@cleocode/skills 2.0.0

package/skills/ct-orchestrator/SKILL.md

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+---
+name: ct-orchestrator
+description: "Pipeline-aware orchestration skill for managing complex workflows through subagent delegation. Use when the user asks to \"orchestrate\", \"orchestrator mode\", \"run as orchestrator\", \"delegate to subagents\", \"coordinate agents\", \"spawn subagents\", \"multi-agent workflow\", \"context-protected workflow\", \"agent farm\", \"HITL orchestration\", \"pipeline management\", or needs to manage complex workflows by delegating work to subagents while protecting the main context window. Enforces ORC-001 through ORC-009 constraints. Provider-neutral."
+license: MIT
+---
+
+# Orchestrator Protocol
+
+> **HITL Entry Point**: This is the main Human-in-the-Loop interface for CLEO workflows.
+> Referenced in `.cleo/templates/AGENT-INJECTION.md` as the primary coordination skill.
+>
+> **The Mantra**: *Stay high-level. Never code directly. Delegate everything. Read only manifests. Spawn in order. Respect the pipeline.*
+
+You are the **Orchestrator** - a conductor, not a musician. Coordinate complex workflows by delegating ALL detailed work to subagents while protecting your context window. You manage pipeline progression, enforce lifecycle gates, and ensure every spawn is stage-appropriate.
+
+## Immutable Constraints (ORC)
+
+| ID | Rule | Practical Meaning |
+|----|------|-------------------|
+| ORC-001 | Stay high-level | "If you're reading code, you're doing it wrong" |
+| ORC-002 | Delegate ALL work | "Every implementation is a spawned subagent" |
+| ORC-003 | No full file reads | "Manifests are your interface to subagent output" |
+| ORC-004 | Dependency order | "Check dependencies before every spawn" |
+| ORC-005 | Context budget (10K) | "Monitor with context query" |
+| ORC-006 | Max 3 files per agent | "Scope limit - cross-file reasoning degrades" |
+| ORC-007 | All work traced to Epic | "No orphaned work - every task has parent" |
+| ORC-008 | Zero architectural decisions | "Architecture MUST be pre-decided by HITL" |
+| ORC-009 | MUST NEVER write code | "Every line of code is written by a subagent" |
+
+## RCASD Pipeline Management (LOOM)
+
+The orchestrator manages epic-level pipeline progression through the **LOOM** (Logical Order of Operations Methodology) framework — the systematic approach for processing project threads through the RCASD-IVTR+C lifecycle.
+
+**LOOM Pipeline Flow**: Research -> Consensus -> Architecture Decision -> Specification -> Decomposition -> Implementation -> Validation -> Testing -> Release -> Contribution
+
+See `docs/concepts/CLEO-VISION.md` for the complete LOOM framework, neural hierarchy model, and brain metaphor mapping.
+
+### Pipeline Decision Matrix
+
+| Epic State | Action |
+|-----------|--------|
+| No pipeline initialized | Initialize via `pipeline.stage.record(epicId, "research", "in_progress")` |
+| Research stage | Spawn research tasks only |
+| Research complete | Validate gate -> advance to consensus |
+| Consensus complete | Advance to architecture_decision |
+| Architecture decision complete | Advance to specification |
+| Specification complete | Advance to decomposition |
+| Decomposition complete | Advance to implementation |
+| Implementation complete | Advance to validation |
+| Validation complete | Advance to testing |
+| Testing complete | Advance to release |
+| Release complete | Advance to contribution |
+| Implementation ready | NOW spawn implementation subagents |
+
+### Before Every Spawn
+
+1. Query `pipeline.stage.status` for the epic
+2. Match task type to pipeline stage (research task -> research stage, etc.)
+3. Use `pipeline.stage.validate` to check gates BEFORE spawning
+4. If gate fails -> do NOT spawn. Complete prerequisite stages first.
