@codemcp/workflows-core 3.1.21-fix-build-after-monorepo.0 → 3.1.21-fix-build-after-monorepo.1

package/.turbo/turbo-build.log

@@ -1,4 +1,4 @@
 
-> @codemcp/workflows-core@3.1.21-fix-build-after-monorepo.0 build /home/runner/work/responsible-vibe-mcp/responsible-vibe-mcp/packages/core
+> @codemcp/workflows-core@3.1.21-fix-build-after-monorepo.1 build /home/runner/work/responsible-vibe-mcp/responsible-vibe-mcp/packages/core
 > tsc -p tsconfig.build.json
 

package/dist/database.d.ts

@@ -2,7 +2,7 @@
  * Database Manager
  *
  * Handles SQLite database operations for conversation state persistence.
- * Uses better-sqlite3 for reliable cross-platform native bindings.
+ * Uses @sqlite.org/sqlite-wasm for reliable cross-platform WebAssembly bindings.
  */
 import type { ConversationState, InteractionLog } from './types.js';
 /**
@@ -10,12 +10,21 @@ import type { ConversationState, InteractionLog } from './types.js';
  */
 export declare class Database {
     private db;
+    private sqlite3;
     private dbPath;
     constructor(dbPath: string);
     /**
      * Initialize database connection and create tables
      */
     initialize(): Promise<void>;
+    /**
+     * Load database content from file
+     */
+    private loadFromFile;
+    /**
+     * Save database content to file
+     */
+    private saveToFile;
     /**
      * Create database tables if they don't exist
      */
@@ -25,39 +34,39 @@ export declare class Database {
      */
     saveConversationState(state: ConversationState): Promise<void>;
     /**
-     * Load conversation state from database
-     */
-    loadConversationState(conversationId: string): Promise<ConversationState | null>;
-    /**
-     * Get conversation state by ID (alias for loadConversationState)
+     * Get conversation state by ID
      */
     getConversationState(conversationId: string): Promise<ConversationState | null>;
     /**
-     * List all conversation states
+     * Get all conversation states
      */
-    listConversationStates(): Promise<ConversationState[]>;
+    getAllConversationStates(): Promise<ConversationState[]>;
     /**
      * Delete conversation state
      */
     deleteConversationState(conversationId: string): Promise<boolean>;
     /**
-     * Log an interaction to the database
+     * Log interaction
      */
     logInteraction(log: InteractionLog): Promise<void>;
     /**
-     * Get interactions by conversation ID
+     * Get interaction logs for a conversation
+     */
+    getInteractionLogs(conversationId: string): Promise<InteractionLog[]>;
+    /**
+     * Get interaction logs for a conversation (alias for compatibility)
      */
     getInteractionsByConversationId(conversationId: string): Promise<InteractionLog[]>;
     /**
-     * Soft delete interaction logs by marking them as reset
+     * Soft delete interaction logs (for compatibility - actually deletes them)
      */
     softDeleteInteractionLogs(conversationId: string): Promise<void>;
     /**
-     * Close database connection
+     * Reset conversation state (for testing)
      */
-    close(): Promise<void>;
+    resetConversationState(conversationId: string): Promise<void>;
     /**
-     * Check if database is initialized
+     * Close database connection
      */
-    isInitialized(): boolean;
+    close(): Promise<void>;
 }

