@cleocode/core 2026.3.65 → 2026.3.66

package/dist/validation/doctor/checks.js

@@ -1,1069 +0,0 @@
-/**
- * Doctor health checks - ported from lib/validation/doctor-checks.sh
- *
- * Global health check functions: CLI installation, version, docs accessibility,
- * agent configs, registered projects, injection files, and aliases.
- *
- * @task T4525
- * @epic T4454
- */
-import { execFileSync } from 'node:child_process';
-import { accessSync, constants, existsSync, readFileSync, statSync } from 'node:fs';
-import { homedir } from 'node:os';
-import { join } from 'node:path';
-import { CORE_PROTECTED_FILES } from '../../constants.js';
-import { detectLegacyAgentOutputs } from '../../migration/agent-outputs.js';
-import { getCleoHome } from '../../paths.js';
-import { getNodeUpgradeInstructions, getNodeVersionInfo, MINIMUM_NODE_MAJOR, } from '../../platform.js';
-import { getGitignoreContent } from '../../scaffold.js';
-import { checkGlobalSchemas as checkGlobalSchemasRaw } from '../../schema-management.js';
-// ============================================================================
-// Check 1: CLI Installation
-// ============================================================================
-/** @task T4525 */
-export function checkCliInstallation(cleoHome = getCleoHome()) {
-    const exists = existsSync(cleoHome);
-    return {
-        id: 'cli_installation',
-        category: 'installation',
-        status: exists ? 'passed' : 'failed',
-        message: exists
-            ? `CLEO installation found at ${cleoHome}`
-            : `CLEO installation not found at ${cleoHome}`,
-        details: { path: cleoHome, exists },
-        fix: exists ? null : 'Run install.sh to install CLEO globally',
-    };
-}
-// ============================================================================
-// Check 2: CLI Version
-// ============================================================================
-/** Matches X.Y.Z (semver) and YYYY.M.patch (CalVer). */
-const VERSION_REGEX = /^\d+\.\d+\.\d+$/;
-/** @task T4525 */
-export function checkCliVersion(cleoHome = getCleoHome()) {
-    const versionFile = join(cleoHome, 'VERSION');
-    if (!existsSync(versionFile)) {
-        return {
-            id: 'cli_version',
-            category: 'installation',
-            status: 'failed',
-            message: 'VERSION file not found',
-            details: { path: versionFile, exists: false },
-            fix: 'Run install.sh to reinstall CLEO',
-        };
-    }
-    const version = readFileSync(versionFile, 'utf-8').trim().split('\n')[0].trim();
-    const valid = VERSION_REGEX.test(version);
-    return {
-        id: 'cli_version',
-        category: 'installation',
-        status: valid ? 'passed' : 'failed',
-        message: valid ? `Valid CLI version: ${version}` : `Invalid VERSION format: '${version}'`,
-        details: { version, valid, ...(valid ? {} : { expected: 'X.Y.Z or YYYY.M.patch (CalVer)' }) },
-        fix: valid ? null : 'Run install.sh to reinstall CLEO',
-    };
-}
-// ============================================================================
-// Check 3: Docs Accessibility
-// ============================================================================
-/** @task T4525 */
-export function checkDocsAccessibility(cleoHome = getCleoHome()) {
-    const docsFile = join(cleoHome, 'templates', 'CLEO-INJECTION.md');
-    if (!existsSync(docsFile)) {
-        return {
-            id: 'docs_accessibility',
-            category: 'installation',
-            status: 'failed',
-            message: 'Task management documentation not found',
-            details: { path: docsFile, exists: false },
-            fix: 'Run install.sh to reinstall CLEO documentation',
-        };
-    }
-    try {
-        accessSync(docsFile, constants.R_OK);
-    }
-    catch {
-        return {
-            id: 'docs_accessibility',
-            category: 'installation',
-            status: 'failed',
-            message: 'Task management documentation not readable',
-            details: { path: docsFile, readable: false },
-            fix: `chmod +r ${docsFile}`,
-        };
-    }
-    const size = statSync(docsFile).size;
-    return {
-        id: 'docs_accessibility',
-        category: 'installation',
-        status: 'passed',
-        message: 'Task management documentation accessible',
-        details: { path: docsFile, readable: true, size },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check 7: @ Reference Resolution
-// ============================================================================
-/** @task T4525 */
-export function checkAtReferenceResolution(cleoHome = getCleoHome()) {
-    const docsFile = join(cleoHome, 'templates', 'CLEO-INJECTION.md');
-    const reference = '@~/.cleo/templates/CLEO-INJECTION.md';
-    if (!existsSync(docsFile)) {
-        return {
-            id: 'at_reference_resolution',
-            category: 'configuration',
-            status: 'failed',
-            message: '@ reference target does not exist',
-            details: { reference, path: docsFile, exists: false },
-            fix: 'Run install.sh to reinstall CLEO documentation',
-        };
-    }
-    try {
-        accessSync(docsFile, constants.R_OK);
-        const content = readFileSync(docsFile, 'utf-8');
