@cleocode/core 2026.5.134 → 2026.6.1

package/dist/store/memory-sqlite.js.map

@@ -1 +1 @@
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package/dist/store/migrate-signaldock-to-conduit.d.ts

@@ -77,5 +77,5 @@ export declare function needsSignaldockToConduitMigration(projectRoot: string):
  * @task T358
  * @epic T310
  */
-export declare function migrateSignaldockToConduit(projectRoot: string): MigrationResult;
+export declare function migrateSignaldockToConduit(projectRoot: string): Promise<MigrationResult>;
 //# sourceMappingURL=migrate-signaldock-to-conduit.d.ts.map

package/dist/store/migrate-signaldock-to-conduit.d.ts.map

@@ -1 +1 @@
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package/dist/store/migrate-signaldock-to-conduit.js

@@ -25,26 +25,41 @@ import { createRequire } from 'node:module';
 import { join } from 'node:path';
 import { getLogger } from '../logger.js';
 import { getCleoHome } from '../paths.js';
-import { ensureConduitDb } from './conduit-sqlite.js';
+import { ensureGlobalAgentRegistryDb } from './agent-registry-store.js';
+import { ensureConduitDb, getConduitDbPath } from './conduit-sqlite.js';
 import { getGlobalSalt } from './global-salt.js';
-import { ensureGlobalSignaldockDb } from './signaldock-sqlite.js';
 import { applyPerfPragmas } from './sqlite-pragmas.js';
 const _require = createRequire(import.meta.url);
 const { DatabaseSync } = _require('node:sqlite');
 // ---------------------------------------------------------------------------
 // Constants
 // ---------------------------------------------------------------------------
-/** Project-local tables to copy verbatim from legacy signaldock.db to conduit.db. */
+/**
+ * Project-local tables to copy from the legacy `signaldock.db` to the conduit DB.
+ *
+ * Each entry is a `{ src, dest }` pair. For most tables `src === dest`. The
+ * attachment-family tables differ: the legacy `signaldock.db` stored them under
+ * the BARE names (`attachments`, `attachment_versions`, …), but the consolidated
+ * conduit forward migration now creates them under the `conduit_`-prefixed names
+ * (T11563 — disjoint from the docs-domain bare `attachments` table that also
+ * lives in the consolidated `cleo.db`). The copy must therefore map the legacy
+ * source name to the prefixed destination name, otherwise rows would be inserted
+ * into the unrelated docs `attachments` table.
+ */
+// T11578 (AC4): destinations are the PREFIXED consolidated `conduit_*` tables —
+// the conduit runtime no longer materializes the BARE legacy tables. Copying
+// from the legacy bare source into these prefixed targets is epoch-→-ISO coerced
+// by copyTableRows for any target column carrying an ISO-8601 GLOB CHECK.
 const PROJECT_TIER_TABLES = [
-    'messages',
-    'conversations',
-    'delivery_jobs',
-    'dead_letters',
-    'message_pins',
-    'attachments',
-    'attachment_versions',
-    'attachment_approvals',
-    'attachment_contributors',
+    { src: 'messages', dest: 'conduit_messages' },
+    { src: 'conversations', dest: 'conduit_conversations' },
+    { src: 'delivery_jobs', dest: 'conduit_delivery_jobs' },
+    { src: 'dead_letters', dest: 'conduit_dead_letters' },
+    { src: 'message_pins', dest: 'conduit_message_pins' },
+    { src: 'attachments', dest: 'conduit_attachments' },
+    { src: 'attachment_versions', dest: 'conduit_attachment_versions' },
+    { src: 'attachment_approvals', dest: 'conduit_attachment_approvals' },
+    { src: 'attachment_contributors', dest: 'conduit_attachment_contributors' },
 ];
 /** Global-identity tables to copy using INSERT OR IGNORE from legacy to global signaldock.db. */
 const GLOBAL_IDENTITY_TABLES = [
@@ -81,7 +96,12 @@ const GLOBAL_IDENTITY_TABLES = [
  */
