@codeqr/ts-mcp 0.9.0 → 0.24.0

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@codeqr/ts-mcp",
-  "version": "0.9.0",
+  "version": "0.24.0",
   "description": "The official MCP Server for the CodeQR API",
   "author": "CodeQR <contact@codeqr.io>",
   "types": "./index.d.ts",
@@ -23,19 +23,27 @@
     "build": "bash ./build",
     "format": "prettier --write --cache --cache-strategy metadata . !dist",
     "tsn": "ts-node -r tsconfig-paths/register",
-    "lint": "eslint --ext ts,js .",
-    "fix": "eslint --fix --ext ts,js ."
+    "lint": "eslint .",
+    "fix": "eslint --fix ."
   },
   "dependencies": {
-    "@codeqr/ts": "^0.9.0",
+    "@codeqr/ts": "^0.24.0",
+    "ajv": "^8.18.0",
     "@cloudflare/cabidela": "^0.2.4",
-    "@modelcontextprotocol/sdk": "^1.24.0",
+    "@hono/node-server": "^1.19.10",
+    "@modelcontextprotocol/sdk": "^1.27.1",
+    "hono": "^4.12.4",
     "@valtown/deno-http-worker": "^0.0.21",
+    "cookie-parser": "^1.4.6",
     "cors": "^2.8.5",
     "express": "^5.1.0",
     "fuse.js": "^7.1.0",
+    "minisearch": "^7.2.0",
     "jq-web": "https://github.com/stainless-api/jq-web/releases/download/v0.8.8/jq-web.tar.gz",
-    "qs": "^6.14.0",
+    "pino": "^10.3.1",
+    "pino-http": "^11.0.0",
+    "pino-pretty": "^13.1.3",
+    "qs": "^6.14.1",
     "typescript": "5.8.3",
     "yargs": "^17.7.2",
     "zod": "^3.25.20",
@@ -58,6 +66,22 @@
       "types": "./index.d.mts",
       "default": "./index.mjs"
     },
+    "./auth": {
+      "import": "./auth.mjs",
+      "require": "./auth.js"
+    },
+    "./auth.js": {
+      "default": "./auth.js"
+    },
+    "./auth.mjs": {
+      "default": "./auth.mjs"
+    },
+    "./code-tool-paths": {
+      "require": "./code-tool-paths.cjs"
+    },
+    "./code-tool-paths.cjs": {
+      "default": "./code-tool-paths.cjs"
+    },
     "./code-tool-types": {
       "import": "./code-tool-types.mjs",
       "require": "./code-tool-types.js"
@@ -68,6 +92,16 @@
     "./code-tool-types.mjs": {
       "default": "./code-tool-types.mjs"
     },
+    "./code-tool-worker": {
+      "import": "./code-tool-worker.mjs",
+      "require": "./code-tool-worker.js"
+    },
+    "./code-tool-worker.js": {
+      "default": "./code-tool-worker.js"
+    },
+    "./code-tool-worker.mjs": {
+      "default": "./code-tool-worker.mjs"
+    },
     "./code-tool": {
       "import": "./code-tool.mjs",
       "require": "./code-tool.js"
@@ -78,16 +112,6 @@
     "./code-tool.mjs": {
       "default": "./code-tool.mjs"
     },
-    "./compat": {
-      "import": "./compat.mjs",
-      "require": "./compat.js"
-    },
-    "./compat.js": {
-      "default": "./compat.js"
-    },
-    "./compat.mjs": {
-      "default": "./compat.mjs"
-    },
     "./docs-search-tool": {
       "import": "./docs-search-tool.mjs",
       "require": "./docs-search-tool.js"
@@ -98,36 +122,6 @@
     "./docs-search-tool.mjs": {
       "default": "./docs-search-tool.mjs"
     },
-    "./dynamic-tools": {
-      "import": "./dynamic-tools.mjs",
-      "require": "./dynamic-tools.js"
-    },
-    "./dynamic-tools.js": {
-      "default": "./dynamic-tools.js"
-    },
-    "./dynamic-tools.mjs": {
-      "default": "./dynamic-tools.mjs"
-    },
-    "./filtering": {
-      "import": "./filtering.mjs",
-      "require": "./filtering.js"
-    },
-    "./filtering.js": {
-      "default": "./filtering.js"
-    },
-    "./filtering.mjs": {
-      "default": "./filtering.mjs"
-    },
-    "./headers": {
-      "import": "./headers.mjs",
-      "require": "./headers.js"
-    },
-    "./headers.js": {
-      "default": "./headers.js"
-    },
-    "./headers.mjs": {
-      "default": "./headers.mjs"
-    },
     "./http": {
       "import": "./http.mjs",
       "require": "./http.js"
@@ -148,6 +142,46 @@