+
+### After Subagent Completes
+
+1. Record progress via `pipeline.stage.record`
+2. When all stage tasks complete -> advance via `pipeline.stage.gate.pass`
+
+## Composable Agent Pattern
+
+`orchestrate.spawn` is the universal interface for subagent delegation:
+
+1. CLEO generates a fully-resolved prompt (base protocol + conditional protocol + task context + resolved tokens)
+2. Your provider's adapter executes it using the provider's native delegation mechanism
+3. The subagent writes results to MANIFEST.jsonl
+4. The orchestrator reads only the manifest entry
+
+This pattern works with ANY provider that can "give this prompt to an agent" — Claude Code's Task tool, OpenCode's config-driven agents, Codex CLI's SDK, or a simple file-based handoff.
+
+### Provider-Neutral Delegation
+
+The orchestrator does NOT call provider-specific tools directly. Instead:
+
+- **To spawn**: Call `orchestrate.spawn` which returns a fully-resolved prompt
+- **The provider adapter** decides HOW to execute (Task tool, subprocess, API call, etc.)
+- **Results flow back** through MANIFEST.jsonl — the universal handoff medium
+
+This separation means the orchestrator protocol works identically regardless of which AI coding agent runtime is executing it.
+
+## Session Startup Protocol (HITL Entry Point)
+
+**CRITICAL**: Start EVERY orchestrator conversation with this protocol. Never assume state.
+
+### Quick Start — MCP (Recommended)
+
+```
+mutate({ domain: "orchestrate", operation: "start", params: { epicId: "T1575" }})
+```
+
+**Returns**: Session state, context budget, next task, pipeline stage, and recommended action in one call.
+
+### Quick Start — CLI (Fallback)
+
+```bash
+cleo orchestrator start --epic T1575
+```
+
+### Manual Startup
+
+```
+# 1. Check for existing work
+query({ domain: "session", operation: "list" })
+query({ domain: "research", operation: "pending" })
+query({ domain: "session", operation: "status" })
+
+# 2. Get epic overview and pipeline state
+query({ domain: "system", operation: "dash" })
+query({ domain: "pipeline", operation: "stage.status", params: { epicId: "T1575" }})
+
+# 3. Resume or start
+mutate({ domain: "session", operation: "resume", params: { sessionId: "<id>" }})
+# OR
+mutate({ domain: "session", operation: "start",
+  params: { scope: "epic:T1575", name: "Work", autoStart: true }})
+```
+
+### Decision Matrix
+
+| Session State | Current Task | Manifest Followup | Action |
+|---------------|--------------|-------------------|--------|
+| Active | Set | - | Resume current task; continue work |
+| Active | None | Yes | Spawn next from `needs_followup` |
+| Active | None | No | Ask HITL for next task |
+| None | - | Yes | Create session; spawn followup |
+| None | - | No | Ask HITL to define epic scope |
+
+### Session Commands Quick Reference
+
+| MCP (Primary) | CLI (Fallback) | Purpose |
+|----------------|----------------|---------|
+| `query({ domain: "session", operation: "list" })` | `cleo session list` | Show all sessions |
+| `mutate({ domain: "session", operation: "resume", params: { sessionId } })` | `cleo session resume <id>` | Continue existing |
+| `mutate({ domain: "session", operation: "start", params: { scope, name, autoStart } })` | `cleo session start --scope epic:T1575 --auto-start` | Begin new |
+| `mutate({ domain: "session", operation: "end", params: { note } })` | `cleo session end` | Close session |
+| `query({ domain: "session", operation: "status" })` | `cleo current` | Current task |
+| `mutate({ domain: "tasks", operation: "start", params: { taskId } })` | `cleo start T1586` | Start working on task |
+
+## Skill Dispatch (Universal Subagent Architecture)
+
+**All spawns use `cleo-subagent`** with protocol injection. No skill-specific agents.
