@cleocode/core 2026.10.4 → 2026.10.5-rc.ci.672

package/dist/store/restore-store.js

@@ -0,0 +1,391 @@
+/**
+ * Restore the live project `cleo.db` from a named snapshot or a backup id,
+ * safely (T13240). The project store holds the tasks AND the brain tables
+ * (`tasks.db` and `brain.db` are only labels on older backups), so this one
+ * restore covers both.
+ *
+ * The order is what makes it safe:
+ *
+ * 1. Resolve the source: a snapshot file under this project's
+ *    `.cleo/backups/` (another location only with `allowExternal`), or the
+ *    store file of a backup id (`.cleo/backups/sqlite/<id>.meta.json`). A
+ *    snapshot with a non-empty `-wal` beside it is refused: its newest
+ *    commits are not in the file.
+ * 2. Copy it to a private file next to the live store and verify the COPY
+ *    (what is placed is exactly what was checked): a SQLite header,
+ *    `PRAGMA integrity_check` = ok, and a project store's shape.
+ * 3. Refuse while anything else uses the live store: this process's handles
+ *    are closed first, then any live writer lease of another process, or any
+ *    other connection holding the file open, refuses (re-checked under the
+ *    first-open lock that a store's first open also takes).
+ * 4. Under that lock, keep the replaced store: copy it (with its `-wal`),
+ *    fold the WAL into the copy, and list it as a `pre-restore-*` backup, so
+ *    `--id` undoes the restore.
+ * 5. Remove the live `-wal`/`-shm`/`-journal` (they belong to the replaced
+ *    file), rename the verified copy over `cleo.db`, and check the result.
+ *
+ * Residual: a process that opens the store between the check under the lock
+ * and the rename (milliseconds; a first open waits on the same lock).
+ *
+ * @task T13240
+ * @module store/restore-store
+ */
+import { closeSync, copyFileSync, existsSync, fsyncSync, mkdirSync, openSync, readSync, realpathSync, renameSync, rmSync, statSync, unlinkSync, writeFileSync, } from 'node:fs';
+import { basename, dirname, isAbsolute, join, relative, resolve } from 'node:path';
+import { ExitCode } from '@cleocode/contracts/exit-codes.js';
+import { CleoError } from '../errors.js';
+import { getLogger } from '../logger.js';
+import { formatBackupTimestamp } from './backup-sidecar.js';
+import { resolveDualScopeDbPath } from './dual-scope-db.js';
+import { withLock } from './lock.js';
+import { openCleoDbSnapshot } from './open-cleo-db.js';
+import { writeRestoreMarker } from './restore-marker.js';
+import { assertRestoreTargetConfirmed } from './worktree-isolation-guard.js';
+import { foreignWriterLeases, storeOpenElsewhere } from './writer-lease.js';
+/** A project store's file sidecars, in the order SQLite reads them. */
+const SIDECARS = ['-wal', '-shm', '-journal'];
+/** Backup ids are plain names: no separators, no traversal. */
+const BACKUP_ID = /^[A-Za-z0-9][A-Za-z0-9._-]{0,127}$/;
+/** Store-file labels a backup may carry, newest name first; all hold the same file. */
+const STORE_LABELS = ['cleo.db', 'tasks.db', 'brain.db'];
+const SQLITE_HEADER = 'SQLite format 3\u0000';
+function restoreError(code, id, message, fix) {
+    // @sync-invariant none:local-only a refused restore of the whole local store file; no synced row is written
+    return new CleoError(code, `${id}: ${message}`, fix ? { fix } : undefined);
+}
+/** Whether `child` is `parent` or inside it (both resolved). */
+function isInside(parent, child) {
+    const rel = relative(parent, child);
+    return rel === '' || (!rel.startsWith('..') && !isAbsolute(rel));
+}
+/** Resolve the source file: a named snapshot, or the store file of a backup id. */
+function resolveSource(opts, cleoDir) {
+    const backups = join(cleoDir, 'backups');
+    if ((opts.snapshot === undefined) === (opts.backupId === undefined)) {
+        // @sync-invariant none:input-shape exactly one restore source must be named
+        throw restoreError(ExitCode.INVALID_INPUT, 'E_RESTORE_SOURCE', 'name exactly one source: --snapshot <file> or --id <backupId>');
+    }
+    if (opts.backupId !== undefined) {
+        const id = opts.backupId;
+        if (!BACKUP_ID.test(id)) {
