@cleocode/core 2026.9.23 → 2026.9.25

package/dist/project-scope.js

@@ -11,7 +11,7 @@ import { readFile } from 'node:fs/promises';
 import { homedir } from 'node:os';
 import { basename, dirname, join, resolve } from 'node:path';
 import { ExitCode } from '@cleocode/contracts';
-import { isAbsolutePath } from '@cleocode/paths';
+import { isAbsolutePath, isValidProjectDisplayName, readDeclaredProjectIdentity, readPortableProjectId, } from '@cleocode/paths';
 import { CleoError } from './errors.js';
 import { generateProjectHash } from './nexus/hash.js';
 import { isProjectMovedRefusalEnabled, projectMovedError, readValidProjectTombstone, } from './project-tombstone.js';
@@ -127,13 +127,45 @@ export function linkedWorktreeMainRoot(dir) {
     if (!gitdir || basename(dirname(gitdir)) !== 'worktrees')
         return null;
     const commonDir = dirname(dirname(gitdir));
-    if (basename(commonDir) === '.git')
-        return dirname(commonDir);
+    const checkout = checkoutOfCommonDir(commonDir);
+    if (checkout !== null)
+        return checkout;
     // A worktree of a submodule: the common dir is `<super>/.git/modules/<name>`,
     // a git-internal path. The checkout is its `core.worktree`; without one,
     // the main checkout is unknown.
     return readCoreWorktree(commonDir);
 }
+/**
+ * The checkout that owns a worktree common dir, from the layout alone.
+ *
+ * - `<main>/.git` → `<main>`.
+ * - The bare-worktree layout `/p/.bare` (optionally with a `/p/.git` gitlink
+ *   `gitdir: ./.bare`) → `/p`, the directory that layout dedicates to the
+ *   repository; T12708 keeps it resolving as it did.
+ * - A bare repository that a parent `.git` gitlink names → that parent.
+ * - Any other bare repository (e.g. `/p/app.git`) → `null`: its parent is
+ *   just the directory it happens to sit in.
+ *
+ * @param commonDir - Absolute git common directory.
+ * @returns The owning checkout, or `null`.
+ */
+function checkoutOfCommonDir(commonDir) {
+    if (basename(commonDir) === '.git' || basename(commonDir) === '.bare') {
+        return dirname(commonDir);
+    }
+    const parent = dirname(commonDir);
+    const target = readGitlinkTarget(parent);
+    if (!target)
+        return null;
+    if (resolve(target) === resolve(commonDir))
+        return parent;
+    try {
+        return realpathSync(target) === realpathSync(commonDir) ? parent : null;
+    }
+    catch {
+        return null;
+    }
+}
 /**
  * Name the project that owns the linked git worktree at `dir`, for refusals
  * that must say where the store actually lives (T12677).
@@ -143,7 +175,8 @@ export function linkedWorktreeMainRoot(dir) {
  *   `owning repository /home/u/project (not an initialised CLEO project)`, or
  *   `owning repository unknown (unreadable gitlink)`.
  * @remarks Never throws. Reads only the gitlink, the main checkout's gitdir
- *   config and its `.cleo/project-info.json`.
+ *   config and its declared identity (`.cleo/project.json`, the legacy
+ *   `.cleo/project-id`, then `.cleo/project-info.json`).
  * @example
  * ```ts
  * describeWorktreeOwner('/data/cleo/worktrees/abc/T1');
@@ -162,14 +195,10 @@ export function describeWorktreeOwner(dir) {
             : `owning repository ${bare} is a bare git repository with no main checkout to hold a CLEO store; ` +
                 'clone it to a regular checkout, run `cleo init` there, and create worktrees from that checkout';
     }
+    // T12716: the declared identity (tracked id first, then the cache).
     let projectId = null;
     try {
-        const parsed = JSON.parse(readFileSync(join(mainRoot, '.cleo', 'project-info.json'), 'utf-8'));
-        if (typeof parsed === 'object' && parsed !== null && 'projectId' in parsed) {
-            const value = parsed.projectId;
-            if (typeof value === 'string' && value !== '')
-                projectId = value;
-        }
+        projectId = readDeclaredProjectIdentity(mainRoot)?.projectId ?? null;
     }
     catch {
         // No readable identity: named below as not initialised.
