@cleocode/core 2026.4.42 → 2026.4.43

package/dist/memory/brain-purge.js

@@ -1,243 +0,0 @@
-/**
- * Brain.db noise purge utility — removes 2927 noise entries leaving ~57 signal entries.
- *
- * Purge rules:
- * - Patterns: keep newest per unique pattern text (dedup), delete duplicates
- * - Learnings: delete ALL (all are auto-generated task completion noise)
- * - Decisions: delete ALL except D-mntpeeer (the one real architectural decision)
- * - Observations: delete task-start/task-complete/session-note/test/junk noise
- *
- * Safety: requires backup to exist before calling. Never touches tasks.db.
- *
- * @task T524
- * @epic T523
- */
-import { inArray, ne, sql } from 'drizzle-orm';
-import { brainDecisions, brainLearnings, brainObservations, brainPatterns, } from '../store/brain-schema.js';
-import { getBrainDb, getBrainNativeDb } from '../store/brain-sqlite.js';
-import { ensureFts5Tables, rebuildFts5Index } from './brain-search.js';
-/**
- * Count rows in a table using native DB PRAGMA (avoids Drizzle type issues).
- * Falls back to 0 on error.
- */
-function countRowsNative(tableName) {
-    const nativeDb = getBrainNativeDb();
-    if (!nativeDb)
-        return 0;
-    try {
-        const row = nativeDb.prepare(`SELECT COUNT(*) AS cnt FROM ${tableName}`).get();
-        return row?.cnt ?? 0;
-    }
-    catch {
-        return 0;
-    }
-}
-/**
- * Execute the brain.db noise purge.
- *
- * Deletes ~2927 noise entries across four tables, leaving ~57 signal entries.
- * The one real architectural decision (D-mntpeeer) is explicitly preserved.
- *
- * Rules applied in order:
- * 1. Patterns: deduplicate by pattern text — keep newest per unique text, delete older dupes
- * 2. Learnings: delete all (100% noise — auto-generated "Completed:" and dependency notices)
- * 3. Decisions: delete all except D-mntpeeer
- * 4. Observations: delete task-start, task-complete, session-note, and test/junk entries
- *
- * @param projectRoot - Absolute path to the project root (e.g. /mnt/projects/cleocode)
- * @returns PurgeResult with before/after counts and FTS5 status
- */
-export async function purgeBrainNoise(projectRoot) {
-    const db = await getBrainDb(projectRoot);
-    // =========================================================================
-    // Pre-purge counts
-    // =========================================================================
-    const beforePatterns = countRowsNative('brain_patterns');
-    const beforeLearnings = countRowsNative('brain_learnings');
-    const beforeDecisions = countRowsNative('brain_decisions');
-    const beforeObservations = countRowsNative('brain_observations');
-    console.log('Pre-purge counts:');
-    console.log(`  Patterns:     ${beforePatterns}`);
-    console.log(`  Learnings:    ${beforeLearnings}`);
-    console.log(`  Decisions:    ${beforeDecisions}`);
-    console.log(`  Observations: ${beforeObservations}`);
-    // =========================================================================
-    // SAFETY: Confirm D-mntpeeer exists before any destructive operation
-    // =========================================================================
-    const realDecision = await db.select().from(brainDecisions).where(sql `id = 'D-mntpeeer'`);
-    if (realDecision.length === 0) {
-        throw new Error('SAFETY ABORT: D-mntpeeer not found in brain_decisions. Backup and restore required.');
-    }
-    console.log('Safety check passed: D-mntpeeer confirmed present');
-    // =========================================================================
-    // Rule 1: Pattern deduplication
-    // Strategy: for each unique pattern text, find the MAX(extracted_at) row,
-    // delete all other rows with the same text.
-    // =========================================================================
-    // Get all patterns to find duplicates in TS (safer than raw SQL subquery)
-    const allPatterns = await db.select().from(brainPatterns);
-    // Group by normalized pattern text
-    const patternGroups = new Map();
-    for (const p of allPatterns) {
-        const key = p.pattern.trim().toLowerCase();
-        const group = patternGroups.get(key) ?? [];
-        group.push(p);
-        patternGroups.set(key, group);
-    }
-    // Collect IDs to delete: for each group with >1 entry, keep newest (max extractedAt), delete rest
-    const patternIdsToDelete = [];
-    for (const [, group] of patternGroups) {
-        if (group.length <= 1)
-            continue;
-        // Sort by extractedAt desc, keep first, delete the rest
-        group.sort((a, b) => (b.extractedAt > a.extractedAt ? 1 : -1));
-        const toDelete = group.slice(1).map((p) => p.id);
-        patternIdsToDelete.push(...toDelete);
-    }
-    let patternsDeleted = 0;
-    if (patternIdsToDelete.length > 0) {
-        // Delete in batches of 500 to avoid SQLite parameter limits
-        const BATCH = 500;
-        for (let i = 0; i < patternIdsToDelete.length; i += BATCH) {
-            const batch = patternIdsToDelete.slice(i, i + BATCH);
-            await db.delete(brainPatterns).where(inArray(brainPatterns.id, batch));
-            patternsDeleted += batch.length;
-        }
-    }
-    console.log(`Patterns deleted (dedup): ${patternsDeleted}`);
-    // =========================================================================
-    // Rule 2: Delete ALL learnings (100% noise)
-    // All learnings are auto-generated "Completed: T..." or dependency notices
-    // =========================================================================
-    // Count before delete using run
-    const learningsRows = await db.select().from(brainLearnings);
-    const learningsDeleted = learningsRows.length;
-    if (learningsDeleted > 0) {
-        // Delete in batches using IDs
-        const ids = learningsRows.map((r) => r.id);
-        const BATCH = 500;
