@cleocode/core 2026.3.61 → 2026.3.63

package/dist/cleo.js

@@ -17,6 +17,10 @@ import path from 'node:path';
 // Admin
 import { exportTasks } from './admin/export.js';
 import { importTasks } from './admin/import.js';
+// Agents
+import { checkAgentHealth, deregisterAgent, detectCrashedAgents, getAgentCapacity, heartbeat, isOverloaded, listAgentInstances, registerAgent, } from './agents/index.js';
+// Intelligence
+import { calculateBlastRadius, predictImpact, } from './intelligence/index.js';
 // Lifecycle
 import { checkGate, completeStage, failGate, getLifecycleHistory, getLifecycleStatus, PIPELINE_STAGES, passGate, resetStage, skipStage, startStage, } from './lifecycle/index.js';
 // Memory
@@ -40,6 +44,8 @@ import { computeBriefing, computeHandoff, endSession, findSessions, gcSessions,
 import { addSticky, archiveSticky, convertStickyToMemory, convertStickyToTask, getSticky, listStickies, purgeSticky, } from './sticky/index.js';
 // Store
 import { getAccessor } from './store/data-accessor.js';
+// Task Work (start/stop/current)
+import { currentTask, startTask, stopTask } from './task-work/index.js';
 // Tasks
 import { addTask } from './tasks/add.js';
 import { archiveTasks } from './tasks/archive.js';
@@ -104,6 +110,9 @@ export class Cleo {
             complete: (p) => completeTask({ taskId: p.taskId, notes: p.notes }, root, store),
             delete: (p) => deleteTask({ taskId: p.taskId, force: p.force }, root, store),
             archive: (p) => archiveTasks({ before: p?.before, taskIds: p?.taskIds, dryRun: p?.dryRun }, root, store),
+            start: (taskId) => startTask(taskId, root, store),
+            stop: () => stopTask(root, store),
+            current: () => currentTask(root, store),
         };
     }
     // === Sessions ===
@@ -111,7 +120,7 @@ export class Cleo {
         const root = this.projectRoot;
         const store = this._store ?? undefined;
         return {
-            start: (p) => startSession({ name: p.name, scope: p.scope, agent: p.agent }, root, store),
+            start: (p) => startSession({ name: p.name, scope: p.scope, agent: p.agent, startTask: p.startTask }, root, store),
             end: (p) => endSession({ note: p?.note }, root, store),
             status: () => sessionStatus(root, store),
             resume: (id) => resumeSession(id, root, store),
@@ -245,6 +254,32 @@ export class Cleo {
             sharingStatus: () => getSharingStatus(),
         };
     }
+    // === Agents ===
+    get agents() {
+        const root = this.projectRoot;
+        return {
+            register: (opts) => registerAgent(opts, root),
+            deregister: (agentId) => deregisterAgent(agentId, root),
+            health: (agentId) => checkAgentHealth(agentId, undefined, root),
+            detectCrashed: (thresholdMs) => detectCrashedAgents(thresholdMs, root),
+            recordHeartbeat: (agentId) => heartbeat(agentId, root),
+            capacity: (agentId) => getAgentCapacity(agentId, root),
+            isOverloaded: (threshold) => isOverloaded(threshold, root),
+            list: (p) => listAgentInstances({
+                status: p?.status,
+                agentType: p?.agentType,
+            }, root),
+        };
+    }
+    // === Intelligence ===
+    get intelligence() {
+        const root = this.projectRoot;
+        const store = this._store ?? undefined;
+        return {
+            predictImpact: (change) => predictImpact(change, root, store ?? undefined),
+            blastRadius: (taskId) => calculateBlastRadius(taskId, store ?? undefined, root),
+        };
+    }
     // === Sync (Task Reconciliation) ===
     get sync() {
         const root = this.projectRoot;