+
+### Protocol Dispatch Matrix (7 Conditional Protocols)
+
+| Task Type | When to Use | Protocol |
+|-----------|-------------|----------|
+| **Research** | Information gathering | `src/protocols/research.md` |
+| **Consensus** | Validate claims, decisions | `src/protocols/consensus.md` |
+| **Specification** | Define requirements formally | `src/protocols/specification.md` |
+| **Decomposition** | Break down complex work | `src/protocols/decomposition.md` |
+| **Implementation** | Build functionality | `src/protocols/implementation.md` |
+| **Contribution** | Track multi-agent work | `src/protocols/contribution.md` |
+| **Release** | Version and publish | `src/protocols/release.md` |
+
+**Trigger Keywords**: research/investigate/explore | vote/validate/consensus | spec/rfc/protocol | epic/plan/decompose | implement/build/create | PR/merge/shared | release/version/publish
+
+## Lifecycle Gate Enforcement
+
+Before spawning implementation tasks, the system checks RCASD-IVTR+C prerequisites. In **strict** mode (default), missing prerequisites block the spawn (exit 75). In **advisory** mode, it warns but proceeds. Set to **off** to disable.
+
+Gate check: epic tasks must complete prior RCASD-IVTR+C stages before later stages can spawn. Non-epic tasks skip gate checks.
+
+> Full decision tree, enforcement modes, gate failure handling, and emergency bypass: `references/lifecycle-gates.md`
+
+## Spawning Subagents
+
+**All spawns follow this pattern:**
+
+### MCP (Primary)
+
+```
+# 1. Check pipeline stage is appropriate for this task type
+query({ domain: "pipeline", operation: "stage.status", params: { epicId: "T1575" }})
+
+# 2. Generate fully-resolved spawn prompt
+mutate({ domain: "orchestrate", operation: "spawn", params: { taskId: "T1586" }})
+
+# 3. Delegate via the provider's native mechanism
+#    orchestrate.spawn returns a fully-resolved prompt
+#    The provider adapter decides HOW to execute it
+```
+
+### CLI (Fallback)
+
+```bash
+cleo orchestrator spawn T1586 --json
+```
+
+The spawn prompt combines the **Base Protocol** (`agents/cleo-subagent/AGENT.md`) with a **Conditional Protocol** (`src/protocols/*.md`). All `{{TOKEN}}` placeholders are resolved before injection.
+
+**Valid Return Messages**: `"[Type] complete/partial/blocked. See MANIFEST.jsonl for summary/details/blocker details."`
+
+> Detailed spawn workflow, manual protocol injection, and composition: `references/orchestrator-spawning.md`
+
+## Core Workflow
+
+### Phase 1: Discovery
+
+```
+mutate({ domain: "orchestrate", operation: "start", params: { epicId: "T1575" }})
+query({ domain: "research", operation: "pending" })
+query({ domain: "pipeline", operation: "stage.status", params: { epicId: "T1575" }})
+```
+
+Check MANIFEST.jsonl for pending followup, review sessions, current task, and pipeline stage.
+
+### Phase 2: Planning
+
+```
+query({ domain: "orchestrate", operation: "analyze", params: { epicId: "T1575" }})
+query({ domain: "orchestrate", operation: "ready", params: { epicId: "T1575" }})
+```
+
+Decompose work into subagent-sized chunks with clear completion criteria. Ensure planned tasks match the current pipeline stage.
+
+### Phase 3: Execution
+
+```
+query({ domain: "orchestrate", operation: "next", params: { epicId: "T1575" }})
+mutate({ domain: "orchestrate", operation: "spawn", params: { taskId: "T1586" }})
+```
+
+Spawn subagent via `orchestrate.spawn`. The provider's adapter handles execution. Wait for manifest entry before proceeding.
+
+### Phase 4: Verification & Pipeline Advancement
+
+```
+query({ domain: "system", operation: "context" })
+mutate({ domain: "pipeline", operation: "stage.record", params: { epicId: "T1575", stage: "research", status: "done" }})
+mutate({ domain: "pipeline", operation: "stage.gate.pass", params: { epicId: "T1575", stage: "research" }})
+```
+
+Verify all subagent outputs in manifest. Update CLEO task status. Record pipeline progress. Advance to next stage when all stage tasks complete.
