@cleocode/core 2026.6.14 → 2026.6.17

package/dist/check/pr-gate.d.ts

@@ -129,10 +129,14 @@ export declare function selectPrGates(opts: Pick<RunPrGateOptions, 'full' | 'onl
 };
 /**
  * Build the argv for a gate, wrapping heavy gates in a cgroup-capped
- * `systemd-run --user --scope` when available on Linux.
+ * `systemd-run --user --scope` (via the spawn-wrapper SSoT) when available.
+ *
+ * Delegates to {@link buildSpawnArgs} from
+ * `packages/core/src/resources/spawn-wrapper.ts` — the ONLY constructor of
+ * `systemd-run` argv for cleo children (T11993 SSoT enforcement).
  *
  * @param gate the gate definition
- * @param memoryMax MemoryMax value (e.g. `16G`)
+ * @param memoryMax MemoryMax value (e.g. `16G`); passed as a resource override.
  * @returns `{ command, args, capped }`
  * @internal exported for unit testing
  */

package/dist/check/pr-gate.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"pr-gate.d.ts","sourceRoot":"","sources":["../../src/check/pr-gate.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAMH;;;GAGG;AACH,MAAM,WAAW,SAAS;IACxB,2EAA2E;IAC3E,QAAQ,CAAC,EAAE,EAAE,MAAM,CAAC;IACpB,iDAAiD;IACjD,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,2DAA2D;IAC3D,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,0CAA0C;IAC1C,QAAQ,CAAC,IAAI,EAAE,SAAS,MAAM,EAAE,CAAC;IACjC;;;OAGG;IACH,QAAQ,CAAC,KAAK,EAAE,OAAO,CAAC;IACxB;;;;OAIG;IACH,QAAQ,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC;IAC/B,4CAA4C;IAC5C,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC;CAC9B;AAQD;;;;;;;GAOG;AACH,eAAO,MAAM,QAAQ,EAAE,SAAS,SAAS,EAwH/B,CAAC;AAEX,gCAAgC;AAChC,MAAM,WAAW,eAAe;IAC9B,8CAA8C;IAC9C,QAAQ,CAAC,EAAE,EAAE,MAAM,CAAC;IACpB,kBAAkB;IAClB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,2EAA2E;IAC3E,QAAQ,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,SAAS,CAAC;IAC7C,+EAA+E;IAC/E,QAAQ,CAAC,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACjC,2CAA2C;IAC3C,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;IAC5B,sDAAsD;IACtD,QAAQ,CAAC,MAAM,EAAE,OAAO,CAAC;IACzB,yEAAyE;IACzE,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;CAC7B;AAED,iDAAiD;AACjD,MAAM,WAAW,aAAa;IAC5B,6CAA6C;IAC7C,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC;IAC1B,8CAA8C;IAC9C,QAAQ,CAAC,MAAM,EAAE,OAAO,CAAC;IACzB,2CAA2C;IAC3C,QAAQ,CAAC,KAAK,EAAE,SAAS,eAAe,EAAE,CAAC;IAC3C,sBAAsB;IACtB,QAAQ,CAAC,OAAO,EAAE;QAAE,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;QAAC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;QAAC,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAA;KAAE,CAAC;CAC9F;AAED,mDAAmD;AACnD,MAAM,WAAW,gBAAgB;IAC/B,yEAAyE;IACzE,QAAQ,CAAC,IAAI,CAAC,EAAE,OAAO,CAAC;IACxB,yEAAyE;IACzE,QAAQ,CAAC,IAAI,CAAC,EAAE,SAAS,MAAM,EAAE,CAAC;IAClC,+EAA+E;IAC/E,QAAQ,CAAC,SAAS,CAAC,EAAE,OAAO,CAAC;IAC7B,0DAA0D;IAC1D,QAAQ,CAAC,SAAS,CAAC,EAAE,MAAM,CAAC;IAC5B;;;;OAIG;IACH,QAAQ,CAAC,GAAG,CAAC,EAAE,MAAM,CAAC;IACtB;;;OAGG;IACH,QAAQ,CAAC,UAAU,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,IAAI,CAAC;CAC9C;AAED;;;;;;;GAOG;AACH,wBAAgB,aAAa,CAAC,IAAI,EAAE,IAAI,CAAC,gBAAgB,EAAE,MAAM,GAAG,MAAM,CAAC,GAAG;IAC5E,KAAK,EAAE,SAAS,EAAE,CAAC;IACnB,OAAO,EAAE,SAAS,EAAE,CAAC;CACtB,CAWA;AAED;;;;;;;;;;;;GAYG;AACH,wBAAgB,aAAa,CAC3B,IAAI,EAAE,SAAS,EACf,SAAS,EAAE,MAAM,GAChB;IAAE,OAAO,EAAE,MAAM,CAAC;IAAC,IAAI,EAAE,MAAM,EAAE,CAAC;IAAC,MAAM,EAAE,OAAO,CAAA;CAAE,CAatD;AAED;;;;;;;;GAQG;AACH,wBAAgB,kBAAkB,IAAI,MAAM,CAS3C;AAiBD;;;;;;;;;;;;;GAaG;AACH,wBAAgB,SAAS,CAAC,IAAI,GAAE,gBAAqB,GAAG,aAAa,CA4EpE;AAED;;;;;;;;GAQG;AACH,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,aAAa,GAAG,MAAM,CAclE"}