package/dist/database.js

@@ -2,9 +2,9 @@
  * Database Manager
  *
  * Handles SQLite database operations for conversation state persistence.
- * Uses better-sqlite3 for reliable cross-platform native bindings.
+ * Uses @sqlite.org/sqlite-wasm for reliable cross-platform WebAssembly bindings.
  */
-import BetterSqlite3 from 'better-sqlite3';
+import sqlite3InitModule from '@sqlite.org/sqlite-wasm';
 import { mkdir } from 'node:fs/promises';
 import { dirname } from 'node:path';
 import { createLogger } from './logger.js';
@@ -14,6 +14,7 @@ const logger = createLogger('Database');
  */
 export class Database {
     db = null;
+    sqlite3 = null;
     dbPath;
     constructor(dbPath) {
         this.dbPath = dbPath;
@@ -23,15 +24,19 @@ export class Database {
      */
     async initialize() {
         try {
-            // Ensure directory exists
-            const dbDir = dirname(this.dbPath);
-            await mkdir(dbDir, { recursive: true });
-            logger.debug('Database directory ensured', { dbDir });
-            // Create database connection
-            this.db = new BetterSqlite3(this.dbPath);
-            logger.debug('Database connection established');
+            // Initialize SQLite WASM
+            this.sqlite3 = await sqlite3InitModule();
+            // Always use in-memory database (sqlite-wasm Node.js limitation)
+            this.db = new this.sqlite3.oo1.DB();
+            logger.debug('Database connection established (in-memory)', {
+                originalPath: this.dbPath,
+            });
             // Create tables
             await this.createTables();
+            // Load existing data from file if it exists
+            if (this.dbPath !== ':memory:' && this.dbPath) {
+                await this.loadFromFile();
+            }
             logger.info('Database initialized successfully', { dbPath: this.dbPath });
         }
         catch (error) {
@@ -39,6 +44,76 @@ export class Database {
             throw error;
         }
     }
+    /**
+     * Load database content from file
+     */
+    async loadFromFile() {
+        if (!this.db || !this.dbPath || this.dbPath === ':memory:') {
+            return;
+        }
+        try {
+            const { readFile, access } = await import('node:fs/promises');
+            await access(this.dbPath);
+            const data = await readFile(this.dbPath);
+            if (data.length > 0) {
+                // Close current in-memory DB and create new one from file data
+                this.db.close();
+                // Create new DB and deserialize data into it
+                //eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+                this.db = new this.sqlite3.oo1.DB();
+                if (!this.db.pointer) {
+                    throw new Error('Failed to create database');
+                }
+                // Convert Buffer to Uint8Array
+                const uint8Data = new Uint8Array(data);
+                //eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+                const wasmPtr = this.sqlite3.wasm.allocFromTypedArray(uint8Data);
+                //eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+                this.sqlite3.capi.sqlite3_deserialize(this.db.pointer, 'main', wasmPtr, data.length, data.length, 0x01 // SQLITE_DESERIALIZE_FREEONCLOSE
+                );
+                logger.debug('Loaded database from file', {
+                    dbPath: this.dbPath,
+                    size: data.length,
+                });
+            }
+        }
+        catch {
+            // File doesn't exist - that's OK for new databases
+            logger.debug('No existing database file to load', {
+                dbPath: this.dbPath,
+            });
+        }
+    }
+    /**
+     * Save database content to file
+     */
+    async saveToFile() {
+        if (!this.db || !this.dbPath || this.dbPath === ':memory:') {
+            return;
+        }
+        try {
+            const { writeFile } = await import('node:fs/promises');
+            const dbDir = dirname(this.dbPath);
+            await mkdir(dbDir, { recursive: true });
+            // Export database to Uint8Array and save to file
+            if (!this.db.pointer) {
+                throw new Error('Database pointer is invalid');
+            }
+            //eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+            const data = this.sqlite3.capi.sqlite3_js_db_export(this.db.pointer);
+            await writeFile(this.dbPath, data);
+            logger.debug('Saved database to file', {
+                dbPath: this.dbPath,
+                size: data.length,
+            });
+        }
+        catch (error) {
+            logger.warn('Failed to save database to file', {
+                error: error,
+                dbPath: this.dbPath,
+            });
+        }
+    }
     /**
      * Create database tables if they don't exist
      */
@@ -69,14 +144,12 @@ export class Database {
         responseData TEXT NOT NULL,
         currentPhase TEXT NOT NULL,
         timestamp TEXT NOT NULL,
-        isReset INTEGER DEFAULT 0,
-        resetAt TEXT,
         FOREIGN KEY (conversationId) REFERENCES conversation_state(conversationId)
       )
     `;
         this.db.exec(createConversationStateTable);
         this.db.exec(createInteractionLogTable);
-        logger.debug('Tables created successfully');
+        logger.debug('Database tables created');
     }
     /**
      * Save conversation state to database
@@ -85,84 +158,86 @@ export class Database {
         if (!this.db) {
             throw new Error('Database not initialized');
         }
-        const stmt = this.db.prepare(`
-      INSERT OR REPLACE INTO conversation_state 
-      (conversationId, projectPath, gitBranch, currentPhase, planFilePath, workflowName, 
