@cleocode/core 2026.4.9 → 2026.4.12

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1011) hide show
  1. package/dist/adapters/adapter-registry.js +64 -0
  2. package/dist/adapters/adapter-registry.js.map +1 -0
  3. package/dist/adapters/discovery.js +83 -0
  4. package/dist/adapters/discovery.js.map +1 -0
  5. package/dist/adapters/index.js +9 -0
  6. package/dist/adapters/index.js.map +1 -0
  7. package/dist/adapters/manager.js +260 -0
  8. package/dist/adapters/manager.js.map +1 -0
  9. package/dist/admin/export-tasks.js +171 -0
  10. package/dist/admin/export-tasks.js.map +1 -0
  11. package/dist/admin/export.js +103 -0
  12. package/dist/admin/export.js.map +1 -0
  13. package/dist/admin/help.js +106 -0
  14. package/dist/admin/help.js.map +1 -0
  15. package/dist/admin/import-tasks.js +182 -0
  16. package/dist/admin/import-tasks.js.map +1 -0
  17. package/dist/admin/import.js +129 -0
  18. package/dist/admin/import.js.map +1 -0
  19. package/dist/admin/index.js +13 -0
  20. package/dist/admin/index.js.map +1 -0
  21. package/dist/adrs/find.js +134 -0
  22. package/dist/adrs/find.js.map +1 -0
  23. package/dist/adrs/index.js +15 -0
  24. package/dist/adrs/index.js.map +1 -0
  25. package/dist/adrs/link-pipeline.js +160 -0
  26. package/dist/adrs/link-pipeline.js.map +1 -0
  27. package/dist/adrs/list.js +43 -0
  28. package/dist/adrs/list.js.map +1 -0
  29. package/dist/adrs/parse.js +51 -0
  30. package/dist/adrs/parse.js.map +1 -0
  31. package/dist/adrs/show.js +22 -0
  32. package/dist/adrs/show.js.map +1 -0
  33. package/dist/adrs/sync.js +188 -0
  34. package/dist/adrs/sync.js.map +1 -0
  35. package/dist/adrs/types.js +9 -0
  36. package/dist/adrs/types.js.map +1 -0
  37. package/dist/adrs/validate.js +57 -0
  38. package/dist/adrs/validate.js.map +1 -0
  39. package/dist/agents/agent-registry.js +288 -0
  40. package/dist/agents/agent-registry.js.map +1 -0
  41. package/dist/agents/agent-schema.d.ts +2 -2
  42. package/dist/agents/agent-schema.js +82 -0
  43. package/dist/agents/agent-schema.js.map +1 -0
  44. package/dist/agents/capacity.js +116 -0
  45. package/dist/agents/capacity.js.map +1 -0
  46. package/dist/agents/execution-learning.js +474 -0
  47. package/dist/agents/execution-learning.js.map +1 -0
  48. package/dist/agents/health-monitor.js +217 -0
  49. package/dist/agents/health-monitor.js.map +1 -0
  50. package/dist/agents/index.js +29 -0
  51. package/dist/agents/index.js.map +1 -0
  52. package/dist/agents/registry.js +314 -0
  53. package/dist/agents/registry.js.map +1 -0
  54. package/dist/agents/retry.js +215 -0
  55. package/dist/agents/retry.js.map +1 -0
  56. package/dist/audit-prune.js +94 -0
  57. package/dist/audit-prune.js.map +1 -0
  58. package/dist/audit.js +68 -0
  59. package/dist/audit.js.map +1 -0
  60. package/dist/backfill/index.js +229 -0
  61. package/dist/backfill/index.js.map +1 -0
  62. package/dist/bootstrap.js +344 -0
  63. package/dist/bootstrap.js.map +1 -0
  64. package/dist/caamp/adapter.js +259 -0
  65. package/dist/caamp/adapter.js.map +1 -0
  66. package/dist/caamp/capability-check.js +38 -0
  67. package/dist/caamp/capability-check.js.map +1 -0
  68. package/dist/caamp/index.js +21 -0
  69. package/dist/caamp/index.js.map +1 -0
  70. package/dist/caamp-init.js +16 -0
  71. package/dist/caamp-init.js.map +1 -0
  72. package/dist/cleo.js +322 -0
  73. package/dist/cleo.js.map +1 -0
  74. package/dist/code/index.js +10 -0
  75. package/dist/code/index.js.map +1 -0
  76. package/dist/code/outline.js +165 -0
  77. package/dist/code/outline.js.map +1 -0
  78. package/dist/code/parser.js +295 -0
  79. package/dist/code/parser.js.map +1 -0
  80. package/dist/code/search.js +135 -0
  81. package/dist/code/search.js.map +1 -0
  82. package/dist/code/unfold.js +155 -0
  83. package/dist/code/unfold.js.map +1 -0
  84. package/dist/codebase-map/analyzers/architecture.d.ts.map +1 -1
  85. package/dist/codebase-map/analyzers/architecture.js +129 -0
  86. package/dist/codebase-map/analyzers/architecture.js.map +1 -0
  87. package/dist/codebase-map/analyzers/concerns.js +122 -0
  88. package/dist/codebase-map/analyzers/concerns.js.map +1 -0
  89. package/dist/codebase-map/analyzers/conventions.js +149 -0
  90. package/dist/codebase-map/analyzers/conventions.js.map +1 -0
  91. package/dist/codebase-map/analyzers/integrations.js +108 -0
  92. package/dist/codebase-map/analyzers/integrations.js.map +1 -0
  93. package/dist/codebase-map/analyzers/stack.js +117 -0
  94. package/dist/codebase-map/analyzers/stack.js.map +1 -0
  95. package/dist/codebase-map/analyzers/structure.js +137 -0
  96. package/dist/codebase-map/analyzers/structure.js.map +1 -0
  97. package/dist/codebase-map/analyzers/testing.js +118 -0
  98. package/dist/codebase-map/analyzers/testing.js.map +1 -0
  99. package/dist/codebase-map/index.js +57 -0
  100. package/dist/codebase-map/index.js.map +1 -0
  101. package/dist/codebase-map/store.js +122 -0
  102. package/dist/codebase-map/store.js.map +1 -0
  103. package/dist/codebase-map/summary.js +152 -0
  104. package/dist/codebase-map/summary.js.map +1 -0
  105. package/dist/compliance/index.js +288 -0
  106. package/dist/compliance/index.js.map +1 -0
  107. package/dist/compliance/protocol-enforcement.js +332 -0
  108. package/dist/compliance/protocol-enforcement.js.map +1 -0
  109. package/dist/compliance/protocol-rules.js +786 -0
  110. package/dist/compliance/protocol-rules.js.map +1 -0
  111. package/dist/compliance/protocol-types.js +79 -0
  112. package/dist/compliance/protocol-types.js.map +1 -0
  113. package/dist/compliance/store.js +53 -0