package/dist/cleo.js.map

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package/dist/index.js

@@ -10666,6 +10666,25 @@ function runBrainMigrations(nativeDb, db) {
       );
     }
   }
+  if (tableExists(nativeDb, "__drizzle_migrations") && tableExists(nativeDb, "brain_decisions")) {
+    const localMigrations = readMigrationFiles({ migrationsFolder });
+    const localHashes = new Set(localMigrations.map((m) => m.hash));
+    const dbEntries = nativeDb.prepare('SELECT hash FROM "__drizzle_migrations"').all();
+    const hasOrphanedEntries = dbEntries.some((e) => !localHashes.has(e.hash));
+    if (hasOrphanedEntries) {
+      const log9 = getLogger("brain");
+      log9.warn(
+        { orphaned: dbEntries.filter((e) => !localHashes.has(e.hash)).length },
+        "Detected stale migration journal entries from a previous CLEO version. Reconciling brain.db."
+      );
+      nativeDb.exec('DELETE FROM "__drizzle_migrations"');
+      for (const m of localMigrations) {
+        nativeDb.exec(
+          `INSERT INTO "__drizzle_migrations" ("hash", "created_at") VALUES ('${m.hash}', ${m.folderMillis})`
+        );
+      }
+    }
+  }
   const MAX_RETRIES = 5;
   const BASE_DELAY_MS = 100;
   const MAX_DELAY_MS = 2e3;
@@ -10773,6 +10792,7 @@ var init_brain_sqlite = __esm({
     init_migrator();
     init_node_sqlite();
     init_migrator2();
+    init_logger();
     init_paths();
     init_brain_schema();
     init_sqlite2();
@@ -13255,7 +13275,7 @@ async function showSequence(cwd) {
     counter: seq.counter,
     lastId: seq.lastId,
     checksum: seq.checksum,
-    nextId: `T${seq.counter + 1}`
+    nextId: `T${String(seq.counter + 1).padStart(3, "0")}`
   };
 }
 async function loadAllTasks(cwd, accessor) {
@@ -23397,6 +23417,58 @@ async function addTask(options, cwd, accessor) {
   if (duplicate) {
     return { task: duplicate, duplicate: true };
   }
+  if (options.dryRun) {
+    const previewNow = (/* @__PURE__ */ new Date()).toISOString();
+    let previewParentForStage = null;
+    if (parentId) {
+      const previewParentTask = await dataAccessor.loadSingleTask(parentId);
+      previewParentForStage = previewParentTask ? { pipelineStage: previewParentTask.pipelineStage, type: previewParentTask.type } : null;
+    }
+    const previewPipelineStage = resolveDefaultPipelineStage({
+      explicitStage: options.pipelineStage,
+      taskType: taskType ?? null,
+      parentTask: previewParentForStage
+    });
+    const previewPosition = options.position !== void 0 ? options.position : await dataAccessor.getNextPosition(parentId);
+    const previewTask = {
+      id: "T???",
+      title: options.title,
+      description: options.description,
+      status,
+      priority,
+      type: taskType,
+      parentId: parentId || null,
+      position: previewPosition,
+      positionVersion: 0,
+      size,
+      pipelineStage: previewPipelineStage,
+      createdAt: previewNow,
+      updatedAt: previewNow
+    };
+    if (phase) previewTask.phase = phase;
+    if (options.labels?.length) previewTask.labels = options.labels.map((l) => l.trim());
+    if (options.files?.length) previewTask.files = options.files.map((f) => f.trim());
+    if (options.acceptance?.length)
+      previewTask.acceptance = options.acceptance.map((a) => a.trim());
+    if (options.depends?.length) previewTask.depends = options.depends.map((d) => d.trim());
+    if (options.notes) {
+      const previewNote = `${(/* @__PURE__ */ new Date()).toISOString().replace("T", " ").replace(/\.\d+Z$/, " UTC")}: ${options.notes}`;
+      previewTask.notes = [previewNote];
+    }
+    if (status === "blocked" && options.description) {
+      previewTask.blockedBy = options.description;
+    }
+    if (status === "done") {
+      previewTask.completedAt = previewNow;
+    }
+    if (taskType !== "epic") {
+      const verificationEnabledRaw = await getRawConfigValue("verification.enabled", cwd);
+      if (verificationEnabledRaw === true) {
+        previewTask.verification = buildDefaultVerification(previewNow);
+      }
+    }
+    return { task: previewTask, dryRun: true };
+  }
   const taskId = await allocateNextTaskId(cwd);
   const now = (/* @__PURE__ */ new Date()).toISOString();
   let resolvedParentForStage = null;
@@ -23466,9 +23538,6 @@ async function addTask(options, cwd, accessor) {
       task.verification = buildDefaultVerification(now);
     }
   }
-  if (options.dryRun) {
-    return { task, dryRun: true };
-  }
   await dataAccessor.transaction(async (tx) => {
     if (options.position !== void 0) {
       await dataAccessor.shiftPositions(parentId, options.position, 1);
@@ -24901,7 +24970,7 @@ __export(init_exports, {
   isAutoInitEnabled: () => isAutoInitEnabled,
   updateDocs: () => updateDocs
 });
-import { existsSync as existsSync100, readdirSync as readdirSync33, readFileSync as readFileSync74 } from "node:fs";
+import { existsSync as existsSync100, readdirSync as readdirSync34, readFileSync as readFileSync74 } from "node:fs";
 import { copyFile as copyFile3, lstat, mkdir as mkdir16, readFile as readFile17, symlink, unlink as unlink4, writeFile as writeFile11 } from "node:fs/promises";
 import { platform as platform4 } from "node:os";
 import { basename as basename17, dirname as dirname19, join as join101 } from "node:path";
@@ -24951,7 +25020,7 @@ async function initAgentDefinition(created, warnings) {
   } catch (_err) {
     try {
       await mkdir16(globalAgentsDir, { recursive: true });
-      const files = readdirSync33(agentSourceDir);
+      const files = readdirSync34(agentSourceDir);
       for (const file2 of files) {
         await copyFile3(join101(agentSourceDir, file2), join101(globalAgentsDir, file2));
       }
@@ -25100,7 +25169,7 @@ async function installGitHubTemplates(projectRoot, created, skipped) {
   await mkdir16(issueTemplateDir, { recursive: true });
   const issueSrcDir = join101(templateSrcDir, "ISSUE_TEMPLATE");
   if (existsSync100(issueSrcDir)) {
-    const issueFiles = readdirSync33(issueSrcDir);
+    const issueFiles = readdirSync34(issueSrcDir);
     for (const file2 of issueFiles) {
       const dest = join101(issueTemplateDir, file2);
       if (existsSync100(dest)) {
@@ -47634,8 +47703,10 @@ init_errors3();
 // packages/core/src/phases/deps.ts
 init_src();
 init_errors3();
-async function loadAllTasks3(_cwd, accessor) {
-  const { tasks: tasks2 } = await accessor.queryTasks({});
+init_data_accessor();
+async function loadAllTasks3(cwd, accessor) {
+  const acc = accessor ?? await getAccessor(cwd);
+  const { tasks: tasks2 } = await acc.queryTasks({});
   return tasks2;
 }
 function buildGraph(tasks2) {
@@ -51798,6 +51869,13 @@ var CAPABILITY_MATRIX = [
     mode: "native",
     preferredChannel: "either"
   },
+  {
+    domain: "admin",
+    operation: "backup",
+    gateway: "query",
+    mode: "native",
+    preferredChannel: "either"
+  },
   {
     domain: "admin",
     operation: "backup",
@@ -56869,7 +56947,7 @@ async function getProjectStats(opts, accessor) {
       dbAnd(dbEq(tasksTable.status, "archived"), dbEq(tasksTable.archiveReason, "completed"))
     ).get();
     archivedCompleted = archivedDoneRow?.c ?? 0;
-    totalCompleted = (statusMap["done"] ?? 0) + archivedCompleted;
+    totalCompleted = entries.filter(isComplete).length;
   } catch {
     totalCreated = entries.filter(isCreate).length;
     totalCompleted = entries.filter(isComplete).length;
@@ -57835,7 +57913,7 @@ async function auditData(projectRoot, opts) {
 // packages/core/src/system/backup.ts
 init_src();
 init_errors3();
-import { existsSync as existsSync81, mkdirSync as mkdirSync18, readFileSync as readFileSync59, writeFileSync as writeFileSync11 } from "node:fs";
+import { existsSync as existsSync81, mkdirSync as mkdirSync18, readdirSync as readdirSync27, readFileSync as readFileSync59, writeFileSync as writeFileSync11 } from "node:fs";
 import { join as join84 } from "node:path";
 function createBackup2(projectRoot, opts) {
   const cleoDir = join84(projectRoot, ".cleo");
@@ -57928,7 +58006,7 @@ function restoreBackup(projectRoot, params) {
 