+            // @sync-invariant none:input-shape a backup id is a plain name
+            throw restoreError(ExitCode.INVALID_INPUT, 'E_RESTORE_SOURCE', `invalid backup id: ${id}`);
+        }
+        const dir = join(backups, 'sqlite');
+        if (!existsSync(join(dir, `${id}.meta.json`))) {
+            // @sync-invariant none:input-shape no such backup
+            throw restoreError(ExitCode.NOT_FOUND, 'E_RESTORE_SOURCE', `backup not found: ${id}`, 'list them with `cleo backup list`');
+        }
+        const file = STORE_LABELS.map((label) => join(dir, `${label}.${id}`)).find((p) => existsSync(p));
+        if (!file) {
+            // @sync-invariant none:input-shape the backup holds no store file
+            throw restoreError(ExitCode.NOT_FOUND, 'E_RESTORE_SOURCE', `backup ${id} holds no store file (${STORE_LABELS.map((l) => `${l}.${id}`).join(', ')})`);
+        }
+        return { kind: 'backup', path: file, backupId: id };
+    }
+    const named = resolve(opts.cwd, String(opts.snapshot));
+    if (!existsSync(named) || !statSync(named).isFile()) {
+        // @sync-invariant none:input-shape the named snapshot does not exist
+        throw restoreError(ExitCode.NOT_FOUND, 'E_RESTORE_SOURCE', `no snapshot file at ${named}`);
+    }
+    const real = realpathSync(named);
+    const inBackups = existsSync(backups) && isInside(realpathSync(backups), real);
+    if (!inBackups && opts.allowExternal !== true) {
+        // @sync-invariant none:input-shape a file outside this project's backups may be another store
+        throw restoreError(ExitCode.INVALID_INPUT, 'E_RESTORE_EXTERNAL', `${real} is not under ${backups}; it may be another project's store`, 'pass --allow-external if this file really is a snapshot of this project');
+    }
+    return { kind: 'snapshot', path: real, backupId: null };
+}
+/** Refuse a snapshot whose own WAL holds commits the file lacks. */
+function assertSelfContained(source) {
+    const wal = `${source}-wal`;
+    if (existsSync(wal) && statSync(wal).size > 0) {
+        // @sync-invariant none:input-shape a snapshot with a live WAL is incomplete
+        throw restoreError(ExitCode.VALIDATION_ERROR, 'E_RESTORE_SNAPSHOT_INCOMPLETE', `${source} has a non-empty ${basename(wal)}: its newest commits are not in the file`, 'restore from a VACUUM INTO snapshot (cleo backup add), or checkpoint the copy first');
+    }
+}
+/** Whether `file` starts with the SQLite header. */
+function hasSqliteHeader(file) {
+    const fd = openSync(file, 'r');
+    try {
+        const buf = Buffer.alloc(SQLITE_HEADER.length);
+        const n = readSync(fd, buf, 0, buf.length, 0);
+        return n === buf.length && buf.toString('latin1') === SQLITE_HEADER;
+    }
+    finally {
+        closeSync(fd);
+    }
+}
+/**
+ * Verify a snapshot file read-only: the header, `PRAGMA integrity_check`, and
+ * a project store's shape (`tasks_tasks`). Throws on any failure.
+ */
+function verifySnapshot(file, scope = 'project') {
+    const sizeBytes = statSync(file).size;
+    if (sizeBytes === 0 || !hasSqliteHeader(file)) {
+        // @sync-invariant none:input-shape not a SQLite database
+        throw restoreError(ExitCode.VALIDATION_ERROR, 'E_RESTORE_SNAPSHOT_CORRUPT', `${file} is not a SQLite database (${sizeBytes} bytes, no header)`);
+    }
+    let snap;
+    try {
+        snap = openCleoDbSnapshot(file, { readOnly: true, applyPragmas: false });
+        const rows = snap.db.prepare('PRAGMA integrity_check').all();
+        const integrity = rows.map((r) => r.integrity_check).join('; ');
+        if (integrity !== 'ok') {
+            // @sync-invariant none:input-shape the snapshot fails its integrity check
+            throw restoreError(ExitCode.VALIDATION_ERROR, 'E_RESTORE_SNAPSHOT_CORRUPT', `${file} fails integrity_check: ${integrity.slice(0, 500)}`);
+        }
+        const db = snap.db;
+        const has = (table) => db.prepare("SELECT 1 FROM sqlite_master WHERE type = 'table' AND name = ?").get(table) !==
+            undefined;
+        // A project store holds the task tables; the global store holds the
+        // nexus registry and no task tables. Neither is ever placed as the other.