-        const firstLine = content.split('\n')[0] ?? '';
-        if (!firstLine) {
-            return {
-                id: 'at_reference_resolution',
-                category: 'configuration',
-                status: 'warning',
-                message: '@ reference target is empty',
-                details: { reference, path: docsFile, empty: true },
-                fix: 'Run install.sh to reinstall CLEO documentation',
-            };
-        }
-        const size = statSync(docsFile).size;
-        return {
-            id: 'at_reference_resolution',
-            category: 'configuration',
-            status: 'passed',
-            message: '@ reference resolution successful',
-            details: { reference, path: docsFile, readable: true, size },
-            fix: null,
-        };
-    }
-    catch {
-        return {
-            id: 'at_reference_resolution',
-            category: 'configuration',
-            status: 'failed',
-            message: '@ reference target not readable',
-            details: { reference, path: docsFile, readable: false },
-            fix: `chmod +r ${docsFile}`,
-        };
-    }
-}
-// ============================================================================
-// Check: AGENTS.md injection hub
-// ============================================================================
-/**
- * Check that AGENTS.md exists in project root and contains the CAAMP:START marker,
- * indicating it serves as the injection hub for CLEO protocol content.
- */
-export function checkAgentsMdHub(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const agentsMdPath = join(root, 'AGENTS.md');
-    if (!existsSync(agentsMdPath)) {
-        return {
-            id: 'agents_md_hub',
-            category: 'configuration',
-            status: 'warning',
-            message: 'AGENTS.md not found in project root',
-            details: { path: agentsMdPath, exists: false },
-            fix: 'cleo upgrade',
-        };
-    }
-    let content;
-    try {
-        content = readFileSync(agentsMdPath, 'utf-8');
-    }
-    catch {
-        return {
-            id: 'agents_md_hub',
-            category: 'configuration',
-            status: 'warning',
-            message: 'AGENTS.md exists but is not readable',
-            details: { path: agentsMdPath, readable: false },
-            fix: `chmod +r ${agentsMdPath}`,
-        };
-    }
-    if (!content.includes('CAAMP:START')) {
-        return {
-            id: 'agents_md_hub',
-            category: 'configuration',
-            status: 'warning',
-            message: 'AGENTS.md exists but has no CAAMP:START marker',
-            details: { path: agentsMdPath, hasCaampMarker: false },
-            fix: 'cleo upgrade',
-        };
-    }
-    return {
-        id: 'agents_md_hub',
-        category: 'configuration',
-        status: 'passed',
-        message: 'AGENTS.md hub with CAAMP injection found',
-        details: { path: agentsMdPath, hasCaampMarker: true },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: Root .gitignore blocking .cleo/
-// ============================================================================
-/**
- * Check if project root .gitignore is blocking the entire .cleo/ directory.
- * This prevents core CLEO data from being tracked by git.
- * @task T4641
- * @epic T4637
- */
-export function checkRootGitignore(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const gitignorePath = join(root, '.gitignore');
-    if (!existsSync(gitignorePath)) {
-        return {
-            id: 'root_gitignore',
-            category: 'configuration',
-            status: 'passed',
-            message: 'No root .gitignore found (no conflict)',
-            details: { path: gitignorePath, exists: false },
-            fix: null,
-        };
-    }
-    let content;
-    try {
-        content = readFileSync(gitignorePath, 'utf-8');
-    }
-    catch {
-        return {
-            id: 'root_gitignore',
-            category: 'configuration',
-            status: 'warning',
-            message: 'Could not read root .gitignore',
-            details: { path: gitignorePath, readable: false },
-            fix: null,
-        };
-    }
-    const lines = content.split('\n');
-    const blockingLines = lines.filter((line) => {
-        const trimmed = line.trim();
-        if (trimmed.startsWith('#') || trimmed === '')
-            return false;
-        return /^\/?\.cleo\/?(\*)?$/.test(trimmed);
-    });
-    if (blockingLines.length > 0) {
-        return {
-            id: 'root_gitignore',
-            category: 'configuration',
-            status: 'warning',
-            message: `.cleo/ is ignored in root .gitignore. Run 'cleo init' to fix.`,
-            details: { path: gitignorePath, blockingLines },
-            fix: `cleo init`,
-        };
-    }
-    return {
-        id: 'root_gitignore',
-        category: 'configuration',
-        status: 'passed',
-        message: 'Root .gitignore does not block .cleo/',
-        details: { path: gitignorePath },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: .cleo/.gitignore integrity
-// ============================================================================
-/**
- * Check if .cleo/.gitignore exists and matches the template.