     "./index.mjs": {
       "default": "./index.mjs"
     },
+    "./instructions": {
+      "import": "./instructions.mjs",
+      "require": "./instructions.js"
+    },
+    "./instructions.js": {
+      "default": "./instructions.js"
+    },
+    "./instructions.mjs": {
+      "default": "./instructions.mjs"
+    },
+    "./local-docs-search": {
+      "import": "./local-docs-search.mjs",
+      "require": "./local-docs-search.js"
+    },
+    "./local-docs-search.js": {
+      "default": "./local-docs-search.js"
+    },
+    "./local-docs-search.mjs": {
+      "default": "./local-docs-search.mjs"
+    },
+    "./logger": {
+      "import": "./logger.mjs",
+      "require": "./logger.js"
+    },
+    "./logger.js": {
+      "default": "./logger.js"
+    },
+    "./logger.mjs": {
+      "default": "./logger.mjs"
+    },
+    "./methods": {
+      "import": "./methods.mjs",
+      "require": "./methods.js"
+    },
+    "./methods.js": {
+      "default": "./methods.js"
+    },
+    "./methods.mjs": {
+      "default": "./methods.mjs"
+    },
     "./options": {
       "import": "./options.mjs",
       "require": "./options.js"
@@ -178,25 +212,25 @@
     "./stdio.mjs": {
       "default": "./stdio.mjs"
     },
-    "./tools/*.mjs": {
-      "default": "./tools/*.mjs"
+    "./types": {
+      "import": "./types.mjs",
+      "require": "./types.js"
     },
-    "./tools/*.js": {
-      "default": "./tools/*.js"
+    "./types.js": {
+      "default": "./types.js"
     },
-    "./tools/*": {
-      "import": "./tools/*.mjs",
-      "require": "./tools/*.js"
+    "./types.mjs": {
+      "default": "./types.mjs"
     },
-    "./tools": {
-      "import": "./tools.mjs",
-      "require": "./tools.js"
+    "./util": {
+      "import": "./util.mjs",
+      "require": "./util.js"
     },
-    "./tools.js": {
-      "default": "./tools.js"
+    "./util.js": {
+      "default": "./util.js"
     },
-    "./tools.mjs": {
-      "default": "./tools.mjs"
+    "./util.mjs": {
+      "default": "./util.mjs"
     }
   }
 }

package/server.d.mts

@@ -1,18 +1,12 @@
 import { Server } from '@modelcontextprotocol/sdk/server/index.js';
 import { McpServer } from '@modelcontextprotocol/sdk/server/mcp.js';
-import { Endpoint, HandlerFunction } from "./tools.mjs";
-import { Tool } from '@modelcontextprotocol/sdk/types.js';
 import { ClientOptions } from '@codeqr/ts';
-import Codeqr from '@codeqr/ts';
-import { ClientCapabilities } from "./compat.mjs";
 import { McpOptions } from "./options.mjs";
-export { McpOptions } from "./options.mjs";
-export { ClientType } from "./compat.mjs";
-export { Filter } from "./tools.mjs";
-export { ClientOptions } from '@codeqr/ts';
-export { endpoints } from "./tools.mjs";
-export declare const newMcpServer: () => McpServer;
-export declare const server: McpServer;
+import { HandlerFunction, McpRequestContext, ToolCallResult, McpTool } from "./types.mjs";
+export declare const newMcpServer: ({ stainlessApiKey, customInstructionsPath, }: {
+    stainlessApiKey?: string | undefined;
+    customInstructionsPath?: string | undefined;
+}) => Promise<McpServer>;
 /**
  * Initializes the provided MCP Server with the given tools and handlers.
  * If not provided, the default client, tools and handlers will be used.
@@ -21,15 +15,24 @@ export declare function initMcpServer(params: {
     server: Server | McpServer;
     clientOptions?: ClientOptions;
     mcpOptions?: McpOptions;
-}): void;
+    stainlessApiKey?: string | undefined;
+    upstreamClientEnvs?: Record<string, string> | undefined;
+    mcpSessionId?: string | undefined;
+    mcpClientInfo?: {
+        name: string;
+        version: string;
+    } | undefined;
+}): Promise<void>;
 /**
  * Selects the tools to include in the MCP Server based on the provided options.