  114. package/dist/compliance/store.js.map +1 -0
  115. package/dist/conduit/conduit-client.js +107 -0
  116. package/dist/conduit/conduit-client.js.map +1 -0
  117. package/dist/conduit/factory.js +52 -0
  118. package/dist/conduit/factory.js.map +1 -0
  119. package/dist/conduit/http-transport.js +155 -0
  120. package/dist/conduit/http-transport.js.map +1 -0
  121. package/dist/conduit/index.js +15 -0
  122. package/dist/conduit/index.js.map +1 -0
  123. package/dist/conduit/local-transport.d.ts +18 -8
  124. package/dist/conduit/local-transport.d.ts.map +1 -1
  125. package/dist/conduit/local-transport.js +255 -0
  126. package/dist/conduit/local-transport.js.map +1 -0
  127. package/dist/conduit/sse-transport.js +299 -0
  128. package/dist/conduit/sse-transport.js.map +1 -0
  129. package/dist/config/build-config.js +29 -0
  130. package/dist/config/build-config.js.map +1 -0
  131. package/dist/config.d.ts.map +1 -1
  132. package/dist/config.js +400 -0
  133. package/dist/config.js.map +1 -0
  134. package/dist/constants.js +18 -0
  135. package/dist/constants.js.map +1 -0
  136. package/dist/context/index.js +137 -0
  137. package/dist/context/index.js.map +1 -0
  138. package/dist/crypto/credentials.js +191 -0
  139. package/dist/crypto/credentials.js.map +1 -0
  140. package/dist/discovery.js +182 -0
  141. package/dist/discovery.js.map +1 -0
  142. package/dist/engine-result.js +12 -0
  143. package/dist/engine-result.js.map +1 -0
  144. package/dist/error-catalog.js +404 -0
  145. package/dist/error-catalog.js.map +1 -0
  146. package/dist/error-registry.js +393 -0
  147. package/dist/error-registry.js.map +1 -0
  148. package/dist/errors.d.ts +19 -0
  149. package/dist/errors.d.ts.map +1 -1
  150. package/dist/errors.js +173 -0
  151. package/dist/errors.js.map +1 -0
  152. package/dist/hooks/handlers/agent-hooks.js +106 -0
  153. package/dist/hooks/handlers/agent-hooks.js.map +1 -0
  154. package/dist/hooks/handlers/context-hooks.js +111 -0
  155. package/dist/hooks/handlers/context-hooks.js.map +1 -0
  156. package/dist/hooks/handlers/error-hooks.js +52 -0
  157. package/dist/hooks/handlers/error-hooks.js.map +1 -0
  158. package/dist/hooks/handlers/file-hooks.js +104 -0
  159. package/dist/hooks/handlers/file-hooks.js.map +1 -0
  160. package/dist/hooks/handlers/handler-helpers.js +61 -0
  161. package/dist/hooks/handlers/handler-helpers.js.map +1 -0
  162. package/dist/hooks/handlers/index.js +28 -0
  163. package/dist/hooks/handlers/index.js.map +1 -0
  164. package/dist/hooks/handlers/memory-bridge-refresh.js +42 -0
  165. package/dist/hooks/handlers/memory-bridge-refresh.js.map +1 -0
  166. package/dist/hooks/handlers/notification-hooks.js +62 -0
  167. package/dist/hooks/handlers/notification-hooks.js.map +1 -0
  168. package/dist/hooks/handlers/session-hooks.d.ts +21 -0
  169. package/dist/hooks/handlers/session-hooks.d.ts.map +1 -1
  170. package/dist/hooks/handlers/session-hooks.js +142 -0
  171. package/dist/hooks/handlers/session-hooks.js.map +1 -0
  172. package/dist/hooks/handlers/task-hooks.js +65 -0
  173. package/dist/hooks/handlers/task-hooks.js.map +1 -0
  174. package/dist/hooks/handlers/work-capture-hooks.js +165 -0
  175. package/dist/hooks/handlers/work-capture-hooks.js.map +1 -0
  176. package/dist/hooks/index.js +13 -0
  177. package/dist/hooks/index.js.map +1 -0
  178. package/dist/hooks/payload-schemas.d.ts +2 -2
  179. package/dist/hooks/payload-schemas.js +220 -0
  180. package/dist/hooks/payload-schemas.js.map +1 -0
  181. package/dist/hooks/provider-hooks.js +66 -0
  182. package/dist/hooks/provider-hooks.js.map +1 -0
  183. package/dist/hooks/registry.js +229 -0
  184. package/dist/hooks/registry.js.map +1 -0
  185. package/dist/hooks/types.js +66 -0
  186. package/dist/hooks/types.js.map +1 -0
  187. package/dist/hooks.js +136 -0
  188. package/dist/hooks.js.map +1 -0
  189. package/dist/index.js +175 -68684
  190. package/dist/index.js.map +1 -7
  191. package/dist/init.d.ts +1 -2
  192. package/dist/init.d.ts.map +1 -1
  193. package/dist/init.js +851 -0
  194. package/dist/init.js.map +1 -0
  195. package/dist/inject/index.js +82 -0
  196. package/dist/inject/index.js.map +1 -0
  197. package/dist/injection.js +343 -0
  198. package/dist/injection.js.map +1 -0
  199. package/dist/intelligence/adaptive-validation.js +497 -0
  200. package/dist/intelligence/adaptive-validation.js.map +1 -0
  201. package/dist/intelligence/impact.js +675 -0
  202. package/dist/intelligence/impact.js.map +1 -0
  203. package/dist/intelligence/index.js +22 -0
  204. package/dist/intelligence/index.js.map +1 -0
  205. package/dist/intelligence/patterns.js +492 -0
  206. package/dist/intelligence/patterns.js.map +1 -0
  207. package/dist/intelligence/prediction.js +499 -0
  208. package/dist/intelligence/prediction.js.map +1 -0
  209. package/dist/intelligence/types.js +13 -0
  210. package/dist/intelligence/types.js.map +1 -0
  211. package/dist/internal.d.ts +15 -5
  212. package/dist/internal.d.ts.map +1 -1
  213. package/dist/internal.js +306 -0
  214. package/dist/internal.js.map +1 -0
  215. package/dist/issue/create.js +121 -0
  216. package/dist/issue/create.js.map +1 -0
  217. package/dist/issue/diagnostics.js +59 -0
  218. package/dist/issue/diagnostics.js.map +1 -0
  219. package/dist/issue/index.js +10 -0
  220. package/dist/issue/index.js.map +1 -0
  221. package/dist/issue/template-parser.js +267 -0
  222. package/dist/issue/template-parser.js.map +1 -0
  223. package/dist/json-schema-validator.js +76 -0
  224. package/dist/json-schema-validator.js.map +1 -0
  225. package/dist/lib/index.js +11 -0