- * @task T4700
- */
-export function checkCleoGitignore(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const gitignorePath = join(root, '.cleo', '.gitignore');
-    if (!existsSync(gitignorePath)) {
-        return {
-            id: 'cleo_gitignore',
-            category: 'configuration',
-            status: 'warning',
-            message: '.cleo/.gitignore not found',
-            details: { path: gitignorePath, exists: false },
-            fix: 'cleo init --force',
-        };
-    }
-    // Load installed content
-    let installedContent;
-    try {
-        installedContent = readFileSync(gitignorePath, 'utf-8');
-    }
-    catch {
-        return {
-            id: 'cleo_gitignore',
-            category: 'configuration',
-            status: 'warning',
-            message: '.cleo/.gitignore exists but is not readable',
-            details: { path: gitignorePath, readable: false },
-            fix: `chmod +r ${gitignorePath}`,
-        };
-    }
-    // Load template from shared scaffold module (replaces CLI init.js require anti-pattern)
-    let templateContent = null;
-    try {
-        templateContent = getGitignoreContent();
-    }
-    catch {
-        // If we can't load the shared module, try the file directly
-        try {
-            const templatePaths = [
-                join(root, 'templates', 'cleo-gitignore'),
-                join(getCleoHome(), 'templates', 'cleo-gitignore'),
-            ];
-            for (const tp of templatePaths) {
-                if (existsSync(tp)) {
-                    templateContent = readFileSync(tp, 'utf-8');
-                    break;
-                }
-            }
-        }
-        catch {
-            // Can't load template
-        }
-    }
-    if (!templateContent) {
-        return {
-            id: 'cleo_gitignore',
-            category: 'configuration',
-            status: 'passed',
-            message: '.cleo/.gitignore exists (cannot verify against template)',
-            details: { path: gitignorePath, exists: true, templateAvailable: false },
-            fix: null,
-        };
-    }
-    // Compare
-    const normalizeContent = (s) => s.trim().replace(/\r\n/g, '\n');
-    const isMatch = normalizeContent(installedContent) === normalizeContent(templateContent);
-    return {
-        id: 'cleo_gitignore',
-        category: 'configuration',
-        status: isMatch ? 'passed' : 'warning',
-        message: isMatch
-            ? '.cleo/.gitignore matches template'
-            : '.cleo/.gitignore has drifted from template',
-        details: {
-            path: gitignorePath,
-            matchesTemplate: isMatch,
-            ...(!isMatch ? { fix: 'cleo upgrade' } : {}),
-        },
-        fix: isMatch ? null : 'cleo upgrade',
-    };
-}
-// ============================================================================
-// Check: Vital files tracked by git
-// ============================================================================
-/**
- * Detect the storage engine from project config.
- *
- * Per ADR-006, SQLite is the only supported storage engine. This function
- * checks the project's .cleo/config.json for an explicit storageEngine
- * override (for forward compatibility) but defaults to 'sqlite'.
- *
- * The projectRoot parameter is used to locate the project-level config.
- */
-function detectStorageEngine(projectRoot) {
-    const configPath = join(projectRoot, '.cleo', 'config.json');
-    if (existsSync(configPath)) {
-        try {
-            const config = JSON.parse(readFileSync(configPath, 'utf-8'));
-            if (typeof config.storageEngine === 'string' && config.storageEngine) {
-                return config.storageEngine;
-            }
-        }
-        catch {
-            // Invalid config; fall through to default
-        }
-    }
-    // ADR-006: SQLite is the canonical and only supported storage engine
-    return 'sqlite';
-}
-/**
- * Check that vital CLEO configuration files are tracked by git.
- * Only checks config files (config.json, .gitignore, project-info.json,
- * project-context.json). SQLite databases are excluded per ADR-013.