  */
-export declare function selectTools(endpoints: Endpoint[], options?: McpOptions): Promise<Endpoint[]>;
+export declare function selectTools(options?: McpOptions): McpTool[];
 /**
  * Runs the provided handler with the given client and arguments.
  */
-export declare function executeHandler(tool: Tool, handler: HandlerFunction, client: Codeqr, args: Record<string, unknown> | undefined, compatibilityOptions?: Partial<ClientCapabilities>): Promise<import("./tools/types").ToolCallResult>;
-export declare const readEnv: (env: string) => string | undefined;
-export declare const readEnvOrError: (env: string) => string;
+export declare function executeHandler({ handler, reqContext, args, }: {
+    handler: HandlerFunction;
+    reqContext: McpRequestContext;
+    args: Record<string, unknown> | undefined;
+}): Promise<ToolCallResult>;
 //# sourceMappingURL=server.d.mts.map

package/server.d.mts.map

@@ -1 +1 @@
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+{"version":3,"file":"server.d.mts","sourceRoot":"","sources":["src/server.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,MAAM,EAAE,MAAM,2CAA2C,CAAC;AACnE,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAMpE,OAAO,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC;AAO3C,OAAO,EAAE,UAAU,EAAE,sBAAkB;AAEvC,OAAO,EAAE,eAAe,EAAE,iBAAiB,EAAE,cAAc,EAAE,OAAO,EAAE,oBAAgB;AAEtF,eAAO,MAAM,YAAY,GAAU,8CAGhC;IACD,eAAe,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IACrC,sBAAsB,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;CAC7C,uBAUE,CAAC;AAEJ;;;GAGG;AACH,wBAAsB,aAAa,CAAC,MAAM,EAAE;IAC1C,MAAM,EAAE,MAAM,GAAG,SAAS,CAAC;IAC3B,aAAa,CAAC,EAAE,aAAa,CAAC;IAC9B,UAAU,CAAC,EAAE,UAAU,CAAC;IACxB,eAAe,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IACrC,kBAAkB,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,GAAG,SAAS,CAAC;IACxD,YAAY,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IAClC,aAAa,CAAC,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,OAAO,EAAE,MAAM,CAAA;KAAE,GAAG,SAAS,CAAC;CAC/D,iBA0HA;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,OAAO,CAAC,EAAE,UAAU,GAAG,OAAO,EAAE,CAe3D;AAED;;GAEG;AACH,wBAAsB,cAAc,CAAC,EACnC,OAAO,EACP,UAAU,EACV,IAAI,GACL,EAAE;IACD,OAAO,EAAE,eAAe,CAAC;IACzB,UAAU,EAAE,iBAAiB,CAAC;IAC9B,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,SAAS,CAAC;CAC3C,GAAG,OAAO,CAAC,cAAc,CAAC,CAE1B"}

package/server.d.ts

@@ -1,18 +1,12 @@
 import { Server } from '@modelcontextprotocol/sdk/server/index.js';
 import { McpServer } from '@modelcontextprotocol/sdk/server/mcp.js';
-import { Endpoint, HandlerFunction } from "./tools.js";
-import { Tool } from '@modelcontextprotocol/sdk/types.js';
 import { ClientOptions } from '@codeqr/ts';
-import Codeqr from '@codeqr/ts';
-import { ClientCapabilities } from "./compat.js";
 import { McpOptions } from "./options.js";
-export { McpOptions } from "./options.js";
-export { ClientType } from "./compat.js";
-export { Filter } from "./tools.js";
-export { ClientOptions } from '@codeqr/ts';
-export { endpoints } from "./tools.js";
-export declare const newMcpServer: () => McpServer;
-export declare const server: McpServer;
+import { HandlerFunction, McpRequestContext, ToolCallResult, McpTool } from "./types.js";
+export declare const newMcpServer: ({ stainlessApiKey, customInstructionsPath, }: {
+    stainlessApiKey?: string | undefined;
+    customInstructionsPath?: string | undefined;
+}) => Promise<McpServer>;
 /**
  * Initializes the provided MCP Server with the given tools and handlers.
  * If not provided, the default client, tools and handlers will be used.
@@ -21,15 +15,24 @@ export declare function initMcpServer(params: {
     server: Server | McpServer;
     clientOptions?: ClientOptions;
     mcpOptions?: McpOptions;
-}): void;
+    stainlessApiKey?: string | undefined;
+    upstreamClientEnvs?: Record<string, string> | undefined;
+    mcpSessionId?: string | undefined;
+    mcpClientInfo?: {
+        name: string;
+        version: string;
+    } | undefined;
+}): Promise<void>;
 /**
  * Selects the tools to include in the MCP Server based on the provided options.