package/dist/check/pr-gate.js

@@ -27,6 +27,7 @@
  */
 import { spawnSync } from 'node:child_process';
 import { getProjectRoot } from '../paths.js';
+import { buildSpawnArgs, hasSystemdRun } from '../resources/spawn-wrapper.js';
 /**
  * The default MemoryMax applied to heavy gates on Linux. Matches the project's
  * standard cgroup cap for local build/test runs.
@@ -178,48 +179,29 @@ export function selectPrGates(opts) {
     const skipped = tierFiltered.filter((g) => !wanted.has(g.id));
     return { toRun, skipped };
 }
-/**
- * Is `systemd-run` available on this host? Probed once and cached for the
- * process lifetime.
- */
-let systemdRunAvailable;
-function hasSystemdRun() {
-    if (systemdRunAvailable !== undefined)
-        return systemdRunAvailable;
-    if (process.platform !== 'linux') {
-        systemdRunAvailable = false;
-        return false;
-    }
-    const probe = spawnSync('systemd-run', ['--version'], { stdio: 'ignore' });
-    systemdRunAvailable = probe.status === 0;
-    return systemdRunAvailable;
-}
 /**
  * Build the argv for a gate, wrapping heavy gates in a cgroup-capped
- * `systemd-run --user --scope` when available on Linux.
+ * `systemd-run --user --scope` (via the spawn-wrapper SSoT) when available.
+ *
+ * Delegates to {@link buildSpawnArgs} from
+ * `packages/core/src/resources/spawn-wrapper.ts` — the ONLY constructor of
+ * `systemd-run` argv for cleo children (T11993 SSoT enforcement).
  *
  * @param gate the gate definition
- * @param memoryMax MemoryMax value (e.g. `16G`)
+ * @param memoryMax MemoryMax value (e.g. `16G`); passed as a resource override.
  * @returns `{ command, args, capped }`
  * @internal exported for unit testing
  */
 export function buildGateArgv(gate, memoryMax) {
     if (gate.heavy && hasSystemdRun()) {
+        const built = buildSpawnArgs(gate.command, gate.args, {
+            scopeClass: 'test',
+            resources: { memoryMax },
+        });
         return {
-            command: 'systemd-run',
-            args: [
-                '--user',
-                '--scope',
-                '--quiet',
-                '-p',
-                `MemoryMax=${memoryMax}`,
-                '-p',
-                'MemorySwapMax=0',
-                '--',
-                gate.command,
-                ...gate.args,
-            ],
-            capped: true,
+            command: built.command,
+            args: built.args,
+            capped: built.mode === 'systemd',
         };
     }
     return { command: gate.command, args: [...gate.args], capped: false };

package/dist/check/pr-gate.js.map

@@ -1 +1 @@
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package/dist/config/config-repair.d.ts

