@codeyam/codeyam-cli 0.1.0-staging.596f0eb → 0.1.0-staging.62d4615

package/codeyam-cli/src/utils/rules/staleness.js

@@ -0,0 +1,137 @@
+// Staleness detection for Claude Rules
+import fs from 'fs/promises';
+import path from 'path';
+import { minimatch } from 'minimatch';
+import { getRuleTimestamp } from "./ruleState.js";
+/**
+ * Find all files matching glob patterns under a directory
+ */
+async function findMatchingFiles(patterns, projectRoot) {
+    const matches = [];
+    async function walkDir(dir, relativePath) {
+        try {
+            const entries = await fs.readdir(dir, { withFileTypes: true });
+            for (const entry of entries) {
+                const fullPath = path.join(dir, entry.name);
+                const relPath = relativePath
+                    ? `${relativePath}/${entry.name}`
+                    : entry.name;
+                // Skip common non-source directories
+                if (entry.isDirectory() &&
+                    (entry.name === 'node_modules' ||
+                        entry.name === '.git' ||
+                        entry.name === 'dist' ||
+                        entry.name === '.codeyam' ||
+                        entry.name === '.claude')) {
+                    continue;
+                }
+                if (entry.isDirectory()) {
+                    await walkDir(fullPath, relPath);
+                }
+                else if (entry.isFile()) {
+                    // Check if file matches any pattern
+                    for (const pattern of patterns) {
+                        if (minimatch(relPath, pattern, { matchBase: true })) {
+                            matches.push(relPath);
+                            break;
+                        }
+                    }
+                }
+            }
+        }
+        catch {
+            // Directory not readable, skip
+        }
+    }
+    await walkDir(projectRoot, '');
+    return matches;
+}
+/**
+ * Get the most recent modification time from a list of files
+ */
+async function getNewestFileTime(files, projectRoot) {
+    let newestTime = null;
+    let newestPath = null;
+    for (const file of files) {
+        try {
+            const stat = await fs.stat(path.join(projectRoot, file));
+            if (!newestTime || stat.mtime > newestTime) {
+                newestTime = stat.mtime;
+                newestPath = file;
+            }
+        }
+        catch {
+            // File not accessible, skip
+        }
+    }
+    return { newestPath, newestTime };
+}
+/**
+ * Check if a single rule is stale.
+ * Reads timestamp from ruleState instead of frontmatter.
+ */
+export async function checkRuleStaleness(rule, projectRoot, ruleState) {
+    // Get rule timestamp from state (or null if not provided / not found)
+    let ruleTimestamp = null;
+    if (ruleState) {
+        const ts = getRuleTimestamp(ruleState, rule.filePath);
+        if (ts) {
+            const parsed = new Date(ts);
+            if (!isNaN(parsed.getTime())) {
+                ruleTimestamp = parsed;
+            }
+        }
+    }
+    // If no paths defined, rule is not stale (nothing to compare against)
+    if (!rule.frontmatter.paths || rule.frontmatter.paths.length === 0) {
+        return {
+            rule,
+            isStale: false,
+            ruleTimestamp,
+            newestFileModified: null,
+            newestFilePath: null,
+        };
+    }
+    // Find all files matching the rule's patterns
+    const matchingFiles = await findMatchingFiles(rule.frontmatter.paths, projectRoot);
+    // If no files match, rule is not stale
+    if (matchingFiles.length === 0) {
+        return {
+            rule,
+            isStale: false,
+            ruleTimestamp,
+            newestFileModified: null,
+            newestFilePath: null,
+        };
+    }
+    // Get the newest file modification time
+    const { newestPath, newestTime } = await getNewestFileTime(matchingFiles, projectRoot);
+    // Determine if stale: rule is stale if newest file is newer than rule timestamp
+    // If rule has no timestamp, it's considered stale
+    let isStale = false;
+    if (!ruleTimestamp) {
+        isStale = true;
+    }
+    else if (newestTime && newestTime > ruleTimestamp) {
+        isStale = true;
+    }
+    return {
+        rule,
+        isStale,
+        ruleTimestamp,
+        newestFileModified: newestTime,
+        newestFilePath: newestPath,
+    };
+}
+/**
+ * Check all rules for staleness
+ */
+export async function getAllStaleRules(rules, projectRoot, ruleState) {
+    const results = [];
+    for (const rule of rules) {
+        const result = await checkRuleStaleness(rule, projectRoot, ruleState);
+        results.push(result);
+    }
+    return results;
+}
+//# sourceMappingURL=staleness.js.map

package/codeyam-cli/src/utils/rules/staleness.js.map

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package/codeyam-cli/src/utils/serverState.js.map