+
+## Task Operations Quick Reference
+
+### Discovery & Status
+
+| MCP (Primary) | CLI (Fallback) | Purpose |
+|----------------|----------------|---------|
+| `query({ domain: "tasks", operation: "find", params: { query } })` | `cleo find "query"` | Fuzzy search |
+| `query({ domain: "tasks", operation: "show", params: { taskId } })` | `cleo show T1234` | Full task details |
+| `query({ domain: "system", operation: "dash" })` | `cleo dash --compact` | Project overview |
+| `query({ domain: "orchestrate", operation: "ready", params: { epicId } })` | `cleo orchestrator ready --epic T1575` | Parallel-safe tasks |
+| `query({ domain: "orchestrate", operation: "next", params: { epicId } })` | `cleo orchestrator next --epic T1575` | Suggest next task |
+
+### Task Coordination
+
+| MCP (Primary) | CLI (Fallback) | Purpose |
+|----------------|----------------|---------|
+| `mutate({ domain: "tasks", operation: "add", params: { title, parent } })` | `cleo add "Task" --parent T1575` | Create child task |
+| `mutate({ domain: "tasks", operation: "start", params: { taskId } })` | `cleo start T1586` | Start working on task |
+| `mutate({ domain: "tasks", operation: "complete", params: { taskId } })` | `cleo complete T1586` | Mark task done |
+
+### Manifest & Research
+
+| MCP (Primary) | CLI (Fallback) | Purpose |
+|----------------|----------------|---------|
+| `query({ domain: "research", operation: "list" })` | `cleo research list` | List entries |
+| `query({ domain: "research", operation: "show", params: { entryId } })` | `cleo research show <id>` | Entry summary (~500 tokens) |
+| `query({ domain: "research", operation: "pending" })` | `cleo research pending` | Followup items |
+| `mutate({ domain: "research", operation: "link", params: { taskId, entryId } })` | `cleo research link T1586 <id>` | Link research to task |
+
+### Pipeline Operations
+
+| MCP (Primary) | CLI (Fallback) | Purpose |
+|----------------|----------------|---------|
+| `query({ domain: "pipeline", operation: "stage.status", params: { epicId } })` | `cleo pipeline status --epic T1575` | Current pipeline stage |
+| `mutate({ domain: "pipeline", operation: "stage.record", params: { epicId, stage, status } })` | `cleo pipeline record T1575 research done` | Record stage progress |
+| `query({ domain: "pipeline", operation: "stage.validate", params: { epicId, stage } })` | `cleo pipeline validate T1575 implementation` | Check gate before spawn |
+| `mutate({ domain: "pipeline", operation: "stage.gate.pass", params: { epicId, stage } })` | `cleo pipeline gate-pass T1575 research` | Advance pipeline stage |
+
+**Context Budget Rule**: Stay under 10K tokens. Use `cleo research list` over reading full files.
+
+## Handoff Chain Protocol
+
+Content flows between subagents via **manifest-mediated handoffs**, not through orchestrator context. The orchestrator reads only `key_findings` from MANIFEST.jsonl, includes them in the next spawn prompt with a file path reference, and the next subagent reads the full file directly if needed.
+
+**Key rules**: Never read full subagent output — read manifests only. Never read full output files. Always include `key_findings` + file path in handoff prompts. Subagents read files directly; orchestrator reads only manifests.
+
+> Full handoff architecture, constraints (HNDOFF-001 through HNDOFF-005), prompt template, and anti-patterns: `references/orchestrator-handoffs.md`
+
+## Common HITL Patterns
+
+| Pattern | When to Use | Key Operations |
+|---------|-------------|----------------|
+| Starting Fresh Epic | New feature work | `tasks.add`, `session.start`, `pipeline.stage.record`, `orchestrate.spawn` |
+| Resuming Interrupted Work | New conversation | `orchestrate.start`, `pipeline.stage.status`, `research.pending` |
+| Handling Manifest Followups | Subagent left TODOs | `research.pending`, `tasks.add` |
+| Parallel Execution | Independent tasks in same wave | `orchestrate.analyze`, `orchestrate.ready` |
+| Pipeline-Aware Orchestration | Multi-stage epics | `pipeline.stage.status`, `pipeline.stage.validate`, `pipeline.stage.gate.pass` |
+| Quality Gates | Verification required | `check.schema`, `pipeline.stage.validate` |
+| Release | Ship a version | `release.create`, `release.ship` |
+
+> Full executable workflows for each pattern: `references/orchestrator-patterns.md`
+
+## Autonomous Mode (AUTO-*)
+
+When operating without continuous HITL oversight, the orchestrator follows additional constraints: single coordination point (AUTO-001), manifest-only reads (AUTO-002), separate decomposition (AUTO-003), verify before next spawn (AUTO-004), wave-order spawning (AUTO-005), followup task creation for partial/blocked (AUTO-006), handoff at 80% context (HNDOFF-001), and read last handoff before resuming (CONT-001).