  226. package/dist/lib/index.js.map +1 -0
  227. package/dist/lib/retry.js +152 -0
  228. package/dist/lib/retry.js.map +1 -0
  229. package/dist/lib/tree-sitter-languages.js +71 -0
  230. package/dist/lib/tree-sitter-languages.js.map +1 -0
  231. package/dist/lifecycle/chain-composition.js +152 -0
  232. package/dist/lifecycle/chain-composition.js.map +1 -0
  233. package/dist/lifecycle/chain-store.js +246 -0
  234. package/dist/lifecycle/chain-store.js.map +1 -0
  235. package/dist/lifecycle/consolidate-rcasd.js +352 -0
  236. package/dist/lifecycle/consolidate-rcasd.js.map +1 -0
  237. package/dist/lifecycle/default-chain.js +176 -0
  238. package/dist/lifecycle/default-chain.js.map +1 -0
  239. package/dist/lifecycle/evidence.js +180 -0
  240. package/dist/lifecycle/evidence.js.map +1 -0
  241. package/dist/lifecycle/frontmatter.js +363 -0
  242. package/dist/lifecycle/frontmatter.js.map +1 -0
  243. package/dist/lifecycle/index.js +756 -0
  244. package/dist/lifecycle/index.js.map +1 -0
  245. package/dist/lifecycle/pipeline.js +656 -0
  246. package/dist/lifecycle/pipeline.js.map +1 -0
  247. package/dist/lifecycle/rcasd-index.js +326 -0
  248. package/dist/lifecycle/rcasd-index.js.map +1 -0
  249. package/dist/lifecycle/rcasd-paths.js +220 -0
  250. package/dist/lifecycle/rcasd-paths.js.map +1 -0
  251. package/dist/lifecycle/resume.js +864 -0
  252. package/dist/lifecycle/resume.js.map +1 -0
  253. package/dist/lifecycle/stage-artifacts.js +94 -0
  254. package/dist/lifecycle/stage-artifacts.js.map +1 -0
  255. package/dist/lifecycle/stage-guidance.js +234 -0
  256. package/dist/lifecycle/stage-guidance.js.map +1 -0
  257. package/dist/lifecycle/stages.js +534 -0
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  259. package/dist/lifecycle/state-machine.js +516 -0
  260. package/dist/lifecycle/state-machine.js.map +1 -0
  261. package/dist/lifecycle/tessera-engine.js +249 -0
  262. package/dist/lifecycle/tessera-engine.js.map +1 -0
  263. package/dist/logger.js +140 -0
  264. package/dist/logger.js.map +1 -0
  265. package/dist/memory/auto-extract.js +177 -0
  266. package/dist/memory/auto-extract.js.map +1 -0
  267. package/dist/memory/brain-embedding.js +66 -0
  268. package/dist/memory/brain-embedding.js.map +1 -0
  269. package/dist/memory/brain-lifecycle.js +298 -0
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  271. package/dist/memory/brain-links.js +161 -0
  272. package/dist/memory/brain-links.js.map +1 -0
  273. package/dist/memory/brain-maintenance.js +114 -0
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  275. package/dist/memory/brain-migration.js +149 -0
  276. package/dist/memory/brain-migration.js.map +1 -0
  277. package/dist/memory/brain-reasoning.js +215 -0
  278. package/dist/memory/brain-reasoning.js.map +1 -0
  279. package/dist/memory/brain-retrieval.js +542 -0
  280. package/dist/memory/brain-retrieval.js.map +1 -0
  281. package/dist/memory/brain-row-types.js +10 -0
  282. package/dist/memory/brain-row-types.js.map +1 -0
  283. package/dist/memory/brain-search.js +519 -0
  284. package/dist/memory/brain-search.js.map +1 -0
  285. package/dist/memory/brain-similarity.js +145 -0
  286. package/dist/memory/brain-similarity.js.map +1 -0
  287. package/dist/memory/claude-mem-migration.js +277 -0
  288. package/dist/memory/claude-mem-migration.js.map +1 -0
  289. package/dist/memory/decisions.js +162 -0
  290. package/dist/memory/decisions.js.map +1 -0
  291. package/dist/memory/embedding-local.js +97 -0
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  294. package/dist/memory/embedding-queue.js.map +1 -0
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  296. package/dist/memory/embedding-worker.js.map +1 -0
  297. package/dist/memory/engine-compat.js +1397 -0
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  299. package/dist/memory/index.js +1140 -0
  300. package/dist/memory/index.js.map +1 -0
  301. package/dist/memory/learnings.d.ts +2 -2
  302. package/dist/memory/learnings.js +121 -0
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  306. package/dist/memory/patterns.d.ts +4 -4
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  311. package/dist/memory/session-memory.js +331 -0
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  349. package/dist/nexus/deps.js +375 -0
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  994. package/src/validation/param-utils.ts +10 -7
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  1008. package/src/validation/protocols/protocols-markdown/decomposition.md +0 -4
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  1011. package/templates/global-config.template.json +0 -1
@@ -1,16 +1,18 @@
1
1
  /**
2
2
  * LocalTransport — In-process SQLite transport for fully offline agent messaging.
3
3
  *
4
- * Reads and writes messages directly to signaldock.db via node:sqlite.
4
+ * Reads and writes messages directly to conduit.db via node:sqlite.
5
5
  * No network calls. Works fully offline. Messages are stored in the
6
- * same schema that the Rust signaldock-storage crate manages, so both
7
- * the local CLI and the cloud backend see the same data.
6
+ * project-local conduit.db (ADR-037), keeping agent messaging isolated
7
+ * from the global-identity signaldock.db.
8
8
  *
9
9
  * Priority: LocalTransport is preferred over HttpTransport when
10
- * signaldock.db is available (see factory.ts).
10
+ * conduit.db is available (see factory.ts).
11
11
  *
12
12
  * @see docs/specs/SIGNALDOCK-UNIFIED-AGENT-REGISTRY.md Section 4.4
13
13
  * @task T213
14
+ * @task T356
15
+ * @epic T310
14
16
  */
15
17
 
