@cleocode/core 2026.4.29 → 2026.4.31

package/dist/internal.d.ts

@@ -12,6 +12,7 @@
  * @internal
  */
 export * from './index.js';
+export { batchParse, isTreeSitterAvailable, parseFile, type SmartSearchOptions, smartOutline, smartSearch, smartUnfold, } from '@cleocode/nexus';
 export { exportTasks } from './admin/export.js';
 export { exportTasksPackage } from './admin/export-tasks.js';
 export { computeHelp } from './admin/help.js';
@@ -22,12 +23,8 @@ export { listAdrs, showAdr, syncAdrsToDb, validateAllAdrs } from './adrs/index.j
 export type { AuditEntry } from './audit.js';
 export type { BackfillOptions, BackfillResult, BackfillTaskChange } from './backfill/index.js';
 export { backfillTasks, generateAcFromDescription } from './backfill/index.js';
-export type { BootstrapContext, BootstrapOptions } from './bootstrap.js';
-export { bootstrapGlobalCleo, installSkillsGlobally, } from './bootstrap.js';
-export { smartOutline } from './code/outline.js';
-export { batchParse, isTreeSitterAvailable, parseFile } from './code/parser.js';
-export { type SmartSearchOptions, smartSearch } from './code/search.js';
-export { smartUnfold } from './code/unfold.js';
+export type { BootstrapContext, BootstrapOptions, BootstrapVerificationResult, } from './bootstrap.js';
+export { bootstrapGlobalCleo, installSkillsGlobally, verifyBootstrapComplete, } from './bootstrap.js';
 export type { ViolationLogEntry } from './compliance/protocol-enforcement.js';
 export { ProtocolEnforcer, protocolEnforcer } from './compliance/protocol-enforcement.js';
 export type { ProtocolRule, ProtocolValidationResult, ProtocolViolation, RequirementLevel, ViolationSeverity, } from './compliance/protocol-rules.js';
@@ -48,14 +45,19 @@ export { addChain, advanceInstance, createInstance, listChains, showChain, } fro
 export { buildStageGuidance, checkGate, checkStagePrerequisites, failGate, formatStageGuidance, getLifecycleGates, getLifecycleHistory, getLifecycleStatus, getStagePrerequisites, isValidStage, listEpicsWithLifecycle, PIPELINE_STAGES, passGate, recordStageProgress, renderStageGuidance, resetStage, STAGE_SKILL_MAP, type Stage, type StageGuidance, skipStageWithReason, TIER_0_SKILLS, } from './lifecycle/index.js';
 export { STAGE_DEFINITIONS } from './lifecycle/stages.js';
 export { instantiateTessera, showTessera } from './lifecycle/tessera-engine.js';
+export type { BrainBackfillResult } from './memory/brain-backfill.js';
+export { backfillBrainGraph } from './memory/brain-backfill.js';
 export type { ConsolidationResult, DecayResult } from './memory/brain-lifecycle.js';
 export { applyTemporalDecay, consolidateMemories } from './memory/brain-lifecycle.js';
 export type { BrainMaintenanceConsolidationResult, BrainMaintenanceDecayResult, BrainMaintenanceEmbeddingsResult, BrainMaintenanceOptions, BrainMaintenanceReconciliationResult, BrainMaintenanceResult, } from './memory/brain-maintenance.js';
 export { runBrainMaintenance } from './memory/brain-maintenance.js';
+export type { PurgeResult } from './memory/brain-purge.js';
+export { purgeBrainNoise } from './memory/brain-purge.js';
 export type { PopulateEmbeddingsOptions, PopulateEmbeddingsResult, } from './memory/brain-retrieval.js';
 export { populateEmbeddings } from './memory/brain-retrieval.js';
 export { migrateClaudeMem } from './memory/claude-mem-migration.js';
-export { memoryBrainStats, memoryContradictions, memoryDecisionFind, memoryDecisionStore, memoryFetch, memoryFind, memoryGraphAdd, memoryGraphNeighbors, memoryGraphRemove, memoryGraphShow, memoryLearningFind, memoryLearningStats, memoryLearningStore, memoryLink, memoryObserve, memoryPatternFind, memoryPatternStats, memoryPatternStore, memoryReasonSimilar, memoryReasonWhy, memorySearchHybrid, memoryShow, memorySuperseded, memoryTimeline, memoryUnlink, } from './memory/engine-compat.js';
+export { memoryBrainStats, memoryContradictions, memoryDecisionFind, memoryDecisionStore, memoryFetch, memoryFind, memoryGraphAdd, memoryGraphContext, memoryGraphNeighbors, memoryGraphRelated, memoryGraphRemove, memoryGraphShow, memoryGraphStatsFull, memoryGraphTrace, memoryLearningFind, memoryLearningStats, memoryLearningStore, memoryLink, memoryObserve, memoryPatternFind, memoryPatternStats, memoryPatternStore, memoryReasonSimilar, memoryReasonWhy, memorySearchHybrid, memoryShow, memorySuperseded, memoryTimeline, memoryUnlink, } from './memory/engine-compat.js';
+export type { GraphStats, NodeContext, RelatedNode, TraceNode, } from './memory/graph-queries.js';
 export { pipelineManifestAppend, pipelineManifestArchive, pipelineManifestFind, pipelineManifestList, pipelineManifestPending, pipelineManifestShow, pipelineManifestStats, readManifestEntries, } from './memory/pipeline-manifest-sqlite.js';
 export { autoRecordDispatchTokenUsage, clearTokenUsage, deleteTokenUsage, listTokenUsage, measureTokenExchange, recordTokenExchange, showTokenUsage, summarizeTokenUsage, } from './metrics/token-service.js';
 export { blockingAnalysis, buildGlobalGraph, criticalPath, nexusDeps, orphanDetection, } from './nexus/deps.js';
@@ -149,6 +151,7 @@ export type { BackupEntry, BackupResult, RestoreResult } from './system/backup.j
 export { listSystemBackups, restoreBackup } from './system/backup.js';
 export type { CleanupResult } from './system/cleanup.js';
 export { cleanupSystem } from './system/cleanup.js';
+export { checkAllDependencies, checkDependency, getDependencySpecs, } from './system/dependencies.js';
 export type { DiagnosticsResult, HealthResult } from './system/health.js';
 export { getSystemDiagnostics, getSystemHealth, startupHealthCheck } from './system/health.js';
 export type { InjectGenerateResult, LabelsResult, RuntimeDiagnostics, SafestopResult, SystemMetricsResult, UncancelResult, } from './system/index.js';

