@cleocode/core 2026.7.1 → 2026.8.1

package/dist/selfimprove/run-loop.d.ts

@@ -56,7 +56,7 @@ import { type ExecutionEnvBackend } from '../llm/pi/resolve-execution-env.js';
 import { type ToolGuard } from '../tools/guard.js';
 import { type CircuitBreakerState, DEFAULT_BUDGET, type SelfImproveBudget } from './budget.js';
 import { type DhqAdapter } from './dhq-adapter.js';
-import { type CommandRunner, type DraftPrResult } from './draft-pr.js';
+import { type CommandRunner, type DraftPrResult, type WorktreeProvisioner, type WorktreeRemover } from './draft-pr.js';
 import { type DiffEntry } from './envelope-diff.js';
 import { type FixGenerator, type FixGenResult } from './fix-gen.js';
 import { type ReplayDispatch } from './replay.js';
@@ -120,6 +120,14 @@ export interface RunSelfImproveOptions {
      * tests so the capstone proves the egress WITHOUT a real `gh`/`git` invocation.
      */
     readonly draftPrRun?: CommandRunner;
+    /**
+     * Test seam: inject the draft-PR isolation-worktree provisioner (T12007).
+     * Defaults to `@cleocode/worktree`'s `addTransientWorktree`. Supplied by tests
+     * so the capstone proves the egress WITHOUT a real git repo / remote.
+     */
+    readonly draftPrProvisionWorktree?: WorktreeProvisioner;
+    /** Test seam: inject the draft-PR isolation-worktree remover (T12007). */
+    readonly draftPrRemoveWorktree?: WorktreeRemover;
     /** Test seam: inject the guard backing the in-process fallback env. */
     readonly guard?: ToolGuard;
     /** Test seam: inject the run id (defaults to a timestamped id). */

