@cleocode/contracts 2026.10.5 → 2026.10.6

package/dist/release/plan.d.ts.map

@@ -1 +1 @@
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package/dist/release/plan.js

@@ -320,8 +320,12 @@ export const ReleasePlanSchema = z.object({
     scheme: ReleaseSchemeSchema,
     /** npm dist-tag channel for this release. */
     channel: ReleaseChannelSchema,
-    /** Epic ID this release ships. */
-    epicId: NonEmptyString,
+    /**
+     * Epic ID this release ships: the `--epic` epic or the `--saga` saga. `null`
+     * for a `--tasks` plan, whose tasks may span several epics; each task's own
+     * epic is on its `epicAncestor` (T13323).
+     */
+    epicId: NonEmptyString.nullable(),
     /** Release-kind classification. */
     releaseKind: ReleaseKindSchema,
     /** ISO-8601 timestamp the plan was written. */

package/dist/release/plan.js.map

@@ -1 +1 @@
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package/dist/row-identity.d.ts

@@ -205,5 +205,7 @@ export interface RowIdentityRefillReport {
     readonly snapshot: string | null;
     /** `--apply`: how to undo the refill. */
     readonly undo: string | null;
+    /** Whether this run cleared a recorded refusal, so the next open re-evaluates (T13305). */
+    readonly refusalCleared: boolean;
 }
 //# sourceMappingURL=row-identity.d.ts.map

package/dist/row-identity.d.ts.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cleocode/contracts",
-  "version": "2026.10.5",
+  "version": "2026.10.6",
   "description": "Domain types, interfaces, and contracts for the CLEO ecosystem",
   "type": "module",
   "main": "./dist/index.js",
@@ -202,7 +202,7 @@
   "dependencies": {
     "zod": "^4.3.6",
     "zod-to-json-schema": "^3.25.2",
-    "@cleocode/lafs": "2026.10.5"
+    "@cleocode/lafs": "2026.10.6"
   },
   "scripts": {
     "build": "tsc -b --force && node scripts/copy-assets.mjs && node scripts/emit-schemas.mjs",

package/src/__tests__/db-inventory.test.ts

@@ -181,4 +181,28 @@ describe('CLEO database inventory (T10305 SSoT)', () => {
       }
     }
   });
+
+  it('names no pre-consolidation file as a live store (T13245)', () => {
+    // tasks, brain and conduit live in the consolidated project cleo.db.
+    for (const role of ['tasks', 'brain', 'conduit']) {
+      const entry = DB_INVENTORY.find((e) => e.role === role);
+      expect(entry?.filePathTemplate, role).toBe('<projectRoot>/.cleo/cleo.db');
+      expect(entry?.legacyFilePathTemplate, role).toBe(`<projectRoot>/.cleo/${role}.db`);
+      expect(entry?.migrationsDir, role).toBe('packages/core/migrations/drizzle-cleo-project/');
+    }
+    // No role's live path is another role's legacy file.
+    const legacy = new Set(
+      DB_INVENTORY.map((e) => e.legacyFilePathTemplate).filter((t): t is string => t !== undefined),
+    );
+    for (const entry of DB_INVENTORY) {
+      expect(legacy.has(entry.filePathTemplate), `${entry.role} names a legacy file as live`).toBe(
+        false,
+      );
+      if (entry.legacyFilePathTemplate !== undefined) {
+        expect(entry.legacyFilePathTemplate.startsWith('<projectRoot>/')).toBe(
+          entry.tier === 'project',
+        );
+      }
+    }
+  });
 });

package/src/caamp-markers.ts

@@ -190,6 +190,16 @@ export const CAAMP_SOURCE_STAMP_PATTERN_SOURCE = '^<!-- CAAMP:SOURCE (\\S+) ([a-
  */
 export const GLOBAL_INSTRUCTION_HUB_REFERENCE = '@~/.agents/AGENTS.md';
 