@@ -307,8 +336,13 @@ export function _resolveMainRepoFromGitlink(gitlinkDir) {
         // superproject, so a submodule shared (and wrote) its parent's store.
         if (basename(dirname(gitdir)) !== 'worktrees')
             return null;
-        // gitdir is `<main>/.git/worktrees/<name>` → strip last 3 segments.
-        const mainRepo = dirname(dirname(dirname(gitdir)));
+        // T12708: the owning checkout comes from the common dir (see
+        // checkoutOfCommonDir). Stripping three segments named a bare repo's
+        // PARENT, so `/p/app.git` worktrees bound to `/p`'s store whenever `/p`
+        // was a CLEO project.
+        const mainRepo = checkoutOfCommonDir(dirname(dirname(gitdir)));
+        if (mainRepo === null)
+            return null;
         if (existsSync(join(mainRepo, '.cleo')) && validateProjectRoot(mainRepo)) {
             return mainRepo;
         }
@@ -331,6 +365,15 @@ export function _resolveMainRepoFromGitlink(gitlinkDir) {
  * the directory is a proper CLEO project rather than a stray `.cleo/` left by
  * an old installation or a git worktree that auto-created its own `.cleo/`.
  *
+ * ## Tracked identity (T12716)
+ *
+ * A candidate whose `.cleo/project.json` (or legacy `.cleo/project-id`)
+ * declares a valid id is also accepted, without the legacy warning — a fresh
+ * clone before `cleo init` is a project root. As in `resolveProjectByCwd`, a
+ * tracked-only `.cleo/` counts only at a git toplevel (a real `.git/`
+ * directory), so a committed id in a monorepo subdirectory never shadows its
+ * parent, and a worktree (gitlink `.git` file) still resolves to its parent.
+ *
  * ## Legacy fallback (backwards-compatibility)
  *
  * Projects initialized before `project-info.json` was introduced are still
@@ -410,6 +453,16 @@ export function validateProjectRoot(candidate) {
             // JSON parse error or read error — fall through to legacy check.
         }
     }
+    // T12716: a valid tracked identity marks a root at a git toplevel.
+    if (readPortableProjectId(candidate).status === 'valid') {
+        try {
+            if (statSync(join(candidate, '.git')).isDirectory())
+                return true;
+        }
+        catch {
+            // No `.git/`: not a toplevel — fall through (rejected below).
+        }
+    }
     // Legacy fallback: .cleo/ + .git/ sibling (no project-info.json required).
     // Emits a one-time warning to prompt the operator to run `cleo init`.
     //
@@ -641,6 +694,27 @@ export function getProjectRoot(cwd) {
         fix: 'cleo init',
     });
 }
+/**
+ * Whether an error only says "there is no CLEO project here": the cwd is
+ * outside every project (`Not inside a CLEO project`, `No CLEO project found`,
+ * `E_NO_PROJECT`, `NEXUS_PROJECT_NOT_FOUND`) or the project is uninitialised
+ * (`Run cleo init at …`). Project-independent commands (`decide`, `login`,
+ * `setup`) run there routinely, so startup checks treat it as expected, not
+ * as a failure.
+ *
+ * @param err - Any caught value.
+ * @returns True for a missing-project signal; false for any other error.
+ * @task T12733
+ */
+export function isMissingProjectError(err) {
+    if (err instanceof CleoError && err.code === ExitCode.NEXUS_PROJECT_NOT_FOUND)
+        return true;
+    const message = err instanceof Error ? err.message : typeof err === 'string' ? err : '';
+    return (message.includes('E_NO_PROJECT') ||
+        message.includes('No CLEO project found') ||
+        message.startsWith('Not inside a CLEO project') ||
+        message.startsWith('Run cleo init'));
+}
 /**
  * Module-level flag: emit the legacy-fallback warning at most once per process.