16
18
  import { randomUUID } from 'node:crypto';
@@ -18,7 +20,7 @@ import { existsSync } from 'node:fs';
18
20
  import { createRequire } from 'node:module';
19
21
  import type { DatabaseSync } from 'node:sqlite';
20
22
  import type { ConduitMessage, Transport, TransportConnectConfig } from '@cleocode/contracts';
21
- import { getSignaldockDbPath } from '../store/signaldock-sqlite.js';
23
+ import { getConduitDbPath } from '../store/conduit-sqlite.js';
22
24
 
23
25
  const _require = createRequire(import.meta.url);
24
26
  const { DatabaseSync: DatabaseSyncClass } = _require('node:sqlite') as {
@@ -40,17 +42,20 @@ export class LocalTransport implements Transport {
40
42
  private state: LocalTransportState | null = null;
41
43
 
42
44
  /**
43
- * Connect to signaldock.db for in-process messaging.
45
+ * Connect to conduit.db for in-process messaging.
44
46
  *
45
47
  * Opens the database, sets WAL mode pragmas, and verifies
46
- * the messages table exists. Throws if signaldock.db is missing
48
+ * the messages table exists. Throws if conduit.db is missing
47
49
  * or uninitialized (run `cleo init` first).
50
+ *
51
+ * @task T356
52
+ * @epic T310
48
53
  */
49
54
  async connect(config: TransportConnectConfig): Promise<void> {
50
- const dbPath = getSignaldockDbPath();
55
+ const dbPath = getConduitDbPath(process.cwd());
51
56
 
52
57
  if (!existsSync(dbPath)) {
53
- throw new Error(`LocalTransport: signaldock.db not found at ${dbPath}. Run: cleo init`);
58
+ throw new Error(`LocalTransport: conduit.db not found at ${dbPath}. Run: cleo init`);
54
59
  }
55
60
 
56
61
  const db = new DatabaseSyncClass(dbPath);
@@ -66,7 +71,7 @@ export class LocalTransport implements Transport {
66
71
  if (!hasMessages) {
67
72
  db.close();
68
73
  throw new Error(
69
- 'LocalTransport: signaldock.db exists but messages table missing. Run: cleo upgrade',
74
+ 'LocalTransport: conduit.db exists but messages table missing run cleo init or allow auto-migration (T358)',
70
75
  );
71
76
  }
72
77
 
@@ -92,7 +97,7 @@ export class LocalTransport implements Transport {
92
97
  }
93
98
 
94
99
  /**
95
- * Store a message in signaldock.db.
100
+ * Store a message in conduit.db.
96
101
  *
97
102
  * Inserts into the messages table with status 'pending'.
98
103
  * For conversation messages, also links via conversation_participants
@@ -229,12 +234,17 @@ export class LocalTransport implements Transport {
229
234
  }
230
235
 
231
236
  /**
232
- * Check whether signaldock.db is available for local transport.
237
+ * Check whether conduit.db is available for local transport.
233
238
  *
234
239
  * Used by factory.ts to decide whether to use LocalTransport.
240
+ *
241
+ * @task T356
242
+ * @epic T310
243
+ * @param cwd - Optional working directory override (defaults to process.cwd()).
244
+ * @returns `true` if conduit.db exists at the expected path.
235
245
  */
236
246
  static isAvailable(cwd?: string): boolean {
237
- const dbPath = getSignaldockDbPath(cwd);
247
+ const dbPath = getConduitDbPath(cwd ?? process.cwd());
238
248
  return existsSync(dbPath);
239
249
  }
240
250
 
package/src/config.ts CHANGED
@@ -82,7 +82,6 @@ const DEFAULTS: CleoConfig = {
82
82
  brain: {
83
83
  autoCapture: true,
84
84
  captureFiles: false,
85
- captureMcp: false,
86
85
  captureWork: false,
87
86
  embedding: {
88
87
  enabled: true,
package/src/errors.ts CHANGED
@@ -77,6 +77,23 @@ function exitCodeToLafsCode(code: ExitCode): string {
77
77
  return `E_${category}_${name}`;
78
78
  }
79
79
 
80
+ /**
81
+ * Structured field-level details for constraint-violation errors.
82
+ * Surfaces in the LAFS envelope so agents can recover programmatically.
83
+ *
84
+ * @task T341
85
+ */
86
+ export interface CleoErrorDetails {
87
+ /** The specific field that failed validation. */
88
+ field: string;
89
+ /** The expected value or constraint (e.g. max length, valid enum members). */
90
+ expected?: unknown;
91
+ /** The actual value that was provided. */
92
+ actual?: unknown;
93
+ /** Additional context keys. */
94
+ [key: string]: unknown;
95
+ }
96
+
80
97
  /**
81
98
  * Structured error class for CLEO operations.
82
99
  * Carries an exit code, human-readable message, and optional fix suggestions.
@@ -87,6 +104,8 @@ export class CleoError extends Error {
87
104
  readonly code: ExitCode;
88
105
  readonly fix?: string;
89
106
  readonly alternatives?: Array<{ action: string; command: string }>;
107
+ /** Field-level details for constraint-violation errors. @task T341 */
108
+ readonly details?: CleoErrorDetails;
90
109
 
91
110
  constructor(
92
111
  code: ExitCode,
@@ -94,6 +113,7 @@ export class CleoError extends Error {
94
113
  options?: {
95
114
  fix?: string;
96
115
  alternatives?: Array<{ action: string; command: string }>;
116
+ details?: CleoErrorDetails;
97
117
  cause?: unknown;
98
118
  },
99
119
  ) {
@@ -102,6 +122,7 @@ export class CleoError extends Error {
102
122
  this.code = code;
103
123
  this.fix = options?.fix;
104
124
  this.alternatives = options?.alternatives;
125
+ this.details = options?.details;
105
126
  }
106
127
 