@@ -1 +1 @@
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+{"version":3,"file":"serverState.js","sourceRoot":"","sources":["../../../../src/utils/serverState.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,IAAI,CAAC;AACzB,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAC7B,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AACzC,OAAO,EAAE,cAAc,EAAE,MAAM,UAAU,CAAC;AAW1C,SAAS,gBAAgB;IACvB,MAAM,WAAW,GAAG,cAAc,EAAE,CAAC;IACrC,IAAI,CAAC,WAAW;QAAE,OAAO,IAAI,CAAC;IAE9B,OAAO,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,UAAU,EAAE,aAAa,CAAC,CAAC;AAC3D,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,KAAkB;IAChD,MAAM,SAAS,GAAG,gBAAgB,EAAE,CAAC;IACrC,IAAI,CAAC,SAAS;QAAE,OAAO;IAEvB,EAAE,CAAC,aAAa,CAAC,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;AAC9D,CAAC;AAED,MAAM,UAAU,eAAe;IAC7B,MAAM,SAAS,GAAG,gBAAgB,EAAE,CAAC;IACrC,IAAI,CAAC,SAAS,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,SAAS,CAAC;QAAE,OAAO,IAAI,CAAC;IAEzD,IAAI,CAAC;QACH,MAAM,OAAO,GAAG,EAAE,CAAC,YAAY,CAAC,SAAS,EAAE,MAAM,CAAC,CAAC;QACnD,OAAO,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;IAC7B,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,IAAI,CAAC;IACd,CAAC;AACH,CAAC;AAED,MAAM,UAAU,gBAAgB;IAC9B,MAAM,SAAS,GAAG,gBAAgB,EAAE,CAAC;IACrC,IAAI,CAAC,SAAS;QAAE,OAAO;IAEvB,IAAI,CAAC;QACH,EAAE,CAAC,UAAU,CAAC,SAAS,CAAC,CAAC;IAC3B,CAAC;IAAC,MAAM,CAAC;QACP,sDAAsD;IACxD,CAAC;AACH,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,GAAW;IAC1C,IAAI,CAAC;QACH,+DAA+D;QAC/D,OAAO,CAAC,IAAI,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC;QACrB,OAAO,IAAI,CAAC;IACd,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,KAAK,CAAC;IACf,CAAC;AACH,CAAC;AAED;;;GAGG;AACH,MAAM,UAAU,oBAAoB;IAClC,IAAI,CAAC;QACH,gEAAgE;QAChE,MAAM,MAAM,GAAG,QAAQ,CAAC,6CAA6C,EAAE;YACrE,QAAQ,EAAE,MAAM;SACjB,CAAC,CAAC,IAAI,EAAE,CAAC;QAEV,IAAI,CAAC,MAAM;YAAE,OAAO,EAAE,CAAC;QAEvB,kCAAkC;QAClC,MAAM,IAAI,GAAa,EAAE,CAAC;QAC1B,KAAK,MAAM,IAAI,IAAI,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC;YACtC,wEAAwE;YACxE,MAAM,KAAK,GAAG,IAAI,CAAC,IAAI,EAAE,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;YACvC,IAAI,KAAK,CAAC,MAAM,IAAI,CAAC,EAAE,CAAC;gBACtB,MAAM,GAAG,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;gBACnC,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC;oBAChB,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;gBACjB,CAAC;YACH,CAAC;QACH,CAAC;QAED,OAAO,IAAI,CAAC;IACd,CAAC;IAAC,MAAM,CAAC;QACP,uCAAuC;QACvC,OAAO,EAAE,CAAC;IACZ,CAAC;AACH,CAAC;AAED,MAAM,UAAU,eAAe;IAK7B,yBAAyB;IACzB,MAAM,KAAK,GAAG,eAAe,EAAE,CAAC;IAChC,IAAI,KAAK,EAAE,CAAC;QACV,MAAM,OAAO,GAAG,gBAAgB,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;QAC5C,IAAI,CAAC,OAAO,EAAE,CAAC;YACb,4BAA4B;YAC5B,gBAAgB,EAAE,CAAC;QACrB,CAAC;aAAM,CAAC;YACN,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,CAAC;QAClC,CAAC;IACH,CAAC;IAED,+DAA+D;IAC/D,MAAM,IAAI,GAAG,oBAAoB,EAAE,CAAC;IACpC,IAAI,IAAI,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACpB,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,IAAI,EAAE,CAAC;IACjC,CAAC;IAED,OAAO,EAAE,OAAO,EAAE,KAAK,EAAE,CAAC;AAC5B,CAAC;AAED,MAAM,UAAU,UAAU;IACxB,IAAI,SAAS,GAAG,KAAK,CAAC;IAEtB,oCAAoC;IACpC,MAAM,KAAK,GAAG,eAAe,EAAE,CAAC;IAChC,IAAI,KAAK,EAAE,CAAC;QACV,IAAI,CAAC;YACH,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;YACnC,gBAAgB,EAAE,CAAC;YACnB,SAAS,GAAG,IAAI,CAAC;QACnB,CAAC;QAAC,MAAM,CAAC;YACP,gCAAgC;YAChC,gBAAgB,EAAE,CAAC;QACrB,CAAC;IACH,CAAC;IAED,2CAA2C;IAC3C,MAAM,IAAI,GAAG,oBAAoB,EAAE,CAAC;IACpC,KAAK,MAAM,GAAG,IAAI,IAAI,EAAE,CAAC;QACvB,IAAI,CAAC;YACH,OAAO,CAAC,IAAI,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;YAC7B,SAAS,GAAG,IAAI,CAAC;QACnB,CAAC;QAAC,MAAM,CAAC;YACP,gDAAgD;QAClD,CAAC;IACH,CAAC;IAED,OAAO,SAAS,CAAC;AACnB,CAAC"}