+        const shaped = scope === 'project'
+            ? has('tasks_tasks')
+            : has('nexus_project_registry') && !has('tasks_tasks');
+        if (!shaped) {
+            // @sync-invariant none:input-shape not a store of this scope
+            throw restoreError(ExitCode.VALIDATION_ERROR, 'E_RESTORE_SNAPSHOT_SHAPE', scope === 'project'
+                ? `${file} is not a project cleo.db (no tasks_tasks table)`
+                : `${file} is not the global cleo.db (no nexus_project_registry table, or it holds task tables)`);
+        }
+        const tasks = has('tasks_tasks')
+            ? db.prepare('SELECT count(*) AS n FROM tasks_tasks').get().n
+            : 0;
+        return { integrity, tasks, sizeBytes };
+    }
+    catch (err) {
+        if (err instanceof CleoError)
+            throw err;
+        // @sync-invariant none:input-shape the snapshot cannot be read as a database
+        throw restoreError(ExitCode.VALIDATION_ERROR, 'E_RESTORE_SNAPSHOT_CORRUPT', `${file} cannot be read: ${err instanceof Error ? err.message : String(err)}`);
+    }
+    finally {
+        snap?.close();
+    }
+}
+/**
+ * Refuse while another process uses the live store. This process's own
+ * handles are closed first.
+ */
+async function assertQuiescent(target, assumeStoppedIfUnverifiable = false, scope = 'project') {
+    // Nearly every cleo process opens the global store, so a global restore
+    // usually waits for all of them (T13245).
+    const globalHint = scope === 'global'
+        ? ' The global store is open in nearly every cleo process: stop ALL of them (agent sessions, daemons, Studio), then retry.'
+        : '';
+    const { closeAllDatabases } = await import('./sqlite.js');
+    await closeAllDatabases();
+    const { _resetDualScopeDbCache } = await import('./dual-scope-db.js');
+    _resetDualScopeDbCache();
+    if (!existsSync(target))
+        return;
+    let held;
+    let open;
+    try {
+        held = foreignWriterLeases(target);
+        open = storeOpenElsewhere(target);
+    }
+    catch (err) {
+        // A damaged live store cannot be probed; the operator vouched that
+        // every cleo process is stopped.
+        if (assumeStoppedIfUnverifiable)
+            return;
+        // @sync-invariant none:local-only the liveness of the store cannot be checked; nothing is written
+        throw restoreError(ExitCode.LOCK_TIMEOUT, 'E_RESTORE_STORE_BUSY', `cannot check whether another process uses ${target}: ${err instanceof Error ? err.message : String(err)}`, 'stop every cleo process (sessions, daemons, agents), then run it again with --force');
+    }
+    if (held.length > 0) {
+        // @sync-invariant none:local-only another process holds a writer lease; nothing is written
+        throw restoreError(ExitCode.LOCK_TIMEOUT, 'E_RESTORE_STORE_BUSY', `another cleo process is writing to ${target} (${held.map((h) => `${h.lane} lane, pid ${h.holderPid}`).join('; ')}); restoring now would lose its writes`, `wait for it to finish (or stop it), then run it again.${globalHint}`);
+    }
+    if (open) {
+        // @sync-invariant none:local-only another connection holds the store open; nothing is written
+        throw restoreError(ExitCode.LOCK_TIMEOUT, 'E_RESTORE_STORE_BUSY', `another process has ${target} open (a cleo session, daemon or tool); it would keep writing to the replaced store`, `close it (end the session, \`cleo daemon stop\`), then run it again.${globalHint}`);
+    }
+}
+/** Copy `from` to `to` and flush it to disk. */
+function copyDurable(from, to) {
+    copyFileSync(from, to);
+    const fd = openSync(to, 'r+');
+    try {
+        fsyncSync(fd);
+    }
+    finally {
+        closeSync(fd);
+    }
+}
+/**
+ * Keep the live store before it is replaced: copy it with its sidecars, fold
+ * the WAL into the copy (a writable private copy, so the live file is never
+ * opened), and list it as a backup so `--id` restores it.