package/dist/internal.d.ts.map

@@ -1 +1 @@
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package/dist/lib/tree-sitter-languages.d.ts

@@ -1,29 +1,33 @@
 /**
  * Tree-sitter language detection and grammar resolution.
  *
- * Maps file extensions to tree-sitter grammar packages for use by
- * the Smart Explore code analysis pipeline.
+ * Maps file extensions to tree-sitter language identifiers used by
+ * the Smart Explore code analysis pipeline (outline, search, unfold).
+ * Grammar loading is handled internally by parser.ts via native Node bindings.
  *
- * @task T148
+ * @task T509
  */
 /** Supported tree-sitter language identifiers. */
 export type TreeSitterLanguage = 'typescript' | 'tsx' | 'javascript' | 'python' | 'go' | 'rust' | 'java' | 'c' | 'cpp' | 'ruby';
 /**
- * Detect tree-sitter language from a file path.
+ * Detect tree-sitter language from a file path or file name.
  *
- * @param filePath - Path to a source file
+ * @param filePath - Path to a source file (or bare file name)
  * @returns The detected language, or undefined if unsupported
  */
 export declare function detectLanguage(filePath: string): TreeSitterLanguage | undefined;
 /**
  * Get the npm grammar package name for a language.
  *
+ * The package name matches the native Node binding that parser.ts loads
+ * via {@link createRequire}. Useful for diagnostics and install hints.
+ *
  * @param language - A tree-sitter language identifier
  * @returns The npm package name containing the grammar
  */
 export declare function grammarPackage(language: TreeSitterLanguage): string;
-/** All supported file extensions. */
+/** All supported file extensions (without leading dot). */
 export declare const SUPPORTED_EXTENSIONS: string[];
-/** All supported languages. */
+/** All supported languages (deduplicated). */
 export declare const SUPPORTED_LANGUAGES: TreeSitterLanguage[];
 //# sourceMappingURL=tree-sitter-languages.d.ts.map