@@ -0,0 +1,70 @@
+/**
+ * Config file repair — crash-safe restore from backup (Amendment 1, T11997).
+ *
+ * Checks a JSON config file for parse failures.  When the live file is
+ * corrupt, the routine:
+ *
+ *   1. Quarantines the corrupt file beside the target (`.corrupt-<iso>`).
+ *   2. Scans available backup snapshots for the NEWEST valid (parseable) candidate.
+ *   3. Restores the best candidate atomically (tmp-rename) only when JSON parse
+ *      fails AND no active write window is detected.
+ *   4. Appends a structured audit record to `.cleo/audit/config-repair.jsonl`
+ *      that the `cleo health` surface can consume.
+ *
+ * Key invariants (Amendment 1):
+ *   - Never silently restore a stale backup — always quarantine first, then
+ *     restore the newest valid candidate.
+ *   - Restore only when `JSON.parse` fails on the live file (not merely on
+ *     schema drift).
+ *   - A `.tmp` survivor from a previously interrupted write (write-file-atomic
+ *     pattern) takes priority over numbered backups when it is both newer and
+ *     valid JSON.
+ *
+ * @task T11997
+ * @epic T11992
+ */
+/** Outcome of a {@link repairConfigFile} call. */
+export type ConfigRepairOutcome = 'healthy' | 'restored-from-backup' | 'restored-from-tmp' | 'quarantined-no-candidate' | 'skipped-active-write';
+/** Structured result of {@link repairConfigFile}. */
+export interface ConfigRepairResult {
+    /** What happened. */
+    readonly outcome: ConfigRepairOutcome;
+    /** Absolute path to the config file that was checked/restored. */
+    readonly configPath: string;
+    /** Absolute path to the backup used for restore (when applicable). */
+    readonly restoredFrom?: string;
+    /** Absolute path to the quarantine file (when a corrupt file was renamed). */
+    readonly quarantinedTo?: string;
+    /** Human-readable detail. */
+    readonly detail: string;
+}
+/**
+ * Check and optionally repair a JSON config file.
+ *
+ * Safe to call on config paths that do not yet exist — returns `'healthy'`
+ * immediately when the file is absent (a missing file is not a corrupt file).
+ *
+ * @param configPath  - Absolute path to the config JSON file to check.
+ * @param backupDir   - Directory containing numbered `.1`, `.2`, … backups.
+ *                      Pass `null` to skip backup-based restore.
+ * @param cwd         - Project root for audit-log path resolution.
+ * @returns Structured {@link ConfigRepairResult}.
+ *
+ * @example
+ * ```ts
+ * import { repairConfigFile } from '@cleocode/core/config/config-repair';
+ *
+ * const result = await repairConfigFile(
+ *   '/home/user/.local/share/cleo/config.json',
+ *   '/home/user/.local/share/cleo/backups',
+ *   '/home/user/projects/myapp',
+ * );
+ * if (result.outcome === 'restored-from-backup') {
+ *   console.log(`Restored from ${result.restoredFrom}`);
+ * }
+ * ```
+ *
+ * @task T11997
+ */
+export declare function repairConfigFile(configPath: string, backupDir: string | null, cwd: string): Promise<ConfigRepairResult>;
+//# sourceMappingURL=config-repair.d.ts.map

package/dist/config/config-repair.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"config-repair.d.ts","sourceRoot":"","sources":["../../src/config/config-repair.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AAQH,kDAAkD;AAClD,MAAM,MAAM,mBAAmB,GAC3B,SAAS,GACT,sBAAsB,GACtB,mBAAmB,GACnB,0BAA0B,GAC1B,sBAAsB,CAAC;AAE3B,qDAAqD;AACrD,MAAM,WAAW,kBAAkB;IACjC,qBAAqB;IACrB,QAAQ,CAAC,OAAO,EAAE,mBAAmB,CAAC;IACtC,kEAAkE;IAClE,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;IAC5B,sEAAsE;IACtE,QAAQ,CAAC,YAAY,CAAC,EAAE,MAAM,CAAC;IAC/B,8EAA8E;IAC9E,QAAQ,CAAC,aAAa,CAAC,EAAE,MAAM,CAAC;IAChC,6BAA6B;IAC7B,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC;CACzB;AA0DD;;;;;;;;;;;;;;;;;;;;;;;;;;;GA2BG;AACH,wBAAsB,gBAAgB,CACpC,UAAU,EAAE,MAAM,EAClB,SAAS,EAAE,MAAM,GAAG,IAAI,EACxB,GAAG,EAAE,MAAM,GACV,OAAO,CAAC,kBAAkB,CAAC,CAqJ7B"}