-       gitCommitConfig, requireReviewsBeforePhaseTransition, createdAt, updatedAt)
-      VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
-    `);
-        stmt.run(state.conversationId, state.projectPath, state.gitBranch, state.currentPhase, state.planFilePath, state.workflowName, state.gitCommitConfig ? JSON.stringify(state.gitCommitConfig) : null, state.requireReviewsBeforePhaseTransition ? 1 : 0, state.createdAt, state.updatedAt);
+        this.db.exec({
+            sql: `INSERT OR REPLACE INTO conversation_state
+            (conversationId, projectPath, gitBranch, currentPhase, planFilePath, workflowName,
+             gitCommitConfig, requireReviewsBeforePhaseTransition, createdAt, updatedAt)
+            VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`,
+            bind: [
+                state.conversationId,
+                state.projectPath,
+                state.gitBranch,
+                state.currentPhase,
+                state.planFilePath,
+                state.workflowName,
+                state.gitCommitConfig ? JSON.stringify(state.gitCommitConfig) : null,
+                state.requireReviewsBeforePhaseTransition ? 1 : 0,
+                state.createdAt,
+                state.updatedAt,
+            ],
+        });
+        // Persist to file
+        await this.saveToFile();
         logger.debug('Conversation state saved', {
             conversationId: state.conversationId,
-            workflowName: state.workflowName,
             currentPhase: state.currentPhase,
         });
     }
     /**
-     * Load conversation state from database
+     * Get conversation state by ID
      */
-    async loadConversationState(conversationId) {
+    async getConversationState(conversationId) {
         if (!this.db) {
             throw new Error('Database not initialized');
         }
-        const stmt = this.db.prepare('SELECT * FROM conversation_state WHERE conversationId = ?');
-        const row = stmt.get(conversationId);
-        if (row) {
-            const state = {
-                conversationId: row.conversationId,
-                projectPath: row.projectPath,
-                gitBranch: row.gitBranch,
-                currentPhase: row.currentPhase,
-                planFilePath: row.planFilePath,
-                workflowName: row.workflowName,
-                gitCommitConfig: row.gitCommitConfig
-                    ? JSON.parse(row.gitCommitConfig)
-                    : undefined,
-                requireReviewsBeforePhaseTransition: row.requireReviewsBeforePhaseTransition === 1,
-                createdAt: row.createdAt,
-                updatedAt: row.updatedAt,
-            };
-            logger.debug('Conversation state loaded', {
-                conversationId,
-                workflowName: state.workflowName,
-                currentPhase: state.currentPhase,
-            });
-            return state;
+        const result = this.db.exec({
+            sql: 'SELECT * FROM conversation_state WHERE conversationId = ?',
+            bind: [conversationId],
+            returnValue: 'resultRows',
+        });
+        if (!result || result.length === 0) {
+            return null;
         }
-        logger.debug('No conversation state found', { conversationId });
-        return null;
+        const row = result[0];
+        return {
+            conversationId: row[0],
+            projectPath: row[1],
+            gitBranch: row[2],
+            currentPhase: row[3],
+            planFilePath: row[4],
+            workflowName: row[5],
+            gitCommitConfig: row[6] ? JSON.parse(row[6]) : null,
+            requireReviewsBeforePhaseTransition: Boolean(row[7]),
+            createdAt: row[8],
+            updatedAt: row[9],
+        };
     }
     /**
-     * Get conversation state by ID (alias for loadConversationState)
+     * Get all conversation states
      */
-    async getConversationState(conversationId) {
-        return this.loadConversationState(conversationId);
-    }
-    /**
-     * List all conversation states
-     */
-    async listConversationStates() {
+    async getAllConversationStates() {
         if (!this.db) {
             throw new Error('Database not initialized');
         }
-        const stmt = this.db.prepare('SELECT * FROM conversation_state ORDER BY updatedAt DESC');
-        const rows = stmt.all();
-        const states = rows.map(row => ({
-            conversationId: row.conversationId,
-            projectPath: row.projectPath,
-            gitBranch: row.gitBranch,
-            currentPhase: row.currentPhase,
-            planFilePath: row.planFilePath,
-            workflowName: row.workflowName,
-            gitCommitConfig: row.gitCommitConfig
-                ? JSON.parse(row.gitCommitConfig)
-                : undefined,
-            requireReviewsBeforePhaseTransition: row.requireReviewsBeforePhaseTransition === 1,
-            createdAt: row.createdAt,
-            updatedAt: row.updatedAt,
+        const result = this.db.exec({
+            sql: 'SELECT * FROM conversation_state ORDER BY updatedAt DESC',
+            returnValue: 'resultRows',
+        });
+        if (!result) {
+            return [];
+        }
+        return result.map(row => ({
+            conversationId: row[0],
+            projectPath: row[1],
+            gitBranch: row[2],
+            currentPhase: row[3],
+            planFilePath: row[4],
+            workflowName: row[5],
+            gitCommitConfig: row[6] ? JSON.parse(row[6]) : null,
+            requireReviewsBeforePhaseTransition: Boolean(row[7]),
+            createdAt: row[8],
+            updatedAt: row[9],
         }));
-        logger.debug('Listed conversation states', { count: states.length });
-        return states;
     }
     /**
      * Delete conversation state
@@ -171,79 +246,103 @@ export class Database {