+ */
+function keepLiveStore(target, sqliteDir, now) {
+    mkdirSync(sqliteDir, { recursive: true });
+    let backupId = `pre-restore-${formatBackupTimestamp(now)}`;
+    for (let n = 2; existsSync(join(sqliteDir, `${backupId}.meta.json`)); n++) {
+        backupId = `pre-restore-${formatBackupTimestamp(now)}-${n}`;
+    }
+    const kept = join(sqliteDir, `cleo.db.${backupId}`);
+    copyDurable(target, kept);
+    for (const s of SIDECARS) {
+        if (existsSync(target + s))
+            copyDurable(target + s, kept + s);
+    }
+    let checkpointed = false;
+    let db;
+    try {
+        db = openCleoDbSnapshot(kept, { readOnly: false, applyPragmas: false }).db;
+        db.exec('PRAGMA wal_checkpoint(TRUNCATE)');
+        db.close();
+        db = undefined;
+        checkpointed = true;
+    }
+    catch {
+        // A damaged live store: its raw files are kept as they are.
+    }
+    finally {
+        db?.close();
+    }
+    // After a clean checkpoint the copy is self-contained; its sidecars go.
+    const sidecars = [];
+    for (const s of SIDECARS) {
+        const p = kept + s;
+        if (!existsSync(p))
+            continue;
+        if (checkpointed)
+            rmSync(p, { force: true });
+        else {
+            // Named so the backup list treats them as part of this backup.
+            const named = join(sqliteDir, `cleo.db${s}.${backupId}`);
+            renameSync(p, named);
+            sidecars.push(named);
+        }
+    }
+    writeFileSync(join(sqliteDir, `${backupId}.meta.json`), `${JSON.stringify({
+        backupId,
+        type: 'pre-restore',
+        timestamp: now.toISOString(),
+        note: `the live cleo.db replaced by a restore (T13240)${checkpointed ? '' : '; its WAL could not be folded in, raw sidecars kept'}`,
+        files: ['cleo.db'],
+        pinned: true,
+        pinnedReason: 'undo of a store restore',
+    }, null, 2)}\n`);
+    return { backupId, path: kept, checkpointed, sidecars };
+}
+/**
+ * Restore the live project `cleo.db` from a named snapshot or a backup id
+ * (T13240). See the module comment for the order of the steps.
+ *
+ * @param opts - The source, the project and the guards.
+ * @returns What was verified, kept and placed (or would be, on a dry run).
+ * @throws {CleoError} `E_RESTORE_SOURCE`, `E_RESTORE_EXTERNAL`,
+ *   `E_RESTORE_SNAPSHOT_INCOMPLETE`, `E_RESTORE_SNAPSHOT_CORRUPT`,
+ *   `E_RESTORE_SNAPSHOT_SHAPE`, `E_RESTORE_STORE_BUSY`, or the worktree guard's refusal.
+ * @task T13240
+ */
+export async function restoreStoreSnapshot(opts) {
+    const scope = opts.scope ?? 'project';
+    const target = scope === 'project'
+        ? resolveDualScopeDbPath('project', opts.projectRoot)
+        : resolveDualScopeDbPath('global');
+    const cleoDir = dirname(target);
+    const source = resolveSource(opts, cleoDir);
+    const live = existsSync(target) ? realpathSync(target) : target;
+    if ([live, ...SIDECARS.map((x) => live + x)].includes(source.path)) {
+        // @sync-invariant none:input-shape the live store cannot be its own snapshot
+        throw restoreError(ExitCode.INVALID_INPUT, 'E_RESTORE_SOURCE', 'the source is the live store');
+    }
+    assertSelfContained(source.path);
+    if (opts.dryRun === true) {
+        return {
+            dryRun: true,
+            scope,
+            restored: false,
+            target,
+            source,
+            verification: verifySnapshot(source.path, scope),
+            kept: null,
+            removedSidecars: [],
+            undo: null,
+        };
+    }
+    // A worktree may hold its own project store, never its own global one.