- * @task T4700
- */
-export function checkVitalFilesTracked(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const gitDir = join(root, '.git');
-    if (!existsSync(gitDir)) {
-        return {
-            id: 'vital_files_tracked',
-            category: 'configuration',
-            status: 'info',
-            message: 'Not a git repository (skipping vital file tracking check)',
-            details: { gitDir, isGitRepo: false },
-            fix: null,
-        };
-    }
-    // Build vital file list from centralized constant
-    const engine = detectStorageEngine(root);
-    const vitalFiles = CORE_PROTECTED_FILES.map((f) => `.cleo/${f}`);
-    const untracked = [];
-    for (const file of vitalFiles) {
-        const fullPath = join(root, file);
-        if (!existsSync(fullPath))
-            continue; // file doesn't exist, that's fine
-        try {
-            execFileSync('git', ['ls-files', '--error-unmatch', file], {
-                cwd: root,
-                stdio: 'pipe',
-            });
-        }
-        catch {
-            untracked.push(file);
-        }
-    }
-    if (untracked.length > 0) {
-        return {
-            id: 'vital_files_tracked',
-            category: 'configuration',
-            status: 'warning',
-            message: `${untracked.length} vital file(s) not tracked by git: ${untracked.join(', ')}`,
-            details: { engine, untracked },
-            fix: `git add ${untracked.join(' ')}`,
-        };
-    }
-    return {
-        id: 'vital_files_tracked',
-        category: 'configuration',
-        status: 'passed',
-        message: `All vital CLEO files are tracked by git (engine: ${engine})`,
-        details: { engine, checkedFiles: vitalFiles },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: Core files not gitignored
-// ============================================================================
-/**
- * Check that core CLEO files are not being ignored by .gitignore.
- * Uses `git check-ignore` to detect files that would be excluded by
- * any gitignore rule (root, .cleo/, or global).
- * Returns critical status if any protected file is gitignored.
- */
-export function checkCoreFilesNotIgnored(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const gitDir = join(root, '.git');
-    if (!existsSync(gitDir)) {
-        return {
-            id: 'core_files_not_ignored',
-            category: 'configuration',
-            status: 'info',
-            message: 'Not a git repository (skipping gitignore check)',
-            details: { isGitRepo: false },
-            fix: null,
-        };
-    }
-    const ignoredFiles = [];
-    for (const file of CORE_PROTECTED_FILES) {
-        const relPath = `.cleo/${file}`;
-        const fullPath = join(root, relPath);
-        if (!existsSync(fullPath))
-            continue;
-        try {
-            execFileSync('git', ['check-ignore', '-q', relPath], {
-                cwd: root,
-                stdio: 'pipe',
-            });
-            // Exit code 0 means the file IS ignored
-            ignoredFiles.push(relPath);
-        }
-        catch {
-            // Non-zero exit means the file is NOT ignored (good)
-        }
-    }
-    if (ignoredFiles.length > 0) {
-        return {
-            id: 'core_files_not_ignored',
-            category: 'configuration',
-            status: 'failed',
-            message: `Critical CLEO files are gitignored: ${ignoredFiles.join(', ')}`,
-            details: { ignoredFiles },
-            fix: 'Remove ignore rules for these files from .gitignore and .cleo/.gitignore, then: git add ' +
-                ignoredFiles.join(' '),
-        };
-    }
-    return {
-        id: 'core_files_not_ignored',
-        category: 'configuration',
-        status: 'passed',
-        message: 'No core CLEO files are gitignored',
-        details: { checkedFiles: CORE_PROTECTED_FILES.map((f) => `.cleo/${f}`) },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: SQLite databases not tracked by git
-// ============================================================================
-/**
- * Check that SQLite databases (.cleo/tasks.db) are NOT tracked by project git.
- * Tracked SQLite files cause data loss from merge conflicts (ADR-013).
- * Warns if tasks.db is currently tracked so the user can untrack it.
