...]',
     describe: 'Analyze local code changes before committing',
@@ -28,6 +29,7 @@ const analyzeCommand = {
         },
     },
     handler: async (argv) => {
+        requireSimulations();
         header('CodeYam Analysis');
         const progress = new ProgressReporter(false);
         // Find project root directory

package/codeyam-cli/src/commands/analyze.js.map

@@ -1 +1 @@
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package/codeyam-cli/src/commands/baseline.js

@@ -0,0 +1,176 @@
+import * as fs from 'fs';
+import * as path from 'path';
+import * as readline from 'readline';
+import { error, header, info, ProgressReporter, success, warn, withoutSpinner, } from "../utils/progress.js";
+import { testEnvironment, requireBranchAndProject, createBaselineCommit, } from "../utils/database.js";
+import { getWipeStats, wipeProject, formatWipeStats, hasExistingAnalyses, } from "../utils/wipe.js";
+import { checkGitClean, getHeadSha, isGitRepo } from "../utils/git.js";
+import { getProjectRoot } from "../state.js";
+import { startBackgroundServer } from "../utils/backgroundServer.js";
+import { requireSimulations } from "../utils/requireSimulations.js";
+/**
+ * Prompt user for confirmation.
+ */
+async function confirm(message) {
+    const rl = readline.createInterface({
+        input: process.stdin,
+        output: process.stdout,
+    });
+    return new Promise((resolve) => {
+        rl.question(`${message} [y/N] `, (answer) => {
+            rl.close();
+            resolve(answer.toLowerCase() === 'y' || answer.toLowerCase() === 'yes');
+        });
+    });
+}
+const baselineCommand = {
+    command: 'baseline',
+    describe: 'Run a complete baseline analysis of all entities in the repository',
+    builder: {
+        yes: {
+            type: 'boolean',
+            alias: 'y',
+            describe: 'Skip confirmation prompts',
+            default: false,
+        },
+    },
+    handler: async (argv) => {
+        requireSimulations();
+        header('CodeYam Baseline');
+        const progress = new ProgressReporter();
+        // Find project root directory
+        const projectRoot = getProjectRoot();
+        if (!projectRoot) {
+            error('Not in a CodeYam project. Run: codeyam init');
+            return;
+        }
+        const configPath = path.join(projectRoot, '.codeyam', 'config.json');
+        try {
+            // Check if we're in a git repo
+            if (!isGitRepo(projectRoot)) {
+                error('Not in a git repository. Baseline requires a git repository.');
+                return;
+            }
+            // Check git status - require clean working directory
+            progress.start('Checking git status...');
+            const gitStatus = checkGitClean(projectRoot);
+            if (!gitStatus.clean) {
+                progress.fail('Uncommitted changes detected');
+                console.log();
+                error('Baseline requires a clean git state.');
+                console.log();
+                info('Uncommitted files:');
+                for (const file of gitStatus.files.slice(0, 10)) {
+                    info(`  ${file}`);
+                }
+                if (gitStatus.files.length > 10) {
+                    info(`  ... and ${gitStatus.files.length - 10} more`);
+                }
+                console.log();
+                info('Options:');
+                info('  • Commit your changes: git commit -am "WIP"');
+                info('  • Stash your changes: git stash');
+                info('  • Or run regular analysis: codeyam analyze <files>');
+                return;
+            }
+            progress.succeed('Git working directory is clean');
+            // Get the real HEAD SHA
+            const headSha = getHeadSha(projectRoot);
+            info(`HEAD commit: ${headSha.substring(0, 8)}`);
+            // Load project configuration
+            progress.start('Loading project configuration...');
+            const config = JSON.parse(fs.readFileSync(configPath, 'utf8'));
+            const { projectSlug } = config;
+            if (!projectSlug) {
+                progress.fail('Invalid project configuration');
+                error('Missing project slug. Try reinitializing with: codeyam init --force');
+                return;
+            }
+            progress.succeed('Loaded project configuration');
+            // Test database connection
+            progress.start('Validating environment...');
+            const connectionOk = await withoutSpinner(() => testEnvironment());
+            if (!connectionOk) {
+                progress.fail('Environment validation failed');
+                return;
+            }
+            progress.succeed('Environment validated');
+            // Load project and branch
+            progress.start('Loading project...');
+            const { project, branch } = await requireBranchAndProject(projectSlug);
+            progress.succeed('Project loaded');
+            // Check for existing analyses
+            progress.start('Checking for existing analyses...');
+            const hasAnalyses = await hasExistingAnalyses(project.id);
+            progress.succeed('Analysis check complete');
+            if (hasAnalyses) {
+                const stats = await getWipeStats(project.id);
+                console.log();
+                warn('⚠️  Existing analyses found:');
+                console.log(formatWipeStats(stats));
+                console.log();
+                info('Running baseline will wipe all existing data and start fresh.');
+                console.log();
+                if (!argv.yes) {
+                    const confirmed = await confirm('Continue?');
+                    if (!confirmed) {
+                        info('Baseline cancelled');
+                        return;
+                    }
+                }
+                console.log();
+                // Execute wipe
+                progress.start('Wiping existing data...');
+                await wipeProject(project.id);
+                progress.succeed('Existing data wiped');
+            }
+            // Create baseline commit using real git SHA
+            progress.start('Creating baseline commit...');
+            const baselineCommit = await createBaselineCommit(project, branch, headSha);
+            progress.succeed(`Baseline commit created: ${headSha.substring(0, 8)}`);
+            // Start background server if not running (also handles version mismatch detection)
+            const { wasAlreadyRunning } = await startBackgroundServer({
+                port: 3111,
+                rootPath: projectRoot,
+                project,
+                branch,
+            });
+            if (!wasAlreadyRunning) {
+                progress.succeed('Background server started');
+            }
+            // Enqueue baseline job via HTTP
+            progress.start('Enqueuing baseline job...');
+            const response = await fetch('http://localhost:3111/api/queue', {
+                method: 'POST',
+                headers: { 'Content-Type': 'application/json' },
+                body: JSON.stringify({
+                    action: 'enqueue',
+                    type: 'baseline',
+                    projectSlug,
+                    commitSha: headSha,
+                }),
+            });
+            if (!response.ok) {
+                const text = await response.text();
+                throw new Error(`Failed to enqueue baseline job: ${text}`);
+            }
+            const result = await response.json();
+            progress.succeed('Baseline job enqueued');
+            console.log();
+            success('Baseline analysis started!');
+            console.log();
+            info('This may take a while depending on repository size.');
+            info('Monitor progress at: http://localhost:3111');
+            console.log();
+            info(`Job ID: ${result.jobId}`);
+            info('Run "codeyam status" to check progress');
+        }
+        catch (err) {
+            progress.fail('Baseline failed');
+            error(err.message);
+            process.exit(1);
+        }
+    },
+};
+export default baselineCommand;
+//# sourceMappingURL=baseline.js.map

package/codeyam-cli/src/commands/baseline.js.map

@@ -0,0 +1 @@
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