@cluesmith/codev 3.2.2 → 3.2.4

package/dist/lib/protocol-drift-audit.js

@@ -0,0 +1,217 @@
+/**
+ * Protocol-file drift audit (#1210).
+ *
+ * Detects two silent failure modes of the four-tier resolver
+ * (`.codev/` → `codev/` → cache → installed skeleton):
+ *
+ *  1. **Shadow drift** — a project-local copy (tier-1 `.codev/` or tier-2 `codev/`)
+ *     of a framework file that ALSO ships in the installed skeleton. The resolver
+ *     serves the local copy, so a stale snapshot of an old upstream default keeps
+ *     winning forever, silently, even after the package ships a fix. This audit
+ *     diffs each local copy against its skeleton counterpart and classifies it:
+ *       - `identical` → a redundant copy that adds nothing but risk (safe to remove;
+ *         resolution then falls back to the package).
+ *       - `differs`   → "customized or stale? — adjudicate" (a human must decide;
+ *         we NEVER auto-act).
+ *
+ *  2. **Skeleton staleness** — the installed `@cluesmith/codev` package is itself a
+ *     version behind npm `latest`, so even NON-shadowed resolution serves pre-fix
+ *     framework files. Reported as an explicit `installed X; latest Y` pair
+ *     (a computed "N behind" distance is not crisply testable), best-effort and
+ *     offline-tolerant.
+ *
+ * Report-only: this module performs NO writes to disk. Adjudication stays human —
+ * local copies may be deliberate customizations (that is the resolver's whole point).
+ *
+ * Mirrors the existing doctor audit precedents: `pr-gate-audit.ts` (#943) and
+ * `framework-ref-audit.ts` (#1011) — a pure lib returning findings + formatters,
+ * consumed by `commands/doctor.ts`.
+ */
+import * as fs from 'node:fs';
+import * as path from 'node:path';
+import { createHash } from 'node:crypto';
+import { spawnSync } from 'node:child_process';
+import { getSkeletonDir, listSkeletonFiles, resolveCodevFile, findWorkspaceRoot } from './skeleton.js';
+import { version as installedVersion } from '../version.js';
+/**
+ * The framework subtrees whose files ship in the skeleton and resolve via the
+ * four-tier resolver. Pinned scan set (per the spec) — prompts and per-protocol
+ * templates live WITHIN `protocols/`, so they are covered transitively.
+ *
+ * Maintenance point: a new top-level framework subtree must be added here (same
+ * shape as `PR_PRODUCING_PROTOCOLS` in pr-gate-audit). `codev/resources/` is
+ * deliberately EXCLUDED — those are user-evolved files (arch.md, lessons-learned.md,
+ * and their -critical companions), not framework files, and must never be flagged.
+ */
+export const FRAMEWORK_DRIFT_DIRS = ['protocols', 'consult-types', 'roles'];
+/** Only these extensions are framework files worth diffing. */
+const FRAMEWORK_EXTS = new Set(['.md', '.json']);
+/** The two project-local override roots, in resolver-precedence order (tier 1 first). */
+const OVERRIDE_TIERS = ['.codev', 'codev'];
+/** SHA-256 of a file's raw bytes (no text decoding — EOL/trailing-newline sensitive). */
+function hashBytes(filePath) {
+    return createHash('sha256').update(fs.readFileSync(filePath)).digest('hex');
+}
+/**
+ * Skeleton-relative framework files under a scan-set subtree, filtered to
+ * framework extensions. Enumerated via the resolver's own `listSkeletonFiles`
+ * (over `getSkeletonDir()`) so this audit and runtime resolution agree on exactly
+ * what the skeleton is. Returned paths (e.g. `protocols/spir/protocol.md`) are
+ * both the skeleton-relative and the override-relative path.
+ */
+function skeletonFrameworkFiles(sub) {
+    return listSkeletonFiles(sub).filter((rel) => FRAMEWORK_EXTS.has(path.extname(rel)));
+}
+/**
+ * Audit a project for shadow drift against the installed skeleton.
+ *
+ * For every framework file in the skeleton (under FRAMEWORK_DRIFT_DIRS), checks
+ * whether a local copy exists in `.codev/` and/or `codev/`; for each local copy
+ * found, byte-compares it against the skeleton file and records a finding. Returns
+ * one finding per local copy (so a file present in BOTH tiers yields two findings).
+ *
+ * @param workspaceRoot - project root (auto-detected via findWorkspaceRoot if omitted)
+ */
+export function auditProtocolDrift(workspaceRoot) {
+    const root = workspaceRoot ?? findWorkspaceRoot();
+    const skeletonDir = getSkeletonDir();
+    const findings = [];
+    for (const sub of FRAMEWORK_DRIFT_DIRS) {
+        for (const rel of skeletonFrameworkFiles(sub)) {
+            const skeletonPath = path.join(skeletonDir, rel);
+            let skeletonHash;
+            try {
+                skeletonHash = hashBytes(skeletonPath);
+            }
+            catch {
+                continue; // unreadable skeleton file — nothing to diff against
+            }
+            // Which copy does the resolver actually pick? (absolute path or null)
+            const resolved = resolveCodevFile(rel, root);
+            const resolvedAbs = resolved ? path.resolve(resolved) : null;
+            for (const tier of OVERRIDE_TIERS) {