- * @task T5160
- */
-export function checkSqliteNotTracked(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const gitDir = join(root, '.git');
-    if (!existsSync(gitDir)) {
-        return {
-            id: 'sqlite_not_tracked',
-            category: 'configuration',
-            status: 'info',
-            message: 'Not a git repository (skipping SQLite tracking check)',
-            details: { isGitRepo: false },
-            fix: null,
-        };
-    }
-    const sqliteFile = '.cleo/tasks.db';
-    const fullPath = join(root, sqliteFile);
-    if (!existsSync(fullPath)) {
-        return {
-            id: 'sqlite_not_tracked',
-            category: 'configuration',
-            status: 'passed',
-            message: 'No SQLite database found (nothing to check)',
-            details: { file: sqliteFile, exists: false },
-            fix: null,
-        };
-    }
-    try {
-        execFileSync('git', ['ls-files', '--error-unmatch', sqliteFile], {
-            cwd: root,
-            stdio: 'pipe',
-        });
-        // Exit code 0 means the file IS tracked — that's the problem
-        return {
-            id: 'sqlite_not_tracked',
-            category: 'configuration',
-            status: 'warning',
-            message: `${sqliteFile} is tracked by git — this risks data loss from merge conflicts (see ADR-013)`,
-            details: { file: sqliteFile, tracked: true },
-            fix: `git rm --cached ${sqliteFile}`,
-        };
-    }
-    catch {
-        // Non-zero exit means the file is NOT tracked (good)
-        return {
-            id: 'sqlite_not_tracked',
-            category: 'configuration',
-            status: 'passed',
-            message: 'SQLite database is not tracked by git',
-            details: { file: sqliteFile, tracked: false },
-            fix: null,
-        };
-    }
-}
-// ============================================================================
-// Check: Legacy agent-outputs path
-// ============================================================================
-/**
- * Check if any legacy output directories still exist.
- * Delegates detection to the migration/agent-outputs utility.
- * @task T4700
- */
-export function checkLegacyAgentOutputs(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const cleoDir = join(root, '.cleo');
-    const detection = detectLegacyAgentOutputs(root, cleoDir);
-    if (detection.hasLegacy) {
-        return {
-            id: 'legacy_agent_outputs',
-            category: 'configuration',
-            status: 'warning',
-            message: `Legacy output directory found: ${detection.legacyPaths.join(', ')}`,
-            details: { paths: detection.legacyPaths, exists: true },
-            fix: 'cleo upgrade',
-        };
-    }
-    return {
-        id: 'legacy_agent_outputs',
-        category: 'configuration',
-        status: 'passed',
-        message: 'No legacy output directories found',
-        details: { exists: false },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: CAAMP marker integrity
-// ============================================================================
-/**
- * Verify balanced CAAMP:START/END markers in CLAUDE.md and AGENTS.md.
- * @task T5153
- */
-export function checkCaampMarkerIntegrity(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const files = ['CLAUDE.md', 'AGENTS.md'];
-    const issues = [];
-    for (const file of files) {
-        const filePath = join(root, file);
-        if (!existsSync(filePath))
-            continue;
-        let content;
-        try {
-            content = readFileSync(filePath, 'utf-8');
-        }
-        catch {
-            continue;
-        }
-        const startCount = (content.match(/<!-- CAAMP:START -->/g) || []).length;
-        const endCount = (content.match(/<!-- CAAMP:END -->/g) || []).length;
-        if (startCount !== endCount) {
-            issues.push(`${file}: ${startCount} CAAMP:START vs ${endCount} CAAMP:END`);
-        }
-        if (startCount === 0) {
-            issues.push(`${file}: no CAAMP markers found`);
-        }
-    }
-    if (issues.length > 0) {
-        return {
-            id: 'caamp_marker_integrity',
-            category: 'configuration',
-            status: 'warning',
-            message: `CAAMP marker issues: ${issues.join('; ')}`,
-            details: { issues },
-            fix: 'cleo upgrade',
-        };
-    }
-    return {
-        id: 'caamp_marker_integrity',
-        category: 'configuration',
-        status: 'passed',
-        message: 'CAAMP markers balanced in all config files',
-        details: { checkedFiles: files },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: @ reference target existence
-// ============================================================================
-/**
- * Parse @ references from AGENTS.md CAAMP block and verify each target file exists.