+/**
+ * The command an owner runs to regenerate their user-global provider
+ * instruction files. CLEO itself never writes those files (T13409): its
+ * bootstrap, upgrade and session-start refresh only report them as stale and
+ * name this command.
+ *
+ * @task T13409
+ */
+export const GLOBAL_INSTRUCTION_REFRESH_COMMAND = 'caamp instructions update --global';
+
 /**
  * Delivery state of one global provider instruction file.
  *
@@ -246,10 +256,17 @@ export interface GlobalInstructionStalenessReport {
  * - `unresolved` — the hub could not be resolved into a complete delivery; nothing was written.
  * - `no-providers` — no provider installation was detected.
  * - `dry-run` — the planned targets were computed without writing.
+ * - `refused` — the caller is not a user-run command; nothing was written (T13409).
  *
  * @task T12377
+ * @task T13409
  */
-export type GlobalInstructionSyncStatus = 'synced' | 'unresolved' | 'no-providers' | 'dry-run';
+export type GlobalInstructionSyncStatus =
+  | 'synced'
+  | 'unresolved'
+  | 'no-providers'
+  | 'dry-run'
+  | 'refused';
 
 /**
  * One provider instruction file targeted by a global regeneration.

package/src/db-inventory.json

@@ -8,41 +8,44 @@
     {
       "role": "tasks",
       "tier": "project",
-      "filePathTemplate": "<projectRoot>/.cleo/tasks.db",
+      "filePathTemplate": "<projectRoot>/.cleo/cleo.db",
+      "legacyFilePathTemplate": "<projectRoot>/.cleo/tasks.db",
       "drizzleSchemaPath": "packages/core/src/store/tasks-schema.ts",
-      "migrationsDir": "packages/core/migrations/drizzle-tasks/",
+      "migrationsDir": "packages/core/migrations/drizzle-cleo-project/",
       "ownerPackage": "@cleocode/core",
-      "openedVia": "openCleoDb('tasks', cwd)",
+      "openedVia": "getDb(cwd) — binds the consolidated project store .cleo/cleo.db (openDualScopeDb('project'); E6). The legacy per-domain file is read only by exodus.",
       "concurrency": "single-writer",
       "privacy": "local-only",
-      "backupPath": ".cleo/backups/sqlite/tasks-YYYYMMDD-HHmmss.db",
-      "documentedIn": "ADR-068 row 1; ADR-013 §9"
+      "backupPath": ".cleo/backups/sqlite/tasks-YYYYMMDD-HHmmss.db (session-end snapshot of .cleo/cleo.db) or .cleo/backups/sqlite/cleo.db.<backupId> (cleo backup add)",
+      "documentedIn": "ADR-068 row 1; ADR-013 §9; T13245 (live store is .cleo/cleo.db)"
     },
     {
       "role": "brain",
       "tier": "project",
-      "filePathTemplate": "<projectRoot>/.cleo/brain.db",
+      "filePathTemplate": "<projectRoot>/.cleo/cleo.db",
+      "legacyFilePathTemplate": "<projectRoot>/.cleo/brain.db",
       "drizzleSchemaPath": "packages/core/src/store/schema/memory-schema.ts",
-      "migrationsDir": "packages/core/migrations/drizzle-brain/",
+      "migrationsDir": "packages/core/migrations/drizzle-cleo-project/",
       "ownerPackage": "@cleocode/brain",
-      "openedVia": "openCleoDb('brain', cwd)",
+      "openedVia": "getBrainDb(cwd) — binds the consolidated project store .cleo/cleo.db (openDualScopeDb('project'); E6). The legacy per-domain file is read only by exodus.",
       "concurrency": "single-writer",
       "privacy": "local-only-pii",
-      "backupPath": ".cleo/backups/sqlite/brain-YYYYMMDD-HHmmss.db",
-      "documentedIn": "ADR-068 row 2; ADR-013 §9; audit §2 (P0 malformed 2026-05-23)"
+      "backupPath": ".cleo/backups/sqlite/brain-YYYYMMDD-HHmmss.db (session-end snapshot of .cleo/cleo.db) or .cleo/backups/sqlite/cleo.db.<backupId> (cleo backup add)",
+      "documentedIn": "ADR-068 row 2; ADR-013 §9; audit §2 (P0 malformed 2026-05-23); T13245 (live store is .cleo/cleo.db)"
     },
     {
       "role": "conduit",
       "tier": "project",
-      "filePathTemplate": "<projectRoot>/.cleo/conduit.db",
+      "filePathTemplate": "<projectRoot>/.cleo/cleo.db",
+      "legacyFilePathTemplate": "<projectRoot>/.cleo/conduit.db",
       "drizzleSchemaPath": "packages/core/src/store/schema/conduit-schema.ts",
-      "migrationsDir": "packages/core/migrations/drizzle-conduit/",
+      "migrationsDir": "packages/core/migrations/drizzle-cleo-project/",
       "ownerPackage": "@cleocode/core",
-      "openedVia": "openCleoDb('conduit', cwd)",
+      "openedVia": "ensureConduitDb(cwd) — binds the consolidated project store .cleo/cleo.db (openDualScopeDb('project'); E6). The legacy per-domain file is read only by exodus.",
       "concurrency": "single-writer",
       "privacy": "local-only",
-      "backupPath": ".cleo/backups/sqlite/conduit-YYYYMMDD-HHmmss.db",
-      "documentedIn": "ADR-068 row 3; ADR-037 (signaldock→conduit split)"
+      "backupPath": ".cleo/backups/sqlite/conduit-YYYYMMDD-HHmmss.db (session-end snapshot of .cleo/cleo.db) or .cleo/backups/sqlite/cleo.db.<backupId> (cleo backup add)",
+      "documentedIn": "ADR-068 row 3; ADR-037 (signaldock→conduit split); T13245 (live store is .cleo/cleo.db)"
     },
     {
       "role": "manifest",