package/codeyam-cli/src/utils/setupClaudeCodeSettings.js

@@ -38,11 +38,13 @@ export function setupClaudeCodeSettings(projectRoot) {
         // Add CodeYam skills and CLI commands to allow list
         const codeyamPermissions = [
             // Skills
-            'Skill(codeyam-setup)',
-            'Skill(codeyam-sim)',
-            'Skill(codeyam-debug)',
-            'Skill(codeyam-test)',
-            'Skill(codeyam-verify)',
+            'Skill(codeyam:setup)',
+            'Skill(codeyam:sim)',
+            'Skill(codeyam:debug)',
+            'Skill(codeyam:test)',
+            'Skill(codeyam:verify)',
+            'Skill(codeyam:memory)',
+            'Skill(codeyam:new-rule)',
             // CodeYam CLI commands
             'Bash(codeyam)',
             'Bash(codeyam:*)',

package/codeyam-cli/src/utils/setupClaudeCodeSettings.js.map

@@ -1 +1 @@
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+{"version":3,"file":"setupClaudeCodeSettings.js","sourceRoot":"","sources":["../../../../src/utils/setupClaudeCodeSettings.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,IAAI,CAAC;AACzB,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAE7B;;;;;;;;GAQG;AACH,MAAM,UAAU,uBAAuB,CAAC,WAAmB;IACzD,IAAI,CAAC;QACH,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAC;QACpD,MAAM,YAAY,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,qBAAqB,CAAC,CAAC;QAEjE,+CAA+C;QAC/C,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,SAAS,CAAC,EAAE,CAAC;YAC9B,EAAE,CAAC,SAAS,CAAC,SAAS,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;QAC/C,CAAC;QAED,8CAA8C;QAC9C,IAAI,QAAQ,GAAwB,EAAE,CAAC;QACvC,IAAI,EAAE,CAAC,UAAU,CAAC,YAAY,CAAC,EAAE,CAAC;YAChC,IAAI,CAAC;gBACH,MAAM,OAAO,GAAG,EAAE,CAAC,YAAY,CAAC,YAAY,EAAE,MAAM,CAAC,CAAC;gBACtD,QAAQ,GAAG,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;YACjC,CAAC;YAAC,OAAO,KAAK,EAAE,CAAC;gBACf,OAAO,CAAC,IAAI,CACV,4BAA4B,YAAY,wBAAwB,CACjE,CAAC;YACJ,CAAC;QACH,CAAC;QAED,oEAAoE;QACpE,IAAI,CAAC,QAAQ,CAAC,WAAW,EAAE,CAAC;YAC1B,QAAQ,CAAC,WAAW,GAAG,EAAE,CAAC;QAC5B,CAAC;QACD,IAAI,CAAC,QAAQ,CAAC,WAAW,CAAC,KAAK,EAAE,CAAC;YAChC,QAAQ,CAAC,WAAW,CAAC,KAAK,GAAG,EAAE,CAAC;QAClC,CAAC;QAED,oDAAoD;QACpD,MAAM,kBAAkB,GAAG;YACzB,SAAS;YACT,sBAAsB;YACtB,oBAAoB;YACpB,sBAAsB;YACtB,qBAAqB;YACrB,uBAAuB;YACvB,uBAAuB;YACvB,yBAAyB;YAEzB,uBAAuB;YACvB,eAAe;YACf,iBAAiB;YAEjB,yCAAyC;YACzC,mBAAmB;YACnB,mBAAmB;YACnB,oBAAoB;YACpB,mBAAmB;YACnB,uBAAuB;YACvB,uBAAuB;YACvB,wBAAwB;YACxB,uBAAuB;SACxB,CAAC;QAEF,IAAI,OAAO,GAAG,KAAK,CAAC;QACpB,KAAK,MAAM,UAAU,IAAI,kBAAkB,EAAE,CAAC;YAC5C,IAAI,CAAC,QAAQ,CAAC,WAAW,CAAC,KAAK,CAAC,QAAQ,CAAC,UAAU,CAAC,EAAE,CAAC;gBACrD,QAAQ,CAAC,WAAW,CAAC,KAAK,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;gBAC5C,OAAO,GAAG,IAAI,CAAC;YACjB,CAAC;QACH,CAAC;QAED,oDAAoD;QACpD,yBAAyB;QACzB,yBAAyB;QACzB,IAAI;QACJ,8BAA8B;QAC9B,8BAA8B;QAC9B,IAAI;QAEJ,yEAAyE;QACzE,oCAAoC;QACpC,iBAAiB;QACjB,gBAAgB;QAChB,WAAW;QACX,4BAA4B;QAC5B,KAAK;QACL,6DAA6D;QAC7D,+EAA+E;QAC/E,KAAK;QAEL,qBAAqB;QACrB,+BAA+B;QAC/B,eAAe;QACf,UAAU;QACV,2BAA2B;QAC3B,+CAA+C;QAC/C,WAAW;QACX,SAAS;QACT,QAAQ;QACR,oBAAoB;QACpB,IAAI;QAEJ,gEAAgE;QAChE,IAAI,OAAO,EAAE,CAAC;YACZ,EAAE,CAAC,aAAa,CAAC,YAAY,EAAE,IAAI,CAAC,SAAS,CAAC,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC;YAC1E,OAAO,IAAI,CAAC;QACd,CAAC;QAED,qBAAqB;QACrB,OAAO,IAAI,CAAC;IACd,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,OAAO,CAAC,IAAI,CACV,sDAAuD,KAAe,CAAC,OAAO,EAAE,CACjF,CAAC;QACF,OAAO,KAAK,CAAC;IACf,CAAC;AACH,CAAC"}