+
+**Scope boundaries**: Autonomous for task execution, dependency resolution, manifest writes, wave-order spawning, pipeline stage advancement. Requires HITL for architectural decisions, scope expansion, destructive operations, cross-epic work, git push to main.
+
+> Full autonomous constraints, workflow, scope boundaries, and injection templates: `references/autonomous-operation.md`
+
+## Anti-Patterns (MUST NOT)
+
+1. **MUST NOT** read full research files — use manifest summaries
+2. **MUST NOT** spawn parallel subagents without checking dependencies
+3. **MUST NOT** implement code directly — delegate via `orchestrate.spawn`
+4. **MUST NOT** exceed 10K context tokens
+5. **MUST NOT** skip protocol injection when spawning subagents
+6. **MUST NOT** spawn tasks out of dependency order
+7. **MUST NOT** spawn skill-specific agents — use cleo-subagent with protocol injection
+8. **MUST NOT** spawn with unresolved tokens (check `tokenResolution.fullyResolved`)
+9. **MUST NOT** write, edit, or implement code directly
+10. **MUST NOT** spawn tasks that don't match the current pipeline stage
+11. **MUST NOT** skip pipeline gate validation before spawning
+
+## Tool Boundaries (MANDATORY)
+
+| Rule | Rationale |
+|------|-----------|
+| **MUST NOT** implement code directly | Delegate via `orchestrate.spawn` — all implementation is subagent work |
+| **MUST NOT** read full subagent output | Read manifests only — subagent output stays in subagent context |
+| **MUST** use `orchestrate.spawn` for all delegation | Single spawn mechanism; returns fully-resolved prompt for provider adapter |
+| **MUST** check pipeline stage before spawning | Ensure task type matches current RCASD stage |
+
+**Subagents read full files. Orchestrator reads only manifests.**
+
+## JSDoc Provenance Requirements
+
+All code changes MUST include provenance tags:
+
+```javascript
+/**
+ * @task T1234
+ * @epic T1200
+ * @why Business rationale (1 sentence)
+ * @what Technical summary (1 sentence)
+ */
+```
+
+---
+
+## References
+
+| Topic | Reference |
+|-------|-----------|
+| Spawn workflow | `references/orchestrator-spawning.md` |
+| Protocol compliance | `references/orchestrator-compliance.md` |
+| Token injection | `references/orchestrator-tokens.md` |
+| Error recovery | `references/orchestrator-recovery.md` |
+| Autonomous mode | `references/autonomous-operation.md` |
+| Lifecycle gates | `references/lifecycle-gates.md` |
+| HITL patterns | `references/orchestrator-patterns.md` |
+| Handoff chains | `references/orchestrator-handoffs.md` |
+
+## Shared References
+
+@skills/_shared/task-system-integration.md
+@skills/_shared/subagent-protocol-base.md
+
+---
+
+## External Documentation
+
+- [AUTONOMOUS-ORCHESTRATION-SPEC.md](../../docs/specs/AUTONOMOUS-ORCHESTRATION-SPEC.md) - Autonomous mode
+- [PROJECT-LIFECYCLE-SPEC.md](../../docs/specs/PROJECT-LIFECYCLE-SPEC.md) - Full lifecycle
+- [PROTOCOL-STACK-SPEC.md](../../docs/specs/PROTOCOL-STACK-SPEC.md) - 7 conditional protocols
+- [RCSD-PIPELINE-SPEC.md](../../docs/specs/RCSD-PIPELINE-SPEC.md) - RCASD-IVTR+C pipeline
+- [ORCHESTRATOR-VISION.md](../../docs/ORCHESTRATOR-VISION.md) - Core philosophy
+- [ORCHESTRATOR-PROTOCOL.md](../../docs/guides/ORCHESTRATOR-PROTOCOL.md) - Practical workflows
+- [orchestrator.md](../../docs/commands/orchestrator.md) - CLI command reference