package/src/db-inventory.ts

@@ -155,6 +155,14 @@ export interface DbInventoryEntry {
    * Substitution convention is documented on {@link DbInventoryEntry}.
    */
   readonly filePathTemplate: string;
+  /**
+   * The role's pre-consolidation file (same tokens as `filePathTemplate`),
+   * when the role now lives in a consolidated store: `tasks`, `brain` and
+   * `conduit` live in `<projectRoot>/.cleo/cleo.db`, and their old
+   * `tasks.db` / `brain.db` / `conduit.db` are read only by exodus. Never a
+   * live store (T13245).
+   */
+  readonly legacyFilePathTemplate?: string;
   /**
    * Repo-relative path to the Drizzle schema TypeScript file. `null` when
    * the schema is owned by an upstream library or the role is reserved.

package/src/doctor.ts

@@ -1131,14 +1131,31 @@ export interface SupersededStoreConflict {
    * neither renumbers nor copies the legacy task. `withheld-undecided`: a
    * task-graph table such a run did not copy at all, so the undecided task's
    * children, dependencies and criteria cannot attach to the live task.
+   * `deleted-live` (bare-strands mode, T13309): the row is, or refers to, a
+   * task the live store recorded as deleted, so copying it would resurrect
+   * it. `parent-absent` (bare-strands mode): the row refers to a task that
+   * neither the live store nor the copy holds. `parent-skipped`
+   * (bare-strands mode, T13334): the row refers to a bare task the same run
+   * skipped, so copying it would dangle. `carried-then-deleted`
+   * (bare-strands mode): an earlier reconcile copied the row into the twin
+   * (its copy receipt is in the store) and the runtime deleted it since.
    */
   reason:
     | 'live-authoritative'
     | 'collides-with-live'
     | 'id-collision-undecided'
-    | 'withheld-undecided';
+    | 'withheld-undecided'
+    | 'deleted-live'
+    | 'parent-absent'
+    | 'parent-skipped'
+    | 'carried-then-deleted';
   /** The legacy ids left uncopied, when the run can name them. */
   ids?: string[];
+  /**
+   * Bare-strands mode (T13309): every skipped row's primary key (every column
+   * for a keyless table), as a JSON array, so an operator can see each one.
+   */
+  keys?: string[];
 }
 