  * Prevents log spam when `validateProjectRoot` is called repeatedly in a session.
@@ -674,6 +748,65 @@ export function computeStableProjectHash(projectRoot) {
     };
     return generateProjectHash(real(resolveStoreOwnerRoot(real(projectRoot))));
 }
+/**
+ * Compute the id-derived `projectHash` for a project id (T12558 · T12716).
+ *
+ * Used ONLY for an identity minted on explicit request (`cleo init
+ * --new-identity`, T12558). Every other project, a fresh init included, gets
+ * {@link computeStableProjectHash}: a hash is only stable across the loss of
+ * the untracked project-info.json if it can be re-derived from disk, and only
+ * the path-derived value can (ADR-096, AC8). A stored hash is never
+ * re-derived. If a cross-clone hash is ever needed, it belongs in
+ * `.cleo/project.json` as a write-once field.
+ *
+ * @param projectId - The project's portable id.
+ * @returns 12-char hex hash of `project-id:<id>`.
+ * @example
+ * ```ts
+ * computePortableProjectHash('c78d09c3a8ee'); // same value on every device
+ * ```
+ * @task T12716
+ */
+export function computePortableProjectHash(projectId) {
+    return generateProjectHash(`project-id:${projectId}`);
+}
+/**
+ * The display name of a project (T12716) — the single accessor every
+ * registration, encounter, Nexus link and label path uses.
+ *
+ * Order: the committed `.cleo/project.json` `name`; for a legacy project not
+ * yet migrated by `cleo doctor project-identity --resolve`, the
+ * `.cleo/project-info.json` `displayName` (what a legacy rename writes), then
+ * its `name` (the init-time name, or what `cleo project rename` wrote before
+ * T12716), then the stray `projectName` old `cleo upgrade --name` builds
+ * wrote (T12712); otherwise the directory basename.
+ *
+ * @param projectRoot - Absolute project root.
+ * @returns A non-empty name. Never throws.
+ * @example
+ * ```ts
+ * getProjectDisplayName('/work/cleocode'); // 'cleocode' unless project.json names it
+ * ```
+ * @task T12716
+ */
+export function getProjectDisplayName(projectRoot) {
+    const tracked = readPortableProjectId(projectRoot);
+    if (tracked.status === 'valid' && tracked.name !== undefined)
+        return tracked.name;
+    try {
+        const info = JSON.parse(readFileSync(join(projectRoot, '.cleo', 'project-info.json'), 'utf-8'));
+        for (const field of ['displayName', 'name', 'projectName']) {
+            const name = info[field];
+            if (typeof name === 'string' && isValidProjectDisplayName(name))
+                return name;
+        }
+    }
+    catch {
+        // No readable cache: the basename below.
+    }
+    const segments = projectRoot.replace(/[\\/]+$/, '').split(/[\\/]/);
+    return segments[segments.length - 1] || 'unknown';
+}
 /**
  * Persist a derived `projectHash` into a legacy file, compare-and-swap style.
  *
@@ -715,12 +848,18 @@ function decodeProjectInfo(raw, projectRoot, infoPath) {
         projectHash = computeStableProjectHash(projectRoot);
         backfillProjectHash(infoPath, data.projectId, projectHash);
     }
-    const segments = projectRoot.replace(/[\\/]+$/, '').split(/[\\/]/);
+    // T12716: the tracked id wins over the cached `projectId` (the same order
+    // as `readDeclaredProjectIdentity` and `decideProjectIdentity`).