         if (!this.db) {
             throw new Error('Database not initialized');
         }
-        const stmt = this.db.prepare('DELETE FROM conversation_state WHERE conversationId = ?');
-        const result = stmt.run(conversationId);
-        const deleted = result.changes > 0;
-        logger.debug('Conversation state deletion', { conversationId, deleted });
-        return deleted;
+        this.db.exec({
+            sql: 'DELETE FROM conversation_state WHERE conversationId = ?',
+            bind: [conversationId],
+        });
+        // Persist to file
+        await this.saveToFile();
+        logger.debug('Conversation state deleted', { conversationId });
+        return true;
     }
     /**
-     * Log an interaction to the database
+     * Log interaction
      */
     async logInteraction(log) {
         if (!this.db) {
             throw new Error('Database not initialized');
         }
-        const stmt = this.db.prepare(`
-      INSERT INTO interaction_log 
-      (conversationId, toolName, inputParams, responseData, currentPhase, timestamp, isReset, resetAt)
-      VALUES (?, ?, ?, ?, ?, ?, ?, ?)
-    `);
-        stmt.run(log.conversationId, log.toolName, log.inputParams, log.responseData, log.currentPhase, log.timestamp, log.isReset ? 1 : 0, log.resetAt || null);
+        this.db.exec({
+            sql: `INSERT INTO interaction_log
+            (conversationId, toolName, inputParams, responseData, currentPhase, timestamp)
+            VALUES (?, ?, ?, ?, ?, ?)`,
+            bind: [
+                log.conversationId,
+                log.toolName,
+                JSON.stringify(log.inputParams),
+                JSON.stringify(log.responseData),
+                log.currentPhase,
+                log.timestamp,
+            ],
+        });
+        // Persist to file
+        await this.saveToFile();
         logger.debug('Interaction logged', {
             conversationId: log.conversationId,
             toolName: log.toolName,
-            timestamp: log.timestamp,
         });
     }
     /**
-     * Get interactions by conversation ID
+     * Get interaction logs for a conversation
      */
-    async getInteractionsByConversationId(conversationId) {
+    async getInteractionLogs(conversationId) {
         if (!this.db) {
             throw new Error('Database not initialized');
         }
-        const stmt = this.db.prepare(`
-      SELECT * FROM interaction_log 
-      WHERE conversationId = ? AND (isReset = 0 OR isReset IS NULL)
-      ORDER BY timestamp ASC
-    `);
-        const rows = stmt.all(conversationId);
-        const logs = rows.map(row => ({
-            id: row.id,
-            conversationId: row.conversationId,
-            toolName: row.toolName,
-            inputParams: row.inputParams,
-            responseData: row.responseData,
-            currentPhase: row.currentPhase,
-            timestamp: row.timestamp,
-            isReset: row.isReset === 1,
-            resetAt: row.resetAt,
-        }));
-        logger.debug('Retrieved interaction logs', {
-            conversationId,
-            count: logs.length,
+        const result = this.db.exec({
+            sql: 'SELECT * FROM interaction_log WHERE conversationId = ? ORDER BY timestamp ASC',
+            bind: [conversationId],
+            returnValue: 'resultRows',
         });
-        return logs;
+        if (!result) {
+            return [];
+        }
+        return result.map(row => ({
+            id: row[0],
+            conversationId: row[1],
+            toolName: row[2],
+            inputParams: JSON.parse(row[3]),
+            responseData: JSON.parse(row[4]),
+            currentPhase: row[5],
+            timestamp: row[6],
+        }));
+    }
+    /**
+     * Get interaction logs for a conversation (alias for compatibility)
+     */
+    async getInteractionsByConversationId(conversationId) {
+        return this.getInteractionLogs(conversationId);
     }
     /**
-     * Soft delete interaction logs by marking them as reset
+     * Soft delete interaction logs (for compatibility - actually deletes them)
      */
     async softDeleteInteractionLogs(conversationId) {
+        if (!this.db) {
+            throw new Error('Database not initialized');
+        }
+        this.db.exec({
+            sql: 'DELETE FROM interaction_log WHERE conversationId = ?',
+            bind: [conversationId],
+        });
+        // Persist to file
+        await this.saveToFile();
+        logger.debug('Interaction logs deleted', { conversationId });
+    }
+    /**
+     * Reset conversation state (for testing)
+     */
+    async resetConversationState(conversationId) {
         if (!this.db) {
             throw new Error('Database not initialized');
         }
         const resetAt = new Date().toISOString();
-        const stmt = this.db.prepare(`
-      UPDATE interaction_log 
-      SET isReset = 1, resetAt = ?
-      WHERE conversationId = ? AND (isReset = 0 OR isReset IS NULL)
-    `);
-        const result = stmt.run(resetAt, conversationId);
-        logger.debug('Soft deleted interaction logs', {
-            conversationId,
-            affectedRows: result.changes,
+        this.db.exec({
+            sql: 'UPDATE conversation_state SET updatedAt = ? WHERE conversationId = ?',
+            bind: [resetAt, conversationId],
         });
+        // Persist to file
+        await this.saveToFile();
+        logger.debug('Conversation state reset', { conversationId, resetAt });
     }
     /**
      * Close database connection
@@ -255,11 +354,5 @@ export class Database {
             logger.debug('Database connection closed');
         }
     }
-    /**
-     * Check if database is initialized
-     */
-    isInitialized() {
-        return this.db !== null;
-    }
 }
 //# sourceMappingURL=database.js.map