 /**
@@ -1174,13 +1191,15 @@ export interface SupersededStoreIdRemap {
 }
 
 /**
- * One bare legacy table of the live store a reconcile carried: its row count
+ * One bare legacy table of the live store a reconcile (full or bare-strands
+ * mode) carried: its row count
  * and key digest when the run verified (T13319). The run records it in the
  * store (T13320) and in its receipt; the sync refusal for stranded bare rows
  * stands down for a table that still matches, so a row the runtime later
  * deletes from the prefixed twin is never mistaken for one never carried.
  *
  * @task T13319
+ * @task T13309
  */
 export interface SupersededStoreBareAccount {
   /** The bare table, e.g. `task_labels`. */
@@ -1222,8 +1241,13 @@ export interface SupersededStoreReconcileResult {
    * `additive` — for a project already running on the consolidated store:
    * copy only rows whose keys are absent from live history tables, never
    * touch the live task graph, and list everything left in `conflicts`.
+   * `bare-strands` (T13309) — for a project already running on the
+   * consolidated store whose live `cleo.db` still holds bare legacy rows its
+   * prefixed tables lack: copy those rows (renumbering a task whose id a
+   * different live task took), never overwrite a live row, and list every row
+   * deliberately skipped in `conflicts`.
    */
-  mode: 'full' | 'additive';
+  mode: 'full' | 'additive' | 'bare-strands';
   /**
    * Legacy rows deliberately left uncopied: additive mode's live-authoritative
    * tables, and in full mode the task-id collisions the run cannot decide.
@@ -1258,10 +1282,15 @@ export interface SupersededStoreReconcileResult {
   /** Human-readable explanation, suitable for printing verbatim. */
   reason: string;
   /**
-   * The live store's bare tables this run carried, on a `reconciled` receipt
-   * that copied the bare family (T13319). Audit only: the sync check reads the
-   * record the run wrote into the store itself, which travels with backups
-   * (T13320).
+   * The live store's bare tables this run carried (full mode) or settled
+   * (bare-strands mode), on a `reconciled` receipt (T13319, T13309). Audit
+   * only: the sync check reads the record the run wrote into the store itself,
+   * which travels with backups (T13320).
    */
   accounted?: SupersededStoreBareAccount[];
+  /**
+   * Bare-strands mode: the `VACUUM INTO` snapshot of the live store taken
+   * before the copy, or `null` when no copy ran (T13309).
+   */
+  snapshotPath?: string | null;
 }

package/src/done-plan.ts

@@ -66,6 +66,7 @@ export type DonePlanBlockerCode =
   | 'tool-unresolved'
   | 'tool-failed'
   | 'typed-gate-failed'
+  | 'test-run-needed'
   | 'ac-mapping-needed'
   | 'manual-gate'
   | 'epic-rollup'

package/src/graph.ts

@@ -707,6 +707,35 @@ export interface GraphIndexFilePage {
   rows: GraphIndexFileReport[];
 }
 
+/** Extraction limitation of one retained reference. */
+export type GraphIndexReferenceKind = GraphIndexReferenceReport['kind'];
+
+/** Retained references per limitation kind; every kind is present, zero included. */
+export type GraphIndexReferenceKindCounts = Record<GraphIndexReferenceKind, number>;
+
+/**
+ * One page of an assessment's retained references, in stored order (T13330).
+ *
+ * The list grows with the repository — 846 151 references, over 500 MB of
+ * JSON, on one 5 357-file project — so it is only ever returned a page at a time.
+ */
+export interface GraphIndexReferencePage {
+  /** References skipped before this page. */
+  offset: number;
+  /** Requested page size. */
+  limit: number;
+  /** Only references of this kind were paged; absent when unfiltered. */
+  kind?: GraphIndexReferenceKind;
+  /** References matching the filter, before paging. */
+  total: number;
+  /** References in this page. */
+  returned: number;
+  /** Offset of the next page; null when this page reaches the end. */
+  nextOffset: number | null;
+  /** The page itself. */
+  rows: GraphIndexReferenceReport[];
+}
+
 /**
  * Bounded status projection of a {@link GraphIndexAssessment} (T12560).
  *
@@ -725,6 +754,13 @@ export interface GraphIndexAssessmentProjection extends Omit<GraphIndexAssessmen
   filesByStatus: GraphIndexFileStatusCounts;
   /** The requested page of file rows; absent when `files` is complete. */
   filesPage?: GraphIndexFilePage;
+  /** Retained references per kind; present when references were requested (T13330). */
+  referencesByKind?: GraphIndexReferenceKindCounts;
+  /**
+   * The requested page of retained references (T13330). `references` itself is
+   * never returned by status; `_withheld.references` carries its UTF-8 JSON size.
+   */
+  referencesPage?: GraphIndexReferencePage;
 }
 