  */
-export declare function selectTools(endpoints: Endpoint[], options?: McpOptions): Promise<Endpoint[]>;
+export declare function selectTools(options?: McpOptions): McpTool[];
 /**
  * Runs the provided handler with the given client and arguments.
  */
-export declare function executeHandler(tool: Tool, handler: HandlerFunction, client: Codeqr, args: Record<string, unknown> | undefined, compatibilityOptions?: Partial<ClientCapabilities>): Promise<import("./tools/types").ToolCallResult>;
-export declare const readEnv: (env: string) => string | undefined;
-export declare const readEnvOrError: (env: string) => string;
+export declare function executeHandler({ handler, reqContext, args, }: {
+    handler: HandlerFunction;
+    reqContext: McpRequestContext;
+    args: Record<string, unknown> | undefined;
+}): Promise<ToolCallResult>;
 //# sourceMappingURL=server.d.ts.map

package/server.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["src/server.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,MAAM,EAAE,MAAM,2CAA2C,CAAC;AACnE,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAMpE,OAAO,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC;AAO3C,OAAO,EAAE,UAAU,EAAE,qBAAkB;AAEvC,OAAO,EAAE,eAAe,EAAE,iBAAiB,EAAE,cAAc,EAAE,OAAO,EAAE,mBAAgB;AAEtF,eAAO,MAAM,YAAY,GAAU,8CAGhC;IACD,eAAe,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IACrC,sBAAsB,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;CAC7C,uBAUE,CAAC;AAEJ;;;GAGG;AACH,wBAAsB,aAAa,CAAC,MAAM,EAAE;IAC1C,MAAM,EAAE,MAAM,GAAG,SAAS,CAAC;IAC3B,aAAa,CAAC,EAAE,aAAa,CAAC;IAC9B,UAAU,CAAC,EAAE,UAAU,CAAC;IACxB,eAAe,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IACrC,kBAAkB,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,GAAG,SAAS,CAAC;IACxD,YAAY,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;IAClC,aAAa,CAAC,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,OAAO,EAAE,MAAM,CAAA;KAAE,GAAG,SAAS,CAAC;CAC/D,iBA0HA;AAED;;GAEG;AACH,wBAAgB,WAAW,CAAC,OAAO,CAAC,EAAE,UAAU,GAAG,OAAO,EAAE,CAe3D;AAED;;GAEG;AACH,wBAAsB,cAAc,CAAC,EACnC,OAAO,EACP,UAAU,EACV,IAAI,GACL,EAAE;IACD,OAAO,EAAE,eAAe,CAAC;IACzB,UAAU,EAAE,iBAAiB,CAAC;IAC9B,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,SAAS,CAAC;CAC3C,GAAG,OAAO,CAAC,cAAc,CAAC,CAE1B"}

package/server.js

@@ -4,52 +4,33 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.readEnvOrError = exports.readEnv = exports.server = exports.newMcpServer = exports.endpoints = exports.ClientType = void 0;
+exports.newMcpServer = void 0;
 exports.initMcpServer = initMcpServer;
 exports.selectTools = selectTools;
 exports.executeHandler = executeHandler;
 const mcp_js_1 = require("@modelcontextprotocol/sdk/server/mcp.js");
-const tools_1 = require("./tools.js");
 const types_js_1 = require("@modelcontextprotocol/sdk/types.js");
 const ts_1 = __importDefault(require("@codeqr/ts"));
-const compat_1 = require("./compat.js");
-const dynamic_tools_1 = require("./dynamic-tools.js");
 const code_tool_1 = require("./code-tool.js");
 const docs_search_tool_1 = __importDefault(require("./docs-search-tool.js"));
-var compat_2 = require("./compat.js");
-Object.defineProperty(exports, "ClientType", { enumerable: true, get: function () { return compat_2.ClientType; } });
-var tools_2 = require("./tools.js");
-Object.defineProperty(exports, "endpoints", { enumerable: true, get: function () { return tools_2.endpoints; } });
-const newMcpServer = () => new mcp_js_1.McpServer({
+const docs_search_tool_2 = require("./docs-search-tool.js");
+const local_docs_search_1 = require("./local-docs-search.js");
+const instructions_1 = require("./instructions.js");
+const methods_1 = require("./methods.js");
+const newMcpServer = async ({ stainlessApiKey, customInstructionsPath, }) => new mcp_js_1.McpServer({
     name: 'codeqr_ts_api',
-    version: '0.9.0',
-}, { capabilities: { tools: {}, logging: {} } });
+    version: '0.24.0', // x-release-please-version
+}, {
+    instructions: await (0, instructions_1.getInstructions)({ stainlessApiKey, customInstructionsPath }),
+    capabilities: { tools: {}, logging: {} },
+});
 exports.newMcpServer = newMcpServer;
-// Create server instance
-exports.server = (0, exports.newMcpServer)();
 /**
  * Initializes the provided MCP Server with the given tools and handlers.