 export function needsSignaldockToConduitMigration(projectRoot) {
     const legacyPath = join(projectRoot, '.cleo', 'signaldock.db');
-    const conduitPath = join(projectRoot, '.cleo', 'conduit.db');
+    // E6-L3 (T11523): the conduit domain consolidated into the project `cleo.db`.
+    // Probe the consolidated DB path (via getConduitDbPath) rather than the literal
+    // legacy `conduit.db` — otherwise this one-shot legacy migration would believe
+    // it is perpetually un-run on any post-consolidation project (`conduit.db` is
+    // never created) and re-fire on every CLI startup.
+    const conduitPath = getConduitDbPath(projectRoot);
     return existsSync(legacyPath) && !existsSync(conduitPath);
 }
 // ---------------------------------------------------------------------------
@@ -112,28 +132,39 @@ function getTableColumns(db, tableName) {
     return rows.map((r) => r.name);
 }
 /**
- * Copy all rows from `tableName` in `srcDb` to the same table in `destDb`.
+ * Copy all rows from `srcTableName` in `srcDb` to `destTableName` in `destDb`.
  * Only columns that exist in both source and destination are copied (schema safety).
  * Uses INSERT OR IGNORE to handle unique constraint conflicts gracefully.
  *
+ * Source and destination table names may differ (T11563): the conduit
+ * attachment-family tables were renamed to `conduit_`-prefixed names in the
+ * consolidated `cleo.db`, while the legacy `signaldock.db` source still uses the
+ * bare names.
+ *
  * @param srcDb - Source database (legacy signaldock.db).
  * @param destDb - Destination database (conduit.db or global signaldock.db).
- * @param tableName - Table to copy.
+ * @param srcTableName - Table to read rows from in `srcDb`.
+ * @param destTableName - Table to write rows into in `destDb`. Defaults to `srcTableName`.
  * @param ignoreConflicts - When true uses INSERT OR IGNORE; when false uses INSERT.
  * @returns Number of rows found in source (not necessarily inserted — some may have been ignored).
  */
-function copyTableRows(srcDb, destDb, tableName, ignoreConflicts = false) {
-    const srcCols = getTableColumns(srcDb, tableName);
-    const destCols = getTableColumns(destDb, tableName);
+function copyTableRows(srcDb, destDb, srcTableName, destTableName = srcTableName, ignoreConflicts = false) {
+    const srcCols = getTableColumns(srcDb, srcTableName);
+    const destCols = getTableColumns(destDb, destTableName);
     // Only copy columns that exist in both tables
     const cols = srcCols.filter((c) => destCols.includes(c));
     if (cols.length === 0)
         return 0;
+    // T11578 (AC4): the prefixed `conduit_*` targets carry ISO-8601 TEXT timestamp
+    // columns with an ISO GLOB CHECK, while the legacy bare source stored epoch
+    // SECONDS integers. Coerce those columns to ISO so the verbatim row copy does
+    // not fail (or, under INSERT OR IGNORE, silently drop) on the GLOB CHECK.
+    const isoGlobCols = detectIsoGlobColumns(destDb, destTableName);
     const colList = cols.map((c) => `"${c}"`).join(', ');
     const placeholders = cols.map(() => '?').join(', ');
     const conflictClause = ignoreConflicts ? 'OR IGNORE' : '';
-    const insertSql = `INSERT ${conflictClause} INTO "${tableName}" (${colList}) VALUES (${placeholders})`;
-    const rows = srcDb.prepare(`SELECT ${colList} FROM "${tableName}"`).all();
+    const insertSql = `INSERT ${conflictClause} INTO "${destTableName}" (${colList}) VALUES (${placeholders})`;
+    const rows = srcDb.prepare(`SELECT ${colList} FROM "${srcTableName}"`).all();
     if (rows.length === 0)
         return 0;
     const stmt = destDb.prepare(insertSql);
@@ -141,11 +172,67 @@ function copyTableRows(srcDb, destDb, tableName, ignoreConflicts = false) {