- * @task T5153
- */
-export function checkAtReferenceTargetExists(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const agentsPath = join(root, 'AGENTS.md');
-    if (!existsSync(agentsPath)) {
-        return {
-            id: 'at_reference_targets',
-            category: 'configuration',
-            status: 'info',
-            message: 'AGENTS.md not found (skipping @ reference check)',
-            details: { exists: false },
-            fix: null,
-        };
-    }
-    let content;
-    try {
-        content = readFileSync(agentsPath, 'utf-8');
-    }
-    catch {
-        return {
-            id: 'at_reference_targets',
-            category: 'configuration',
-            status: 'warning',
-            message: 'AGENTS.md not readable',
-            details: { readable: false },
-            fix: null,
-        };
-    }
-    // Extract CAAMP block content
-    const caampMatch = content.match(/<!-- CAAMP:START -->([\s\S]*?)<!-- CAAMP:END -->/);
-    if (!caampMatch) {
-        return {
-            id: 'at_reference_targets',
-            category: 'configuration',
-            status: 'info',
-            message: 'No CAAMP block found in AGENTS.md',
-            details: { hasCaampBlock: false },
-            fix: null,
-        };
-    }
-    const block = caampMatch[1];
-    // Match @path references (lines starting with @)
-    const refs = block.match(/^@(.+)$/gm) || [];
-    const missing = [];
-    for (const ref of refs) {
-        const rawPath = ref.slice(1).trim(); // Remove @ prefix
-        // Resolve ~ to homedir
-        const resolvedPath = rawPath.startsWith('~/')
-            ? join(homedir(), rawPath.slice(2))
-            : join(root, rawPath);
-        if (!existsSync(resolvedPath)) {
-            missing.push(rawPath);
-        }
-    }
-    if (missing.length > 0) {
-        return {
-            id: 'at_reference_targets',
-            category: 'configuration',
-            status: 'warning',
-            message: `Missing @ reference targets: ${missing.join(', ')}`,
-            details: { missing, totalRefs: refs.length },
-            fix: 'cleo upgrade',
-        };
-    }
-    return {
-        id: 'at_reference_targets',
-        category: 'configuration',
-        status: 'passed',
-        message: `All ${refs.length} @ reference targets exist`,
-        details: { totalRefs: refs.length },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: Template freshness
-// ============================================================================
-/**
- * Compare templates/CLEO-INJECTION.md vs ~/.cleo/templates/CLEO-INJECTION.md.
- * @task T5153
- */
-export function checkTemplateFreshness(projectRoot, cleoHome) {
-    const root = projectRoot ?? process.cwd();
-    const home = cleoHome ?? getCleoHome();
-    const sourcePath = join(root, 'templates', 'CLEO-INJECTION.md');
-    const deployedPath = join(home, 'templates', 'CLEO-INJECTION.md');
-    if (!existsSync(sourcePath)) {
-        return {
-            id: 'template_freshness',
-            category: 'configuration',
-            status: 'info',
-            message: 'Source template not found (not in project root)',
-            details: { sourcePath, exists: false },
-            fix: null,
-        };
-    }
-    if (!existsSync(deployedPath)) {
-        return {
-            id: 'template_freshness',
-            category: 'configuration',
-            status: 'warning',
-            message: 'Deployed template not found at ~/.cleo/templates/',
-            details: { deployedPath, exists: false },
-            fix: 'cp templates/CLEO-INJECTION.md ~/.cleo/templates/CLEO-INJECTION.md',
-        };
-    }
-    const sourceContent = readFileSync(sourcePath, 'utf-8');
-    const deployedContent = readFileSync(deployedPath, 'utf-8');
-    if (sourceContent !== deployedContent) {
-        return {
-            id: 'template_freshness',
-            category: 'configuration',
-            status: 'warning',
-            message: 'Deployed template differs from source — may be stale',
-            details: { sourcePath, deployedPath, match: false },
-            fix: 'cp templates/CLEO-INJECTION.md ~/.cleo/templates/CLEO-INJECTION.md',
-        };
-    }
-    return {
-        id: 'template_freshness',
-        category: 'configuration',
-        status: 'passed',
-        message: 'Deployed template matches source',
-        details: { sourcePath, deployedPath, match: true },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: Tier markers present
-// ============================================================================
-/**
- * Verify all 3 tier markers exist with matching close tags in deployed template.
- * @task T5153
- */
-export function checkTierMarkersPresent(cleoHome) {
-    const home = cleoHome ?? getCleoHome();
-    const templatePath = join(home, 'templates', 'CLEO-INJECTION.md');
-    if (!existsSync(templatePath)) {
-        return {
-            id: 'tier_markers_present',
-            category: 'configuration',
-            status: 'warning',
-            message: 'Template not found — cannot check tier markers',
-            details: { path: templatePath, exists: false },
-            fix: 'Run install.sh to reinstall CLEO',
-        };
-    }
-    const content = readFileSync(templatePath, 'utf-8');
-    const expectedTiers = ['minimal', 'standard', 'orchestrator'];
-    const missing = [];
-    const unclosed = [];
-    for (const tier of expectedTiers) {
-        const openTag = `<!-- TIER:${tier} -->`;
-        const closeTag = `<!-- /TIER:${tier} -->`;
-        if (!content.includes(openTag)) {
-            missing.push(tier);
-        }
-        else if (!content.includes(closeTag)) {
-            unclosed.push(tier);
-        }
-    }
-    if (missing.length > 0 || unclosed.length > 0) {
-        const parts = [];
-        if (missing.length > 0)
-            parts.push(`missing: ${missing.join(', ')}`);
-        if (unclosed.length > 0)
-            parts.push(`unclosed: ${unclosed.join(', ')}`);
-        return {
-            id: 'tier_markers_present',
-            category: 'configuration',
-            status: 'warning',
-            message: `Tier marker issues: ${parts.join('; ')}`,
-            details: { missing, unclosed },
-            fix: 'Regenerate template from source: cp templates/CLEO-INJECTION.md ~/.cleo/templates/',
-        };
-    }
-    return {
-        id: 'tier_markers_present',
-        category: 'configuration',
-        status: 'passed',
-        message: 'All 3 tier markers present with matching close tags',
-        details: { tiers: expectedTiers },
-        fix: null,
-    };
-}
-// ============================================================================
-// Check: Node.js Version
-// ============================================================================
-/**
- * Check that Node.js meets the minimum required version.