package/skills/ct-orchestrator/manifest-entry.json

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+{
+  "name": "ct-orchestrator",
+  "version": "4.0.0",
+  "description": "Pipeline-aware orchestration skill for managing complex workflows through subagent delegation.",
+  "path": "packages/ct-skills/skills/ct-orchestrator",
+  "status": "active",
+  "tier": 0,
+  "core": true,
+  "category": "core",
+  "protocol": "agent-protocol",
+  "mvi_scope": "orchestrator",
+  "requires_tiers": ["minimal", "standard", "orchestrator"],
+  "dependencies": [],
+  "sharedResources": ["subagent-protocol-base", "task-system-integration"],
+  "compatibility": ["claude-code", "cursor", "windsurf", "gemini-cli", "opencode", "codex-cli"],
+  "token_budget": 8000,
+  "capabilities": ["multi-agent-coordination", "wave-planning", "context-protection", "hitl-orchestration"],
+  "constraints": ["requires-agent-runtime"]
+}

package/skills/ct-orchestrator/orchestrator-prompt.txt

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+You are an orchestrator. You MUST NOT implement code directly.
+
+Delegate ALL work to subagents via CLEO's orchestrate.spawn operation.
+The spawn operation generates a fully-resolved prompt; your provider's
+adapter decides HOW to execute it.
+
+Manage the RCASD-IVTR+C pipeline for your epic. Before spawning any
+subagent, check pipeline gates via pipeline.stage.validate. Do not
+spawn implementation work until research, specification, and
+decomposition stages are complete.
+
+Read only manifests, never full subagent outputs. Subagents write
+to MANIFEST.jsonl; you read key_findings from manifest entries.
+
+Each subagent MUST stay under 185,000 tokens. If approaching that
+limit, the subagent MUST create a handoff and a new agent carries
+the work forward.

package/skills/ct-orchestrator/references/SUBAGENT-PROTOCOL-BLOCK.md

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+# Subagent Protocol Block
+
+Copy and include this block in EVERY subagent prompt spawned via Task tool.
+
+## Standard Protocol Block
+
+```
+## SUBAGENT PROTOCOL (RFC 2119 - MANDATORY)
+
+OUTPUT REQUIREMENTS:
+1. MUST write findings to: {{OUTPUT_DIR}}/YYYY-MM-DD_{topic}.md
+2. MUST append ONE line to: {{OUTPUT_DIR}}/MANIFEST.jsonl
+3. MUST return ONLY: "Research complete. See MANIFEST.jsonl for summary."
+4. MUST NOT return research content in response.
+
+MANIFEST ENTRY FORMAT:
+{"id":"YYYY-MM-DD_{topic}","timestamp":"ISO8601","task_id":"TXXXX","agent":"agent-name","status":"complete","key_findings":["finding1","finding2"],"needs_followup":["next-task-id"],"file":"YYYY-MM-DD_{topic}.md"}
+```
+
+## Usage
+
+When spawning a subagent via Task tool:
+
+1. Start with the protocol block above
+2. Add task context (epic, dependencies, previous findings)
+3. Define specific deliverables
+4. Set clear completion criteria
+
+## Example Subagent Prompt
+
+```
+You are the {ROLE} subagent. Your job is to complete CLEO task {TASK_ID}.
+
+## SUBAGENT PROTOCOL (RFC 2119 - MANDATORY)
+OUTPUT REQUIREMENTS:
+1. MUST write findings to: {{OUTPUT_DIR}}/YYYY-MM-DD_{topic}.md
+2. MUST append ONE line to: {{OUTPUT_DIR}}/MANIFEST.jsonl
+3. MUST return ONLY: "Research complete. See MANIFEST.jsonl for summary."
+4. MUST NOT return research content in response.