         // Values originate from another SQLite row via prepare().all(), so at runtime
         // they are already SQLInputValue-compatible (string | number | bigint | Uint8Array | null).
         // The surrounding `Record<string, unknown>` type erases this, hence the narrow cast.
-        const values = cols.map((c) => (row[c] ?? null));
+        const values = cols.map((c) => {
+            const raw = row[c] ?? null;
+            if (isoGlobCols.has(c) && typeof raw === 'number') {
+                return epochSecondsToIso(raw);
+            }
+            return (raw ?? null);
+        });
         stmt.run(...values);
     }
     return rows.length;
 }
+/**
+ * Regex matching the T11363-generated ISO-8601 GLOB CHECK constraint, e.g.
+ * `CHECK ("created_at" IS NULL OR "created_at" GLOB '[0-9][0-9][0-9][0-9]-...')`.
+ *
+ * The constrained column name appears twice; we capture the first occurrence.
+ *
+ * @task T11578
+ */
+const ISO_GLOB_CHECK_REGEX = /CHECK\s*\(\s*"([^"]+)"\s+IS\s+NULL\s+OR\s+"[^"]+"\s+GLOB\s+'\[0-9/gi;
+/**
+ * Read a target table's DDL from `sqlite_master` and return the set of column
+ * names that carry an ISO-8601 GLOB CHECK constraint (the consolidated
+ * `conduit_*` timestamp columns introduced by T11363).
+ *
+ * @param db        - The destination DB handle (consolidated `cleo.db`).
+ * @param tableName - Physical destination table name (e.g. `conduit_messages`).
+ * @returns Set of column names requiring ISO-8601 TEXT values.
+ * @task T11578
+ */
+function detectIsoGlobColumns(db, tableName) {
+    const escaped = tableName.replace(/'/g, "''");
+    const row = db
+        .prepare(`SELECT sql FROM sqlite_master WHERE type='table' AND name='${escaped}'`)
+        .get();
+    const out = new Set();
+    if (!row?.sql)
+        return out;
+    ISO_GLOB_CHECK_REGEX.lastIndex = 0; // global regex is stateful — reset before reuse
+    for (const match of row.sql.matchAll(ISO_GLOB_CHECK_REGEX)) {
+        const col = match[1];
+        if (col)
+            out.add(col);
+    }
+    return out;
+}
+/**
+ * Convert a legacy epoch-SECONDS integer to a canonical ISO-8601 UTC string.
+ *
+ * The legacy conduit writers stored timestamps as `Math.floor(Date.now() / 1000)`
+ * (§8.1 — seconds, never milliseconds), so this multiplies by 1000 before
+ * constructing the `Date`. Used by {@link copyTableRows} to satisfy the ISO GLOB
+ * CHECK on the prefixed `conduit_*` targets (T11578 · AC4).
+ *
+ * @param epochSeconds - Epoch seconds value from a legacy bare conduit row.
+ * @returns ISO-8601 UTC timestamp string.
+ * @task T11578
+ */
+function epochSecondsToIso(epochSeconds) {
+    return new Date(epochSeconds * 1000).toISOString();
+}
 /**
  * Run PRAGMA integrity_check on `db` and return true if it passes.
  *
@@ -187,10 +274,12 @@ function brokenTimestamp() {
  * @task T358
  * @epic T310
  */
-export function migrateSignaldockToConduit(projectRoot) {
+export async function migrateSignaldockToConduit(projectRoot) {
     const log = getLogger('migrate-signaldock-to-conduit');
     const legacyPath = join(projectRoot, '.cleo', 'signaldock.db');
-    const conduitPath = join(projectRoot, '.cleo', 'conduit.db');
+    // E6-L3 (T11523): the conduit domain now lives in the consolidated project
+    // `cleo.db`. Report that path as the migration target.
+    const conduitPath = getConduitDbPath(projectRoot);
     const globalSignaldockPath = join(getCleoHome(), 'signaldock.db');
     const bakPath = `${legacyPath}.pre-t310.bak`;
     const result = {
@@ -261,7 +350,7 @@ export function migrateSignaldockToConduit(projectRoot) {
         // and rely on the schema already having been applied (or apply it inline).
         // We call ensureGlobalSignaldockDb() in a fire-and-forget style here, and