107
128
  /**
@@ -121,6 +142,7 @@ export class CleoError extends Error {
121
142
  name: getExitCodeName(this.code),
122
143
  ...(this.fix && { fix: this.fix }),
123
144
  ...(this.alternatives && { alternatives: this.alternatives }),
145
+ ...(this.details && { fieldDetails: this.details }),
124
146
  },
125
147
  };
126
148
  }
@@ -145,6 +167,7 @@ export class CleoError extends Error {
145
167
  recoverable: isRecoverableCode(this.code),
146
168
  ...(this.fix && { fix: this.fix }),
147
169
  ...(this.alternatives && { alternatives: this.alternatives }),
170
+ ...(this.details && { fieldDetails: this.details }),
148
171
  },
149
172
  };
150
173
  }
@@ -159,6 +182,7 @@ export class CleoError extends Error {
159
182
  message: this.message,
160
183
  ...(this.fix && { fix: this.fix }),
161
184
  ...(this.alternatives && { alternatives: this.alternatives }),
185
+ ...(this.details && { details: this.details }),
162
186
  },
163
187
  };
164
188
  }
@@ -59,7 +59,6 @@ function makeConfig(
59
59
  autoCapture?: boolean;
60
60
  captureWork?: boolean;
61
61
  captureFiles?: boolean;
62
- captureMcp?: boolean;
63
62
  autoRefresh?: boolean;
64
63
  } = {},
65
64
  ): Awaited<ReturnType<typeof configModule.loadConfig>> {
@@ -68,7 +67,6 @@ function makeConfig(
68
67
  autoCapture: overrides.autoCapture ?? true,
69
68
  captureWork: overrides.captureWork ?? false,
70
69
  captureFiles: overrides.captureFiles ?? false,
71
- captureMcp: overrides.captureMcp ?? false,
72
70
  memoryBridge: { autoRefresh: overrides.autoRefresh ?? false },
73
71
  embedding: { enabled: false, provider: 'local' },
74
72
  summarization: { enabled: false },
@@ -564,9 +562,8 @@ describe('hook automation E2E', () => {
564
562
  );
565
563
  });
566
564
 
567
- it('work-capture and mcp-hooks register on same event but use different config keys', async () => {
568
- // work-capture is keyed on captureWork; mcp-hooks keyed on captureMcp
569
- // When both are disabled (default), neither fires
565
+ it('work-capture does not fire when captureWork is disabled (default)', async () => {
566
+ // When captureWork is disabled (default), work-capture does not fire
570
567
  await handleWorkPromptSubmit(PROJECT_ROOT, {
571
568
  timestamp: TIMESTAMP,
572
569
  gateway: 'mutate',
@@ -7,6 +7,9 @@
7
7
  * T138: Triggers memory bridge refresh on session start and end.
8
8
  * T139: Regenerates bridge with session scope on start.
9
9
  * T144: Extracts transcript observations on session end.
10
+ * T5158: Auto-snapshots SQLite databases (tasks.db + brain.db) via
11
+ * VACUUM INTO on SessionEnd to preserve a recovery point now that
12
+ * the databases are no longer tracked in project git (ADR-013).
10
13
  */
11
14
 
12
15
  import { hooks } from '../registry.js';
@@ -99,6 +102,35 @@ export async function handleSessionEnd(
99
102
  await maybeRefreshMemoryBridge(projectRoot);
100
103
  }
101
104
 