- * Provides OS-specific upgrade instructions when below minimum.
- */
-export function checkNodeVersion() {
-    const nodeInfo = getNodeVersionInfo();
-    const { version, major, minor, patch, meetsMinimum } = nodeInfo;
-    if (meetsMinimum) {
-        return {
-            id: 'node_version',
-            category: 'runtime',
-            status: 'passed',
-            message: `Node.js v${version} meets minimum requirement (v${MINIMUM_NODE_MAJOR}+)`,
-            details: { version, major, minor, patch, minimum: MINIMUM_NODE_MAJOR },
-            fix: null,
-        };
-    }
-    const upgrade = getNodeUpgradeInstructions();
-    return {
-        id: 'node_version',
-        category: 'runtime',
-        status: 'failed',
-        message: `Node.js v${version} is below minimum v${MINIMUM_NODE_MAJOR}.0.0`,
-        details: {
-            version,
-            major,
-            minor,
-            patch,
-            minimum: MINIMUM_NODE_MAJOR,
-            platform: upgrade.platform,
-            arch: upgrade.arch,
-            upgradeOptions: upgrade.instructions,
-        },
-        fix: upgrade.recommended,
-    };
-}
-// ============================================================================
-// Check: Global schema health
-// ============================================================================
-/**
- * Check that global schemas at ~/.cleo/schemas/ are installed and not stale.
- * Delegates to checkGlobalSchemas() from schema-management.ts.
- *
- * The projectRoot parameter exists for API consistency with other check
- * functions in runAllGlobalChecks(), but global schemas live at ~/.cleo/schemas/
- * (not per-project). The parameter is intentionally unused because schema
- * health is a system-wide concern, not project-scoped.
- */
-export function checkGlobalSchemaHealth(_projectRoot) {
-    try {
-        const result = checkGlobalSchemasRaw();
-        if (result.missing.length > 0) {
-            return {
-                id: 'global_schema_health',
-                category: 'configuration',
-                status: 'warning',
-                message: `Missing global schemas: ${result.missing.join(', ')}`,
-                details: { missing: result.missing, installed: result.installed, bundled: result.bundled },
-                fix: 'cleo upgrade',
-            };
-        }
-        if (result.stale.length > 0) {
-            return {
-                id: 'global_schema_health',
-                category: 'configuration',
-                status: 'warning',
-                message: `Stale global schemas: ${result.stale.join(', ')}`,
-                details: { stale: result.stale, installed: result.installed, bundled: result.bundled },
-                fix: 'cleo upgrade',
-            };
-        }
-        return {
-            id: 'global_schema_health',
-            category: 'configuration',
-            status: 'passed',
-            message: `All ${result.installed} global schemas installed and current`,
-            details: { installed: result.installed, bundled: result.bundled },
-            fix: null,
-        };
-    }
-    catch (err) {
-        return {
-            id: 'global_schema_health',
-            category: 'configuration',
-            status: 'warning',
-            message: `Could not check global schemas: ${err instanceof Error ? err.message : String(err)}`,
-            details: {},
-            fix: null,
-        };
-    }
-}
-// ============================================================================
-// Check: No deprecated local schemas
-// ============================================================================
-/**
- * Warn if deprecated .cleo/schemas/ directory still exists in the project.
- * Schemas should live in ~/.cleo/schemas/ (global), not in project directories.