package/dist/selfimprove/run-loop.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"run-loop.d.ts","sourceRoot":"","sources":["../../src/selfimprove/run-loop.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAqDG;AAGH,OAAO,EAAE,KAAK,mBAAmB,EAAuB,MAAM,oCAAoC,CAAC;AAGnG,OAAO,EAAmB,KAAK,SAAS,EAAE,MAAM,mBAAmB,CAAC;AACpE,OAAO,EAGL,KAAK,mBAAmB,EACxB,cAAc,EAEd,KAAK,iBAAiB,EACvB,MAAM,aAAa,CAAC;AACrB,OAAO,EAAoB,KAAK,UAAU,EAAE,MAAM,kBAAkB,CAAC;AACrE,OAAO,EACL,KAAK,aAAa,EAClB,KAAK,aAAa,EAElB,KAAK,mBAAmB,EACxB,KAAK,eAAe,EACrB,MAAM,eAAe,CAAC;AACvB,OAAO,EAAuB,KAAK,SAAS,EAAiB,MAAM,oBAAoB,CAAC;AACxF,OAAO,EAEL,KAAK,YAAY,EACjB,KAAK,YAAY,EAGlB,MAAM,cAAc,CAAC;AACtB,OAAO,EAAE,KAAK,cAAc,EAAkB,MAAM,aAAa,CAAC;AAGlE,0CAA0C;AAC1C,MAAM,WAAW,qBAAqB;IACpC,qEAAqE;IACrE,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC;IAC1B;;;OAGG;IACH,QAAQ,CAAC,QAAQ,EAAE,cAAc,CAAC;IAClC;;;;;;OAMG;IACH,QAAQ,CAAC,OAAO,CAAC,EAAE,OAAO,CAAC;IAC3B,oFAAoF;IACpF,QAAQ,CAAC,GAAG,CAAC,EAAE,MAAM,CAAC;IACtB;;;;;OAKG;IACH,QAAQ,CAAC,OAAO,CAAC,EAAE,mBAAmB,CAAC;IACvC,6EAA6E;IAC7E,QAAQ,CAAC,aAAa,CAAC,EAAE,MAAM,CAAC;IAChC,8EAA8E;IAC9E,QAAQ,CAAC,MAAM,CAAC,EAAE,OAAO,CAAC,iBAAiB,CAAC,CAAC;IAC7C;;;;;OAKG;IACH,QAAQ,CAAC,YAAY,CAAC,EAAE,MAAM,OAAO,CAAC,OAAO,CAAC,CAAC;IAC/C,6EAA6E;IAC7E,QAAQ,CAAC,OAAO,CAAC,EAAE,UAAU,CAAC;IAC9B;;;;;;;OAOG;IACH,QAAQ,CAAC,YAAY,CAAC,EAAE,YAAY,CAAC;IACrC;;;;OAIG;IACH,QAAQ,CAAC,eAAe,CAAC,EAAE,OAAO,CAAC;IACnC;;;;OAIG;IACH,QAAQ,CAAC,UAAU,CAAC,EAAE,aAAa,CAAC;IACpC;;;;OAIG;IACH,QAAQ,CAAC,wBAAwB,CAAC,EAAE,mBAAmB,CAAC;IACxD,0EAA0E;IAC1E,QAAQ,CAAC,qBAAqB,CAAC,EAAE,eAAe,CAAC;IACjD,uEAAuE;IACvE,QAAQ,CAAC,KAAK,CAAC,EAAE,SAAS,CAAC;IAC3B,mEAAmE;IACnE,QAAQ,CAAC,KAAK,CAAC,EAAE,MAAM,CAAC;IACxB,gEAAgE;IAChE,QAAQ,CAAC,GAAG,CAAC,EAAE,MAAM,MAAM,CAAC;CAC7B;AAED,qDAAqD;AACrD,MAAM,MAAM,UAAU;AACpB,gEAAgE;AAC9D,OAAO;AACT,4DAA4D;GAC1D,oBAAoB;AACtB,sEAAsE;GACpE,kBAAkB;AACpB,0CAA0C;GACxC,QAAQ,CAAC;AAEb,gEAAgE;AAChE,MAAM,WAAW,iBAAiB;IAChC,4BAA4B;IAC5B,QAAQ,CAAC,OAAO,EAAE,UAAU,CAAC;IAC7B,6BAA6B;IAC7B,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC;IAC1B,iDAAiD;IACjD,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,yDAAyD;IACzD,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC;IAC3B,uDAAuD;IACvD,QAAQ,CAAC,WAAW,EAAE,SAAS,SAAS,EAAE,CAAC;IAC3C,oFAAoF;IACpF,QAAQ,CAAC,YAAY,EAAE,MAAM,GAAG,IAAI,CAAC;IACrC,yFAAyF;IACzF,QAAQ,CAAC,OAAO,EAAE,aAAa,GAAG,IAAI,CAAC;IACvC;;;;;OAKG;IACH,QAAQ,CAAC,MAAM,EAAE,YAAY,GAAG,IAAI,CAAC;IACrC,uCAAuC;IACvC,QAAQ,CAAC,OAAO,EAAE,mBAAmB,CAAC;CACvC;AAcD;;;;;;;;;;;;;;;;;;;GAmBG;AACH,wBAAsB,cAAc,CAAC,IAAI,EAAE,qBAAqB,GAAG,OAAO,CAAC,iBAAiB,CAAC,CAqO5F;AA4CD,OAAO,EAAE,cAAc,EAAE,CAAC"}

package/dist/selfimprove/run-loop.js

@@ -58,7 +58,7 @@ import { LeaseUnavailableError } from '../store/writer-lease.js';
 import { createToolGuard } from '../tools/guard.js';
 import { CircuitBreaker, DEFAULT_BUDGET, resolveBudget, } from './budget.js';
 import { createDhqAdapter } from './dhq-adapter.js';
-import { openDraftPr } from './draft-pr.js';
+import { openDraftPr, } from './draft-pr.js';
 import { computeQuestionHash, diffEnvelopes } from './envelope-diff.js';
 import { createLlmFixGenerator, fixPatchPath, generateFixPatch, } from './fix-gen.js';
 import { replayScenario } from './replay.js';
@@ -248,6 +248,12 @@ export async function runSelfImprove(opts) {
                 execute,
                 ...(opts.cwd !== undefined ? { cwd: opts.cwd } : {}),
                 ...(opts.draftPrRun !== undefined ? { run: opts.draftPrRun } : {}),
+                ...(opts.draftPrProvisionWorktree !== undefined
+                    ? { provisionWorktree: opts.draftPrProvisionWorktree }
+                    : {}),
+                ...(opts.draftPrRemoveWorktree !== undefined
+                    ? { removeWorktree: opts.draftPrRemoveWorktree }
+                    : {}),
             });
             if (draftPr.kind === 'ok') {
                 await adapter.recordPrUrl(questionHash, draftPr.prUrl);