-        for (let i = 0; i < ids.length; i += BATCH) {
-            const batch = ids.slice(i, i + BATCH);
-            await db.delete(brainLearnings).where(inArray(brainLearnings.id, batch));
-        }
-    }
-    console.log(`Learnings deleted (all): ${learningsDeleted}`);
-    // =========================================================================
-    // Rule 3: Delete ALL decisions EXCEPT D-mntpeeer
-    // =========================================================================
-    const decisionsToDelete = await db
-        .select()
-        .from(brainDecisions)
-        .where(ne(brainDecisions.id, 'D-mntpeeer'));
-    const decisionsDeleted = decisionsToDelete.length;
-    if (decisionsDeleted > 0) {
-        const ids = decisionsToDelete.map((r) => r.id);
-        await db.delete(brainDecisions).where(inArray(brainDecisions.id, ids));
-    }
-    console.log(`Decisions deleted (all except D-mntpeeer): ${decisionsDeleted}`);
-    // =========================================================================
-    // Rule 4: Delete noise observations
-    // Keep: real release notes, real codebase analysis, real session handoffs
-    // Delete: task-start, task-complete, session-note, test/junk entries
-    // =========================================================================
-    // Collect all observations to classify them
-    const allObservations = await db.select().from(brainObservations);
-    const obsIdsToDelete = [];
-    for (const obs of allObservations) {
-        const title = obs.title ?? '';
-        const narrative = (obs.narrative ?? '').toLowerCase();
-        const titleLower = title.toLowerCase();
-        // Rule 4a: Task lifecycle noise
-        if (title.startsWith('Task start: T') ||
-            title.startsWith('Task complete: T') ||
-            title.startsWith('Task depended on') ||
-            title.startsWith('Task T') // catch "Task T527 depended on..." etc.
-        ) {
-            obsIdsToDelete.push(obs.id);
-            continue;
-        }
-        // Rule 4b: Session notes (all are noise — real handoffs are in sticky notes)
-        if (title.startsWith('Session note:')) {
-            obsIdsToDelete.push(obs.id);
-            continue;
-        }
-        // Rule 4c: Test/audit/probe/junk observations
-        const testKeywords = [
-            'audit test',
-            'audit probe',
-            'probe observation',
-            'dup test',
-            'provider test',
-            'brain regression',
-            'brain validation',
-            'release test',
-            'functional validation',
-            'test title',
-            'test decision',
-            'test learning',
-            'test pattern',
-            'test observation',
-            'sticky note', // audit test sticky note
-        ];
-        const isTestNoise = testKeywords.some((kw) => titleLower.includes(kw) || narrative.includes(kw));
-        if (isTestNoise) {
-            obsIdsToDelete.push(obs.id);
-        }
-        // Rule 4d: Auto-detection codebase map noise (keep real ones, delete duplicates)
-        // "Codebase Stack Analysis" and "Codebase Integrations" — keep one of each,
-        // but the task asks us to keep ~27 so we apply conservative rules.
-        // Only delete if title exactly matches auto-generated repeated patterns.
-    }
-    let observationsDeleted = 0;
-    if (obsIdsToDelete.length > 0) {
-        const BATCH = 500;
-        for (let i = 0; i < obsIdsToDelete.length; i += BATCH) {
-            const batch = obsIdsToDelete.slice(i, i + BATCH);
-            await db.delete(brainObservations).where(inArray(brainObservations.id, batch));
-            observationsDeleted += batch.length;
-        }
-    }
-    console.log(`Observations deleted: ${observationsDeleted}`);
-    // =========================================================================
-    // Post-purge counts
-    // =========================================================================
-    const afterPatterns = countRowsNative('brain_patterns');
-    const afterLearnings = countRowsNative('brain_learnings');
-    const afterDecisions = countRowsNative('brain_decisions');
-    const afterObservations = countRowsNative('brain_observations');
-    console.log('\nPost-purge counts:');
-    console.log(`  Patterns:     ${afterPatterns} (deleted ${beforePatterns - afterPatterns})`);
-    console.log(`  Learnings:    ${afterLearnings} (deleted ${beforeLearnings - afterLearnings})`);
-    console.log(`  Decisions:    ${afterDecisions} (deleted ${beforeDecisions - afterDecisions})`);
-    console.log(`  Observations: ${afterObservations} (deleted ${beforeObservations - afterObservations})`);
-    // =========================================================================
-    // Rebuild FTS5 indexes after bulk deletes
-    // =========================================================================
-    let fts5Rebuilt = false;
-    const nativeDb = getBrainNativeDb();
-    if (nativeDb) {
-        ensureFts5Tables(nativeDb);
-        try {
-            rebuildFts5Index(nativeDb);
-            fts5Rebuilt = true;
-            console.log('FTS5 indexes rebuilt successfully');
-        }
-        catch (err) {
-            console.warn('FTS5 rebuild failed (non-fatal):', err);
-        }
-    }
-    return {
-        patternsDeleted: beforePatterns - afterPatterns,
-        learningsDeleted: beforeLearnings - afterLearnings,
-        decisionsDeleted: beforeDecisions - afterDecisions,
-        observationsDeleted: beforeObservations - afterObservations,
-        after: {
-            patterns: afterPatterns,
-            learnings: afterLearnings,
-            decisions: afterDecisions,
-            observations: afterObservations,
-        },
-        fts5Rebuilt,
-    };
-}
-//# sourceMappingURL=brain-purge.js.map