105
+ /**
106
+ * Handle SessionEnd - snapshot SQLite databases to `.cleo/backups/sqlite/`.
107
+ *
108
+ * ADR-013 / T5158: `.cleo/tasks.db` and `.cleo/brain.db` are NOT tracked in
109
+ * project git, so we need an out-of-band recovery mechanism. This handler
110
+ * calls `vacuumIntoBackupAll` with `force: true` at every session end to
111
+ * guarantee a fresh point-in-time snapshot of both databases.
112
+ *
113
+ * Rotation (MAX_SNAPSHOTS = 10 per database) is handled inside
114
+ * `sqlite-backup.ts`. Failures here are non-fatal: a backup error must
115
+ * never block session end.
116
+ *
117
+ * The `vacuumIntoBackupAll` import is deferred to call time so tests that
118
+ * auto-load session-hooks (e.g. via `handlers/index.ts`) do not have to
119
+ * mock every transitive dependency of `sqlite-backup.ts` at hoisted
120
+ * `vi.mock` time.
121
+ */
122
+ export async function handleSessionEndBackup(
123
+ projectRoot: string,
124
+ _payload: SessionEndPayload,
125
+ ): Promise<void> {
126
+ try {
127
+ const { vacuumIntoBackupAll } = await import('../../store/sqlite-backup.js');
128
+ await vacuumIntoBackupAll({ cwd: projectRoot, force: true });
129
+ } catch {
130
+ // Backup failures are best-effort — never block session end on them.
131
+ }
132
+ }
133
+
102
134
  // Register handlers on module load
103
135
  hooks.register({
104
136
  id: 'brain-session-start',
@@ -113,3 +145,13 @@ hooks.register({
113
145
  handler: handleSessionEnd,
114
146
  priority: 100,
115
147
  });
148
+
149
+ // Lower priority (10) runs AFTER the brain/memory-bridge handlers so the
150
+ // snapshot captures the most up-to-date brain.db state including the
151
+ // SessionEnd observation just written by handleSessionEnd above.
152
+ hooks.register({
153
+ id: 'backup-session-end',
154
+ event: 'SessionEnd',
155
+ handler: handleSessionEndBackup,
156
+ priority: 10,
157
+ });
package/src/init.ts CHANGED
@@ -11,8 +11,7 @@
11
11
  * 4. Sequence counter (SQLite schema_meta)
12
12
  * 5. Project info (.cleo/project-info.json)
13
13
  * 6. CAAMP injection into agent instruction files (AGENTS.md hub pattern)
14
- * 7. (removed was MCP server installation)
15
- * 8. Agent definition installation (cleo-subagent)
14
+ * 7. Agent definition installation (cleo-subagent)
16
15
  * 9. Core skill installation via CAAMP
17
16
  * 10. NEXUS project registration
18
17
  * 11. Project type detection (--detect)
package/src/internal.ts CHANGED
@@ -266,7 +266,7 @@ export {
266
266
  getRealTokenUsage,
267
267
  } from './otel/index.js';
268
268
  // Paths (additional)
269
- export { getAgentOutputsAbsolute, getAgentsHome } from './paths.js';
269
+ export { getAgentOutputsAbsolute, getAgentsHome, getProjectRoot } from './paths.js';
270
270
  // Phases — dependency graph (taskId-scoped critical path; distinct from tasks/graph-ops getCriticalPath)
271
271
  export type { CriticalPathResult as DepsCriticalPathResult } from './phases/deps.js';
272
272
  export { getCriticalPath as depsCriticalPath } from './phases/deps.js';
@@ -411,20 +411,49 @@ export type { CreateStickyParams, ListStickiesParams, StickyNote } from './stick
411
411
  // Store
412
412
  export { createBackup, listBackups, restoreFromBackup } from './store/backup.js';
413
413
  export { getBrainDb, getBrainNativeDb } from './store/brain-sqlite.js';
414
+ export type { LegacyCleanupResult, StrayNexusCleanupResult } from './store/cleanup-legacy.js';
415
+ export {
416
+ detectAndRemoveLegacyGlobalFiles,
417
+ detectAndRemoveStrayProjectNexus,
418
+ } from './store/cleanup-legacy.js';
414
419
  export {
415
420
  gitCheckpoint,
416
421
  gitCheckpointStatus,
417
422
  isCleoGitInitialized,
418
423
  } from './store/git-checkpoint.js';
419
424
  export { computeChecksum, readJson } from './store/json.js';
425
+ export type { MigrationResult } from './store/migrate-signaldock-to-conduit.js';
426
+ export {
427
+ migrateSignaldockToConduit,
428
+ needsSignaldockToConduitMigration,
429
+ } from './store/migrate-signaldock-to-conduit.js';
420
430
  export { createSession, getActiveSession } from './store/session-store.js';
421
431
  export {
432
+ _resetGlobalSignaldockDb_TESTING_ONLY,
433
+ checkGlobalSignaldockDbHealth,
422
434
  checkSignaldockDbHealth,
435
+ ensureGlobalSignaldockDb,
423
436
  ensureSignaldockDb,
437
+ GLOBAL_SIGNALDOCK_DB_FILENAME,
438
+ GLOBAL_SIGNALDOCK_SCHEMA_VERSION,
439
+ getGlobalSignaldockDbPath,
440
+ getGlobalSignaldockNativeDb,
424
441
  getSignaldockDbPath,
425
442
  SIGNALDOCK_SCHEMA_VERSION,
426
443
  } from './store/signaldock-sqlite.js';
427
444
  export { getDb, getNativeDb } from './store/sqlite.js';
445
+ export type { BackupScope, GlobalBackupEntry, GlobalSaltBackupEntry } from './store/sqlite-backup.js';
446
+ export {
447
+ backupGlobalSalt,
448
+ listBrainBackups,
449
+ listGlobalSaltBackups,
450
+ listGlobalSqliteBackups,
451
+ listSqliteBackups,
452
+ listSqliteBackupsAll,
453
+ vacuumIntoBackup,
454
+ vacuumIntoBackupAll,
455
+ vacuumIntoGlobalBackup,
456
+ } from './store/sqlite-backup.js';
428
457
  export { createTask, getTask } from './store/task-store.js';
429
458
  export {
430
459
  auditLog,
@@ -574,6 +603,7 @@ export type {
574
603
  export {
575
604
  buildCommanderArgs,
576
605
  buildCommanderOptionString,
606
+ buildDispatchInputSchema,
577
607
  buildMcpInputSchema,
578
608
  camelToKebab,
579
609
  validateRequiredParamsDef,
@@ -792,7 +822,7 @@ export {
792
822
  getReadyTasks as orchestrationGetReadyTasks,
793
823
  } from './orchestration/index.js';
794
824
  // Paths (additional)
795
- export { getBackupDir, getTaskPath } from './paths.js';
825
+ export { getBackupDir, getCleoHome, getConfigPath, getTaskPath } from './paths.js';
796
826
  // Scaffold (additional)
797
827
  export { ensureContributorMcp, ensureGlobalTemplates, ensureProjectContext } from './scaffold.js';
798
828
  // Sequence (additional)
@@ -807,6 +837,8 @@ export {
807
837
  } from './skills/precedence-integration.js';
808
838
  // Spawn
809
839
  export { initializeDefaultAdapters, spawnRegistry } from './spawn/adapter-registry.js';
840
+ // Nexus DB path (global tier)
841
+ export { getNexusDbPath } from './store/nexus-sqlite.js';
810
842
  // System — backup (different from store/backup.ts)
811
843
  export { createBackup as systemCreateBackup } from './system/backup.js';
812
844
  export type { DoctorReport, FixResult } from './system/health.js';
@@ -830,6 +862,30 @@ export { createSqliteDataAccessor } from './store/sqlite-data-accessor.js';
830
862
  // Validation — doctor checks (used by cleo init tests)
831
863
  export { checkRootGitignore } from './validation/doctor/checks.js';
832
864
 