package/dist/selfimprove/run-loop.js.map

@@ -1 +1 @@
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package/dist/store/agent-registry-store.d.ts.map

@@ -1 +1 @@
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package/dist/store/agent-registry-store.js

@@ -63,7 +63,6 @@ import { getCleoHome } from '../paths.js';
 import { _resetDualScopeDbCache, openDualScopeDbAtPath } from './dual-scope-db.js';
 import { migrateSanitized, reconcileJournal } from './migration-manager.js';
 import { resolveConsolidatedJournalSiblings, resolveCorePackageMigrationsFolder, } from './resolve-migrations-folder.js';
-import * as agentRegistrySchema from './schema/cleo-global/agent-registry.js';
 /**
  * Database file name within the global cleo home directory.
  *
@@ -200,7 +199,7 @@ function runAgentRegistryMigrations(nativeDb) {
     reconcileJournal(nativeDb, migrationsFolder, '_agent_registry_meta', 'agent-registry', resolveConsolidatedJournalSiblings('drizzle-agent-registry'));
     // Create the drizzle ORM wrapper and run any pending migrations (the
     // health-probe ledger tables). The schema is the prefixed consolidated shape.
-    const db = drizzle({ client: nativeDb, schema: agentRegistrySchema });
+    const db = drizzle({ client: nativeDb });
     migrateSanitized(db, { migrationsFolder });
 }
 // ---------------------------------------------------------------------------

package/dist/store/agent-registry-store.js.map

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package/dist/store/background-jobs.d.ts

@@ -21,7 +21,6 @@
  * @task T11455
  */
 import type { NodeSQLiteDatabase } from './sqlite.js';
-import type * as schema from './tasks-schema.js';
 import { type BackgroundJobStatus } from './tasks-schema.js';
 export type { BackgroundJobStatus };
 /**
@@ -59,7 +58,7 @@ export interface BackgroundJobManagerConfig {
     /** How long (ms) to retain completed/failed/cancelled jobs. Default: 3 600 000 (1 h). */
     retentionMs?: number;
 }
-type TasksDb = NodeSQLiteDatabase<typeof schema>;
+type TasksDb = NodeSQLiteDatabase;
 /**
  * Drizzle-backed persistence layer for background jobs.
  *

package/dist/store/background-jobs.d.ts.map

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package/dist/store/conduit-sqlite.js

@@ -76,7 +76,6 @@ import { createRequire } from 'node:module';
 import { openDualScopeDb, resolveDualScopeDbPath } from './dual-scope-db.js';
 import { migrateSanitized, reconcileJournal } from './migration-manager.js';
 import { resolveConsolidatedJournalSiblings, resolveCorePackageMigrationsFolder, } from './resolve-migrations-folder.js';
-import * as conduitSchema from './schema/cleo-project/conduit.js';
 import { applyPerfPragmas } from './sqlite-pragmas.js';
 const _require = createRequire(import.meta.url);
 const { DatabaseSync } = _require('node:sqlite');
@@ -230,7 +229,7 @@ function runConduitMigrations(nativeDb) {
     // T11829: conduit shares the consolidated PROJECT cleo.db journal — pass the
     // OTHER lineages so their rows are not deleted as cross-lineage orphans.
     reconcileJournal(nativeDb, migrationsFolder, '_conduit_meta', 'conduit', resolveConsolidatedJournalSiblings('drizzle-conduit'));
-    const db = _getDrizzle()({ client: nativeDb, schema: conduitSchema });
+    const db = _getDrizzle()({ client: nativeDb });
     migrateSanitized(db, { migrationsFolder });
 }
 /**

package/dist/store/conduit-sqlite.js.map

@@ -1 +1 @@
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package/dist/store/cross-db-cleanup.d.ts