package/codeyam-cli/src/utils/versionInfo.js

@@ -25,13 +25,6 @@ function findCliPackageRoot() {
     }
     return null;
 }
-/**
- * Find the CLI package.json to get the version
- */
-function findCliPackageJson() {
-    const root = findCliPackageRoot();
-    return root ? path.join(root, 'package.json') : null;
-}
 /**
  * Read build info from a .build-info.json file
  */
@@ -47,22 +40,35 @@ function readBuildInfo(buildInfoPath) {
     }
 }
 /**
- * Get comprehensive version information for display
+ * Get the CLI version from webserver build-info.json (computed once at module load)
+ *
+ * Uses the webserver's semanticVersion (e.g., "0.1.486") which updates on every build,
+ * unlike package.json version which is static.
  */
-export function getVersionInfo(projectSlug) {
-    // Get CLI version from package.json
-    let cliVersion = 'unknown';
+function computeCliVersion() {
     const cliRoot = findCliPackageRoot();
-    const packageJsonPath = findCliPackageJson();
-    if (packageJsonPath) {
-        try {
-            const packageJson = JSON.parse(fs.readFileSync(packageJsonPath, 'utf8'));
-            cliVersion = packageJson.version || 'unknown';
-        }
-        catch {
-            // Use default
+    if (cliRoot) {
+        // Try multiple possible locations (dev vs installed package structure)
+        const possiblePaths = [
+            path.join(cliRoot, 'src/webserver/build-info.json'),
+            path.join(cliRoot, 'codeyam-cli/src/webserver/build-info.json'),
+        ];
+        for (const buildInfoPath of possiblePaths) {
+            const buildInfo = readBuildInfo(buildInfoPath);
+            if (buildInfo?.semanticVersion) {
+                return buildInfo.semanticVersion;
+            }
         }
     }
+    return 'unknown';
+}
+/** The CLI version string, e.g. "0.1.486" */
+export const cliVersion = computeCliVersion();
+/**
+ * Get comprehensive version information for display
+ */
+export function getVersionInfo(projectSlug) {
+    const cliRoot = findCliPackageRoot();
     // Get webserver build info
     // Try multiple possible locations (dev vs installed package structure)
     let webserverVersion = null;

package/codeyam-cli/src/utils/versionInfo.js.map

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package/codeyam-cli/src/utils/wipe.js

@@ -0,0 +1,128 @@
+import { getDatabase, updateProjectMetadata } from "../../../packages/database/index.js";
+/**
+ * Get counts of what would be deleted by a wipe operation.
+ * Used to show confirmation prompt before wipe.
+ */
+export async function getWipeStats(projectId) {
+    const db = getDatabase();
+    const [analyses, scenarios, entities, commits, files] = await Promise.all([
+        db
+            .selectFrom('analyses')
+            .select(db.fn.countAll().as('count'))
+            .where('project_id', '=', projectId)
+            .executeTakeFirst(),
+        db
+            .selectFrom('scenarios')
+            .select(db.fn.countAll().as('count'))
+            .where('project_id', '=', projectId)
+            .executeTakeFirst(),
+        db
+            .selectFrom('entities')
+            .select(db.fn.countAll().as('count'))
+            .where('project_id', '=', projectId)
+            .executeTakeFirst(),
+        db
+            .selectFrom('commits')
+            .select(db.fn.countAll().as('count'))
+            .where('project_id', '=', projectId)
+            .executeTakeFirst(),
+        db
+            .selectFrom('files')