         // handle the open synchronously below with DatabaseSync.
-        void ensureGlobalSignaldockDb();
+        void ensureGlobalAgentRegistryDb();
     }
     catch {
         // Non-fatal: the global DB open below will create the file if needed.
@@ -285,7 +374,7 @@ export function migrateSignaldockToConduit(projectRoot) {
     // -----------------------------------------------------------------------
     let conduit = null;
     try {
-        const ensureResult = ensureConduitDb(projectRoot);
+        const ensureResult = await ensureConduitDb(projectRoot);
         // Open a direct handle for migration writes (ensureConduitDb returns singleton;
         // we open a fresh handle to avoid interfering with any singleton state).
         conduit = new DatabaseSync(ensureResult.path);
@@ -310,16 +399,17 @@ export function migrateSignaldockToConduit(projectRoot) {
     // -----------------------------------------------------------------------
     try {
         conduit.exec('BEGIN TRANSACTION');
-        // Copy project-local messaging tables verbatim
-        for (const tableName of PROJECT_TIER_TABLES) {
-            if (tableExistsInDb(legacy, tableName) && tableExistsInDb(conduit, tableName)) {
-                copyTableRows(legacy, conduit, tableName, false);
+        // Copy project-local messaging tables verbatim. Source/destination names may
+        // differ for the conduit attachment-family tables (T11563).
+        for (const { src, dest } of PROJECT_TIER_TABLES) {
+            if (tableExistsInDb(legacy, src) && tableExistsInDb(conduit, dest)) {
+                copyTableRows(legacy, conduit, src, dest, false);
             }
         }
-        // Rebuild FTS after message copy
-        if (tableExistsInDb(conduit, 'messages_fts')) {
+        // Rebuild FTS after message copy (T11578 · AC4: prefixed FTS index).
+        if (tableExistsInDb(conduit, 'conduit_messages_fts')) {
             try {
-                conduit.exec("INSERT INTO messages_fts(messages_fts) VALUES('rebuild')");
+                conduit.exec("INSERT INTO conduit_messages_fts(conduit_messages_fts) VALUES('rebuild')");
             }
             catch {
                 // FTS rebuild failure is non-fatal — the triggers will populate it over time
@@ -345,7 +435,7 @@ export function migrateSignaldockToConduit(projectRoot) {
                 const lastUsedAtRaw = hasLastUsedAtCol ? agent['last_used_at'] : null;
                 const lastUsedAt = lastUsedAtRaw != null ? new Date(lastUsedAtRaw * 1000).toISOString() : null;
                 conduit
-                    .prepare(`INSERT OR IGNORE INTO project_agent_refs
+                    .prepare(`INSERT OR IGNORE INTO conduit_project_agent_refs
                (agent_id, attached_at, role, capabilities_override, last_used_at, enabled)
              VALUES (?, ?, ?, NULL, ?, 1)`)
                     .run(agentId, attachedAt, role, lastUsedAt);
@@ -444,10 +534,11 @@ export function migrateSignaldockToConduit(projectRoot) {
     let agentsCopiedToGlobal = 0;
     try {
         globalDb.exec('BEGIN TRANSACTION');
-        // Copy all global-identity tables using INSERT OR IGNORE
+        // Copy all global-identity tables using INSERT OR IGNORE. Source and
+        // destination share the same name for this tier.
         for (const tableName of GLOBAL_IDENTITY_TABLES) {
             if (tableExistsInDb(legacy, tableName) && tableExistsInDb(globalDb, tableName)) {
-                copyTableRows(legacy, globalDb, tableName, true /* ignoreConflicts */);
+                copyTableRows(legacy, globalDb, tableName, tableName, true /* ignoreConflicts */);
             }
         }
         // Count agents actually in legacy