+    if (scope === 'project') {
+        assertRestoreTargetConfirmed(opts.projectRoot, {
+            cwd: opts.cwd,
+            confirmOwnerStore: opts.confirmOwnerStore,
+        });
+    }
+    // The private copy is what gets verified and placed.
+    mkdirSync(cleoDir, { recursive: true });
+    const staged = `${target}.restore-${process.pid}-${Date.now()}`;
+    copyDurable(source.path, staged);
+    try {
+        const verification = verifySnapshot(staged, scope);
+        await assertQuiescent(target, opts.assumeStoppedIfUnverifiable === true, scope);
+        const now = opts.now ?? new Date();
+        const sqliteDir = join(cleoDir, 'backups', 'sqlite');
+        const { FIRST_OPEN_LOCK_SUFFIX } = await import('./sqlite.js');
+        const placed = await withLock(`${target}${FIRST_OPEN_LOCK_SUFFIX}`, async () => {
+            // T13258: from here until the swap is done, every store open (they
+            // never take this lock) waits on, then refuses, this marker.
+            const release = writeRestoreMarker(target, 'restore');
+            try {
+                await assertQuiescent(target, opts.assumeStoppedIfUnverifiable === true, scope);
+                const kept = existsSync(target) ? keepLiveStore(target, sqliteDir, now) : null;
+                const removed = [];
+                for (const s of SIDECARS) {
+                    if (existsSync(target + s)) {
+                        unlinkSync(target + s);
+                        removed.push(target + s);
+                    }
+                }
+                opts.beforeSwap?.();
+                renameSync(staged, target);
+                assertNoStraySidecars(target, kept);
+                return { kept, removed };
+            }
+            finally {
+                release();
+            }
+        });
+        // The placed file is the verified copy; check it reads in place.
+        const after = verifySnapshot(target, scope);
+        getLogger('store-restore').warn({ target, source: source.path, kept: placed.kept?.path ?? null, tasks: after.tasks }, `${scope} store restored from a snapshot (T13240)`);
+        return {
+            dryRun: false,
+            scope,
+            restored: true,
+            target,
+            source,
+            verification,
+            kept: placed.kept,
+            removedSidecars: placed.removed,
+            undo: placed.kept
+                ? `cleo restore backup${scope === 'global' ? ' --scope global' : ''} --id ${placed.kept.backupId}`
+                : null,
+        };
+    }
+    finally {
+        // Verifying a WAL-mode copy can leave its own sidecars beside it.
+        for (const p of [staged, ...SIDECARS.map((x) => staged + x)])
+            rmSync(p, { force: true });
+    }
+}
+/**
+ * After the swap, still under the marker: a `-wal`/`-shm`/`-journal` beside
+ * the restored file was created by something that opened the OLD file inside
+ * the window (the restore removed every sidecar before the rename). Its pages
+ * belong to the replaced database, so it is removed before anything reads the
+ * restored file, and the restore fails loudly (T13258).
+ */
+function assertNoStraySidecars(target, kept) {
+    const stray = SIDECARS.map((s) => target + s).filter((p) => existsSync(p));
+    if (stray.length === 0)
+        return;
+    for (const p of stray)
+        rmSync(p, { force: true });
+    // @sync-invariant none:local-only a raced local store swap; the stray sidecars of the replaced file are removed, no synced row is written
+    throw restoreError(ExitCode.CONCURRENT_MODIFICATION, 'E_RESTORE_RACED', `another process opened ${target} during the swap and left ${stray.map((p) => basename(p)).join(', ')} (removed: they belong to the replaced store)`, `stop every cleo process, run \`PRAGMA integrity_check\` on the store (cleo doctor), and re-run the restore${kept ? `; the replaced store is kept as backup ${kept.backupId}` : ''}`);
+}
+//# sourceMappingURL=restore-store.js.map

package/dist/store/restore-store.js.map

@@ -0,0 +1 @@
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package/dist/store/row-identity.d.ts

@@ -62,7 +62,7 @@
  * @epic T12323
  */
 import type { DatabaseSync } from 'node:sqlite';
-import type { TableScope } from '@cleocode/contracts';
+import type { RowIdentityShareSignal, RowIdentityShareState, TableScope } from '@cleocode/contracts';
 import { BIRTH_FP_COLUMN, ROW_IDENTITY, rowIdentityColumns, rowIdentitySpec, UID_COLUMN } from './row-identity-registry.js';
 export { BIRTH_FP_COLUMN, ROW_IDENTITY, rowIdentityColumns, rowIdentitySpec, UID_COLUMN };
 /** Domain separator hashed into every deterministic uid. Changing it re-keys every row. */
@@ -90,6 +90,8 @@ export interface RowIdentityWriters {
     writeRowIdentityMetaNative(db: DatabaseSync, key: string, value: string): void;
     fillIdentityColumnNative(db: DatabaseSync, table: string, column: string, valueSql: string, rowid?: number): number;
     clearBirthFpNative(db: DatabaseSync, table: string, rowid: number): void;
+    /** Set the given identity columns of every row of `table` to NULL (T13231 full refill). */
+    clearIdentityColumnsNative(db: DatabaseSync, table: string, columns: readonly string[]): void;
 }
 /**
  * Register the chokepoint's row-identity writers (called once by
@@ -383,6 +385,91 @@ export declare function ensureIdentityTables(db: DatabaseSync): string[];
  * @returns The pre-release fingerprint, or `null` when the table had none.