package/dist/memory/brain-purge.js.map

@@ -1 +0,0 @@
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package/dist/memory/brain-reasoning.js

@@ -1,215 +0,0 @@
-/**
- * BRAIN Reasoning — causal trace through task dependency chains.
- *
- * `reasonWhy(taskId)` walks upstream through a task's blocker chain,
- * enriching each node with related brain_decisions. Leaf tasks with
- * no further unresolved blockers are identified as root causes.
- *
- * @task T5390
- * @epic T5149
- */
-import { getBrainAccessor } from '../store/brain-accessor.js';
-import { getAccessor } from '../store/data-accessor.js';
-import { searchBrain } from './brain-search.js';
-import { searchSimilar } from './brain-similarity.js';
-// ============================================================================
-// Implementation
-// ============================================================================
-const MAX_DEPTH = 10;
-/**
- * Build a causal trace for why a task is blocked.
- *
- * Walks upstream through `depends` fields, collecting unresolved blockers
- * and their associated brain decisions. Leaf blockers (no further unresolved
- * deps) are reported as root causes.
- */
-export async function reasonWhy(taskId, projectRoot, taskAccessor) {
-    const acc = taskAccessor ?? (await getAccessor(projectRoot));
-    const { tasks: reasonTasks } = await acc.queryTasks({});
-    const taskMap = new Map(reasonTasks.map((t) => [t.id, t]));
-    const completedStatuses = new Set(['done', 'cancelled']);
-    let accessor = null;
-    try {
-        accessor = await getBrainAccessor(projectRoot);
-    }
-    catch {
-        // brain.db may not exist — proceed without decisions
-    }
-    const visited = new Set();
-    const blockers = [];
-    let maxDepthReached = 0;
-    async function walk(id, depth) {
-        if (visited.has(id))
-            return;
-        if (depth > MAX_DEPTH)
-            return;
-        visited.add(id);
-        if (depth > maxDepthReached) {
-            maxDepthReached = depth;
-        }
-        const task = taskMap.get(id);
-        if (!task)
-            return;
-        // Collect unresolved dependencies
-        const unresolvedDeps = (task.depends ?? []).filter((depId) => {
-            const dep = taskMap.get(depId);
-            return dep && !completedStatuses.has(dep.status);
-        });
-        if (unresolvedDeps.length === 0 && id !== taskId) {
-            // This is a leaf blocker — no further unresolved deps
-            return;
-        }
-        for (const depId of unresolvedDeps) {
-            if (visited.has(depId))
-                continue;
-            const dep = taskMap.get(depId);
-            // Query brain decisions related to this blocker
-            let decisions = [];
-            if (accessor) {
-                const relatedDecisions = await findDecisionsForTask(accessor, depId);
-                decisions = relatedDecisions.map((d) => ({
-                    id: d.id,
-                    title: d.decision,
-                    rationale: d.rationale,
-                }));
-            }
-            blockers.push({
-                taskId: depId,
-                status: dep.status,
-                reason: dep.blockedBy ?? undefined,
-                decisions,
-            });
-            await walk(depId, depth + 1);
-        }
-    }
-    await walk(taskId, 0);
-    // Root causes: leaf blockers whose own deps are all resolved or absent
-    const blockerIds = new Set(blockers.map((b) => b.taskId));
-    const rootCauses = blockers
-        .filter((b) => {
-        const task = taskMap.get(b.taskId);
-        if (!task?.depends?.length)
-            return true;
-        return task.depends.every((depId) => {
-            const dep = taskMap.get(depId);
-            return !dep || completedStatuses.has(dep.status) || !blockerIds.has(depId);
-        });
-    })
-        .map((b) => b.taskId);
-    return {
-        taskId,
-        blockers,
-        rootCauses,