package/dist/config/config-repair.js

@@ -0,0 +1,248 @@
+/**
+ * Config file repair — crash-safe restore from backup (Amendment 1, T11997).
+ *
+ * Checks a JSON config file for parse failures.  When the live file is
+ * corrupt, the routine:
+ *
+ *   1. Quarantines the corrupt file beside the target (`.corrupt-<iso>`).
+ *   2. Scans available backup snapshots for the NEWEST valid (parseable) candidate.
+ *   3. Restores the best candidate atomically (tmp-rename) only when JSON parse
+ *      fails AND no active write window is detected.
+ *   4. Appends a structured audit record to `.cleo/audit/config-repair.jsonl`
+ *      that the `cleo health` surface can consume.
+ *
+ * Key invariants (Amendment 1):
+ *   - Never silently restore a stale backup — always quarantine first, then
+ *     restore the newest valid candidate.
+ *   - Restore only when `JSON.parse` fails on the live file (not merely on
+ *     schema drift).
+ *   - A `.tmp` survivor from a previously interrupted write (write-file-atomic
+ *     pattern) takes priority over numbered backups when it is both newer and
+ *     valid JSON.
+ *
+ * @task T11997
+ * @epic T11992
+ */
+import { existsSync } from 'node:fs';
+import { appendFile, copyFile, mkdir, readFile, rename, stat, writeFile } from 'node:fs/promises';
+import { basename, dirname, join } from 'node:path';
+// ─── Constants ────────────────────────────────────────────────────────────────
+/** Maximum age of a `.tmp` file for it to be considered a "surviving write" (1 min). */
+const TMP_SURVIVOR_MAX_AGE_MS = 60_000;
+/** Audit log path relative to project root. */
+const CONFIG_REPAIR_AUDIT_FILE = '.cleo/audit/config-repair.jsonl';
+// ─── Helpers ──────────────────────────────────────────────────────────────────
+/** Parse JSON from a file path; returns `null` on any failure. */
+async function tryParseJsonFile(filePath) {
+    try {
+        const raw = await readFile(filePath, 'utf-8');
+        const parsed = JSON.parse(raw);
+        if (parsed !== null && typeof parsed === 'object' && !Array.isArray(parsed)) {
+            return parsed;
+        }
+        return null;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Enumerate numbered backup files for `fileName` under `backupDir`,
+ * sorted NEWEST first (lowest number = most recent).
+ */
+async function listNumberedBackups(fileName, backupDir) {
+    if (!existsSync(backupDir))
+        return [];
+    try {
+        const { readdir } = await import('node:fs/promises');
+        const entries = await readdir(backupDir);
+        const prefix = `${fileName}.`;
+        return entries
+            .filter((e) => e.startsWith(prefix) && /^\d+$/.test(e.slice(prefix.length)))
+            .sort((a, b) => {
+            const numA = parseInt(a.slice(prefix.length), 10);
+            const numB = parseInt(b.slice(prefix.length), 10);
+            return numA - numB; // ascending number = newest first
+        })
+            .map((e) => join(backupDir, e));
+    }
+    catch {
+        return [];
+    }
+}
+/** Append one JSON line to the repair audit log. */
+async function appendAuditLine(cwd, entry) {
+    const auditPath = join(cwd, CONFIG_REPAIR_AUDIT_FILE);
+    await mkdir(dirname(auditPath), { recursive: true });
+    await appendFile(auditPath, `${JSON.stringify(entry)}\n`, 'utf-8');
+}
+// ─── Public API ───────────────────────────────────────────────────────────────
+/**
+ * Check and optionally repair a JSON config file.
+ *
+ * Safe to call on config paths that do not yet exist — returns `'healthy'`
+ * immediately when the file is absent (a missing file is not a corrupt file).
+ *
+ * @param configPath  - Absolute path to the config JSON file to check.
+ * @param backupDir   - Directory containing numbered `.1`, `.2`, … backups.
+ *                      Pass `null` to skip backup-based restore.
+ * @param cwd         - Project root for audit-log path resolution.
+ * @returns Structured {@link ConfigRepairResult}.
+ *
+ * @example
+ * ```ts
+ * import { repairConfigFile } from '@cleocode/core/config/config-repair';
+ *
+ * const result = await repairConfigFile(
+ *   '/home/user/.local/share/cleo/config.json',
+ *   '/home/user/.local/share/cleo/backups',
+ *   '/home/user/projects/myapp',
+ * );
+ * if (result.outcome === 'restored-from-backup') {
+ *   console.log(`Restored from ${result.restoredFrom}`);
+ * }
+ * ```
+ *
+ * @task T11997
+ */
+export async function repairConfigFile(configPath, backupDir, cwd) {
+    // ── 1. If the file doesn't exist, nothing to do ───────────────────────────
+    if (!existsSync(configPath)) {
+        return {
+            outcome: 'healthy',
+            configPath,
+            detail: 'Config file does not exist; no repair needed',
+        };
+    }
+    // ── 2. Try parsing the live file ──────────────────────────────────────────
+    const liveData = await tryParseJsonFile(configPath);
+    if (liveData !== null) {
+        return {
+            outcome: 'healthy',
+            configPath,
+            detail: 'Config file is valid JSON; no repair needed',
+        };
+    }
+    // ── 3. Live file is corrupt — check for an active write window ───────────