+            .select(db.fn.countAll().as('count'))
+            .where('project_id', '=', projectId)
+            .executeTakeFirst(),
+    ]);
+    return {
+        analyses: Number(analyses?.count ?? 0),
+        scenarios: Number(scenarios?.count ?? 0),
+        entities: Number(entities?.count ?? 0),
+        commits: Number(commits?.count ?? 0),
+        files: Number(files?.count ?? 0),
+    };
+}
+/**
+ * Check if a project has any existing analyses.
+ * Used by baseline command to determine if wipe is needed.
+ */
+export async function hasExistingAnalyses(projectId) {
+    const db = getDatabase();
+    const result = await db
+        .selectFrom('analyses')
+        .select(db.fn.countAll().as('count'))
+        .where('project_id', '=', projectId)
+        .executeTakeFirst();
+    return Number(result?.count ?? 0) > 0;
+}
+/**
+ * Wipe all analysis data for a project.
+ *
+ * Deletes in order to respect foreign key constraints:
+ * 1. Analyses (scenarios cascade via FK)
+ * 2. Entities
+ * 3. Commits (but keeps _local branch structure)
+ * 4. Files
+ *
+ * Also resets project metadata (baselineCompleted, baselineStatus, baselineSha).
+ */
+export async function wipeProject(projectId) {
+    const db = getDatabase();
+    // Get counts before deletion for return value
+    const stats = await getWipeStats(projectId);
+    console.log('[wipe] Starting wipe for project', projectId);
+    // Delete in order respecting FK cascades
+    // 1. Analyses (scenarios will cascade automatically via FK)
+    console.log('[wipe] Deleting analyses...');
+    await db.deleteFrom('analyses').where('project_id', '=', projectId).execute();
+    // 2. Entities
+    console.log('[wipe] Deleting entities...');
+    await db.deleteFrom('entities').where('project_id', '=', projectId).execute();
+    // 3. Commits (keep _local branch structure, just delete commits)
+    console.log('[wipe] Deleting commits...');
+    await db.deleteFrom('commits').where('project_id', '=', projectId).execute();
+    // 4. Files
+    console.log('[wipe] Deleting files...');
+    await db.deleteFrom('files').where('project_id', '=', projectId).execute();
+    // Reset project metadata
+    console.log('[wipe] Resetting project metadata...');
+    await updateProjectMetadata({
+        projectId,
+        updateCallback: (metadata) => {
+            delete metadata.baselineCompleted;
+            delete metadata.baselineSha;
+        },
+    });
+    console.log('[wipe] Wipe completed');
+    return stats;
+}
+/**
+ * Format wipe stats for display.
+ */
+export function formatWipeStats(stats) {
+    const lines = [];
+    if (stats.entities > 0) {
+        lines.push(`  • ${stats.entities.toLocaleString()} entities`);
+    }
+    if (stats.analyses > 0) {
+        lines.push(`  • ${stats.analyses.toLocaleString()} analyses`);
+    }
+    if (stats.scenarios > 0) {
+        lines.push(`  • ${stats.scenarios.toLocaleString()} scenarios`);
+    }
+    if (stats.commits > 0) {
+        lines.push(`  • ${stats.commits.toLocaleString()} commits`);
+    }
+    if (stats.files > 0) {
+        lines.push(`  • ${stats.files.toLocaleString()} files`);
+    }
+    return lines.join('\n');
+}
+/**
+ * Check if wipe stats indicate there's something to delete.
+ */
+export function hasDataToWipe(stats) {
+    return (stats.analyses > 0 ||
+        stats.entities > 0 ||
+        stats.commits > 0 ||
+        stats.files > 0);
+}
+//# sourceMappingURL=wipe.js.map