 // packages/core/src/system/cleanup.ts
 init_src();
-import { existsSync as existsSync82, readdirSync as readdirSync27, readFileSync as readFileSync60, unlinkSync as unlinkSync5, writeFileSync as writeFileSync12 } from "node:fs";
+import { existsSync as existsSync82, readdirSync as readdirSync28, readFileSync as readFileSync60, unlinkSync as unlinkSync5, writeFileSync as writeFileSync12 } from "node:fs";
 import { join as join86 } from "node:path";
 
 // packages/core/src/audit-prune.ts
@@ -58045,10 +58123,10 @@ async function cleanupSystem(projectRoot, params) {
     case "backups": {
       const backupBaseDir = join86(cleoDir, "backups");
       if (existsSync82(backupBaseDir)) {
-        for (const typeDir of readdirSync27(backupBaseDir)) {
+        for (const typeDir of readdirSync28(backupBaseDir)) {
           const fullDir = join86(backupBaseDir, typeDir);
           try {
-            for (const file2 of readdirSync27(fullDir)) {
+            for (const file2 of readdirSync28(fullDir)) {
               if (file2.endsWith(".meta.json")) {
                 const metaFilePath = join86(fullDir, file2);
                 try {
@@ -58057,7 +58135,7 @@ async function cleanupSystem(projectRoot, params) {
                     items.push(file2.replace(".meta.json", ""));
                     if (!dryRun) {
                       unlinkSync5(metaFilePath);
-                      for (const bf of readdirSync27(fullDir)) {
+                      for (const bf of readdirSync28(fullDir)) {
                         if (bf.includes(meta.backupId)) {
                           try {
                             unlinkSync5(join86(fullDir, bf));
@@ -58087,7 +58165,7 @@ async function cleanupSystem(projectRoot, params) {
       }
       const auditPattern = /^audit-log-.*\.json$/;
       if (existsSync82(cleoDir)) {
-        for (const file2 of readdirSync27(cleoDir)) {
+        for (const file2 of readdirSync28(cleoDir)) {
           if (auditPattern.test(file2)) {
             items.push(file2);
             if (!dryRun) {
@@ -58143,7 +58221,7 @@ import { randomBytes as randomBytes12 } from "node:crypto";
 import {
   existsSync as existsSync84,
   mkdirSync as mkdirSync20,
-  readdirSync as readdirSync28,
+  readdirSync as readdirSync29,
   readFileSync as readFileSync61,
   renameSync as renameSync6,
   unlinkSync as unlinkSync6,
@@ -60688,7 +60766,7 @@ __export(templates_exports, {
 });
 