+                const localPath = path.join(root, tier, rel);
+                if (!fs.existsSync(localPath) || !fs.statSync(localPath).isFile())
+                    continue;
+                const status = hashBytes(localPath) === skeletonHash ? 'identical' : 'differs';
+                findings.push({
+                    relativePath: rel,
+                    tier,
+                    status,
+                    isResolvedWinner: resolvedAbs === path.resolve(localPath),
+                });
+            }
+        }
+    }
+    return findings;
+}
+/**
+ * Whether the project has ANY local copy of a scanned skeleton file, in EITHER
+ * override root. Cheap existence-only scan (no hashing) used for the no-op gate:
+ * the existing `hasLocalOverride()` only checks tier-2 `codev/`, so drift detection
+ * must check both tiers itself.
+ */
+export function hasFrameworkShadows(workspaceRoot) {
+    const root = workspaceRoot ?? findWorkspaceRoot();
+    for (const sub of FRAMEWORK_DRIFT_DIRS) {
+        for (const rel of skeletonFrameworkFiles(sub)) {
+            for (const tier of OVERRIDE_TIERS) {
+                if (fs.existsSync(path.join(root, tier, rel)))
+                    return true;
+            }
+        }
+    }
+    return false;
+}
+/** Parse a dotted version into numeric parts; non-numeric segments → 0. */
+function parseVersion(v) {
+    return v.split('.').map((p) => parseInt(p.replace(/[^0-9]/g, ''), 10) || 0);
+}
+/** True if `a` is strictly older than `b` (semver-ish, major.minor.patch). */
+function versionLt(a, b) {
+    const pa = parseVersion(a);
+    const pb = parseVersion(b);
+    for (let i = 0; i < Math.max(pa.length, pb.length); i++) {
+        const x = pa[i] || 0;
+        const y = pb[i] || 0;
+        if (x < y)
+            return true;
+        if (x > y)
+            return false;
+    }
+    return false;
+}
+/** Bound on the npm-latest lookup (ms). The registry can't stall doctor beyond this. */
+export const NPM_LATEST_TIMEOUT_MS = 2500;
+/**
+ * Default npm-latest lookup: `npm view @cluesmith/codev version`. Bounded by
+ * `NPM_LATEST_TIMEOUT_MS` (spawnSync kills the child past it) and offline-tolerant —
+ * an unreachable registry, non-zero exit, missing `npm`, or unparsable output all
+ * yield `null` rather than throwing or hanging. Exported so tests can assert the
+ * real bounded/offline behavior (not just an injected stub).
+ */
+export function fetchLatestVersion() {
+    try {
+        const r = spawnSync('npm', ['view', '@cluesmith/codev', 'version'], {
+            encoding: 'utf-8',
+            timeout: NPM_LATEST_TIMEOUT_MS,
+            stdio: 'pipe',
+        });
+        if (r.status === 0 && r.stdout) {
+            const v = r.stdout.trim();
+            return /^\d+\.\d+\.\d+/.test(v) ? v : null;
+        }
+        return null;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Compare the installed package version against npm `latest`. Never throws and
+ * never hangs beyond the fetch timeout — an unreachable registry yields
+ * `{ latest: null, behind: false, note }` so doctor stays usable offline.
+ *
+ * @param fetchLatest - injectable latest-version source (defaults to `npm view`)
+ */
+export function checkSkeletonStaleness(fetchLatest = fetchLatestVersion) {
+    const installed = installedVersion;
+    let latest = null;
+    try {
+        latest = fetchLatest();
+    }
+    catch {
+        latest = null;
+    }
+    if (!latest) {
+        return { installed, latest: null, behind: false, note: 'could not check (offline?)' };
+    }
+    return { installed, latest, behind: versionLt(installed, latest) };
+}
+/**
+ * Render a shadow-drift finding for doctor output.
+ *
+ * @param skeletonVersion - installed skeleton/package version; when provided it is
+ *   named in the line so the human can tell WHICH skeleton the local copy diverged
+ *   from (the spec requires the adjudication warning to name the package version).
+ */
+export function formatDriftFinding(f, skeletonVersion) {
+    const loc = `${f.tier}/${f.relativePath}`;
+    const ver = skeletonVersion ? ` v${skeletonVersion}` : '';
+    if (f.status === 'identical') {
+        return `${loc} — byte-identical redundant copy of the installed skeleton${ver}; safe to remove (resolution then falls back to the package)`;
+    }
+    const winner = f.isResolvedWinner ? ' [resolved — this copy is live]' : '';
+    return `${loc} — differs from installed skeleton${ver}; customized or stale? — adjudicate${winner}`;
+}
+/** Render the staleness result for doctor output. */
+export function formatStaleness(s) {
+    if (s.latest === null) {
+        return `installed ${s.installed}; latest: ${s.note ?? 'unknown'}`;
+    }
+    if (s.behind) {
+        return `installed ${s.installed}; latest ${s.latest} — behind (run: codev update)`;
+    }
+    return `installed ${s.installed}; latest ${s.latest} (up to date)`;
+}
+//# sourceMappingURL=protocol-drift-audit.js.map

