@cleocode/core 2026.3.62 → 2026.3.63

package/dist/store/brain-sqlite.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"brain-sqlite.d.ts","sourceRoot":"","sources":["../../src/store/brain-sqlite.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAOH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAGhD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,yBAAyB,CAAC;AAIlE,OAAO,KAAK,WAAW,MAAM,mBAAmB,CAAC;AAQjD,gFAAgF;AAChF,eAAO,MAAM,oBAAoB,UAAU,CAAC;AAW5C;;GAEG;AACH,wBAAgB,cAAc,CAAC,GAAG,CAAC,EAAE,MAAM,GAAG,MAAM,CAEnD;AAED;;;;;;GAMG;AACH,wBAAgB,4BAA4B,IAAI,MAAM,CAMrD;AAsHD;;GAEG;AACH,wBAAgB,gBAAgB,IAAI,OAAO,CAE1C;AAED;;;;;;;GAOG;AACH,wBAAsB,UAAU,CAAC,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,OAAO,WAAW,CAAC,CAAC,CA0D9F;AAED;;GAEG;AACH,wBAAgB,YAAY,IAAI,IAAI,CAcnC;AAED;;;;GAIG;AACH,wBAAgB,iBAAiB,IAAI,IAAI,CAexC;AAED;;;;GAIG;AACH,wBAAgB,gBAAgB,IAAI,YAAY,GAAG,IAAI,CAEtD;AAED,YAAY,EAAE,kBAAkB,EAAE,CAAC;AACnC;;GAEG;AACH,OAAO,EAAE,WAAW,EAAE,CAAC"}
+{"version":3,"file":"brain-sqlite.d.ts","sourceRoot":"","sources":["../../src/store/brain-sqlite.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAOH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAGhD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,yBAAyB,CAAC;AAKlE,OAAO,KAAK,WAAW,MAAM,mBAAmB,CAAC;AAQjD,gFAAgF;AAChF,eAAO,MAAM,oBAAoB,UAAU,CAAC;AAW5C;;GAEG;AACH,wBAAgB,cAAc,CAAC,GAAG,CAAC,EAAE,MAAM,GAAG,MAAM,CAEnD;AAED;;;;;;GAMG;AACH,wBAAgB,4BAA4B,IAAI,MAAM,CAMrD;AA+ID;;GAEG;AACH,wBAAgB,gBAAgB,IAAI,OAAO,CAE1C;AAED;;;;;;;GAOG;AACH,wBAAsB,UAAU,CAAC,GAAG,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,OAAO,WAAW,CAAC,CAAC,CA0D9F;AAED;;GAEG;AACH,wBAAgB,YAAY,IAAI,IAAI,CAcnC;AAED;;;;GAIG;AACH,wBAAgB,iBAAiB,IAAI,IAAI,CAexC;AAED;;;;GAIG;AACH,wBAAgB,gBAAgB,IAAI,YAAY,GAAG,IAAI,CAEtD;AAED,YAAY,EAAE,kBAAkB,EAAE,CAAC;AACnC;;GAEG;AACH,OAAO,EAAE,WAAW,EAAE,CAAC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cleocode/core",
-  "version": "2026.3.62",
+  "version": "2026.3.63",
   "description": "CLEO core business logic kernel — tasks, sessions, memory, orchestration, lifecycle, with bundled SQLite store",
   "type": "module",
   "main": "./dist/index.js",
@@ -36,10 +36,10 @@
     "write-file-atomic": "^6.0.0",
     "yaml": "^2.8.2",
     "zod": "^3.25.76",
-    "@cleocode/adapters": "2026.3.62",
-    "@cleocode/skills": "2026.3.62",
-    "@cleocode/contracts": "2026.3.62",
-    "@cleocode/agents": "2026.3.62"
+    "@cleocode/agents": "2026.3.63",
+    "@cleocode/contracts": "2026.3.63",
+    "@cleocode/adapters": "2026.3.63",
+    "@cleocode/skills": "2026.3.63"
   },
   "engines": {
     "node": ">=24.0.0"

package/src/store/brain-sqlite.ts

@@ -20,6 +20,7 @@ import { readMigrationFiles } from 'drizzle-orm/migrator';
 import type { NodeSQLiteDatabase } from 'drizzle-orm/node-sqlite';
 import { drizzle } from 'drizzle-orm/node-sqlite';
 import { migrate } from 'drizzle-orm/node-sqlite/migrator';
+import { getLogger } from '../logger.js';
 import { getCleoDirAbsolute } from '../paths.js';
 import * as brainSchema from './brain-schema.js';
 import { isSqliteBusy, openNativeDatabase } from './sqlite.js';
@@ -119,6 +120,31 @@ function runBrainMigrations(
     }
   }
 
+  // Fix #65: Reconcile stale migration journal entries from older CLEO versions.
+  // Same pattern as tasks.db fix in sqlite.ts — see #63 for details.
+  if (tableExists(nativeDb, '__drizzle_migrations') && tableExists(nativeDb, 'brain_decisions')) {
+    const localMigrations = readMigrationFiles({ migrationsFolder });
+    const localHashes = new Set(localMigrations.map((m) => m.hash));
+    const dbEntries = nativeDb.prepare('SELECT hash FROM "__drizzle_migrations"').all() as Array<{
+      hash: string;
+    }>;
+    const hasOrphanedEntries = dbEntries.some((e) => !localHashes.has(e.hash));
+
+    if (hasOrphanedEntries) {
+      const log = getLogger('brain');
+      log.warn(
+        { orphaned: dbEntries.filter((e) => !localHashes.has(e.hash)).length },
+        'Detected stale migration journal entries from a previous CLEO version. Reconciling brain.db.',
+      );
+      nativeDb.exec('DELETE FROM "__drizzle_migrations"');
+      for (const m of localMigrations) {
+        nativeDb.exec(
+          `INSERT INTO "__drizzle_migrations" ("hash", "created_at") VALUES ('${m.hash}', ${m.folderMillis})`,
+        );
+      }
+    }
+  }
+
   // Run pending migrations via drizzle-orm/node-sqlite/migrator (synchronous).
   const MAX_RETRIES = 5;
   const BASE_DELAY_MS = 100;