package/codeyam-cli/src/utils/wipe.js.map

@@ -0,0 +1 @@
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package/codeyam-cli/src/webserver/app/lib/database.js

@@ -1,5 +1,6 @@
 import { loadCommits, loadEntities, loadAnalyses, loadEntity, updateProjectMetadata, } from "../../../../../packages/database/index.js";
 import { initializeEnvironment, requireBranchAndProject, } from "../../../utils/database.js";
+export { requireBranchAndProject };
 import { getProjectRoot } from "../../../state.js";
 import path from 'path';
 import fs from 'fs/promises';
@@ -14,9 +15,9 @@ export async function getProjectRuns(projectId, branchId, limit = 50) {
 }
 export async function getAllEntities() {
     await initializeEnvironment();
-    const allEntities = await loadEntities({});
+    const allEntities = await loadEntities({ excludeMetadata: true });
     if (!allEntities || allEntities.length === 0) {
-        return allEntities;
+        return [];
     }
     // Filter out superseded entities - only return current versions
     const entities = allEntities.filter((e) => !e.metadata?.isSuperseded);
@@ -29,6 +30,7 @@ export async function getAllEntities() {
     const allShas = [...new Set([...entityShas, ...previousVersionShas])];
     const analyses = await loadAnalyses({
         entityShas: allShas,
+        excludeMetadata: true,
     });
     // Create a map of entity SHA to analyses
     const analysisMap = new Map();
@@ -42,7 +44,7 @@ export async function getAllEntities() {
     }
     // Attach analyses to entities
     // If entity has no analyses but has previousVersionWithAnalyses, inherit from that version
-    return entities.map((entity) => {
+    const result = entities.map((entity) => {
         const directAnalyses = analysisMap.get(entity.sha) || [];
         if (directAnalyses.length > 0) {
             return {
@@ -64,6 +66,7 @@ export async function getAllEntities() {
             analyses: [],
         };
     });
+    return result;
 }
 /**
  * Load current (non-superseded) entities matching the given criteria.
@@ -108,6 +111,75 @@ export async function getAnalysesForEntity(entitySha, includeEntity) {
     }
     return analyses || [];
 }
+/**
+ * Get the latest analysis for an entity, looking across all versions of that entity.
+ * This handles the case where an entity has changed since its last analysis -
+ * we still want to show the most recent analysis results (which may be from a different version).
+ *
+ * Queries by entity name to find all analyses across versions, then returns the most recent.
+ */
+export async function getLatestAnalysisForEntity(entity) {
+    await initializeEnvironment();
+    // Query by entity name to get ALL analyses across all versions of this entity
+    // This ensures we always show the most recent analysis, even if it's from a different version
+    if (entity.name && entity.projectId) {
+        const byName = await loadAnalyses({
+            projectId: entity.projectId,
+            entityName: entity.name,
+            limit: 10, // Get recent analyses
+        });
+        if (byName && byName.length > 0) {
+            // Filter to analyses that have scenarios (completed analyses)
+            // and optionally match the file path for disambiguation
+            const completedAnalyses = byName.filter((a) => {
+                const hasScenarios = a.scenarios && a.scenarios.length > 0;
+                // If file paths match, prefer those (handles renamed entities)
+                const filePathMatches = !entity.filePath || a.filePath === entity.filePath;
+                return hasScenarios && filePathMatches;
+            });
+            if (completedAnalyses.length > 0) {