  * If not provided, the default client, tools and handlers will be used.
  */
-function initMcpServer(params) {
+async function initMcpServer(params) {
     const server = params.server instanceof mcp_js_1.McpServer ? params.server.server : params.server;
-    const mcpOptions = params.mcpOptions ?? {};
-    let providedEndpoints = null;
-    let endpointMap = null;
-    const initTools = async (implementation) => {
-        if (implementation && (!mcpOptions.client || mcpOptions.client === 'infer')) {
-            mcpOptions.client =
-                implementation.name.toLowerCase().includes('claude') ? 'claude'
-                    : implementation.name.toLowerCase().includes('cursor') ? 'cursor'
-                        : undefined;
-            mcpOptions.capabilities = {
-                ...(mcpOptions.client && compat_1.knownClients[mcpOptions.client]),
-                ...mcpOptions.capabilities,
-            };
-        }
-        providedEndpoints ?? (providedEndpoints = await selectTools(tools_1.endpoints, mcpOptions));
-        endpointMap ?? (endpointMap = Object.fromEntries(providedEndpoints.map((endpoint) => [endpoint.tool.name, endpoint])));
-    };
     const logAtLevel = (level) => (message, ...rest) => {
         void server.sendLoggingMessage({
             level,
@@ -62,113 +43,126 @@ function initMcpServer(params) {
         warn: logAtLevel('warning'),
         error: logAtLevel('error'),
     };
-    let client = new ts_1.default({
-        logger,
-        ...params.clientOptions,
-        defaultHeaders: {
-            ...params.clientOptions?.defaultHeaders,
-            'X-Stainless-MCP': 'true',
-        },
-    });
-    server.setRequestHandler(types_js_1.ListToolsRequestSchema, async () => {
-        if (providedEndpoints === null) {
-            await initTools(server.getClientVersion());
+    if (params.mcpOptions?.docsSearchMode === 'local') {
+        const docsDir = params.mcpOptions?.docsDir;
+        const localSearch = await local_docs_search_1.LocalDocsSearch.create(docsDir ? { docsDir } : undefined);
+        (0, docs_search_tool_2.setLocalSearch)(localSearch);
+    }
+    let _client;
+    let _clientError;
+    let _logLevel;
+    const getClient = () => {
+        if (_clientError)
+            throw _clientError;
+        if (!_client) {
+            try {
+                _client = new ts_1.default({
+                    logger,
+                    ...params.clientOptions,
+                    defaultHeaders: {
+                        ...params.clientOptions?.defaultHeaders,
+                        'X-Stainless-MCP': 'true',
+                    },
+                });
+                if (_logLevel) {
+                    _client = _client.withOptions({ logLevel: _logLevel });
+                }
+            }
+            catch (e) {
+                _clientError = e instanceof Error ? e : new Error(String(e));
+                throw _clientError;
+            }
         }
+        return _client;
+    };
+    const providedTools = selectTools(params.mcpOptions);
+    const toolMap = Object.fromEntries(providedTools.map((mcpTool) => [mcpTool.tool.name, mcpTool]));
+    server.setRequestHandler(types_js_1.ListToolsRequestSchema, async () => {
         return {
-            tools: providedEndpoints.map((endpoint) => endpoint.tool),
+            tools: providedTools.map((mcpTool) => mcpTool.tool),
         };
     });
     server.setRequestHandler(types_js_1.CallToolRequestSchema, async (request) => {
-        if (endpointMap === null) {
-            await initTools(server.getClientVersion());
-        }
         const { name, arguments: args } = request.params;
-        const endpoint = endpointMap[name];
-        if (!endpoint) {
+        const mcpTool = toolMap[name];
+        if (!mcpTool) {
             throw new Error(`Unknown tool: ${name}`);
         }
-        return executeHandler(endpoint.tool, endpoint.handler, client, args, mcpOptions.capabilities);
+        let client;
+        try {
+            client = getClient();
+        }
+        catch (error) {
+            return {
+                content: [
+                    {
+                        type: 'text',
+                        text: `Failed to initialize client: ${error instanceof Error ? error.message : String(error)}`,
+                    },
+                ],