package/dist/lib/tree-sitter-languages.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"tree-sitter-languages.d.ts","sourceRoot":"","sources":["../../src/lib/tree-sitter-languages.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,kDAAkD;AAClD,MAAM,MAAM,kBAAkB,GAC1B,YAAY,GACZ,KAAK,GACL,YAAY,GACZ,QAAQ,GACR,IAAI,GACJ,MAAM,GACN,MAAM,GACN,GAAG,GACH,KAAK,GACL,MAAM,CAAC;AAyCX;;;;;GAKG;AACH,wBAAgB,cAAc,CAAC,QAAQ,EAAE,MAAM,GAAG,kBAAkB,GAAG,SAAS,CAI/E;AAED;;;;;GAKG;AACH,wBAAgB,cAAc,CAAC,QAAQ,EAAE,kBAAkB,GAAG,MAAM,CAEnE;AAED,qCAAqC;AACrC,eAAO,MAAM,oBAAoB,UAA6B,CAAC;AAE/D,+BAA+B;AAC/B,eAAO,MAAM,mBAAmB,EAAE,kBAAkB,EAA+C,CAAC"}
+{"version":3,"file":"tree-sitter-languages.d.ts","sourceRoot":"","sources":["../../src/lib/tree-sitter-languages.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,kDAAkD;AAClD,MAAM,MAAM,kBAAkB,GAC1B,YAAY,GACZ,KAAK,GACL,YAAY,GACZ,QAAQ,GACR,IAAI,GACJ,MAAM,GACN,MAAM,GACN,GAAG,GACH,KAAK,GACL,MAAM,CAAC;AAyCX;;;;;GAKG;AACH,wBAAgB,cAAc,CAAC,QAAQ,EAAE,MAAM,GAAG,kBAAkB,GAAG,SAAS,CAI/E;AAED;;;;;;;;GAQG;AACH,wBAAgB,cAAc,CAAC,QAAQ,EAAE,kBAAkB,GAAG,MAAM,CAEnE;AAED,2DAA2D;AAC3D,eAAO,MAAM,oBAAoB,UAA6B,CAAC;AAE/D,8CAA8C;AAC9C,eAAO,MAAM,mBAAmB,EAAE,kBAAkB,EAA+C,CAAC"}

package/dist/memory/auto-extract.d.ts

@@ -1,31 +1,43 @@
 /**
  * Auto-extract structured memory entries from task completions and session ends.
  *
- * Best-effort extraction: all functions wrap their logic in try/catch and
- * must never throw — memory extraction must never block the calling flow.
+ * NOTE: The two primary extraction functions in this module —
+ * `extractTaskCompletionMemory` and `extractSessionEndMemory` — have been
+ * intentionally disabled per T523 CA1 specification to eliminate O(tasks×labels)
+ * noise in brain.db. Only `resolveTaskDetails` and `extractFromTranscript`
+ * remain active.
  *
- * @task T-auto-extract
- * @epic T5149
+ * @task T526
+ * @epic T523
  */
 import type { Task } from '@cleocode/contracts';
 import type { SessionBridgeData } from '../sessions/session-memory-bridge.js';
 /**
- * Extract and store memory entries when a task is completed.
+ * Intentionally disabled per T523 CA1 specification.
  *
- * - Always stores a learning for the completed task.
- * - Stores a second learning if the task had dependencies.
- * - Detects recurring label patterns across recent completed tasks
- *   and stores a success pattern when any label appears 3+ times.
+ * Previously auto-generated "Completed: <title>" learnings and
+ * "Recurring label X seen in N completed tasks" patterns on every
+ * task completion. This created O(tasks x labels) noise with no
+ * deduplication, resulting in 2,466 duplicate patterns and 327
+ * duplicate learnings in brain.db (96.7% noise ratio).
+ *
+ * Pattern detection is now handled by `cleo brain maintenance`
+ * which runs deduplication-aware analysis on a schedule.
+ *
+ * @see .cleo/agent-outputs/T523-CA1-brain-integrity-spec.md
  */
-export declare function extractTaskCompletionMemory(projectRoot: string, task: Task, _parentTask?: Task): Promise<void>;
+export declare function extractTaskCompletionMemory(_projectRoot: string, _task: Task, _parentTask?: Task): Promise<void>;
 /**
- * Extract and store memory entries when a session ends.
+ * Intentionally disabled per T523 CA1 specification.
+ *
+ * Previously auto-generated session summary decisions, duplicate
+ * "Completed:" learnings, and workflow patterns on session end.
+ * These duplicated data already stored in the sessions table and
+ * task records, adding no signal to brain.db.
  *
- * - Stores a process decision summarising the session.
- * - Stores a per-task learning for each completed task.
- * - Stores a workflow pattern when 2+ completed tasks share a label.
+ * @see .cleo/agent-outputs/T523-CA1-brain-integrity-spec.md
  */
-export declare function extractSessionEndMemory(projectRoot: string, sessionData: SessionBridgeData, taskDetails: Task[]): Promise<void>;
+export declare function extractSessionEndMemory(_projectRoot: string, _sessionData: SessionBridgeData, _taskDetails: Task[]): Promise<void>;
 /**
  * Resolve an array of task IDs to their full Task objects.
  * Tasks that cannot be found are silently excluded.