@@ -109,7 +109,45 @@ export declare function reconcileOrphanedRefs(cwd?: string): Promise<{
     observationsFixed: number;
     linksRemoved: number;
 }>;
+/**
+ * Verify a session ID through the caller's shared tasks database handle.
+ *
+ * @param sessionId - Session ID to verify.
+ * @param tasksDb - Shared tasks database handle.
+ * @returns True when the session exists.
+ */
 export declare function sessionExistsInTasksDb(sessionId: string, tasksDb: Awaited<ReturnType<typeof import('./sqlite.js').getDb>>): Promise<boolean>;
+/**
+ * Verify a session ID through fresh read-only connections and the caller's live handle.
+ *
+ * This is the bounded fallback for callers whose shared project handle either
+ * closed during the primary query or returned a stale empty result. It does not
+ * evict the dual-scope cache, so other domains retaining the shared handle stay
+ * live while the probe runs. The live handle is checked last because it can own
+ * a committed, unlinked SQLite file that is no longer reachable by path.
+ *
+ * @param sessionId - Session ID to verify.
+ * @param tasksDb - Shared tasks handle whose native path anchors the probe when available.
+ * @param cwd - Project root used to resolve the project-scope cleo.db.
+ * @returns True when the session is present in any live project session table.
+ * @throws Error when no database candidate can be read, distinguishing unavailable validation from absence.
+ * @task T12034
+ */
+export declare function sessionExistsInTasksDbFresh(sessionId: string, tasksDb: Awaited<ReturnType<typeof import('./sqlite.js').getDb>> | null, cwd?: string): Promise<boolean>;
+/**
+ * Verify a task ID through fresh read-only connections and the caller's live handle.
+ *
+ * Checks both the active legacy tasks table and its consolidated prefixed
+ * counterpart so callers remain correct during the E3-to-E6 transition.
+ *
+ * @param taskId - Task ID to verify.
+ * @param tasksDb - Shared tasks handle used only when no project root is available.
+ * @param cwd - Project root used to resolve the authoritative project database.
+ * @returns True when the task exists in either supported project table.
+ * @throws Error when no database candidate can be read, distinguishing unavailable validation from absence.
+ * @task T12034
+ */
+export declare function taskExistsInTasksDbFresh(taskId: string, tasksDb: Awaited<ReturnType<typeof import('./sqlite.js').getDb>> | null, cwd?: string): Promise<boolean>;
 /**
  * Verify an agent exists in the global Agent Registry before creating cross-DB references.
  * Returns true if the agent_id exists in the global cleo.db agent_registry_agents table.