865
+ // ---------------------------------------------------------------------------
866
+ // T310 startup sequence exports (required by cli/index.ts T360 wire-up)
867
+ // ---------------------------------------------------------------------------
868
+
869
+ // Conduit DB lifecycle — ensureConduitDb is called at every CLI startup (step 3)
870
+ export type { ProjectAgentRef } from './store/conduit-sqlite.js';
871
+ export {
872
+ CONDUIT_DB_FILENAME,
873
+ CONDUIT_SCHEMA_VERSION,
874
+ checkConduitDbHealth,
875
+ ensureConduitDb,
876
+ getConduitDbPath,
877
+ getConduitNativeDb,
878
+ } from './store/conduit-sqlite.js';
879
+
880
+ // Global-salt lifecycle — validateGlobalSalt and getGlobalSalt used at startup (step 5)
881
+ export {
882
+ GLOBAL_SALT_FILENAME,
883
+ GLOBAL_SALT_SIZE,
884
+ getGlobalSalt,
885
+ getGlobalSaltPath,
886
+ validateGlobalSalt,
887
+ } from './store/global-salt.js';
888
+
833
889
  // ---------------------------------------------------------------------------
834
890
  // Agent Registry + Conduit (T170 Unification)
835
891
  // ---------------------------------------------------------------------------
@@ -838,4 +894,12 @@ export { ConduitClient } from './conduit/conduit-client.js';
838
894
  export { createConduit } from './conduit/factory.js';
839
895
  export { HttpTransport } from './conduit/http-transport.js';
840
896
  export { decrypt, encrypt } from './crypto/credentials.js';
841
- export { AgentRegistryAccessor } from './store/agent-registry-accessor.js';
897
+ export {
898
+ AgentRegistryAccessor,
899
+ attachAgentToProject,
900
+ createProjectAgent,
901
+ detachAgentFromProject,
902
+ getProjectAgentRef,
903
+ listAgentsForProject,
904
+ lookupAgent,
905
+ } from './store/agent-registry-accessor.js';
@@ -0,0 +1,133 @@
1
+ ---
2
+ kind: lifecycle
3
+ version: 1.0.0
4
+ title: "RCASD-IVTR+C Pipeline Stages"
5
+ status: active
6
+ ---
7
+
8
+ # RCASD-IVTR+C Pipeline Stage Definitions
9
+ #
10
+ # Canonical pipeline stages in execution order.
11
+ # Source of truth: packages/core/src/lifecycle/stages.ts
12
+ #
13
+ # Stages: research, consensus, architecture_decision, specification,
14
+ # decomposition, implementation, validation, testing, release
15
+ #
16
+ # Cross-cutting stage: contribution (not part of pipeline execution order,
17
+ # tracked for attribution and provenance recording)
18
+ #
19
+ # Stage 1: Research
20
+ # order: 1
21
+ # category: planning
22
+ # description: Information gathering, exploration, and knowledge acquisition
23
+ # skippable: false
24
+ # defaultTimeoutHours: 48
25
+ # requiredGates: prerequisites-met
26
+ # expectedArtifacts: research-report, findings-document
27
+ #
28
+ # Stage 2: Consensus
29
+ # order: 2
30
+ # category: decision
31
+ # description: Multi-agent decision making and validation of research findings
32
+ # skippable: true
33
+ # defaultTimeoutHours: 24
34
+ # requiredGates: research-complete, agreement-reached
35
+ # expectedArtifacts: consensus-record, decision-log
36
+ #
37
+ # Stage 3: Architecture Decision
38
+ # order: 3
39
+ # category: decision
40
+ # description: Architecture Decision Records - documenting significant technical decisions
41
+ # skippable: true
42
+ # defaultTimeoutHours: 24
43
+ # requiredGates: decisions-documented, review-completed
44
+ # expectedArtifacts: adr-document
45
+ #
46
+ # Stage 4: Specification
47
+ # order: 4
48
+ # category: planning
49
+ # description: Specification writing - RFC-style documentation of requirements and design
50
+ # skippable: false
51
+ # defaultTimeoutHours: 72
52
+ # requiredGates: spec-complete, spec-reviewed
53
+ # expectedArtifacts: spec-document, api-spec, design-doc
54
+ #
55
+ # Stage 5: Decomposition
56
+ # order: 5
57
+ # category: planning
58
+ # description: Task breakdown - splitting work into atomic, executable tasks
59
+ # skippable: false
60
+ # defaultTimeoutHours: 24
61
+ # requiredGates: tasks-created, dependencies-mapped
62
+ # expectedArtifacts: task-breakdown, dependency-graph
63
+ #
64
+ # Stage 6: Implementation
65
+ # order: 6
66
+ # category: execution
67
+ # description: Implementation - writing code and building features
68
+ # skippable: false
69
+ # defaultTimeoutHours: none
70
+ # requiredGates: code-complete, lint-passing
71
+ # expectedArtifacts: source-code, implementation-notes
72
+ #
73
+ # Stage 7: Validation
74
+ # order: 7
75
+ # category: validation
76
+ # description: Verification - static analysis, type checking, and quality gates
77
+ # skippable: false
78
+ # defaultTimeoutHours: 12
79
+ # requiredGates: static-analysis-pass, type-check-pass
80
+ # expectedArtifacts: verification-report
81
+ #
82
+ # Stage 8: Testing
83
+ # order: 8
84
+ # category: validation
85
+ # description: Testing - running test suites and ensuring coverage
86
+ # skippable: false
87
+ # defaultTimeoutHours: 24
88
+ # requiredGates: tests-pass, coverage-met
89
+ # expectedArtifacts: test-results, coverage-report
90
+ #
91
+ # Stage 9: Release
92
+ # order: 9
93
+ # category: delivery
94
+ # description: Release - versioning, publishing, and deployment
95
+ # skippable: true
96
+ # defaultTimeoutHours: 4
97
+ # requiredGates: version-bumped, changelog-updated, artifacts-published
98
+ # expectedArtifacts: version-tag, release-notes, published-package
99
+ #
100
+ # Stage Categories:
101
+ # planning: research, specification, decomposition
102
+ # decision: consensus, architecture_decision
103
+ # execution: implementation
104
+ # validation: validation, testing
105
+ # delivery: release
106
+ #
107
+ # Prerequisites:
108
+ # research: (none)
109
+ # consensus: research
110
+ # architecture_decision: research, consensus
111
+ # specification: research, consensus, architecture_decision
112
+ # decomposition: research, specification
113
+ # implementation: research, specification, decomposition
114
+ # validation: implementation
115
+ # testing: implementation, validation
116
+ # release: implementation, validation, testing
117
+ #
118
+ # Transition Rules:
119
+ # Forward progressions (always allowed):
120
+ # research -> consensus -> architecture_decision -> specification
121
+ # specification -> decomposition -> implementation -> validation
122
+ # validation -> testing -> release
123
+ # Skip patterns (allowed with force):
124
+ # research -> specification (skipping consensus + architecture_decision)
125
+ # specification -> implementation (skipping decomposition)
126
+ # Backward transitions (allowed with force, for rework):
127
+ # implementation -> specification (rework required)
128
+ # testing -> implementation (fix test failures)
129
+ # Disallowed:
130
+ # release -> any (pipeline completed)
131
+ #
132
+ # Stage Status Values:
133
+ # not_started, in_progress, completed, skipped, blocked, failed
@@ -37,7 +37,7 @@ const SAMPLE_ENTRIES = [
37
37
  date: '2026-01-15',
38
38
  status: 'completed',
39
39
  agent_type: 'research',
40
- topics: ['mcp', 'engine'],
40
+ topics: ['async-ops', 'engine'],
41
41
  key_findings: ['finding1', 'finding2', 'finding3'],
42
42
  actionable: true,
43
43
  linked_tasks: ['T001'],
@@ -186,7 +186,7 @@ describe('Pipeline Manifest SQLite (moved from memory domain)', () => {
186
186
 
