@cleocode/worktree 2026.6.14 → 2026.6.17

package/dist/worktree-prune.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"worktree-prune.d.ts","sourceRoot":"","sources":["../src/worktree-prune.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AAKH,OAAO,KAAK,EAAE,qBAAqB,EAAE,oBAAoB,EAAE,MAAM,qBAAqB,CAAC;AAEvF,OAAO,EAEL,cAAc,IAAI,SAAS,EAE5B,MAAM,mBAAmB,CAAC;AAI3B;;;;;;;;;;;;;;;;;;;GAmBG;AACH,wBAAgB,cAAc,CAAC,OAAO,EAAE,qBAAqB,GAAG,oBAAoB,CA4DnF;AAmZD;;;;;;;;;;;;;;;;;;;GAmBG;AACH,wBAAgB,sBAAsB,CACpC,OAAO,EAAE,MAAM,EACf,iBAAiB,EAAE,MAAM,GACxB,UAAU,CAAC,OAAO,SAAS,CAAC,GAAG,IAAI,CAMrC"}

package/dist/worktree-prune.js

@@ -24,7 +24,7 @@
  * @task T10204
  */
 import { execFileSync } from 'node:child_process';
-import { existsSync, readdirSync } from 'node:fs';
+import { appendFileSync, existsSync, mkdirSync, readdirSync } from 'node:fs';
 import { join } from 'node:path';
 import { getGitRoot, gitSilent } from './git.js';
 import { destroyWorktree as napiDestroyWorktree, pruneWorktrees as napiPrune, removeDir as napiRemoveDir, } from './napi-binding.js';
@@ -56,18 +56,57 @@ export function pruneWorktrees(options) {
     const worktreeRoot = resolveWorktreeRootForHash(projectHash);
     const gitRoot = resolveGitRootOrFallback(projectRoot);
     const removed = [];
+    const quarantined = [];
     const errors = [];
     const gitPruneRan = gitPrune ? runGitPruneAdminCleanup(gitRoot) : false;
     if ((preserveTaskIds === undefined && idleDays === undefined) || !existsSync(worktreeRoot)) {
-        return { removed: 0, removedPaths: [], errors, gitPruneRan };
+        return {
+            removed: 0,
+            removedPaths: [],
+            quarantined: 0,
+            quarantinedPaths: [],
+            errors,
+            gitPruneRan,
+        };
     }
-    for (const entry of safeReaddir(worktreeRoot)) {
+    const entries = safeReaddir(worktreeRoot);
+    // T11996 Amendment 2 — fail-closed: if the preserve set is empty AND
+    // worktree directories exist, skip pruning entirely to prevent mass-deletion
+    // (e.g. fresh/post-exodus DB). Write a structured audit warning.
+    if (preserveTaskIds !== undefined && preserveTaskIds.size === 0 && entries.length > 0) {
+        const existingDirs = entries.filter((e) => existsSync(join(worktreeRoot, e)));
+        if (existingDirs.length > 0) {
+            appendWorktreeAuditLog(projectRoot, {
+                action: 'prune-skip',
+                xdgPath: worktreeRoot,
+                reason: 'preserve set empty while worktrees exist — skipping to prevent mass-deletion (T11996 fail-closed)',
+                success: false,
+            });
+            return {
+                removed: 0,
+                removedPaths: [],
+                quarantined: 0,
+                quarantinedPaths: [],
+                errors,
+                gitPruneRan,
+                skippedFailClosed: true,
+            };
+        }
+    }
+    for (const entry of entries) {
         const decision = classifyPruneCandidate(entry, preserveTaskIds, idleDays, worktreeRoot);
         if (decision === null)
             continue;
-        pruneSingleEntry(decision, gitRoot, projectRoot, removed, errors);
+        pruneSingleEntry(decision, gitRoot, projectRoot, removed, quarantined, errors);
     }
-    return { removed: removed.length, removedPaths: removed, errors, gitPruneRan };
+    return {
+        removed: removed.length,
+        removedPaths: removed,
+        quarantined: quarantined.length,
+        quarantinedPaths: quarantined,
+        errors,
+        gitPruneRan,
+    };
 }
 /**
  * Resolve the git root for `projectRoot`, falling back to `projectRoot` when
@@ -115,18 +154,28 @@ function safeReaddir(dir) {
  * `preserveTaskIds`/`idleDays` business logic that lives outside the
  * worktrunk-core SDK by design (ADR-061).