+    // write-file-atomic leaves a `.tmp` file only briefly during an active write.
+    // If a `.tmp` file exists and is VERY new, we may be racing an in-progress
+    // write — wait for it to finish rather than clobbering it.
+    const tmpPath = `${configPath}.tmp`;
+    if (existsSync(tmpPath)) {
+        try {
+            const s = await stat(tmpPath);
+            const ageMs = Date.now() - s.mtimeMs;
+            if (ageMs < TMP_SURVIVOR_MAX_AGE_MS) {
+                // Active write window detected — do NOT restore yet
+                return {
+                    outcome: 'skipped-active-write',
+                    configPath,
+                    detail: `Temp file at ${tmpPath} is ${Math.round(ageMs / 1000)}s old — possible active write; skipping repair`,
+                };
+            }
+        }
+        catch {
+            // stat failed — ignore and proceed
+        }
+    }
+    // ── 4. Quarantine the corrupt file ───────────────────────────────────────
+    const iso = new Date().toISOString().replace(/[:.]/g, '-');
+    const quarantinePath = join(dirname(configPath), `${basename(configPath)}.corrupt-${iso}`);
+    try {
+        await copyFile(configPath, quarantinePath);
+    }
+    catch {
+        // Quarantine copy failed — proceed anyway; we can still try to restore
+    }
+    // ── 5. Find the best valid candidate (tmp survivor > numbered backups) ────
+    // Check whether the `.tmp` survivor is valid (a completed-but-not-renamed write)
+    if (existsSync(tmpPath)) {
+        const tmpData = await tryParseJsonFile(tmpPath);
+        if (tmpData !== null) {
+            // Restore from surviving .tmp: rename tmp → target atomically
+            try {
+                await rename(tmpPath, configPath);
+                await appendAuditLine(cwd, {
+                    ts: new Date().toISOString(),
+                    event: 'config-repair:restored-from-tmp',
+                    configPath,
+                    restoredFrom: tmpPath,
+                    quarantinedTo: quarantinePath,
+                    detail: 'Corrupt config replaced by surviving .tmp file (completed-but-not-renamed write)',
+                });
+                return {
+                    outcome: 'restored-from-tmp',
+                    configPath,
+                    restoredFrom: tmpPath,
+                    quarantinedTo: quarantinePath,
+                    detail: 'Config restored from surviving .tmp file',
+                };
+            }
+            catch {
+                // Rename failed — fall through to numbered backups
+            }
+        }
+    }
+    // Walk numbered backups from newest to find the first valid one
+    const backups = backupDir ? await listNumberedBackups(basename(configPath), backupDir) : [];
+    for (const backupPath of backups) {
+        const backupData = await tryParseJsonFile(backupPath);
+        if (backupData === null)
+            continue; // corrupt backup — try next
+        // Restore atomically: copy to a tmp then rename over the target
+        const restoreTmp = `${configPath}.restore-${process.pid}`;
+        try {
+            await copyFile(backupPath, restoreTmp);
+            await rename(restoreTmp, configPath);
+            await appendAuditLine(cwd, {
+                ts: new Date().toISOString(),
+                event: 'config-repair:restored-from-backup',
+                configPath,
+                restoredFrom: backupPath,
+                quarantinedTo: quarantinePath,
+                detail: `Corrupt config replaced by newest valid backup: ${basename(backupPath)}`,
+            });
+            return {
+                outcome: 'restored-from-backup',
+                configPath,
+                restoredFrom: backupPath,
+                quarantinedTo: quarantinePath,
+                detail: `Restored from backup: ${basename(backupPath)}`,
+            };
+        }
+        catch {
+            // Try next backup
+            try {
+                await import('node:fs/promises').then((m) => m.unlink(restoreTmp));
+            }
+            catch {
+                /* best-effort cleanup */
+            }
+        }
+    }
+    // ── 6. No valid candidate found — file is quarantined but not restored ────
+    await appendAuditLine(cwd, {
+        ts: new Date().toISOString(),
+        event: 'config-repair:quarantined-no-candidate',
+        configPath,
+        quarantinedTo: quarantinePath,
+        detail: 'Corrupt config quarantined; no valid backup found to restore from',
+    });
+    // Write an empty-object fallback so CLEO can start (caller may verify)
+    try {
+        const fallbackTmp = `${configPath}.fallback-${process.pid}`;
+        await writeFile(fallbackTmp, '{}\n', 'utf-8');
+        await rename(fallbackTmp, configPath);
+    }
+    catch {
+        // If even the empty-object write fails, leave the corrupt file in place
+        // and let the caller handle it
+    }
+    return {
+        outcome: 'quarantined-no-candidate',
+        configPath,
+        quarantinedTo: quarantinePath,
+        detail: 'No valid backup found; corrupt file quarantined and empty config written',
+    };
+}
+//# sourceMappingURL=config-repair.js.map