+    const tracked = readPortableProjectId(projectRoot);
     return {
         projectHash,
-        projectId: typeof data.projectId === 'string' ? data.projectId : '',
+        projectId: tracked.status === 'valid'
+            ? tracked.projectId
+            : typeof data.projectId === 'string'
+                ? data.projectId
+                : '',
         projectRoot,
-        projectName: segments[segments.length - 1] ?? 'unknown',
+        projectName: getProjectDisplayName(projectRoot),
     };
 }
 /**

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package/dist/release/ci-evidence.d.ts

@@ -22,6 +22,13 @@
  * Pending, failed, cancelled, skipped and missing required checks are each
  * refused with the check's name and state.
  *
+ * One substitution (T12742): when a required check's merge-commit push run
+ * was only CANCELLED or SKIPPED (a concurrency group superseded it) and no
+ * run on the merge commit failed, the first decisive green `push` run on a
+ * later default-branch commit stands in — only when the PR head's own
+ * `pull_request` run was green and nothing in between touched the PR's files
+ * or a CI definition. See {@link findGreenDescendant}.
+ *
  * @task T12634
  */
 import type { EvidenceAtom, EvidenceValidationContext } from '@cleocode/contracts';
@@ -78,7 +85,25 @@ export interface EvaluateMergeCommitChecksOptions {
     treeEquivalentSha?: string;
     /** Required-name → app/workflow pin; a run from anything else never counts. */
     pins?: Record<string, RequiredCheckPinSpec>;
+    /**
+     * Later default-branch commit (T12742) whose `push` runs stand in for a
+     * required check whose merge-commit verdict is only `cancelled`/`skipped` —
+     * never for a failed, pending or missing one. The caller proves ancestry and
+     * file integrity ({@link findGreenDescendant}).
+     */
+    descendantSha?: string;
 }
+/** One first-parent commit of the default branch after a merge commit (T12742). */
+export interface MainCommit {
+    /** Commit SHA. */
+    sha: string;
+    /** Number of parents; 2+ is a merge commit. */
+    parents: number;
+}
+/** Most later default-branch commits examined for a green stand-in run (T12742). */
+export declare const CI_DESCENDANT_MAX_CANDIDATES = 10;
+/** Latest committer time after the merge commit a stand-in may have (T12742): 7 days. */
+export declare const CI_DESCENDANT_MAX_AGE_SECONDS: number;
 /** A `ci:` atom resolution: the validated atom, or the refusal. */
 export type CiAtomResolution = {
     ok: true;
@@ -129,6 +154,20 @@ export interface ResolveCiEvidenceOptions {
     viewComponentPr?: ViewComponentPr;
     /** Persist nothing: no PR-result or branch-protection cache writes (the `--plan` preview). */
     readOnly?: boolean;
+    /**
+     * First-parent commits of `ref` after `mergeSha`, oldest first, already
+     * bounded to {@link CI_DESCENDANT_MAX_CANDIDATES} within
+     * {@link CI_DESCENDANT_MAX_AGE_SECONDS}; null when git cannot tell (T12742).
+     * Defaults to `git log --first-parent`.
+     */
+    listDescendants?: (mergeSha: string, ref: string, cwd: string) => string[] | null;
+    /**
+     * First-parent commits in `from..to` whose diff against their first parent
+     * touches any of `paths`; null when git cannot tell (T12742). Any hit —
+     * merge or not — refuses the stand-in. Defaults to
+     * `git log --first-parent -- <paths>`.
+     */
+    touchingCommits?: (from: string, to: string, paths: readonly string[], cwd: string) => MainCommit[] | null;
 }
 /**
  * Whether the project opted in to merge-commit CI as test/QA evidence
@@ -216,6 +255,157 @@ export declare function evaluateJobs(globs: readonly string[], checks: readonly
  * @task T12634
  */
 export declare function evaluateMergeCommitChecks(required: readonly string[], checks: readonly CommitCheck[], mergeCommitSha: string, opts?: EvaluateMergeCommitChecksOptions): MergeCommitCheckResult;
+/** Result of {@link supersededOnMerge}. */
+export type SupersededOnMergeResult = {
+    ok: true;
+    names: string[];
+} | {
+    ok: false;
+    reason: string;
+};
+/**
+ * Whether every required check left unproven on the merge commit was only
+ * SUPERSEDED there (T12742): its latest merge-commit verdict is `cancelled`
+ * or `skipped`, and no run of a required check or of a job in a pinned
+ * workflow on the merge commit — any attempt — concluded with a failure. A
+ * failed, timed-out, pending or missing check is never superseded. Pure.