  *
+ * T11996 Amendment 1 (PREDICATE BLOCKER): if `preserveTaskIds` is provided and
+ * the entry IS in the set, it is ALWAYS preserved — idle age NEVER overrides
+ * the preserve list. Only entries NOT in the preserve set are eligible for
+ * idle-age pruning when `idleDays` is set.
+ *
  * @internal
  */
 function classifyPruneCandidate(entry, preserveTaskIds, idleDays, worktreeRoot) {
     const path = join(worktreeRoot, entry);
     if (preserveTaskIds !== undefined) {
-        if (!preserveTaskIds.has(entry)) {
-            return { taskId: entry, path, reason: 'orphan' };
+        // T11996: entries in the preserve set are NEVER eligible for pruning,
+        // regardless of idle age. Idle-age is only applied to orphan entries
+        // (entries not in the preserve set).
+        if (preserveTaskIds.has(entry)) {
+            return null;
         }
-        if (idleDays !== undefined && isWorktreeIdle(path, idleDays)) {
-            return { taskId: entry, path, reason: `idle-${idleDays}d` };
+        // Entry is not in the preserve set — it is an orphan.
+        // Check idle age only when idleDays is specified; otherwise remove immediately.
+        if (idleDays !== undefined && !isWorktreeIdle(path, idleDays)) {
+            return null; // orphan but not yet idle — wait longer
         }
-        return null;
+        return { taskId: entry, path, reason: idleDays !== undefined ? `idle-${idleDays}d` : 'orphan' };
     }
     if (idleDays !== undefined && isWorktreeIdle(path, idleDays)) {
         return { taskId: entry, path, reason: `idle-${idleDays}d` };
@@ -134,17 +183,196 @@ function classifyPruneCandidate(entry, preserveTaskIds, idleDays, worktreeRoot)
     return null;
 }
 /**
- * Remove a single worktree entry: unlock via git, remove via napi-backed
- * directory removal, then write audit + sentinel-index entries.
+ * Check whether a worktree has uncommitted changes (dirty state).
+ *
+ * Runs `git status --porcelain -uall` inside the worktree. `-uall` expands
+ * untracked directories so no file (including .env, local artifacts, etc.) is
+ * missed. Returns `false` when git is unavailable so we never block cleanup
+ * on a git error.
+ *
+ * @param worktreePath - Absolute path to the worktree directory.
+ * @returns `true` when uncommitted changes are present; `false` otherwise.
+ *
+ * @task T11996
+ * @internal
+ */
+function isWorktreeDirty(worktreePath) {
+    try {
+        const out = execFileSync('git', ['-C', worktreePath, 'status', '--porcelain', '-uall'], {
+            encoding: 'utf-8',
+            stdio: ['pipe', 'pipe', 'pipe'],
+            timeout: 10_000,
+        });
+        return out.trim().length > 0;
+    }
+    catch {
+        return false;
+    }
+}
+/**
+ * Check whether a worktree has commits not pushed to any remote ref.
+ *
+ * Two cases (T11996 Amendment 3):
+ * (a) Branch with a configured upstream: commits ahead of `@{upstream}`.
+ * (b) Branch with no upstream (never pushed): commits not reachable from any
+ *     remote-tracking ref.
+ * (c) Detached HEAD: commits not reachable from any remote-tracking ref.
+ *
+ * Returns `false` when git is unavailable or the worktree has no commits.