package/dist/config/config-repair.js.map

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package/dist/config/registry.js

@@ -21,10 +21,11 @@
  * @saga T9855
  * @adr 076
  */
-import { mkdir, readFile, writeFile } from 'node:fs/promises';
-import { dirname, join } from 'node:path';
+import { readFile } from 'node:fs/promises';
+import { join } from 'node:path';
 import { CLEO_CONFIG_MANIFEST, CONFIG_MANIFEST_ENTRIES, GLOBAL_CLEO_CONFIG_MANIFEST, PROJECT_CONTEXT_MANIFEST, PROJECT_INFO_MANIFEST, } from '@cleocode/contracts';
 import { getCleoHome } from '@cleocode/paths';
+import { atomicWriteJson } from '../store/atomic.js';
 // ───────────────────────────────────────────────────────────────────────────
 // Internal: path resolution + IO
 // ───────────────────────────────────────────────────────────────────────────
@@ -286,8 +287,7 @@ export async function unsetConfigValue(key, opts) {
     if (!removed) {
         return { key, scope, removed: false };
     }
-    await mkdir(dirname(configPath), { recursive: true });
-    await writeFile(configPath, `${JSON.stringify(existing, null, 2)}\n`, 'utf8');
+    await atomicWriteJson(configPath, existing);
     return { key, scope, removed: true };
 }
 /**