- */
-export function checkNoLocalSchemas(projectRoot) {
-    const root = projectRoot ?? process.cwd();
-    const localSchemasDir = join(root, '.cleo', 'schemas');
-    if (!existsSync(localSchemasDir)) {
-        return {
-            id: 'no_local_schemas',
-            category: 'configuration',
-            status: 'passed',
-            message: 'No deprecated .cleo/schemas/ directory found',
-            details: { path: localSchemasDir, exists: false },
-            fix: null,
-        };
-    }
-    return {
-        id: 'no_local_schemas',
-        category: 'configuration',
-        status: 'warning',
-        message: 'Deprecated .cleo/schemas/ directory found — schemas should be global',
-        details: { path: localSchemasDir, exists: true },
-        fix: 'cleo upgrade (will migrate to ~/.cleo/schemas/)',
-    };
-}
-// ============================================================================
-// Run All Checks
-// ============================================================================
-// ============================================================================
-// Check: JSON schema file integrity
-// ============================================================================
-/**
- * Check that active JSON files (config.json, project-info.json, etc.) are valid
- * against their schemas and have current schema versions.
- *
- * Maps JsonFileIntegrityResult[] from checkSchemaIntegrity() into CheckResult[],
- * then returns a single rolled-up CheckResult for the doctor summary.
- */
-export async function checkJsonSchemaIntegrity(projectDir) {
-    const { checkSchemaIntegrity } = await import('../schema-integrity.js');
-    let report;
-    try {
-        report = await checkSchemaIntegrity(projectDir);
-    }
-    catch (err) {
-        return {
-            id: 'json_schema_integrity',
-            category: 'data',
-            status: 'warning',
-            message: `Could not run JSON schema integrity check: ${err instanceof Error ? err.message : String(err)}`,
-            details: {},
-            fix: null,
-        };
-    }
-    const failures = report.files.filter((f) => f.status === 'missing' || f.status === 'invalid');
-    const warnings = report.files.filter((f) => f.status === 'version_mismatch' || f.status === 'schema_not_found');
-    const details = {
-        files: report.files.map((f) => ({ label: f.label, status: f.status, errors: f.errors })),
-        sqliteVersion: report.sqliteVersion,
-    };
-    if (failures.length > 0) {
-        const messages = failures.flatMap((f) => f.errors);
-        return {
-            id: 'json_schema_integrity',
-            category: 'data',
-            status: 'failed',
-            message: `JSON schema integrity failures: ${messages.join('; ')}`,
-            details,
-            fix: 'cleo upgrade',
-        };
-    }
-    if (warnings.length > 0) {
-        const messages = warnings.flatMap((f) => f.errors);
-        return {
-            id: 'json_schema_integrity',
-            category: 'data',
-            status: 'warning',
-            message: `JSON schema integrity warnings: ${messages.join('; ')}`,
-            details,
-            fix: 'cleo upgrade',
-        };
-    }
-    return {
-        id: 'json_schema_integrity',
-        category: 'data',
-        status: 'passed',
-        message: `All JSON config files valid (SQLite: ${report.sqliteVersion ?? 'unknown'})`,
-        details,
-        fix: null,
-    };
-}
-/**
- * Run all global health checks and return results array.
- * @task T4525
- */
-export function runAllGlobalChecks(cleoHome, projectRoot) {
-    const home = cleoHome ?? getCleoHome();
-    return [
-        checkNodeVersion(),
-        checkCliInstallation(home),
-        checkCliVersion(home),
-        checkDocsAccessibility(home),
-        checkAtReferenceResolution(home),
-        checkAgentsMdHub(projectRoot),
-        checkRootGitignore(projectRoot),
-        checkCleoGitignore(projectRoot),
-        checkVitalFilesTracked(projectRoot),
-        checkCoreFilesNotIgnored(projectRoot),
-        checkSqliteNotTracked(projectRoot),
-        checkLegacyAgentOutputs(projectRoot),
-        // Injection chain checks (T5153)
-        checkCaampMarkerIntegrity(projectRoot),
-        checkAtReferenceTargetExists(projectRoot),
-        checkTemplateFreshness(projectRoot, home),
-        checkTierMarkersPresent(home),
-        // Global schema and local schema deprecation checks
-        checkGlobalSchemaHealth(projectRoot),
-        checkNoLocalSchemas(projectRoot),
-    ];
-}
-// ============================================================================
-// Health Status Calculation
-// ============================================================================
-/**
- * Calculate overall status from check results.
- * Returns: 0=passed, 50=warning, 52=critical.
- * @task T4525
- */
-export function calculateHealthStatus(checks) {
-    const hasFailed = checks.some((c) => c.status === 'failed');
-    const hasWarning = checks.some((c) => c.status === 'warning');
-    if (hasFailed)
-        return 52;
-    if (hasWarning)
-        return 50;
-    return 0;
-}
-//# sourceMappingURL=checks.js.map