+ *
+ * @param worktreePath - Absolute path to the worktree directory.
+ * @returns `true` when unpushed commits exist; `false` otherwise.
+ *
+ * @task T11996
+ * @internal
+ */
+function hasUnpushedCommits(worktreePath) {
+    // Case (a): branch has a tracking upstream — check ahead count.
+    try {
+        const aheadStr = execFileSync('git', ['-C', worktreePath, 'rev-list', '--count', '@{upstream}..HEAD'], {
+            encoding: 'utf-8',
+            stdio: ['pipe', 'pipe', 'pipe'],
+            timeout: 10_000,
+        }).trim();
+        const aheadCount = Number.parseInt(aheadStr, 10);
+        if (!Number.isNaN(aheadCount) && aheadCount > 0)
+            return true;
+        // Upstream exists and ahead count is 0 — no unpushed commits.
+        return false;
+    }
+    catch {
+        // No upstream configured — fall through to case (b)/(c).
+    }
+    // Case (b)/(c): no upstream configured — check whether HEAD is reachable
+    // from the union of all remote-tracking refs.
+    try {
+        const remoteRefsOut = execFileSync('git', ['-C', worktreePath, 'for-each-ref', '--format=%(refname)', 'refs/remotes/'], {
+            encoding: 'utf-8',
+            stdio: ['pipe', 'pipe', 'pipe'],
+            timeout: 10_000,
+        }).trim();
+        const remoteRefs = remoteRefsOut.split('\n').filter(Boolean);
+        if (remoteRefs.length === 0) {
+            // No remotes configured — any local commit is "unpushed".
+            try {
+                const headOut = execFileSync('git', ['-C', worktreePath, 'rev-parse', 'HEAD'], {
+                    encoding: 'utf-8',
+                    stdio: ['pipe', 'pipe', 'pipe'],
+                    timeout: 5_000,
+                }).trim();
+                return headOut.length > 0;
+            }
+            catch {
+                return false;
+            }
+        }
+        // Count commits reachable from HEAD but not from any remote ref.
+        const args = ['-C', worktreePath, 'rev-list', '--count', 'HEAD', '--not', ...remoteRefs];
+        const countOut = execFileSync('git', args, {
+            encoding: 'utf-8',
+            stdio: ['pipe', 'pipe', 'pipe'],
+            timeout: 15_000,
+        }).trim();
+        const count = Number.parseInt(countOut, 10);
+        return !Number.isNaN(count) && count > 0;
+    }
+    catch {
+        return false;
+    }
+}
+/**
+ * Quarantine a dirty/unpushed worktree by packing it into a `.tar.gz` archive
+ * in `<projectRoot>/.cleo/quarantine/worktrees/`. The original directory is
+ * LEFT INTACT (never deleted). An audit JSONL entry is written.
+ *
+ * The archive is created with `tar -czf ... -C <parent> <taskId>` so the
+ * archive root is `<taskId>/`. `--dereference` captures symlink targets.
+ * No exclusions are applied — the archive captures ALL files including
+ * `.env`, ignored artifacts, etc. (T11996 AC: untracked + ignored files).
+ *
+ * @returns Absolute path to the created archive, or `null` on failure.
+ *
+ * @task T11996
+ * @internal
+ */
+function quarantineWorktreeDir(worktreePath, taskId, projectRoot, reason) {
+    try {
+        const quarantineDir = join(projectRoot, '.cleo', 'quarantine', 'worktrees');
+        mkdirSync(quarantineDir, { recursive: true });
+        const ts = new Date().toISOString().replace(/[:.]/g, '-');
+        const archiveName = `${taskId}-${ts}.tar.gz`;
+        const archivePath = join(quarantineDir, archiveName);
+        // Capture untracked AND ignored files by not excluding anything.