package/dist/database.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@codemcp/workflows-core",
-  "version": "3.1.21-fix-build-after-monorepo.0",
+  "version": "3.1.21-fix-build-after-monorepo.1",
   "main": "dist/index.js",
   "types": "dist/index.d.ts",
   "type": "module",

package/src/database.ts

@@ -2,10 +2,13 @@
  * Database Manager
  *
  * Handles SQLite database operations for conversation state persistence.
- * Uses better-sqlite3 for reliable cross-platform native bindings.
+ * Uses @sqlite.org/sqlite-wasm for reliable cross-platform WebAssembly bindings.
  */
 
-import BetterSqlite3 from 'better-sqlite3';
+import sqlite3InitModule, {
+  type Database as SqliteDatabase,
+  type Sqlite3Static,
+} from '@sqlite.org/sqlite-wasm';
 import { mkdir } from 'node:fs/promises';
 import { dirname } from 'node:path';
 import { createLogger } from './logger.js';
@@ -17,7 +20,8 @@ const logger = createLogger('Database');
  * Database connection and operations manager
  */
 export class Database {
-  private db: BetterSqlite3.Database | null = null;
+  private db: SqliteDatabase | null = null;
+  private sqlite3: Sqlite3Static | null = null;
   private dbPath: string;
 
   constructor(dbPath: string) {
@@ -29,17 +33,23 @@ export class Database {
    */
   async initialize(): Promise<void> {
     try {
-      // Ensure directory exists
-      const dbDir = dirname(this.dbPath);
-      await mkdir(dbDir, { recursive: true });
-      logger.debug('Database directory ensured', { dbDir });
+      // Initialize SQLite WASM
+      this.sqlite3 = await sqlite3InitModule();
 
-      // Create database connection
-      this.db = new BetterSqlite3(this.dbPath);
-      logger.debug('Database connection established');
+      // Always use in-memory database (sqlite-wasm Node.js limitation)
+      this.db = new this.sqlite3.oo1.DB();
+      logger.debug('Database connection established (in-memory)', {
+        originalPath: this.dbPath,
+      });
 
       // Create tables
       await this.createTables();
+
+      // Load existing data from file if it exists
+      if (this.dbPath !== ':memory:' && this.dbPath) {
+        await this.loadFromFile();
+      }
+
       logger.info('Database initialized successfully', { dbPath: this.dbPath });
     } catch (error) {
       logger.error('Failed to initialize database', error as Error);
@@ -47,6 +57,90 @@ export class Database {
     }
   }
 
+  /**
+   * Load database content from file
+   */
+  private async loadFromFile(): Promise<void> {
+    if (!this.db || !this.dbPath || this.dbPath === ':memory:') {
+      return;
+    }
+
+    try {
+      const { readFile, access } = await import('node:fs/promises');
+      await access(this.dbPath);
+
+      const data = await readFile(this.dbPath);
+      if (data.length > 0) {
+        // Close current in-memory DB and create new one from file data
+        this.db.close();
+        // Create new DB and deserialize data into it
+
+        //eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+        this.db = new this.sqlite3!.oo1.DB();
+        if (!this.db.pointer) {
+          throw new Error('Failed to create database');
+        }
+
+        // Convert Buffer to Uint8Array
+        const uint8Data = new Uint8Array(data);
+
+        //eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+        const wasmPtr = this.sqlite3!.wasm.allocFromTypedArray(uint8Data);
+
+        //eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+        this.sqlite3!.capi.sqlite3_deserialize(
+          this.db.pointer,
+          'main',
+          wasmPtr,
+          data.length,
+          data.length,
+          0x01 // SQLITE_DESERIALIZE_FREEONCLOSE
+        );
+        logger.debug('Loaded database from file', {
+          dbPath: this.dbPath,
+          size: data.length,
+        });
+      }
+    } catch {
+      // File doesn't exist - that's OK for new databases
+      logger.debug('No existing database file to load', {
+        dbPath: this.dbPath,
+      });
+    }
+  }
+
+  /**
+   * Save database content to file
+   */
+  private async saveToFile(): Promise<void> {
+    if (!this.db || !this.dbPath || this.dbPath === ':memory:') {
+      return;
+    }
+
+    try {
+      const { writeFile } = await import('node:fs/promises');
+      const dbDir = dirname(this.dbPath);
+      await mkdir(dbDir, { recursive: true });
+
+      // Export database to Uint8Array and save to file
+      if (!this.db.pointer) {
+        throw new Error('Database pointer is invalid');
+      }
+      //eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+      const data = this.sqlite3!.capi.sqlite3_js_db_export(this.db.pointer);
+      await writeFile(this.dbPath, data);
+      logger.debug('Saved database to file', {
+        dbPath: this.dbPath,
+        size: data.length,
+      });
+    } catch (error) {
+      logger.warn('Failed to save database to file', {
+        error: error as Error,
+        dbPath: this.dbPath,
+      });
+    }
+  }
+
   /**
    * Create database tables if they don't exist
    */
@@ -79,15 +173,14 @@ export class Database {
         responseData TEXT NOT NULL,
         currentPhase TEXT NOT NULL,
         timestamp TEXT NOT NULL,
-        isReset INTEGER DEFAULT 0,
-        resetAt TEXT,
         FOREIGN KEY (conversationId) REFERENCES conversation_state(conversationId)
       )
     `;
 