package/dist/memory/auto-extract.d.ts.map

@@ -1 +1 @@
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package/dist/memory/brain-backfill.d.ts

@@ -0,0 +1,59 @@
+/**
+ * Brain graph back-fill — populates brain_page_nodes and brain_page_edges from
+ * existing typed table rows (decisions, patterns, learnings, observations,
+ * sticky notes).
+ *
+ * Each row in a typed table gets a corresponding node in brain_page_nodes.
+ * Relationship edges are derived from:
+ *   - decision.contextTaskId / contextEpicId  → applies_to edges
+ *   - observation.sourceSessionId             → produced_by edge
+ *   - observation text referencing task IDs   → applies_to edges
+ *   - pattern entries                         → derived_from stubs
+ *
+ * Stub nodes (task:<id>, session:<id>, epic:<id>) are created for referenced
+ * external entities so edges have valid targets.
+ *
+ * Duplicate nodes are silently skipped (INSERT OR IGNORE semantics via
+ * Drizzle onConflictDoNothing).
+ *
+ * @task T530
+ * @epic T523
+ */
+/** Result returned by backfillBrainGraph. */
+export interface BrainBackfillResult {
+    /** Counts before the back-fill ran. */
+    before: {
+        nodes: number;
+        edges: number;
+        decisions: number;
+        patterns: number;
+        learnings: number;
+        observations: number;
+        stickyNotes: number;
+    };
+    /** Counts after the back-fill ran. */
+    after: {
+        nodes: number;
+        edges: number;
+    };
+    /** Number of nodes inserted during this run. */
+    nodesInserted: number;
+    /** Number of edges inserted during this run. */
+    edgesInserted: number;
+    /** Number of stub nodes created for external references (tasks, sessions, epics). */
+    stubsCreated: number;
+    /** Node counts broken down by type. */
+    byType: Record<string, number>;
+}
+/**
+ * Back-fill brain_page_nodes and brain_page_edges from all existing typed rows
+ * in brain.db.
+ *
+ * Safe to run multiple times — duplicate nodes and edges are silently ignored
+ * via INSERT OR IGNORE semantics.
+ *
+ * @param projectRoot - Absolute path to the project root (contains .cleo/).
+ * @returns BackfillResult with before/after counts and insertion stats.
+ */
+export declare function backfillBrainGraph(projectRoot: string): Promise<BrainBackfillResult>;
+//# sourceMappingURL=brain-backfill.d.ts.map

package/dist/memory/brain-backfill.d.ts.map

@@ -0,0 +1 @@
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package/dist/memory/brain-purge.d.ts