package/dist/config/registry.js.map

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@@ -1 +1 @@
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+{"version":3,"file":"config.d.ts","sourceRoot":"","sources":["../src/config.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAGH,OAAO,KAAK,EAAE,UAAU,EAAgB,aAAa,EAAE,MAAM,qBAAqB,CAAC;AA8NnF;;;;;;;GAOG;AACH,wBAAsB,UAAU,CAAC,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,CAAC,CAkClE;AAED;;;;;;;;GAQG;AACH,wBAAsB,cAAc,CAAC,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAgC7F;AAED;;;;;;;;GAQG;AACH,wBAAsB,iBAAiB,CAAC,GAAG,EAAE,MAAM,EAAE,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAQnF;AAED;;;;;;;;GAQG;AACH,wBAAsB,YAAY,CAAC,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,IAAI,CAAC,CAExF;AAED;;;;GAIG;AACH,wBAAgB,gBAAgB,CAAC,KAAK,EAAE,OAAO,GAAG,OAAO,CAYxD;AAED;;;;;;GAMG;AACH,wBAAsB,cAAc,CAClC,GAAG,EAAE,MAAM,EACX,KAAK,EAAE,OAAO,EACd,GAAG,CAAC,EAAE,MAAM,EACZ,IAAI,CAAC,EAAE;IAAE,MAAM,CAAC,EAAE,OAAO,CAAA;CAAE,GAC1B,OAAO,CAAC;IAAE,GAAG,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,OAAO,CAAC;IAAC,KAAK,EAAE,SAAS,GAAG,QAAQ,CAAA;CAAE,CAAC,CAiBvE;AAMD,0BAA0B;AAC1B,MAAM,MAAM,gBAAgB,GAAG,QAAQ,GAAG,UAAU,GAAG,SAAS,CAAC;AAEjE,4EAA4E;AAC5E,MAAM,WAAW,gBAAgB;IAC/B,kDAAkD;IAClD,WAAW,EAAE,MAAM,CAAC;IACpB,mEAAmE;IACnE,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CACjC;AAED;;;;;;GAMG;AACH,eAAO,MAAM,kBAAkB,EAAE,MAAM,CAAC,gBAAgB,EAAE,gBAAgB,CAiCzE,CAAC;AAEF,mCAAmC;AACnC,MAAM,WAAW,iBAAiB;IAChC,MAAM,EAAE,gBAAgB,CAAC;IACzB,WAAW,EAAE,MAAM,CAAC;IACpB,OAAO,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACjC,KAAK,EAAE,SAAS,GAAG,QAAQ,CAAC;CAC7B;AAED;;;;;;;GAOG;AACH,wBAAsB,qBAAqB,CACzC,MAAM,EAAE,gBAAgB,EACxB,GAAG,CAAC,EAAE,MAAM,EACZ,IAAI,CAAC,EAAE;IAAE,MAAM,CAAC,EAAE,OAAO,CAAA;CAAE,GAC1B,OAAO,CAAC,iBAAiB,CAAC,CAwB5B;AAED;;;;;GAKG;AACH,wBAAgB,qBAAqB,IAAI,KAAK,CAAC;IAC7C,IAAI,EAAE,gBAAgB,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;IACpB,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CACjC,CAAC,CAQD"}

package/dist/config.js

@@ -8,13 +8,12 @@
  * @task T067
  */
 import { existsSync } from 'node:fs';
-import { mkdir, writeFile } from 'node:fs/promises';
-import { dirname } from 'node:path';
 // Import from the dependency-free leaf (NOT ./llm/role-resolver.js) so this
 // module's eager DEFAULTS read cannot enter role-resolver's circular import
 // chain and hit a temporal-dead-zone ReferenceError. See llm/fallback-model.ts.
 import { IMPLICIT_FALLBACK_MODEL } from './llm/fallback-model.js';
 import { getConfigPath, getGlobalConfigPath } from './paths.js';
+import { atomicWriteJson } from './store/atomic.js';
 import { readJson, saveJson } from './store/json.js';
 /** Default configuration values. */
 const DEFAULTS = {
@@ -126,6 +125,12 @@ const DEFAULTS = {
     leadRollup: {
         mode: 'passive',
     },
+    // T11984: daemon lifecycle — postinstall respects operator state by default.
+    // Set daemon.autoStart = false (via global config.json) for a persistent
+    // opt-out that survives npm upgrades.
+    daemon: {
+        autoStart: true,
+    },
 };
 /** Environment variable to config path mapping. */
 const ENV_MAP = {
@@ -352,11 +357,9 @@ export function parseConfigValue(value) {
  */
 export async function setConfigValue(key, value, cwd, opts) {
     const configPath = opts?.global ? getGlobalConfigPath() : getConfigPath(cwd);
-    // Ensure file exists
+    // Ensure file exists atomically (crash-safe bootstrap, T11997)
     if (!existsSync(configPath)) {
-        const dir = dirname(configPath);
-        await mkdir(dir, { recursive: true });
-        await writeFile(configPath, '{}', 'utf-8');
+        await atomicWriteJson(configPath, {});
     }
     const config = (await readJson(configPath)) ?? {};
     const parsedValue = parseConfigValue(value);
@@ -414,11 +417,9 @@ export const STRICTNESS_PRESETS = {
 export async function applyStrictnessPreset(preset, cwd, opts) {
     const definition = STRICTNESS_PRESETS[preset];
     const configPath = opts?.global ? getGlobalConfigPath() : getConfigPath(cwd);
-    // Ensure config file exists
+    // Ensure config file exists atomically (crash-safe bootstrap, T11997)
     if (!existsSync(configPath)) {
-        const dir = dirname(configPath);
-        await mkdir(dir, { recursive: true });
-        await writeFile(configPath, '{}', 'utf-8');
+        await atomicWriteJson(configPath, {});
     }
     const config = (await readJson(configPath)) ?? {};
     // Apply each preset key via dot-notation setter