+                // Sort by createdAt descending and return the most recent
+                completedAnalyses.sort((a, b) => {
+                    const dateA = new Date(a.createdAt || 0).getTime();
+                    const dateB = new Date(b.createdAt || 0).getTime();
+                    return dateB - dateA;
+                });
+                return completedAnalyses[0];
+            }
+            // If no completed analyses with matching file path, return most recent with scenarios
+            const withScenarios = byName.filter((a) => a.scenarios && a.scenarios.length > 0);
+            if (withScenarios.length > 0) {
+                withScenarios.sort((a, b) => {
+                    const dateA = new Date(a.createdAt || 0).getTime();
+                    const dateB = new Date(b.createdAt || 0).getTime();
+                    return dateB - dateA;
+                });
+                return withScenarios[0];
+            }
+        }
+    }
+    // Fall back to exact sha match (for entities without name/projectId)
+    const exactMatch = await loadAnalyses({
+        entityShas: [entity.sha],
+        limit: 1,
+    });
+    if (exactMatch && exactMatch.length > 0) {
+        return exactMatch[0];
+    }
+    return null;
+}
+/**
+ * Get the analysis for the exact entity SHA, even if it errored and has no scenarios.
+ * This is used to detect if an analysis was attempted but failed.
+ */
+export async function getAnalysisForExactEntitySha(entitySha) {
+    await initializeEnvironment();
+    const analyses = await loadAnalyses({
+        entityShas: [entitySha],
+        limit: 1,
+    });
+    return analyses?.[0] ?? null;
+}
 export async function getEntityBySha(entitySha) {
     await initializeEnvironment();
     const projectSlug = await getProjectSlug();
@@ -280,10 +352,12 @@ export async function getCurrentCommit() {
         }
         const { project, branch } = await requireBranchAndProject(projectSlug);
         // Load the latest commit for this branch
+        // skipRelations: true avoids loading analyses/entities which we don't need for commit metadata
         const commits = await loadCommits({
             projectId: project.id,
             branchId: branch.id,
             limit: 1,
+            skipRelations: true,
         });
         if (commits && commits.length > 0) {
             return commits[0];
@@ -329,6 +403,33 @@ export async function getEntityCodeFromFilesystem(entity) {
         return null;
     }
 }
+/**
+ * Check if the file on disk has been modified since the entity was created/updated.
+ * This helps detect changes that the file watcher may not have processed yet.
+ */
+export async function hasFileBeenModifiedSinceEntity(entity) {
+    try {
+        const projectRoot = getProjectRoot();
+        if (!projectRoot || !entity.filePath) {
+            return false;
+        }
+        const fullPath = path.join(projectRoot, entity.filePath);
+        const stats = await fs.stat(fullPath);
+        const fileModTime = stats.mtime.getTime();
+        // Use entity's updatedAt or createdAt timestamp
+        const entityTime = entity.updatedAt || entity.createdAt;
+        if (!entityTime) {
+            return false;
+        }
+        const entityTimestamp = new Date(entityTime).getTime();
+        // Add a small buffer (1 second) to account for timing differences
+        return fileModTime > entityTimestamp + 1000;
+    }
+    catch (error) {
+        // If we can't check, assume no change
+        return false;
+    }
+}
 export async function getEntityHistory(entity) {
     await initializeEnvironment();
     if (!entity.filePath || !entity.name || !entity.projectId) {