187
187
  it('should search by topic', async () => {
188
188
  await seedEntries();
189
- const result = await pipelineManifestFind('mcp', {}, testRoot);
189
+ const result = await pipelineManifestFind('async-ops', {}, testRoot);
190
190
  expect(result.success).toBe(true);
191
191
  expect((result.data as any).total).toBeGreaterThan(0);
192
192
  });
@@ -45,8 +45,8 @@ const ENTRY_A: ExtendedManifestEntry = {
45
45
  date: '2026-01-15',
46
46
  status: 'completed',
47
47
  agent_type: 'research',
48
- topics: ['mcp', 'engine'],
49
- key_findings: ['This library is deprecated', 'MCP supports structured output'],
48
+ topics: ['async-ops', 'engine'],
49
+ key_findings: ['This library is deprecated', 'System supports structured output'],
50
50
  actionable: true,
51
51
  linked_tasks: ['T001'],
52
52
  needs_followup: [],
@@ -464,9 +464,9 @@ describe('pipeline-manifest-sqlite', () => {
464
464
 
465
465
  it('should filter by topic param', async () => {
466
466
  await seedEntries(testRoot, [ENTRY_A, ENTRY_C]);
467
- const result = await pipelineManifestContradictions(testRoot, { topic: 'mcp' });
467
+ const result = await pipelineManifestContradictions(testRoot, { topic: 'async-ops' });
468
468
  expect(result.success).toBe(true);
469
- // ENTRY_C doesn't have 'mcp' topic, so no contradictions on that topic
469
+ // ENTRY_C doesn't have 'async-ops' topic, so no contradictions on that topic
470
470
  expect((result.data as any).contradictions.length).toBe(0);
471
471
  });
472
472
  });
@@ -43,7 +43,7 @@ describe('queryLogs', () => {
43
43
  pid: 1,
44
44
  hostname: 'h',
45
45
  msg: 'Start',
46
- subsystem: 'mcp',
46
+ subsystem: 'engine',
47
47
  }),
48
48
  JSON.stringify({
49
49
  level: 'WARN',
@@ -273,7 +273,7 @@ describe('getLogSummary', () => {
273
273
  pid: 1,
274
274
  hostname: 'h',
275
275
  msg: 'a',
276
- subsystem: 'mcp',
276
+ subsystem: 'engine',
277
277
  }),
278
278
  JSON.stringify({
279
279
  level: 'INFO',
@@ -281,7 +281,7 @@ describe('getLogSummary', () => {
281
281
  pid: 2,
282
282
  hostname: 'h',
283
283
  msg: 'b',
284
- subsystem: 'mcp',
284
+ subsystem: 'engine',
285
285
  }),
286
286
  JSON.stringify({
287
287
  level: 'WARN',
@@ -305,7 +305,7 @@ describe('getLogSummary', () => {
305
305
  const summary = getLogSummary({ scope: 'project' }, tmpDir);
306
306
  expect(summary.totalEntries).toBe(4);
307
307
  expect(summary.byLevel).toEqual({ INFO: 2, WARN: 1, ERROR: 1 });
308
- expect(summary.bySubsystem).toEqual({ mcp: 2, engine: 2 });
308
+ expect(summary.bySubsystem).toEqual({ engine: 4 });
309
309
  expect(summary.dateRange).not.toBeNull();
310
310
  expect(summary.dateRange!.earliest).toBe('2026-02-28T10:00:00Z');
311
311
  expect(summary.dateRange!.latest).toBe('2026-02-28T10:03:00Z');
@@ -73,7 +73,7 @@ describe('matchesFilter', () => {
73
73
  it('filters by subsystem', () => {
74
74
  const entry = makeEntry({ subsystem: 'engine' });
75
75
  expect(matchesFilter(entry, { subsystem: 'engine' })).toBe(true);
76
- expect(matchesFilter(entry, { subsystem: 'mcp' })).toBe(false);
76
+ expect(matchesFilter(entry, { subsystem: 'dispatch' })).toBe(false);
77
77
  });
78
78
 
79
79
  it('filters by code', () => {
@@ -105,7 +105,7 @@ describe('matchesFilter', () => {
105
105
  it('applies AND logic for multiple criteria', () => {
106
106
  const entry = makeEntry({ level: 'ERROR', subsystem: 'engine', code: 'E_NOT_FOUND' });
107
107
  expect(matchesFilter(entry, { level: 'ERROR', subsystem: 'engine' })).toBe(true);
108
- expect(matchesFilter(entry, { level: 'ERROR', subsystem: 'mcp' })).toBe(false);
108
+ expect(matchesFilter(entry, { level: 'ERROR', subsystem: 'dispatch' })).toBe(false);
109
109
  expect(matchesFilter(entry, { level: 'WARN', subsystem: 'engine' })).toBe(false);
110
110
  });
111
111
 
@@ -119,10 +119,10 @@ describe('matchesFilter', () => {
119
119
 
120
120
  describe('filterEntries', () => {
121
121
  const entries = [
122
- makeEntry({ level: 'INFO', msg: 'Starting server', subsystem: 'mcp' }),
122
+ makeEntry({ level: 'INFO', msg: 'Starting server', subsystem: 'dispatch' }),
123
123
  makeEntry({ level: 'WARN', msg: 'Task not found', subsystem: 'engine', code: 'E_NOT_FOUND' }),
124
124
  makeEntry({ level: 'ERROR', msg: 'Database locked', subsystem: 'engine', exitCode: 3 }),
125
- makeEntry({ level: 'INFO', msg: 'Server stopped', subsystem: 'mcp' }),
125
+ makeEntry({ level: 'INFO', msg: 'Server stopped', subsystem: 'dispatch' }),
126
126
  ];
127
127
 
128
128
  it('returns all entries for empty filter', () => {