package/dist/lib/protocol-drift-audit.js.map

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package/dist/lib/scaffold.d.ts

@@ -107,13 +107,20 @@ interface CopySkillsOptions {
     skipExisting?: boolean;
 }
 interface CopySkillsResult {
+    /** Project-relative provider-qualified paths, including a trailing slash. */
     copied: string[];
+    /** Project-relative provider-qualified paths, including a trailing slash. */
     skipped: string[];
-    directoryCreated: boolean;
+    /** Project-relative provider skill roots that were created. */
+    directoriesCreated: string[];
 }
+export declare const SKILL_PROVIDERS: readonly ["claude", "codex"];
 /**
- * Copy .claude/skills/ from skeleton to project root.
- * Skills are Claude Code slash commands that provide contextual guidance.
+ * Copy provider-native skill trees from the skeleton to the project root.
+ *
+ * Each skill directory is the preservation boundary: skipExisting leaves an
+ * existing skill completely untouched while still backfilling missing skills
+ * for either provider.
  */
 export declare function copySkills(targetDir: string, skeletonDir: string, options?: CopySkillsOptions): CopySkillsResult;
 interface CopyRolesOptions {

package/dist/lib/scaffold.d.ts.map

@@ -1 +1 @@
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package/dist/lib/scaffold.js