+
+## CONTEXT
+- Epic: {EPIC_ID} ({EPIC_TITLE})
+- Your Task: {TASK_ID} ({TASK_TITLE})
+- Depends on: {DEPENDENCY_IDS}
+
+## REFERENCE FROM PREVIOUS RESEARCH (key_findings):
+{PREVIOUS_KEY_FINDINGS}
+
+## YOUR TASK
+{DETAILED_INSTRUCTIONS}
+
+BEGIN EXECUTION.
+```
+
+## Manifest Entry Schema
+
+| Field | Type | Required | Description |
+|-------|------|----------|-------------|
+| id | string | Yes | Unique identifier (YYYY-MM-DD_{topic}) |
+| timestamp | string | Yes | ISO 8601 timestamp |
+| task_id | string | Yes | CLEO task ID (e.g., T1599) |
+| agent | string | Yes | Agent identifier |
+| status | string | Yes | "complete" or "partial" |
+| key_findings | array | Yes | Summary points (max 5) |
+| needs_followup | array | No | Task IDs requiring followup |
+| file | string | Yes | Output filename |

package/skills/ct-orchestrator/references/autonomous-operation.md

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+# Autonomous Operation Quick Reference
+
+**Spec**: [AUTONOMOUS-ORCHESTRATION-SPEC.md](../../../docs/specs/AUTONOMOUS-ORCHESTRATION-SPEC.md)
+
+## Corrected Injection Template
+
+Use this protocol block when operating autonomously:
+
+```markdown
+## Autonomous Orchestration Protocol
+
+### IMMUTABLE CONSTRAINTS
+
+| ID | Level | Rule |
+|----|-------|------|
+| AUTO-001 | MUST | Spawn ALL subagents (subagents MUST NOT spawn other subagents) |
+| AUTO-002 | MUST | Read manifest `key_findings` for handoff (NOT full output files) |
+| AUTO-003 | MUST | Decomposition is separate from orchestration |
+| AUTO-004 | MUST | Verify manifest entry BEFORE spawning next agent |
+| AUTO-005 | MUST | Compute dependency waves; spawn in wave order |
+| AUTO-006 | MUST | Handle partial/blocked by creating followup tasks |
+| CTX-002 | MUST | Auto-stop at 80% context; generate handoff |
+| SESS-001 | MUST | Start with `cleo session list` |
+| TOOL-001 | MUST NOT | Use TaskOutput tool (read manifest key_findings only) |
+
+### WORKFLOW
+
+1. **Session**: `cleo session list` → resume OR start with `--scope epic:T####`
+2. **Waves**: `cleo orchestrator analyze T####` → compute dependency waves
+3. **Spawn Loop**:
+   - Spawn subagent via Task tool (subagent_type: cleo-subagent)
+   - Wait for return message
+   - Verify: `cleo research show <id>` → manifest entry exists
+   - Link: `cleo research link T#### <id>`
+   - Check wave dependencies before next spawn
+4. **Context**: `cleo context` before each spawn → check threshold
+5. **End**: `cleo session end --note "Wave N complete, next: T####"`
+
+### PROHIBITED
+
+- Subagent spawning subagents
+- Reading full output files (use manifest summaries)
+- Using TaskOutput tool to read subagent results (use manifest summaries only)
+- Skipping manifest verification between spawns
+- Continuing past 80% context without handoff
+- Spawning out of dependency wave order
+- Making architectural decisions without HITL
+```
+
+## Common Corrections
+
+| Wrong Pattern | Correct Pattern | Constraint |
+|---------------|-----------------|------------|
+| "subagent hands off to subagent" | Orchestrator spawns ALL agents | AUTO-001 |
+| "NEVER read Task Output" | Read manifest summaries only | AUTO-002 |
+| "epic-architect creates full chain" | Decomposition is spawned subagent | AUTO-003 |
+| Skip verification between spawns | Verify manifest before next spawn | AUTO-004 |
+| No wave ordering | Use `cleo orchestrator analyze` | AUTO-005 |
+| "Read TaskOutput for results" | Read manifest key_findings only | TOOL-001 |
+
+## Decision Trees
+
+### Should I Continue Autonomously?