@@ -0,0 +1,51 @@
+/**
+ * Brain.db noise purge utility — removes 2927 noise entries leaving ~57 signal entries.
+ *
+ * Purge rules:
+ * - Patterns: keep newest per unique pattern text (dedup), delete duplicates
+ * - Learnings: delete ALL (all are auto-generated task completion noise)
+ * - Decisions: delete ALL except D-mntpeeer (the one real architectural decision)
+ * - Observations: delete task-start/task-complete/session-note/test/junk noise
+ *
+ * Safety: requires backup to exist before calling. Never touches tasks.db.
+ *
+ * @task T524
+ * @epic T523
+ */
+/** Result counts from a purge run. */
+export interface PurgeResult {
+    /** Number of pattern rows deleted. */
+    patternsDeleted: number;
+    /** Number of learning rows deleted. */
+    learningsDeleted: number;
+    /** Number of decision rows deleted. */
+    decisionsDeleted: number;
+    /** Number of observation rows deleted. */
+    observationsDeleted: number;
+    /** Counts after purge. */
+    after: {
+        patterns: number;
+        learnings: number;
+        decisions: number;
+        observations: number;
+    };
+    /** FTS5 indexes rebuilt. */
+    fts5Rebuilt: boolean;
+}
+/**
+ * Execute the brain.db noise purge.
+ *
+ * Deletes ~2927 noise entries across four tables, leaving ~57 signal entries.
+ * The one real architectural decision (D-mntpeeer) is explicitly preserved.
+ *
+ * Rules applied in order:
+ * 1. Patterns: deduplicate by pattern text — keep newest per unique text, delete older dupes
+ * 2. Learnings: delete all (100% noise — auto-generated "Completed:" and dependency notices)
+ * 3. Decisions: delete all except D-mntpeeer
+ * 4. Observations: delete task-start, task-complete, session-note, and test/junk entries
+ *
+ * @param projectRoot - Absolute path to the project root (e.g. /mnt/projects/cleocode)
+ * @returns PurgeResult with before/after counts and FTS5 status
+ */
+export declare function purgeBrainNoise(projectRoot: string): Promise<PurgeResult>;
+//# sourceMappingURL=brain-purge.d.ts.map

package/dist/memory/brain-purge.d.ts.map

@@ -0,0 +1 @@
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package/dist/memory/brain-retrieval.d.ts.map

@@ -1 +1 @@
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package/dist/memory/brain-search.d.ts.map

@@ -1 +1 @@
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package/dist/memory/decisions.d.ts.map

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package/dist/memory/engine-compat.d.ts

@@ -490,6 +490,77 @@ export declare function memorySearchHybrid(params: {
     graphWeight?: number;
     limit?: number;
 }, projectRoot?: string): Promise<EngineResult>;
+/**
+ * BFS traversal of the brain knowledge graph from a seed node.
+ *
+ * @param params - Traversal parameters: nodeId and optional maxDepth (default 3)
+ * @param projectRoot - Optional project root path; defaults to resolved root
+ * @returns EngineResult with traversal nodes annotated with depth
+ *
+ * @remarks
+ * Uses a recursive CTE against brain_page_nodes / brain_page_edges.
+ * Follows edges bidirectionally. Returns the seed node at depth 0.
+ *
+ * @example
+ * ```typescript
+ * const result = await memoryGraphTrace({ nodeId: 'decision:D-abc123', maxDepth: 2 }, '/project');
+ * ```
+ */
+export declare function memoryGraphTrace(params: {
+    nodeId: string;
+    maxDepth?: number;
+}, projectRoot?: string): Promise<EngineResult>;
+/**
+ * Return the immediate (1-hop) neighbours of a brain graph node.
+ *
+ * @param params - Parameters: nodeId, optional edgeType filter
+ * @param projectRoot - Optional project root path; defaults to resolved root
+ * @returns EngineResult with neighbour nodes and edge metadata
+ *
+ * @remarks
+ * Follows edges in both directions. Results include direction ('in'/'out'),
+ * edge type, and weight.
+ *
+ * @example
+ * ```typescript
+ * const result = await memoryGraphRelated({ nodeId: 'decision:D-abc123', edgeType: 'applies_to' }, '/project');
+ * ```
+ */
+export declare function memoryGraphRelated(params: {
+    nodeId: string;
+    edgeType?: string;
+}, projectRoot?: string): Promise<EngineResult>;
+/**
+ * Return a 360-degree context view of a single brain graph node.
+ *
+ * @param params - Parameters: nodeId
+ * @param projectRoot - Optional project root path; defaults to resolved root
+ * @returns EngineResult with the node, all edges, and neighbouring nodes
+ *
+ * @remarks
+ * Includes the node itself, in-edges, out-edges, and all immediately
+ * reachable neighbour nodes with their edge relationships.
+ *
+ * @example
+ * ```typescript
+ * const result = await memoryGraphContext({ nodeId: 'decision:D-abc123' }, '/project');
+ * ```
+ */
+export declare function memoryGraphContext(params: {
+    nodeId: string;
+}, projectRoot?: string): Promise<EngineResult>;
+/**
+ * Return aggregate statistics for the brain knowledge graph.
+ *
+ * @param projectRoot - Optional project root path; defaults to resolved root
+ * @returns EngineResult with node counts by type, edge counts by type, and totals
+ *
+ * @example
+ * ```typescript
+ * const result = await memoryGraphStatsFull('/project');
+ * ```
+ */
+export declare function memoryGraphStatsFull(projectRoot?: string): Promise<EngineResult>;
 /**
  * Remove a node or edge from the PageIndex graph.
  *