 // packages/core/src/templates/parser.ts
-import { existsSync as existsSync92, readdirSync as readdirSync29, readFileSync as readFileSync67 } from "fs";
+import { existsSync as existsSync92, readdirSync as readdirSync30, readFileSync as readFileSync67 } from "fs";
 import { join as join96 } from "path";
 import { parse as parseYaml } from "yaml";
 var SUFFIX_PATTERNS = ["_report", "_request", "_question"];
@@ -60763,7 +60841,7 @@ function parseIssueTemplates2(projectRoot) {
   }
   let files;
   try {
-    files = readdirSync29(templateDir).filter((f) => /\.ya?ml$/i.test(f) && f !== "config.yml");
+    files = readdirSync30(templateDir).filter((f) => /\.ya?ml$/i.test(f) && f !== "config.yml");
   } catch (error40) {
     return {
       success: false,
@@ -61174,7 +61252,7 @@ ${markdown}`);
 }
 
 // packages/core/src/ui/command-registry.ts
-import { existsSync as existsSync95, readdirSync as readdirSync30, readFileSync as readFileSync70 } from "node:fs";
+import { existsSync as existsSync95, readdirSync as readdirSync31, readFileSync as readFileSync70 } from "node:fs";
 import { basename as basename16, join as join98 } from "node:path";
 var CLEO_HEADER_START = "###CLEO";
 var CLEO_HEADER_END = "###END";
@@ -61259,7 +61337,7 @@ function parseCommandHeader(scriptPath) {
 function scanAllCommands(scriptsDir) {
   const registry2 = /* @__PURE__ */ new Map();
   if (!existsSync95(scriptsDir)) return registry2;
-  for (const file2 of readdirSync30(scriptsDir)) {
+  for (const file2 of readdirSync31(scriptsDir)) {
     if (!file2.endsWith(".sh") && !file2.endsWith(".ts")) continue;
     const meta = parseCommandHeader(join98(scriptsDir, file2));
     if (meta) {
@@ -62201,12 +62279,12 @@ function calculateOrchestrationOverhead(orchestratorTokens, totalSubagentTokens,
 }
 
 // packages/core/src/validation/docs-sync.ts
-import { existsSync as existsSync96, readdirSync as readdirSync31, readFileSync as readFileSync71 } from "node:fs";
+import { existsSync as existsSync96, readdirSync as readdirSync32, readFileSync as readFileSync71 } from "node:fs";
 import { join as join99 } from "node:path";
 function getScriptCommands(scriptsDir) {
   if (!existsSync96(scriptsDir)) return [];
   try {
-    return readdirSync31(scriptsDir).filter((f) => f.endsWith(".sh")).map((f) => f.replace(/\.sh$/, "")).sort();
+    return readdirSync32(scriptsDir).filter((f) => f.endsWith(".sh")).map((f) => f.replace(/\.sh$/, "")).sort();
   } catch {
     return [];
   }
@@ -63584,12 +63662,12 @@ async function validateAndLog(taskId, manifestPath = DEFAULT_MANIFEST_PATH, comp
 
 // packages/core/src/validation/protocol-common.ts
 init_src();
-import { existsSync as existsSync99, readdirSync as readdirSync32, readFileSync as readFileSync73 } from "node:fs";
+import { existsSync as existsSync99, readdirSync as readdirSync33, readFileSync as readFileSync73 } from "node:fs";
 function checkOutputFileExists(taskId, expectedDir, pattern) {
   if (!existsSync99(expectedDir)) return false;
   const filePattern = pattern ?? `${taskId}`;
   try {
-    const files = readdirSync32(expectedDir);
+    const files = readdirSync33(expectedDir);
     return files.some((f) => f.includes(filePattern) && f.endsWith(".md"));
   } catch {
     return false;