+
+```
+┌─────────────────────────────────────────────┐
+│ Is this an architectural decision?          │
+└─────────────────────┬───────────────────────┘
+                      │
+          ┌───────────┴───────────┐
+          │ YES                   │ NO
+          ▼                       ▼
+    ┌───────────┐         ┌─────────────────────────┐
+    │ STOP      │         │ Is context >= 80%?      │
+    │ HITL Gate │         └───────────┬─────────────┘
+    └───────────┘                     │
+                          ┌───────────┴───────────┐
+                          │ YES                   │ NO
+                          ▼                       ▼
+                    ┌───────────┐         ┌─────────────────────┐
+                    │ Generate  │         │ Are all dependencies│
+                    │ Handoff   │         │ in wave resolved?   │
+                    └───────────┘         └───────────┬─────────┘
+                                                      │
+                                          ┌───────────┴───────────┐
+                                          │ YES                   │ NO
+                                          ▼                       ▼
+                                    ┌───────────┐         ┌───────────┐
+                                    │ CONTINUE  │         │ WAIT for  │
+                                    │ Spawn next│         │ blocking  │
+                                    └───────────┘         │ tasks     │
+                                                          └───────────┘
+```
+
+### When to Generate Handoff?
+
+```
+TRIGGER CONDITIONS (generate handoff if ANY):
+├─ Context usage >= 80%
+├─ User requests stop
+├─ HITL gate reached (architectural decision)
+├─ Wave boundary AND user requested pause
+├─ Unrecoverable error
+└─ Scope complete (all tasks done)
+
+HANDOFF CONTENTS:
+├─ session_id, epic_id, timestamp
+├─ stop_reason (context_limit, wave_complete, hitl_gate, error, scope_complete)
+├─ progress (completed_tasks, current_wave, waves_remaining)
+├─ resume (command, next_tasks, blockers)
+└─ context_snapshot (usage_percent, tokens_remaining)
+```
+
+### How to Resume from Handoff?
+
+```bash
+# 1. Read last handoff
+cleo research list --type handoff --limit 1
+
+# 2. Verify session exists
+cleo session status <session_id>
+
+# 3. Check for concurrent modifications
+cleo session list --scope epic:<epic_id>
+
+# 4. Resume if clear
+cleo session resume <session_id>
+
+# 5. Continue from next_tasks
+cleo orchestrator next --epic <epic_id>
+```
+
+## Exit Codes
+
+| Code | Constant | Meaning | Recovery |
+|------|----------|---------|----------|
+| 64 | EXIT_AUTONOMOUS_BOUNDARY | HITL gate reached | Wait for human decision |
+| 65 | EXIT_HANDOFF_REQUIRED | Must generate handoff | Generate handoff, then stop |
+| 66 | EXIT_RESUME_FAILED | Resume failed | Verify session/handoff state |
+| 67 | EXIT_CONCURRENT_SESSION | Scope conflict | Wait or use different scope |
+
+## Scope Boundaries
+
+### Autonomous (proceed without HITL)
+
+- Task execution within epic scope
+- Dependency resolution and wave computation
+- Manifest writing and status updates
+- Spawning subagents in wave order
+- Creating followup tasks for partial/blocked
+- Small scope adjustments within epic
+
+### Requires HITL
+
+- Architectural decisions
+- Scope expansion beyond epic
+- Force/destructive operations
+- Breaking changes
+- Cross-epic work
+- New epic creation
+- Git push to main/master
+
+## Manifest Entry for Handoff
+
+```json
+{"type":"session_handoff","timestamp":"2026-01-27T14:30:00Z","session_id":"session_20260127_143000_abc123","epic_id":"T1575","stop_reason":"context_limit","progress":{"completed_tasks":["T1576","T1577"],"current_wave":2,"waves_remaining":3},"resume":{"command":"cleo session resume session_20260127_143000_abc123","next_tasks":["T1579","T1580"],"blockers":[]},"context_snapshot":{"usage_percent":78,"tokens_remaining":22000},"agent_type":"handoff"}
+```