package/dist/memory/engine-compat.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"engine-compat.d.ts","sourceRoot":"","sources":["../../src/memory/engine-compat.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AAGH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AAcxD,OAAO,EAEL,KAAK,oBAAoB,EACzB,KAAK,mBAAmB,EAGzB,MAAM,gBAAgB,CAAC;AAIxB,OAAO,EAEL,KAAK,mBAAmB,EACxB,KAAK,kBAAkB,EAGxB,MAAM,eAAe,CAAC;AA+BvB;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,UAAU,CAAC,OAAO,EAAE,MAAM,EAAE,WAAW,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,YAAY,CAAC,CA2E7F;AAMD;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,gBAAgB,CAAC,WAAW,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,YAAY,CAAC,CAqDlF;AAMD;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,kBAAkB,CACtC,MAAM,EAAE;IAAE,KAAK,CAAC,EAAE,MAAM,CAAC;IAAC,MAAM,CAAC,EAAE,MAAM,CAAC;IAAC,KAAK,CAAC,EAAE,MAAM,CAAA;CAAE,EAC3D,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CA2CvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,mBAAmB,CACvC,MAAM,EAAE;IACN,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,EAAE,MAAM,CAAC;IAClB,YAAY,CAAC,EAAE,MAAM,EAAE,CAAC;IACxB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB,EACD,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAiDvB;AAMD;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,UAAU,CAC9B,MAAM,EAAE;IACN,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,EAAE,CAAC;IAClB,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,yEAAyE;IACzE,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB,EACD,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAuBvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,cAAc,CAClC,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,WAAW,CAAC,EAAE,MAAM,CAAC;IAAC,UAAU,CAAC,EAAE,MAAM,CAAA;CAAE,EACrE,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAkBvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,WAAW,CAC/B,MAAM,EAAE;IAAE,GAAG,EAAE,MAAM,EAAE,CAAA;CAAE,EACzB,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAcvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,aAAa,CACjC,MAAM,EAAE;IACN,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,qFAAqF;IACrF,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB,EACD,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAoCvB;AAMD;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,kBAAkB,CACtC,MAAM,EAAE,kBAAkB,EAC1B,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAcvB;AAED;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,iBAAiB,CACrC,MAAM,EAAE,mBAAmB,EAC3B,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAcvB;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAsB,kBAAkB,CAAC,WAAW,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,YAAY,CAAC,CAcpF;AAMD;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,mBAAmB,CACvC,MAAM,EAAE,mBAAmB,EAC3B,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAcvB;AAED;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,kBAAkB,CACtC,MAAM,EAAE,oBAAoB,EAC5B,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAcvB;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAsB,mBAAmB,CAAC,WAAW,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,YAAY,CAAC,CAcrF;AAMD;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,oBAAoB,CAAC,WAAW,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,YAAY,CAAC,CAmLtF;AAED;;;;;;;;;;;;;;;;;;;;;;;GAuBG;AACH,wBAAsB,gBAAgB,CACpC,MAAM,CAAC,EAAE;IAAE,IAAI,CAAC,EAAE,MAAM,CAAC;IAAC,OAAO,CAAC,EAAE,MAAM,CAAA;CAAE,EAC5C,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAyKvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,UAAU,CAC9B,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,OAAO,EAAE,MAAM,CAAA;CAAE,EAC3C,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAgCvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,YAAY,CAChC,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,OAAO,EAAE,MAAM,CAAA;CAAE,EAC3C,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAgCvB;AAMD;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,cAAc,CAClC,MAAM,EAAE;IACN,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB,EACD,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CA8CvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,eAAe,CACnC,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,CAAA;CAAE,EAC1B,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CA4BvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,oBAAoB,CACxC,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;CAAE,EAC7C,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAyBvB;AAMD;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,eAAe,CACnC,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,CAAA;CAAE,EAC1B,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAoBvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,mBAAmB,CACvC,MAAM,EAAE;IAAE,OAAO,EAAE,MAAM,CAAC;IAAC,KAAK,CAAC,EAAE,MAAM,CAAA;CAAE,EAC3C,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAmBvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,kBAAkB,CACtC,MAAM,EAAE;IACN,KAAK,EAAE,MAAM,CAAC;IACd,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB,EACD,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CAwBvB;AAMD;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,gBAAgB,CACpC,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;CAAE,EAC7C,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,CAAC,YAAY,CAAC,CA2BvB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,kBAAkB,CACtC,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;CAAE,EAC7C,WAAW,CAAC,EAAE,MAAM,GACnB,OAAO,C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package/dist/memory/graph-auto-populate.d.ts