     this.db.exec(createConversationStateTable);
     this.db.exec(createInteractionLogTable);
-    logger.debug('Tables created successfully');
+
+    logger.debug('Database tables created');
   }
 
   /**
@@ -98,141 +191,98 @@ export class Database {
       throw new Error('Database not initialized');
     }
 
-    const stmt = this.db.prepare(`
-      INSERT OR REPLACE INTO conversation_state 
-      (conversationId, projectPath, gitBranch, currentPhase, planFilePath, workflowName, 
-       gitCommitConfig, requireReviewsBeforePhaseTransition, createdAt, updatedAt)
-      VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
-    `);
-
-    stmt.run(
-      state.conversationId,
-      state.projectPath,
-      state.gitBranch,
-      state.currentPhase,
-      state.planFilePath,
-      state.workflowName,
-      state.gitCommitConfig ? JSON.stringify(state.gitCommitConfig) : null,
-      state.requireReviewsBeforePhaseTransition ? 1 : 0,
-      state.createdAt,
-      state.updatedAt
-    );
+    this.db.exec({
+      sql: `INSERT OR REPLACE INTO conversation_state
+            (conversationId, projectPath, gitBranch, currentPhase, planFilePath, workflowName,
+             gitCommitConfig, requireReviewsBeforePhaseTransition, createdAt, updatedAt)
+            VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`,
+      bind: [
+        state.conversationId,
+        state.projectPath,
+        state.gitBranch,
+        state.currentPhase,
+        state.planFilePath,
+        state.workflowName,
+        state.gitCommitConfig ? JSON.stringify(state.gitCommitConfig) : null,
+        state.requireReviewsBeforePhaseTransition ? 1 : 0,
+        state.createdAt,
+        state.updatedAt,
+      ],
+    });
+
+    // Persist to file
+    await this.saveToFile();
 
     logger.debug('Conversation state saved', {
       conversationId: state.conversationId,
-      workflowName: state.workflowName,
       currentPhase: state.currentPhase,
     });
   }
 
   /**
-   * Load conversation state from database
+   * Get conversation state by ID
    */
-  async loadConversationState(
+  async getConversationState(
     conversationId: string
   ): Promise<ConversationState | null> {
     if (!this.db) {
       throw new Error('Database not initialized');
     }
 
-    const stmt = this.db.prepare(
-      'SELECT * FROM conversation_state WHERE conversationId = ?'
-    );
-    const row = stmt.get(conversationId) as
-      | {
-          conversationId: string;
-          projectPath: string;
-          gitBranch: string;
-          currentPhase: string;
-          planFilePath: string;
-          workflowName: string;
-          gitCommitConfig: string;
-          requireReviewsBeforePhaseTransition: number;
-          createdAt: string;
-          updatedAt: string;
-        }
-      | undefined;
-
-    if (row) {
-      const state: ConversationState = {
-        conversationId: row.conversationId,
-        projectPath: row.projectPath,
-        gitBranch: row.gitBranch,
-        currentPhase: row.currentPhase,
-        planFilePath: row.planFilePath,
-        workflowName: row.workflowName,
-        gitCommitConfig: row.gitCommitConfig
-          ? JSON.parse(row.gitCommitConfig)
-          : undefined,
-        requireReviewsBeforePhaseTransition:
-          row.requireReviewsBeforePhaseTransition === 1,
-        createdAt: row.createdAt,
-        updatedAt: row.updatedAt,
-      };
-
-      logger.debug('Conversation state loaded', {
-        conversationId,
-        workflowName: state.workflowName,
-        currentPhase: state.currentPhase,
-      });
-      return state;
-    }
+    const result = this.db.exec({
+      sql: 'SELECT * FROM conversation_state WHERE conversationId = ?',
+      bind: [conversationId],
+      returnValue: 'resultRows',
+    });
 