  */
 export declare function preReleaseBirthFp(db: DatabaseSync, table: string, row: Readonly<Record<string, UidInput>>): string | null;
+/** Options of {@link rowIdentityShareState}. */
+export interface RowIdentityShareOptions {
+    /**
+     * Cleo Nexus answered, on every linked origin, that it holds no checkpoint
+     * and no journal segment of this project (`cleo doctor row-identity
+     * --refill`): the `nexus-linked-no-vault` signal is resolved. Every other
+     * signal still counts.
+     */
+    readonly nexusCheckedNone?: boolean;
+}
+/**
+ * Decide, strictly, whether a project store's row identity is unshared
+ * (T13231). Every signal that the uids may have left the store, or that
+ * local journal state references them, makes it `shared`; any record that
+ * cannot be read makes it `unknown`:
+ *
+ * - the shared marker (`row_identity_synced`: a receive or a send happened);
+ * - `sync.seal`/`sync.push`/`sync.pull` on;
+ * - rows in any `_sync_*` table except `_sync_meta`, `_sync_replica` and
+ *   `_sync_clock` (captures, frames, row meta and repair baselines, undo
+ *   images, sealed ops, the ledger, inbox, conflicts: all keyed by uid; a
+ *   table added later counts by default);
+ * - `suspect:` or `baseline:` keys in `_sync_meta` (journal state about this
+ *   store a refill would invalidate);
+ * - identity aliases exist (a re-key, re-mint or split-brain import pointed
+ *   at uids);
+ * - the store was rebound: a `_sync_replica` row not bound at `genesis`, or
+ *   more than one row (a copy, move or restore);
+ * - a vault snapshot of this store root was pushed or restored (an entry in
+ *   `<CLEO_HOME>/nexus-vault.json` with a checkpoint or a push in flight);
+ * - the project is linked to Cleo Nexus with no local vault entry for this
+ *   root: the path-keyed vault state cannot rule out a push from a moved path
+ *   or another CLEO_HOME, so this is `unknown` (resolved only by asking
+ *   Nexus: {@link RowIdentityShareOptions.nexusCheckedNone}).
+ *
+ * @param db - Connection on a project `cleo.db` (its file locates the root).
+ * @param options - Whether Cleo Nexus was asked and answered "none".
+ * @returns The state and the signals behind it.
+ * @task T13231
+ */
+export declare function rowIdentityShareState(db: DatabaseSync, options?: RowIdentityShareOptions): RowIdentityShareState;
+/**
+ * Fold signals into a verdict: any `shared` signal makes it `shared`, else any
+ * `unknown` one makes it `unknown`, else `unshared`.
+ *
+ * @param signals - Every signal found.
+ * @returns The verdict.
+ * @task T13231
+ */
+export declare function shareStateOf(signals: readonly RowIdentityShareSignal[]): RowIdentityShareState;
+/** Meta key recording the snapshot taken before the last full identity refill (T13231). */
+export declare const ROW_IDENTITY_REFILL_SNAPSHOT_KEY = "row_identity_refill_snapshot";
+/**
+ * Take the pre-refill snapshot when this open's refill will re-derive the
+ * store from scratch (stale marker, identity values present, provably
+ * unshared). A `VACUUM INTO` cannot run inside a transaction, so a caller that
+ * runs the fill inside a bracket (identity-fill.ts) takes it first and passes
+ * it in through `prepareRowIdentity`'s `refillSnapshot` option.