package/dist/store/cross-db-cleanup.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"cross-db-cleanup.d.ts","sourceRoot":"","sources":["../../src/store/cross-db-cleanup.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAMH;;;;;;;;;;;;;;;;;;;;;;GAsBG;AACH,wBAAsB,4BAA4B,CAAC,MAAM,EAAE,MAAM,EAAE,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CA+C9F;AAED;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,+BAA+B,CACnD,SAAS,EAAE,MAAM,EACjB,GAAG,CAAC,EAAE,MAAM,GACX,OAAO,CAAC,IAAI,CAAC,CAkBf;AAED;;;;;;;;;;;;;;;;;GAiBG;AACH,wBAAsB,mBAAmB,CACvC,MAAM,EAAE,MAAM,EACd,OAAO,EAAE,OAAO,CAAC,UAAU,CAAC,cAAc,aAAa,EAAE,KAAK,CAAC,CAAC,GAC/D,OAAO,CAAC,OAAO,CAAC,CASlB;AAED;;;;;;;;;;;;;;;;;GAiBG;AACH;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,qBAAqB,CAAC,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC;IACjE,cAAc,EAAE,MAAM,CAAC;IACvB,iBAAiB,EAAE,MAAM,CAAC;IAC1B,YAAY,EAAE,MAAM,CAAC;CACtB,CAAC,CAmHD;AAED;;;;;;GAMG;AACH,wBAAsB,sBAAsB,CAC1C,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,OAAO,CAAC,UAAU,CAAC,cAAc,aAAa,EAAE,KAAK,CAAC,CAAC,GAC/D,OAAO,CAAC,OAAO,CAAC,CASlB;AAyGD;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,2BAA2B,CAC/C,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,OAAO,CAAC,UAAU,CAAC,cAAc,aAAa,EAAE,KAAK,CAAC,CAAC,GAAG,IAAI,EACvE,GAAG,CAAC,EAAE,MAAM,GACX,OAAO,CAAC,OAAO,CAAC,CAElB;AAED;;;;;;;;;;;;GAYG;AACH,wBAAsB,wBAAwB,CAC5C,MAAM,EAAE,MAAM,EACd,OAAO,EAAE,OAAO,CAAC,UAAU,CAAC,cAAc,aAAa,EAAE,KAAK,CAAC,CAAC,GAAG,IAAI,EACvE,GAAG,CAAC,EAAE,MAAM,GACX,OAAO,CAAC,OAAO,CAAC,CAElB;AAED;;;;;;;;;;;;GAYG;AACH,wBAAsB,4BAA4B,CAChD,OAAO,EAAE,MAAM,EACf,GAAG,CAAC,EAAE,MAAM,GACX,OAAO,CAAC,OAAO,CAAC,CA6BlB"}