@@ -0,0 +1,65 @@
+/**
+ * Graph auto-population helpers for CLEO BRAIN.
+ *
+ * Provides upsertGraphNode and addGraphEdge helpers that write to the
+ * brain_page_nodes and brain_page_edges tables whenever memory entries
+ * are created via the legitimate write paths (storeDecision, observeBrain,
+ * storePattern, storeLearning, and task completion).
+ *
+ * Design constraints:
+ * - All writes are BEST-EFFORT — never block or fail the primary operation.
+ * - All writes are gated on brain.autoCapture via isAutoCaptureEnabled.
+ * - Uses INSERT OR REPLACE (onConflictDoUpdate) for upsert semantics.
+ * - Edge inserts are idempotent via the composite PK (fromId, toId, edgeType).
+ *
+ * @task T537
+ * @epic T523
+ */
+import type { BrainEdgeType, BrainNodeType } from '../store/brain-schema.js';
+export type { BrainEdgeType, BrainNodeType };
+/**
+ * Upsert a graph node for a typed table entry.
+ *
+ * Uses INSERT OR REPLACE to handle both new and existing entries. If the
+ * node already exists (same id), its label, qualityScore, lastActivityAt,
+ * updatedAt, and metadataJson are refreshed while createdAt is preserved.
+ *
+ * The contentHash is derived from a SHA-256 prefix of the canonical content.
+ * External-reference nodes (task, session, epic) may pass an empty string for
+ * content; their hash will be null so duplicates are not rejected.
+ *
+ * This function is gated on brain.autoCapture. If the gate is disabled or any
+ * error occurs, it returns silently without throwing.
+ *
+ * @param projectRoot - Absolute path to the project root directory.
+ * @param nodeId - Stable composite ID in the form '<type>:<source-id>'.
+ * @param nodeType - Discriminated type from BRAIN_NODE_TYPES.
+ * @param label - Human-readable label (title, task ID, etc.).
+ * @param qualityScore - 0.0 (noise) to 1.0 (canonical).
+ * @param content - Canonical text used to derive the content hash.
+ * @param metadata - Optional type-specific metadata blob.
+ *
+ * @task T537
+ */
+export declare function upsertGraphNode(projectRoot: string, nodeId: string, nodeType: BrainNodeType, label: string, qualityScore: number, content: string, metadata?: Record<string, unknown>): Promise<void>;
+/**
+ * Add a directed, typed edge between two graph nodes (idempotent).
+ *
+ * The composite primary key (fromId, toId, edgeType) prevents duplicate edges
+ * of the same type. Conflicting rows are ignored so this is safe to call
+ * multiple times with the same arguments.
+ *
+ * This function is gated on brain.autoCapture. If the gate is disabled or any
+ * error occurs, it returns silently without throwing.
+ *
+ * @param projectRoot - Absolute path to the project root directory.
+ * @param fromId - Source node ID (brain_page_nodes.id).
+ * @param toId - Target node ID (brain_page_nodes.id or external nexus ID).
+ * @param edgeType - Typed relationship from BRAIN_EDGE_TYPES.
+ * @param weight - Edge confidence/weight (0.0–1.0). Defaults to 1.0.
+ * @param provenance - Human-readable note on why this edge was emitted.
+ *
+ * @task T537
+ */
+export declare function addGraphEdge(projectRoot: string, fromId: string, toId: string, edgeType: BrainEdgeType, weight?: number, provenance?: string): Promise<void>;
+//# sourceMappingURL=graph-auto-populate.d.ts.map

package/dist/memory/graph-auto-populate.d.ts.map

@@ -0,0 +1 @@
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