-        depth: maxDepthReached,
-    };
-}
-/**
- * Query brain_decisions for a specific task context.
- */
-async function findDecisionsForTask(accessor, taskId) {
-    return accessor.findDecisions({ contextTaskId: taskId });
-}
-/**
- * Find entries similar to a given brain.db entry.
- *
- * 1. Loads the source entry's text from brain.db.
- * 2. Calls searchSimilar() for vector-based similarity if embeddings exist.
- * 3. Falls back to FTS5 keyword search if no embeddings are available.
- * 4. Filters out the source entry itself.
- *
- * @param entryId - ID of the brain.db entry to find similar entries for
- * @param projectRoot - Project root directory
- * @param limit - Maximum results to return (default 10)
- * @returns Array of similar entries ranked by distance/relevance
- */
-export async function reasonSimilar(entryId, projectRoot, limit) {
-    const maxResults = limit ?? 10;
-    // Load the source entry's text — initialize brain.db before accessor use
-    const { getBrainDb } = await import('../store/brain-sqlite.js');
-    await getBrainDb(projectRoot);
-    const accessor = await getBrainAccessor(projectRoot);
-    let sourceText = null;
-    if (entryId.startsWith('D-') || /^D\d/.test(entryId)) {
-        const row = await accessor.getDecision(entryId);
-        if (row)
-            sourceText = `${row.decision} ${row.rationale}`;
-    }
-    else if (entryId.startsWith('P-') || /^P\d/.test(entryId)) {
-        const row = await accessor.getPattern(entryId);
-        if (row)
-            sourceText = `${row.pattern} ${row.context}`;
-    }
-    else if (entryId.startsWith('L-') || /^L\d/.test(entryId)) {
-        const row = await accessor.getLearning(entryId);
-        if (row)
-            sourceText = `${row.insight} ${row.source}`;
-    }
-    else {
-        const row = await accessor.getObservation(entryId);
-        if (row)
-            sourceText = row.narrative ?? row.title;
-    }
-    if (!sourceText)
-        return [];
-    // Try vector similarity first
-    const vecResults = await searchSimilar(sourceText, projectRoot, maxResults + 1);
-    if (vecResults.length > 0) {
-        return vecResults.filter((r) => r.id !== entryId).slice(0, maxResults);
-    }
-    // FTS5 fallback: extract key terms and search
-    const terms = sourceText
-        .split(/\s+/)
-        .filter((t) => t.length > 3)
-        .slice(0, 5)
-        .join(' ');
-    if (!terms)
-        return [];
-    const ftsResults = await searchBrain(projectRoot, terms, { limit: maxResults + 5 });
-    const entries = [];
-    for (const d of ftsResults.decisions) {
-        if (d.id === entryId)
-            continue;
-        entries.push({
-            id: d.id,
-            distance: 0,
-            type: 'decision',
-            title: d.decision,
-            text: `${d.decision} — ${d.rationale}`,
-        });
-    }
-    for (const p of ftsResults.patterns) {
-        if (p.id === entryId)
-            continue;
-        entries.push({
-            id: p.id,
-            distance: 0,
-            type: 'pattern',
-            title: p.pattern,
-            text: `${p.pattern} — ${p.context}`,
-        });
-    }
-    for (const l of ftsResults.learnings) {
-        if (l.id === entryId)
-            continue;
-        entries.push({
-            id: l.id,
-            distance: 0,
-            type: 'learning',
-            title: l.insight,
-            text: `${l.insight} (source: ${l.source})`,
-        });
-    }
-    for (const o of ftsResults.observations) {
-        if (o.id === entryId)
-            continue;
-        entries.push({
-            id: o.id,
-            distance: 0,
-            type: 'observation',
-            title: o.title,
-            text: o.narrative ?? o.title,
-        });
-    }
-    return entries.slice(0, maxResults);
-}
-//# sourceMappingURL=brain-reasoning.js.map

package/dist/memory/brain-reasoning.js.map

@@ -1 +0,0 @@
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