package/dist/store/cross-db-cleanup.js

@@ -269,6 +269,13 @@ export async function reconcileOrphanedRefs(cwd) {
     }
     return result;
 }
+/**
+ * Verify a session ID through the caller's shared tasks database handle.
+ *
+ * @param sessionId - Session ID to verify.
+ * @param tasksDb - Shared tasks database handle.
+ * @returns True when the session exists.
+ */
 export async function sessionExistsInTasksDb(sessionId, tasksDb) {
     const { sessions } = await import('./tasks-schema.js');
     const { eq: eqOp } = await import('drizzle-orm');
@@ -279,6 +286,124 @@ export async function sessionExistsInTasksDb(sessionId, tasksDb) {
         .all();
     return result.length > 0;
 }
+const FRESH_PROBE_ATTEMPTS = 3;
+const FRESH_PROBE_RETRY_DELAY_MS = 25;
+function projectRecordExists(probe, id, tableNames) {
+    const availableRows = probe
+        .prepare("SELECT name FROM sqlite_master WHERE type = 'table' AND name IN (?, ?)")
+        .all(...tableNames);
+    const availableNames = new Set();
+    for (const row of availableRows) {
+        const name = row['name'];
+        if (name === 'sessions' ||
+            name === 'tasks_sessions' ||
+            name === 'tasks' ||
+            name === 'tasks_tasks') {
+            availableNames.add(name);
+        }
+    }
+    for (const tableName of tableNames) {
+        if (!availableNames.has(tableName))
+            continue;
+        const row = probe
+            .prepare(`SELECT 1 AS present FROM ${tableName} WHERE id = ? LIMIT 1`)
+            .get(id);
+        if (row !== undefined)
+            return true;
+    }
+    return false;
+}
+async function recordExistsInTasksDbFresh(id, tableNames, tasksDb, cwd) {
+    const [{ resolveDualScopeDbPath }, { openNativeDatabase }] = await Promise.all([
+        import('./dual-scope-db.js'),
+        import('./sqlite-native.js'),
+    ]);
+    const sharedNative = tasksDb?.$client;
+    const preferredPath = cwd !== undefined
+        ? resolveDualScopeDbPath('project', cwd)
+        : (sharedNative?.location() ?? resolveDualScopeDbPath('project'));
+    const sharedPath = sharedNative?.location();
+    const probePath = (dbPath) => {
+        const probe = openNativeDatabase(dbPath, {
+            readonly: true,
+        });
+        try {
+            return projectRecordExists(probe, id, tableNames);
+        }
+        finally {
+            probe.close();
+        }
+    };
+    const candidatePaths = sharedPath != null && sharedPath !== preferredPath
+        ? [preferredPath, sharedPath]
+        : [preferredPath];
+    let completedProbe = false;
+    for (let attempt = 0; attempt < FRESH_PROBE_ATTEMPTS; attempt += 1) {
+        for (const dbPath of candidatePaths) {
+            try {
+                const exists = probePath(dbPath);
+                completedProbe = true;
+                if (exists)
+                    return true;
+            }
+            catch {
+                // A stale candidate may disappear between path discovery and the read-only open.
+            }
+        }
+        if (sharedNative?.isOpen) {
+            try {
+                const exists = projectRecordExists(sharedNative, id, tableNames);
+                completedProbe = true;
+                if (exists)
+                    return true;
+            }
+            catch {
+                // The caller's handle may close after the liveness check.
+            }
+        }
+        if (attempt + 1 < FRESH_PROBE_ATTEMPTS) {
+            await new Promise((resolve) => setTimeout(resolve, FRESH_PROBE_RETRY_DELAY_MS));
+        }
+    }
+    if (completedProbe)
+        return false;
+    throw new Error(`Unable to verify project record ${id}: no readable tasks database candidate`);
+}
+/**
+ * Verify a session ID through fresh read-only connections and the caller's live handle.
+ *
+ * This is the bounded fallback for callers whose shared project handle either
+ * closed during the primary query or returned a stale empty result. It does not
+ * evict the dual-scope cache, so other domains retaining the shared handle stay
+ * live while the probe runs. The live handle is checked last because it can own
+ * a committed, unlinked SQLite file that is no longer reachable by path.
+ *
+ * @param sessionId - Session ID to verify.
+ * @param tasksDb - Shared tasks handle whose native path anchors the probe when available.
+ * @param cwd - Project root used to resolve the project-scope cleo.db.
+ * @returns True when the session is present in any live project session table.
+ * @throws Error when no database candidate can be read, distinguishing unavailable validation from absence.
+ * @task T12034
+ */
+export async function sessionExistsInTasksDbFresh(sessionId, tasksDb, cwd) {
+    return recordExistsInTasksDbFresh(sessionId, ['sessions', 'tasks_sessions'], tasksDb, cwd);
+}
+/**
+ * Verify a task ID through fresh read-only connections and the caller's live handle.
+ *
+ * Checks both the active legacy tasks table and its consolidated prefixed
+ * counterpart so callers remain correct during the E3-to-E6 transition.
+ *
+ * @param taskId - Task ID to verify.
+ * @param tasksDb - Shared tasks handle used only when no project root is available.
+ * @param cwd - Project root used to resolve the authoritative project database.
+ * @returns True when the task exists in either supported project table.
+ * @throws Error when no database candidate can be read, distinguishing unavailable validation from absence.
+ * @task T12034
+ */
+export async function taskExistsInTasksDbFresh(taskId, tasksDb, cwd) {
+    return recordExistsInTasksDbFresh(taskId, ['tasks', 'tasks_tasks'], tasksDb, cwd);
+}
 /**
  * Verify an agent exists in the global Agent Registry before creating cross-DB references.
  * Returns true if the agent_id exists in the global cleo.db agent_registry_agents table.

package/dist/store/cross-db-cleanup.js.map

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package/dist/store/db-helpers.d.ts

@@ -9,9 +9,8 @@
 import type { ArchiveReasonValue, Session, Task } from '@cleocode/contracts';
 import type { NodeSQLiteDatabase } from 'drizzle-orm/node-sqlite';
 import type { NewTaskRow } from './tasks-schema.js';
-import * as schema from './tasks-schema.js';
 /** Drizzle database instance type. */
-type DrizzleDb = NodeSQLiteDatabase<typeof schema>;
+type DrizzleDb = NodeSQLiteDatabase;
 /** Archive-specific fields for task upsert. */
 export interface ArchiveFields {
     archivedAt?: string;

package/dist/store/db-helpers.d.ts.map

@@ -1 +1 @@
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