@@ -231,41 +231,44 @@ function copyDirRecursive(src, dest) {
         }
     }
 }
+export const SKILL_PROVIDERS = ['claude', 'codex'];
 /**
- * Copy .claude/skills/ from skeleton to project root.
- * Skills are Claude Code slash commands that provide contextual guidance.
+ * Copy provider-native skill trees from the skeleton to the project root.
+ *
+ * Each skill directory is the preservation boundary: skipExisting leaves an
+ * existing skill completely untouched while still backfilling missing skills
+ * for either provider.
  */
 export function copySkills(targetDir, skeletonDir, options = {}) {
     const { skipExisting = false } = options;
-    const skillsDir = path.join(targetDir, '.claude', 'skills');
-    const srcDir = path.join(skeletonDir, '.claude', 'skills');
     const copied = [];
     const skipped = [];
-    let directoryCreated = false;
-    // Ensure .claude/skills directory exists
-    if (!fs.existsSync(skillsDir)) {
-        fs.mkdirSync(skillsDir, { recursive: true });
-        directoryCreated = true;
-    }
-    // If source directory doesn't exist, return early
-    if (!fs.existsSync(srcDir)) {
-        return { copied, skipped, directoryCreated };
-    }
-    // Copy each skill directory
-    const skills = fs.readdirSync(srcDir, { withFileTypes: true });
-    for (const entry of skills) {
-        if (!entry.isDirectory())
-            continue;
-        const destSkillDir = path.join(skillsDir, entry.name);
-        const srcSkillDir = path.join(srcDir, entry.name);
-        if (skipExisting && fs.existsSync(destSkillDir)) {
-            skipped.push(entry.name);
+    const directoriesCreated = [];
+    for (const provider of SKILL_PROVIDERS) {
+        const relativeSkillsDir = `.${provider}/skills`;
+        const skillsDir = path.join(targetDir, relativeSkillsDir);
+        const srcDir = path.join(skeletonDir, relativeSkillsDir);
+        if (!fs.existsSync(skillsDir)) {
+            fs.mkdirSync(skillsDir, { recursive: true });
+            directoriesCreated.push(`${relativeSkillsDir}/`);
+        }
+        // Older/corrupt skeletons may not provide every configured provider.
+        if (!fs.existsSync(srcDir))
             continue;
+        for (const entry of fs.readdirSync(srcDir, { withFileTypes: true })) {
+            if (!entry.isDirectory())
+                continue;
+            const destSkillDir = path.join(skillsDir, entry.name);
+            const relativeSkillDir = `${relativeSkillsDir}/${entry.name}/`;
+            if (skipExisting && fs.existsSync(destSkillDir)) {
+                skipped.push(relativeSkillDir);
+                continue;
+            }
+            copyDirRecursive(path.join(srcDir, entry.name), destSkillDir);
+            copied.push(relativeSkillDir);
         }
-        copyDirRecursive(srcSkillDir, destSkillDir);
-        copied.push(entry.name);
     }
-    return { copied, skipped, directoryCreated };
+    return { copied, skipped, directoriesCreated };
 }
 /**
  * Copy roles directory from skeleton to codev/roles/.

package/dist/lib/scaffold.js.map

@@ -1 +1 @@
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package/dist/terminal/pty-manager.d.ts

@@ -67,6 +67,13 @@ export declare class TerminalManager {
     }>;
     /** Get a session by ID. */
     getSession(id: string): PtySession | undefined;
+    /**
+     * Find the session backed by the given SessionManager session id (#1198).
+     * Adopted sessions are keyed by terminal id in both maps, so the direct
+     * lookup hits; freshly created sessions use a separate shellper UUID, which
+     * PtySession records at attach time.
+     */
+    findByShellperSessionId(shellperSessionId: string): PtySession | undefined;
     /** Kill and remove a session. */
     killSession(id: string): boolean;
     /** Resize a session. */

package/dist/terminal/pty-manager.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"pty-manager.d.ts","sourceRoot":"","sources":["../../src/terminal/pty-manager.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,IAAI,MAAM,WAAW,CAAC;AAI7B,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAC9C,OAAO,KAAK,EAAoB,cAAc,EAAE,MAAM,kBAAkB,CAAC;AAIzE,MAAM,WAAW,qBAAqB;IACpC,aAAa,EAAE,MAAM,CAAC;IACtB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,cAAc,CAAC,EAAE,OAAO,CAAC;IACzB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,kBAAkB,CAAC,EAAE,MAAM,CAAC;CAC7B;AAED,MAAM,WAAW,qBAAqB;IACpC,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,IAAI,CAAC,EAAE,MAAM,EAAE,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,GAAG,CAAC,EAAE,MAAM,CAAC;IACb,GAAG,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IAC7B,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAQD,qBAAa,eAAe;IAC1B,OAAO,CAAC,QAAQ,CAAsC;IACtD,OAAO,CAAC,GAAG,CAAgC;IAC3C,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAkC;gBAE7C,MAAM,EAAE,qBAAqB;IAYzC,gCAAgC;IAC1B,aAAa,CAAC,GAAG,EAAE,qBAAqB,GAAG,OAAO,CAAC,cAAc,CAAC;IAuDxE;;;;;;;;;;;;;;;OAeG;IACH,gBAAgB,CAAC,IAAI,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,GAAG,EAAE,MAAM,CAAC;QAAC,EAAE,CAAC,EAAE,MAAM,CAAA;KAAE,GAAG,cAAc;IA8CnF,yBAAyB;IACzB,YAAY,IAAI,cAAc,EAAE;IAIhC;;;;;OAKG;IACH,eAAe,IAAI,KAAK,CAAC;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,YAAY,EAAE,MAAM,CAAC;QAAC,OAAO,EAAE,MAAM,CAAA;KAAE,CAAC;IAS9F,2BAA2B;IAC3B,UAAU,CAAC,EAAE,EAAE,MAAM,GAAG,UAAU,GAAG,SAAS;IAI9C;;;;;OAKG;IACH,uBAAuB,CAAC,iBAAiB,EAAE,MAAM,GAAG,UAAU,GAAG,SAAS;IAS1E,iCAAiC;IACjC,WAAW,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO;IAQhC,wBAAwB;IACxB,aAAa,CAAC,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,cAAc,GAAG,IAAI;IAO5E,yCAAyC;IACzC,SAAS,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,MAAM,GAAG;QAAE,KAAK,EAAE,MAAM,EAAE,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,OAAO,EAAE,OAAO,CAAA;KAAE,GAAG,IAAI;IAcnH,yEAAyE;IACzE,eAAe,CAAC,MAAM,EAAE,IAAI,CAAC,MAAM,GAAG,IAAI;IA2B1C,OAAO,CAAC,wBAAwB;IAuDhC,OAAO,CAAC,oBAAoB;IAsB5B,yDAAyD;IACzD,aAAa,CAAC,GAAG,EAAE,IAAI,CAAC,eAAe,EAAE,GAAG,EAAE,IAAI,CAAC,cAAc,GAAG,OAAO;YAqE7D,oBAAoB;YAkBpB,YAAY;IAkB1B,OAAO,CAAC,QAAQ;IAKhB,OAAO,CAAC,SAAS;IAIjB,sCAAsC;IACtC,QAAQ,IAAI,IAAI;CAgBjB"}