+                isError: true,
+            };
+        }
+        return executeHandler({
+            handler: mcpTool.handler,
+            reqContext: {
+                client,
+                stainlessApiKey: params.stainlessApiKey ?? params.mcpOptions?.stainlessApiKey,
+                upstreamClientEnvs: params.upstreamClientEnvs,
+                mcpSessionId: params.mcpSessionId,
+                mcpClientInfo: params.mcpClientInfo,
+            },
+            args,
+        });
     });
     server.setRequestHandler(types_js_1.SetLevelRequestSchema, async (request) => {
         const { level } = request.params;
+        let logLevel;
         switch (level) {
             case 'debug':
-                client = client.withOptions({ logLevel: 'debug' });
+                logLevel = 'debug';
                 break;
             case 'info':
-                client = client.withOptions({ logLevel: 'info' });
+                logLevel = 'info';
                 break;
             case 'notice':
             case 'warning':
-                client = client.withOptions({ logLevel: 'warn' });
+                logLevel = 'warn';
                 break;
             case 'error':
-                client = client.withOptions({ logLevel: 'error' });
+                logLevel = 'error';
                 break;
             default:
-                client = client.withOptions({ logLevel: 'off' });
+                logLevel = 'off';
                 break;
         }
+        _logLevel = logLevel;
+        if (_client) {
+            _client = _client.withOptions({ logLevel });
+        }
         return {};
     });
 }
 /**
  * Selects the tools to include in the MCP Server based on the provided options.
  */
-async function selectTools(endpoints, options) {
-    const filteredEndpoints = (0, tools_1.query)(options?.filters ?? [], endpoints);
-    let includedTools = filteredEndpoints.slice();
-    if (includedTools.length > 0) {
-        if (options?.includeDynamicTools) {
-            includedTools = (0, dynamic_tools_1.dynamicTools)(includedTools);
-        }
-    }
-    else {
-        if (options?.includeAllTools) {
-            includedTools = endpoints.slice();
-        }
-        else if (options?.includeDynamicTools) {
-            includedTools = (0, dynamic_tools_1.dynamicTools)(endpoints);
-        }
-        else if (options?.includeCodeTools) {
-            includedTools = [await (0, code_tool_1.codeTool)()];
-        }
-        else {
-            includedTools = endpoints.slice();
-        }
+function selectTools(options) {
+    const includedTools = [];
+    if (options?.includeCodeTool ?? true) {
+        includedTools.push((0, code_tool_1.codeTool)({
+            blockedMethods: (0, methods_1.blockedMethodsForCodeTool)(options),
+            codeExecutionMode: options?.codeExecutionMode ?? 'local',
+        }));
     }
     if (options?.includeDocsTools ?? true) {
         includedTools.push(docs_search_tool_1.default);
     }
-    const capabilities = { ...compat_1.defaultClientCapabilities, ...options?.capabilities };
-    return (0, compat_1.applyCompatibilityTransformations)(includedTools, capabilities);
+    return includedTools;
 }
 /**
  * Runs the provided handler with the given client and arguments.
  */
-async function executeHandler(tool, handler, client, args, compatibilityOptions) {
-    const options = { ...compat_1.defaultClientCapabilities, ...compatibilityOptions };
-    if (!options.validJson && args) {
-        args = (0, compat_1.parseEmbeddedJSON)(args, tool.inputSchema);
-    }
-    return await handler(client, args || {});
+async function executeHandler({ handler, reqContext, args, }) {
+    return await handler({ reqContext, args: args || {} });
 }
-const readEnv = (env) => {
-    if (typeof globalThis.process !== 'undefined') {
-        return globalThis.process.env?.[env]?.trim();
-    }
-    else if (typeof globalThis.Deno !== 'undefined') {
-        return globalThis.Deno.env?.get?.(env)?.trim();
-    }
-    return;
-};
-exports.readEnv = readEnv;
-const readEnvOrError = (env) => {
-    let envValue = (0, exports.readEnv)(env);
-    if (envValue === undefined) {
-        throw new Error(`Environment variable ${env} is not set`);
-    }
-    return envValue;
-};
-exports.readEnvOrError = readEnvOrError;
 //# sourceMappingURL=server.js.map