+ *
+ * @param required - Required check names.
+ * @param checks - Every check fetched for the merge commit (and PR head).
+ * @param mergeCommitSha - The merge commit.
+ * @param opts - Tree-equivalent PR head and pins, as for {@link evaluateMergeCommitChecks}.
+ * @returns The superseded names, or why a later main run may not stand in.
+ * @task T12742
+ */
+export declare function supersededOnMerge(required: readonly string[], checks: readonly CommitCheck[], mergeCommitSha: string, opts?: EvaluateMergeCommitChecksOptions): SupersededOnMergeResult;
+/** Inputs of {@link findGreenDescendant}. */
+export interface FindGreenDescendantInput {
+    /** Required check names. */
+    required: readonly string[];
+    /** Checks already fetched for the merge commit (and a tree-equivalent PR head). */
+    checks: readonly CommitCheck[];
+    /** The merge commit. */
+    mergeCommitSha: string;
+    /** Tree-equivalent PR head, when one was proven. */
+    treeEquivalentSha?: string;
+    /** Required-name → app/workflow pin. */
+    pins: Record<string, RequiredCheckPinSpec>;
+    /** The PR's changed paths; no commit in the descendant range may touch them. */
+    changedPaths: readonly string[];
+    /**
+     * The PR's final head (`headRefOid`). Its latest `pull_request` runs must be
+     * green for every superseded check: a later main run never vouches for a
+     * PR that was not itself green.
+     */
+    prHeadSha?: string;
+    /** Default-branch ref (`origin/main`). */
+    ref: string;
+    /** Repository work tree. */
+    cwd: string;
+    /** Checks for one SHA. */
+    fetchChecks: NonNullable<ResolveCiEvidenceOptions['fetchChecks']>;
+    /** Later first-parent commits of `ref`, oldest first, bounded. */
+    listDescendants: NonNullable<ResolveCiEvidenceOptions['listDescendants']>;
+    /** First-parent commits in a range touching paths. */
+    touchingCommits: NonNullable<ResolveCiEvidenceOptions['touchingCommits']>;
+    /** Ancestry test. */
+    isAncestor: NonNullable<ResolveCiEvidenceOptions['isAncestor']>;
+}
+/** Result of {@link findGreenDescendant}. */
+export type FindGreenDescendantResult = {
+    ok: true;
+    /** The stand-in commit. */
+    sha: string;
+    /** Checks fetched for the stand-in and for the PR head. */
+    checks: CommitCheck[];
+    /** `<merge>..<sha>`, proven to leave the PR's files and CI definitions untouched. */
+    range: string;
+    /** The PR head whose `pull_request` runs were green for every superseded check. */
+    prHeadSha: string;
+} | {
+    ok: false;
+    reason: string;
+};
+/**
+ * Find a later default-branch commit whose green `push` CI stands in for a
+ * merge-commit run that a concurrency group cancelled (T12742).