package/dist/terminal/pty-manager.js

@@ -149,6 +149,22 @@ export class TerminalManager {
     getSession(id) {
         return this.sessions.get(id);
     }
+    /**
+     * Find the session backed by the given SessionManager session id (#1198).
+     * Adopted sessions are keyed by terminal id in both maps, so the direct
+     * lookup hits; freshly created sessions use a separate shellper UUID, which
+     * PtySession records at attach time.
+     */
+    findByShellperSessionId(shellperSessionId) {
+        const byId = this.sessions.get(shellperSessionId);
+        if (byId)
+            return byId;
+        for (const session of this.sessions.values()) {
+            if (session.shellperSessionId === shellperSessionId)
+                return session;
+        }
+        return undefined;
+    }
     /** Kill and remove a session. */
     killSession(id) {
         const session = this.sessions.get(id);

package/dist/terminal/pty-manager.js.map

@@ -1 +1 @@
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package/dist/terminal/pty-session.d.ts

@@ -31,6 +31,13 @@ export interface PtySessionInfo {
     exitCode?: number;
     persistent?: boolean;
 }
+/**
+ * #1198: how long an unexpected shellper disconnect may remain unresolved
+ * before the session is torn down. Sized above SessionManager's full
+ * in-place-reconnect budget (3 rounds of backoff plus connect time) so a
+ * successful recovery always lands before the teardown fires.
+ */
+export declare const SHELLPER_CLOSE_GRACE_MS = 15000;
 export declare class PtySession extends EventEmitter {
     private readonly config;
     readonly id: string;
@@ -44,6 +51,7 @@ export declare class PtySession extends EventEmitter {
     private _restartOnExit;
     private _restartCleanupTimeout;
     private _restartCancelFn;
+    private _closeGraceTimer;
     private shellperPid;
     private cols;
     private rows;
@@ -88,10 +96,23 @@ export declare class PtySession extends EventEmitter {
     private cleanupShellper;
     private onPtyData;
     private rotateDiskLog;
-    /** Write user input to the PTY or shellper. */
-    write(data: string): void;
-    /** Resize the PTY or shellper. */
-    resize(cols: number, rows: number): void;
+    /**
+     * Whether input can actually reach the underlying process right now.
+     * For shellper-backed sessions this checks the live socket connection, not
+     * just the session status: a session whose shellper connection died reports
+     * status 'running' until teardown, and writes to it are dropped (#1198).
+     */
+    get writable(): boolean;
+    /**
+     * Write user input to the PTY or shellper.
+     * Returns false when the input was dropped (#1198).
+     */
+    write(data: string): boolean;
+    /**
+     * Resize the PTY or shellper.
+     * Returns false when the resize was dropped (#1198).
+     */
+    resize(cols: number, rows: number): boolean;
     /** Kill the PTY process or send signal to shellper. */
     kill(): void;
     /** Attach a WebSocket client. Returns ring buffer contents for replay. */

package/dist/terminal/pty-session.d.ts.map

@@ -1 +1 @@
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