+        execFileSync('tar', ['-czf', archivePath, '--dereference', '-C', join(worktreePath, '..'), taskId], {
+            stdio: ['pipe', 'pipe', 'pipe'],
+            timeout: 120_000,
+        });
+        // Write audit entry — ZERO desktop output (T11996 Amendment 6).
+        const auditPath = join(quarantineDir, 'audit.jsonl');
+        const entry = JSON.stringify({
+            ts: new Date().toISOString(),
+            action: 'quarantine',
+            worktreePath,
+            taskId,
+            archivePath,
+            reason,
+            agentId: process.env['CLEO_AGENT_ID'] ?? 'cleo',
+        });
+        appendFileSync(auditPath, `${entry}\n`, { encoding: 'utf-8' });
+        return archivePath;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Remove a single worktree entry: check dirty/unpushed state first, then
+ * either quarantine (if unsafe) or unlock+remove via napi-backed directory
+ * removal, then write audit + sentinel-index entries.
+ *
+ * T11996: dirty or unpushed worktrees are QUARANTINED (tar archive in
+ * `<projectRoot>/.cleo/quarantine/worktrees/`), never deleted. The original
+ * directory is left on disk after quarantine.
  *
- * Mutates `removed` and `errors` in place to keep the orchestrator function
- * thin. Both audit-log and sentinel-index updates are best-effort and never
- * block successful removal.
+ * Mutates `removed`, `quarantined`, and `errors` in place.
  *
  * @internal
  */
-function pruneSingleEntry(decision, gitRoot, projectRoot, removed, errors) {
+function pruneSingleEntry(decision, gitRoot, projectRoot, removed, quarantined, errors) {
     const { taskId, path, reason } = decision;
+    // T11996: Dirty/unpushed guard — quarantine instead of deleting.
+    const dirty = isWorktreeDirty(path);
+    const unpushed = dirty ? false : hasUnpushedCommits(path);
+    const shouldQuarantine = dirty || unpushed;
+    const quarantineReason = dirty ? 'dirty' : 'unpushed';
+    if (shouldQuarantine) {
+        const archivePath = quarantineWorktreeDir(path, taskId, projectRoot, quarantineReason);
+        if (archivePath !== null) {
+            quarantined.push(path);
+            appendWorktreeAuditLog(projectRoot, {
+                action: 'quarantine',
+                xdgPath: path,
+                taskId,
+                reason: `${reason}+${quarantineReason}`,
+                success: true,
+            });
+        }
+        else {
+            errors.push({
+                path,
+                reason: `quarantine tar failed — worktree preserved (T11996, was ${quarantineReason})`,
+            });
+            appendWorktreeAuditLog(projectRoot, {
+                action: 'quarantine',
+                xdgPath: path,
+                taskId,
+                reason: `${reason}+${quarantineReason}`,
+                success: false,
+                error: 'tar archive creation failed',
+            });
+        }
+        return;
+    }
     // T11123: Use NAPI destroyWorktree (Rust worktrunk-core) instead of raw
     // git worktree unlock + remove shell-outs. The NAPI binding handles
     // unlock + force-remove atomically in Rust.

package/dist/worktree-prune.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cleocode/worktree",
-  "version": "2026.6.14",
+  "version": "2026.6.17",
   "private": false,
   "type": "module",
   "description": "Native CLEO worktree backend SDK",
@@ -25,14 +25,14 @@
   "author": "CLEO Code <hello@cleocode.dev>",
   "license": "MIT",
   "dependencies": {
-    "@cleocode/paths": "2026.6.14",
-    "@cleocode/contracts": "2026.6.14"
+    "@cleocode/contracts": "2026.6.17",
+    "@cleocode/paths": "2026.6.17"
   },
   "devDependencies": {
     "@types/node": "^24.3.0",
     "typescript": "^6.0.2",
     "vitest": "^4.1.4",
-    "@cleocode/core": "2026.6.14"
+    "@cleocode/core": "2026.6.17"
   },
   "repository": {
     "type": "git",