-    logger.debug('No conversation state found', { conversationId });
-    return null;
-  }
+    if (!result || result.length === 0) {
+      return null;
+    }
 
-  /**
-   * Get conversation state by ID (alias for loadConversationState)
-   */
-  async getConversationState(
-    conversationId: string
-  ): Promise<ConversationState | null> {
-    return this.loadConversationState(conversationId);
+    const row = result[0];
+    return {
+      conversationId: row[0] as string,
+      projectPath: row[1] as string,
+      gitBranch: row[2] as string,
+      currentPhase: row[3] as string,
+      planFilePath: row[4] as string,
+      workflowName: row[5] as string,
+      gitCommitConfig: row[6] ? JSON.parse(row[6] as string) : null,
+      requireReviewsBeforePhaseTransition: Boolean(row[7]),
+      createdAt: row[8] as string,
+      updatedAt: row[9] as string,
+    };
   }
 
   /**
-   * List all conversation states
+   * Get all conversation states
    */
-  async listConversationStates(): Promise<ConversationState[]> {
+  async getAllConversationStates(): Promise<ConversationState[]> {
     if (!this.db) {
       throw new Error('Database not initialized');
     }
 
-    const stmt = this.db.prepare(
-      'SELECT * FROM conversation_state ORDER BY updatedAt DESC'
-    );
-    const rows = stmt.all() as {
-      conversationId: string;
-      projectPath: string;
-      gitBranch: string;
-      currentPhase: string;
-      planFilePath: string;
-      workflowName: string;
-      gitCommitConfig: string;
-      requireReviewsBeforePhaseTransition: number;
-      createdAt: string;
-      updatedAt: string;
-    }[];
-
-    const states = rows.map(row => ({
-      conversationId: row.conversationId,
-      projectPath: row.projectPath,
-      gitBranch: row.gitBranch,
-      currentPhase: row.currentPhase,
-      planFilePath: row.planFilePath,
-      workflowName: row.workflowName,
-      gitCommitConfig: row.gitCommitConfig
-        ? JSON.parse(row.gitCommitConfig)
-        : undefined,
-      requireReviewsBeforePhaseTransition:
-        row.requireReviewsBeforePhaseTransition === 1,
-      createdAt: row.createdAt,
-      updatedAt: row.updatedAt,
-    }));
+    const result = this.db.exec({
+      sql: 'SELECT * FROM conversation_state ORDER BY updatedAt DESC',
+      returnValue: 'resultRows',
+    });
 
-    logger.debug('Listed conversation states', { count: states.length });
-    return states;
+    if (!result) {
+      return [];
+    }
+
+    return result.map(row => ({
+      conversationId: row[0] as string,
+      projectPath: row[1] as string,
+      gitBranch: row[2] as string,
+      currentPhase: row[3] as string,
+      planFilePath: row[4] as string,
+      workflowName: row[5] as string,
+      gitCommitConfig: row[6] ? JSON.parse(row[6] as string) : null,
+      requireReviewsBeforePhaseTransition: Boolean(row[7]),
+      createdAt: row[8] as string,
+      updatedAt: row[9] as string,
+    }));
   }
 
   /**
@@ -243,114 +293,125 @@ export class Database {
       throw new Error('Database not initialized');
     }
 
-    const stmt = this.db.prepare(
-      'DELETE FROM conversation_state WHERE conversationId = ?'
-    );
-    const result = stmt.run(conversationId);
+    this.db.exec({
+      sql: 'DELETE FROM conversation_state WHERE conversationId = ?',
+      bind: [conversationId],
+    });
 
-    const deleted = result.changes > 0;
-    logger.debug('Conversation state deletion', { conversationId, deleted });
-    return deleted;
+    // Persist to file
+    await this.saveToFile();
+
+    logger.debug('Conversation state deleted', { conversationId });
+    return true;
   }
 
   /**
-   * Log an interaction to the database
+   * Log interaction
    */
   async logInteraction(log: InteractionLog): Promise<void> {
     if (!this.db) {
       throw new Error('Database not initialized');
     }
 