+ *
+ * @param db - Connection on a project `cleo.db`, outside any transaction.
+ * @param scope - The store's scope.
+ * @param share - Share-state options (whether Cleo Nexus answered "none").
+ * @returns The snapshot path, or `null` when no full refill is due.
+ * @task T13231
+ */
+export declare function snapshotIfFullRefillDue(db: DatabaseSync, scope: TableScope, share?: RowIdentityShareOptions): string | null;
+/**
+ * Whether the store's identity follows the current recipe (its marker is
+ * {@link ROW_IDENTITY_RECIPE}): no refill is due. Read-only.
+ *
+ * @param db - Connection on a project `cleo.db` (read-only is fine).
+ * @returns `true` when the marker is current.
+ * @task T13231
+ */
+export declare function rowIdentityRecipeCurrent(db: DatabaseSync): boolean;
+/**
+ * What a full from-scratch refill clears: per declared table (alias tables
+ * excluded), the rows carrying any identity value, plus the AC uid graveyard
+ * rows under its table name. Read-only.
+ *
+ * @param db - Connection on a project `cleo.db` (read-only is fine).
+ * @returns Row count per table; tables with nothing to clear are omitted.
+ * @task T13231
+ */
+export declare function fullRefillPlan(db: DatabaseSync): Record<string, number>;
 /**
  * Record that the store's identity values follow {@link ROW_IDENTITY_RECIPE}.
  * The fill writes it; {@link markRowIdentityShared} writes it too on the
@@ -473,8 +560,43 @@ export declare function readRowIdentityHealHistory(db: DatabaseSync): RowIdentit
  * @task T12878
  */
 export declare function missingRowIdentitySchema(db: DatabaseSync): string[];
+/**
+ * What the fill would do on this open, found by index probes alone (T12341
+ * C1). A store the fill has already run on answers `[]` and the open skips the
+ * fill pass (and never loads its writers). Every probe is correct regardless
+ * of rowid reuse: it looks for the rows themselves, never a rowid watermark.
+ *
+ * - `schema`: part of the identity schema, or a fill partial index, is missing
+ *   (the full pass creates it);
+ * - `recipe`: the recipe marker is missing or stale (the refill runs, or is
+ *   refused and reported once uids have synced);
+ * - `graveyard:<n>`: an older build deleted acceptance criteria whose uids wait
+ *   to be re-linked;
+ * - `uid:<table>`: a row without a uid (the unique uid index, or the uid
+ *   primary key, holds the NULLs);
+ * - `birth_fp:<table>`: a minted row without a birth fingerprint (the partial
+ *   index {@link birthFpNullIndex});
+ * - `ref:<table>.<column>`: a NULL stored reference fact that now resolves
+ *   (its column index holds the NULLs; a reference that still dangles is not
+ *   work).
+ *
+ * Requires {@link registerRowUidFunction} on the connection (the stored
+ * reference probe evaluates the AC text hash).
+ *
+ * @param db - Connection on a `cleo.db`.
+ * @param scope - The store's scope.
+ * @returns The pending work, `[]` when the identity is complete.
+ * @task T12341
+ */
+export declare function rowIdentityFillPending(db: DatabaseSync, scope: TableScope): string[];
 export declare function prepareRowIdentity(db: DatabaseSync, scope: TableScope, options?: {
     readonly triggers?: boolean;
     readonly writers?: RowIdentityWriters;
+    /** A pre-refill snapshot the caller took outside its transaction ({@link snapshotIfFullRefillDue}). */
+    readonly refillSnapshot?: string | null;
+    /** Share-state options: Cleo Nexus answered "none" (`cleo doctor row-identity --refill`). */
+    readonly share?: RowIdentityShareOptions;
+    /** The caller's {@link rowIdentityFillPending} result, to avoid probing twice. */
+    readonly pending?: readonly string[];
 }): RowUidFillReport | null;
 //# sourceMappingURL=row-identity.d.ts.map

package/dist/store/row-identity.d.ts.map

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