+ *
+ * The stand-in's CI tested the DESCENDANT's tree, not the merge tree. It is
+ * accepted only when that difference cannot matter to the PR:
+ *  - the merge commit must be superseded, not failed ({@link supersededOnMerge});
+ *  - the PR's own final head (`prHeadSha`) must have a green latest
+ *    `pull_request` run for every superseded check — a later fix on main
+ *    never rescues a broken PR;
+ *  - candidates are the first {@link CI_DESCENDANT_MAX_CANDIDATES} first-parent
+ *    commits of `ref` within {@link CI_DESCENDANT_MAX_AGE_SECONDS} of the
+ *    merge, each a proven descendant (`git merge-base --is-ancestor`);
+ *  - NO commit in `merge..candidate` — merge commits included — may touch the
+ *    PR's changed paths or a CI definition ({@link ciDefinitionPaths}): a
+ *    later merge could otherwise fix the PR's code or weaken the workflow
+ *    that judged it (drop steps or filters, add `continue-on-error`);
+ *  - the FIRST candidate with a decisive verdict decides: every superseded
+ *    check green on its own `push` runs accepts it, a failure on it (or any
+ *    failed job of a pinned workflow) refuses, and a PENDING run refuses with
+ *    "wait for <sha>" — a later green run is never shopped for past one that
+ *    is red or may still go red. Only cancelled, skipped and missing
+ *    (never-started) runs move on to the next candidate.
+ *
+ * @param input - Merge-commit checks, pins, changed paths, PR head and injected I/O.
+ * @returns The stand-in SHA, its checks and proven range, or the refusal reason.
+ * @task T12742
+ */
+export declare function findGreenDescendant(input: FindGreenDescendantInput): Promise<FindGreenDescendantResult>;
+/**
+ * Default {@link ResolveCiEvidenceOptions.listDescendants} (T12742): the
+ * first-parent commits of `ref` that descend from `mergeSha`, oldest first,
+ * bounded to {@link CI_DESCENDANT_MAX_CANDIDATES} committed within
+ * {@link CI_DESCENDANT_MAX_AGE_SECONDS} of the merge commit.
+ *
+ * @param mergeSha - The merge commit.
+ * @param ref - Default-branch ref (`origin/main`).
+ * @param cwd - Repository work tree.
+ * @returns Candidate SHAs, or null when git cannot read them.
+ * @task T12742
+ */
+export declare function listMainDescendants(mergeSha: string, ref: string, cwd: string): string[] | null;
+/**
+ * Default {@link ResolveCiEvidenceOptions.touchingCommits} (T12742): the
+ * first-parent commits in `from..to` that changed any of `paths`. With
+ * `--first-parent`, git judges each commit's path-limited change against its
+ * first parent only, so a merge that brought another PR's edit is listed as
+ * a merge, and a direct (non-merge) commit as a non-merge.
+ *
+ * @param from - Exclusive start (the merge commit).
+ * @param to - Inclusive end (the candidate).
+ * @param paths - The PR's changed paths.
+ * @param cwd - Repository work tree.
+ * @returns The touching commits with their parent counts, or null on a git error.
+ * @task T12742
+ */
+export declare function listPathTouchingMainCommits(from: string, to: string, paths: readonly string[], cwd: string): MainCommit[] | null;
+/**
+ * Re-check, at `cleo complete`, a `ci:` atom that leaned on a later main
+ * commit (T12742). A completed conclusion is NOT immutable: a GitHub re-run
+ * adds a newer attempt that can go red. Every check judged on the
+ * descendant is re-fetched and its latest `push` attempt (same app and
+ * workflow) must still be `success`; each such check's latest
+ * `pull_request` attempt on the recorded PR head must be too. Atoms without
+ * `descendantSha` pass untouched.
+ *
+ * @param atom - The recorded `ci:` atom.
+ * @param cwd - Repository work tree for `gh`.
+ * @param fetchChecks - Checks for one SHA; defaults to the GitHub REST API.
+ * @returns Ok, or why the stand-in no longer holds.
+ * @task T12742
+ */
+export declare function recheckCiDescendantAtom(atom: Extract<EvidenceAtom, {
+    kind: 'ci';
+}>, cwd: string, fetchChecks?: NonNullable<ResolveCiEvidenceOptions['fetchChecks']>): Promise<{
+    ok: true;
+} | {
+    ok: false;
+    reason: string;
+}>;
 /**
  * Validate a `ci:<pr>` atom end to end.
  *

package/dist/release/ci-evidence.d.ts.map

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