package/dist/store/migrate-signaldock-to-conduit.js.map

@@ -1 +1 @@
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package/dist/store/migration-manager.d.ts

@@ -61,6 +61,55 @@ export declare function createSafetyBackup(dbPath: string): void;
  * @param logSubsystem - Logger subsystem name for reconciliation warnings
  */
 export declare function reconcileJournal(nativeDb: DatabaseSync, migrationsFolder: string, existenceTable: string, logSubsystem: string): void;
+/**
+ * Reconcile + apply the standalone `drizzle-brain` migrations against a CONSOLIDATED
+ * `cleo.db` whose prefixed `brain_*` tables were already created by the
+ * consolidated migration (T11647). For each not-yet-journaled `drizzle-brain`
+ * migration, this either:
+ *
+ *  1. **Marks it applied without running** when its net effect is ALREADY present:
+ *     every `CREATE TABLE` / `RENAME TO` result table exists, OR it is an
+ *     ALTER-ADD-COLUMN-only migration whose columns all already exist (the
+ *     consolidated migration created the prefixed tables with their FINAL
+ *     columns). This avoids the `CREATE TABLE`/rename collisions and
+ *     "duplicate column" errors a wholesale re-run would hit.
+ *  2. **Executes it directly** (native `exec`, then journals it) when it is
+ *     genuinely missing — the UNPREFIXED legacy runtime tables (`deriver_queue`,
+ *     `sticky_tags`, `session_narrative`, `brain_task_observations`) the
+ *     consolidated migration omits but the runtime queries. Those migrations are
+ *     all `IF NOT EXISTS` DDL + idempotent `INSERT OR IGNORE` backfills, so a
+ *     direct exec is safe.
+ *
+ * ## Why NOT {@link reconcileJournal} + drizzle `migrate()`
+ *
+ * The brain `__drizzle_migrations` journal is SHARED with the TASKS domain inside
+ * the same consolidated `cleo.db`. On a first consolidated open the brain hashes
+ * are not yet journaled, so `reconcileJournal`'s Scenario-2 path classifies the
+ * TASKS-domain hashes as "orphans" of the brain migration set and DELETES them —
+ * which forces the tasks domain to re-run its table-rebuild migrations on the
+ * NEXT tasks open and crash (`tasks_new RENAME TO tasks` fires the
+ * `task_relations_non_containment_insert` trigger against a mid-rebuild `tasks`).
+ * And drizzle's `migrate()` wraps the brain DDL in a `BEGIN`/`COMMIT` over the
+ * shared handle. This function is **additive-only** (it never deletes a journal
+ * row) and uses plain `nativeDb.exec()`, so it cannot corrupt the shared journal
+ * or engage the cross-domain transaction.
+ *
+ * Idempotent: dedups by hash (the journal has no UNIQUE on `hash`, so an explicit
+ * presence check is required). On a brand-new / standalone `brain.db` (no
+ * prefixed brain tables yet) every migration is "genuinely missing" and is
+ * executed in order — equivalent to a full migrate.
+ *
+ * @param nativeDb - Native SQLite handle (the consolidated `cleo.db`).
+ * @param migrationsFolder - The `drizzle-brain` migrations folder.
+ * @returns `{ marked, applied }` — counts of migrations journaled-without-running
+ *   vs executed-and-journaled.
+ *
+ * @task T11647
+ */
+export declare function reconcileBrainMigrationsForConsolidatedDb(nativeDb: DatabaseSync, migrationsFolder: string): {
+    marked: number;
+    applied: number;
+};
 /**
  * Check whether an error is a SQLite "duplicate column name" error.
  *

package/dist/store/migration-manager.d.ts.map

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