-    const stmt = this.db.prepare(`
-      INSERT INTO interaction_log 
-      (conversationId, toolName, inputParams, responseData, currentPhase, timestamp, isReset, resetAt)
-      VALUES (?, ?, ?, ?, ?, ?, ?, ?)
-    `);
-
-    stmt.run(
-      log.conversationId,
-      log.toolName,
-      log.inputParams,
-      log.responseData,
-      log.currentPhase,
-      log.timestamp,
-      log.isReset ? 1 : 0,
-      log.resetAt || null
-    );
+    this.db.exec({
+      sql: `INSERT INTO interaction_log
+            (conversationId, toolName, inputParams, responseData, currentPhase, timestamp)
+            VALUES (?, ?, ?, ?, ?, ?)`,
+      bind: [
+        log.conversationId,
+        log.toolName,
+        JSON.stringify(log.inputParams),
+        JSON.stringify(log.responseData),
+        log.currentPhase,
+        log.timestamp,
+      ],
+    });
+
+    // Persist to file
+    await this.saveToFile();
 
     logger.debug('Interaction logged', {
       conversationId: log.conversationId,
       toolName: log.toolName,
-      timestamp: log.timestamp,
     });
   }
 
   /**
-   * Get interactions by conversation ID
+   * Get interaction logs for a conversation
+   */
+  async getInteractionLogs(conversationId: string): Promise<InteractionLog[]> {
+    if (!this.db) {
+      throw new Error('Database not initialized');
+    }
+
+    const result = this.db.exec({
+      sql: 'SELECT * FROM interaction_log WHERE conversationId = ? ORDER BY timestamp ASC',
+      bind: [conversationId],
+      returnValue: 'resultRows',
+    });
+
+    if (!result) {
+      return [];
+    }
+
+    return result.map(row => ({
+      id: row[0] as number,
+      conversationId: row[1] as string,
+      toolName: row[2] as string,
+      inputParams: JSON.parse(row[3] as string),
+      responseData: JSON.parse(row[4] as string),
+      currentPhase: row[5] as string,
+      timestamp: row[6] as string,
+    }));
+  }
+
+  /**
+   * Get interaction logs for a conversation (alias for compatibility)
    */
   async getInteractionsByConversationId(
     conversationId: string
   ): Promise<InteractionLog[]> {
+    return this.getInteractionLogs(conversationId);
+  }
+
+  /**
+   * Soft delete interaction logs (for compatibility - actually deletes them)
+   */
+  async softDeleteInteractionLogs(conversationId: string): Promise<void> {
     if (!this.db) {
       throw new Error('Database not initialized');
     }
 
-    const stmt = this.db.prepare(`
-      SELECT * FROM interaction_log 
-      WHERE conversationId = ? AND (isReset = 0 OR isReset IS NULL)
-      ORDER BY timestamp ASC
-    `);
-    const rows = stmt.all(conversationId) as {
-      id: number;
-      conversationId: string;
-      toolName: string;
-      inputParams: string;
-      responseData: string;
-      currentPhase: string;
-      timestamp: string;
-      isReset: number;
-      resetAt: string;
-    }[];
-
-    const logs = rows.map(row => ({
-      id: row.id,
-      conversationId: row.conversationId,
-      toolName: row.toolName,
-      inputParams: row.inputParams,
-      responseData: row.responseData,
-      currentPhase: row.currentPhase,
-      timestamp: row.timestamp,
-      isReset: row.isReset === 1,
-      resetAt: row.resetAt,
-    }));
-
-    logger.debug('Retrieved interaction logs', {
-      conversationId,
-      count: logs.length,
+    this.db.exec({
+      sql: 'DELETE FROM interaction_log WHERE conversationId = ?',
+      bind: [conversationId],
     });
-    return logs;
+
+    // Persist to file
+    await this.saveToFile();
+
+    logger.debug('Interaction logs deleted', { conversationId });
   }
 
   /**
-   * Soft delete interaction logs by marking them as reset
+   * Reset conversation state (for testing)
    */
-  async softDeleteInteractionLogs(conversationId: string): Promise<void> {
+  async resetConversationState(conversationId: string): Promise<void> {
     if (!this.db) {
       throw new Error('Database not initialized');
     }
 
     const resetAt = new Date().toISOString();
-    const stmt = this.db.prepare(`
-      UPDATE interaction_log 
-      SET isReset = 1, resetAt = ?
-      WHERE conversationId = ? AND (isReset = 0 OR isReset IS NULL)
-    `);
-
-    const result = stmt.run(resetAt, conversationId);
-    logger.debug('Soft deleted interaction logs', {
-      conversationId,
-      affectedRows: result.changes,
+
+    this.db.exec({
+      sql: 'UPDATE conversation_state SET updatedAt = ? WHERE conversationId = ?',
+      bind: [resetAt, conversationId],
     });
+
+    // Persist to file
+    await this.saveToFile();
+
+    logger.debug('Conversation state reset', { conversationId, resetAt });
   }
 
   /**
@@ -363,11 +424,4 @@ export class Database {
       logger.debug('Database connection closed');
     }
   }
-
-  /**
-   * Check if database is initialized
-   */
-  isInitialized(): boolean {
-    return this.db !== null;
-  }
 }