 /** Validated rows staged before an atomic graph publication. */

package/src/index.ts

@@ -754,6 +754,9 @@ export type {
   GraphIndexFileStatus,
   GraphIndexFileStatusCounts,
   GraphIndexFreshness,
+  GraphIndexReferenceKind,
+  GraphIndexReferenceKindCounts,
+  GraphIndexReferencePage,
   GraphIndexReferenceReport,
   GraphIndexRunSummary,
   GraphNode,
@@ -2028,6 +2031,8 @@ export type {
   WorktreeLockAcquisitionStatus,
   WorktreeLockHolder,
   WorktreeLockRecord,
+  WorktreeLockSessionProbe,
+  WorktreeLockSessionState,
   WorktreeSource,
   WorktreeStatusCategory,
 } from './operations/worktree.js';

package/src/nexus-cloud.ts

@@ -602,6 +602,18 @@ export interface CloudStatusHeld {
   readonly warnDays: number;
 }
 
+/** `CloudStatusSyncStream.undo`: the store's undo against its budget (journal spec §3.5 Rule 2, D5). */
+export interface CloudStatusUndoBudget {
+  /** Undo payload bytes held for unsequenced local transactions. */
+  readonly bytes: number;
+  /** The budget in bytes (256 MiB by default). */
+  readonly budget: number;
+  /** `warn` from 80% (pull to drain it); `exceeded` at 100%, which persists until a rebind. */
+  readonly state: 'ok' | 'warn' | 'exceeded';
+  /** When undo first reached the budget (a rebind is scheduled for the next pull), or `null`. */
+  readonly exceededAt: string | null;
+}
+
 export interface CloudStatusSyncStream {
   /** Which store. */
   readonly scope: 'project' | 'global';
@@ -625,6 +637,8 @@ export interface CloudStatusSyncStream {
   readonly suspectTables: readonly string[];
   /** Local writes a sync rebase holds, until their echo is decided (§3.5 Rule 5). */
   readonly held: CloudStatusHeld;
+  /** Undo held against its budget (§3.5 Rule 2, D5). */
+  readonly undo: CloudStatusUndoBudget;
   /** Sealed ops not yet handed to the outbox for sending. */
   readonly unsentOps: CloudSyncFact<number>;
   /** The last sequence this store pushed to the server. */

package/src/operations/docs.ts

@@ -168,6 +168,10 @@ export interface DocsAttachmentRow {
   ownerId?: string;
   /** Owner type (only populated by `docs list --project`). */
   ownerType?: AttachmentOwnerType;
+  /** Display title (only populated by fetch/view envelopes, T13352). */
+  title?: string;
+  /** Backing blob name, e.g. `spec.md` (only populated by fetch/view envelopes, T13352). */
+  blobName?: string;
 }
 
 /**
@@ -352,9 +356,18 @@ export interface DocsFetchResult {
   path?: string;
   /** Total size in bytes. */
   sizeBytes: number;
-  /** Base64-encoded content (only for attachments <= 1 MB). */
+  /**
+   * Decoded UTF-8 content, populated by default for text MIME types
+   * (<= 1 MB) so consumers read text docs without a base64 round-trip
+   * (T13352). Binary docs carry {@link bytesBase64} instead.
+   */
+  content?: string;
+  /**
+   * Base64-encoded content — only for NON-text attachments <= 1 MB
+   * (T13352; text docs carry {@link content} instead).
+   */
   bytesBase64?: string;
-  /** True when bytesBase64 is populated. */
+  /** True when content or bytesBase64 is populated. */
   inlined: boolean;
   /** Current attachment backend in use. */
   attachmentBackend?: AttachmentBackend;

package/src/operations/worktree.ts

@@ -195,9 +195,26 @@ export interface WorktreeLockAcquisition {
   /** The previous holder's record when the lock was reclaimed. */
   reclaimedFrom?: WorktreeLockRecord;
   /** Why the previous holder was judged dead (`reclaimed` only). */
-  reclaimReason?: 'pid-gone' | 'pid-recycled' | 'heartbeat-stale' | 'unreadable';
+  reclaimReason?: 'pid-gone' | 'pid-recycled' | 'heartbeat-stale' | 'unreadable' | 'session-ended';
 }
 
+/**
+ * Whether a worktree lock holder's CLEO session is still live (T13425).
+ *
+ * `active` keeps the lock held whatever the owner pid says, `ended` releases it
+ * even while the owner pid (a long-lived harness shared across sessions) is
+ * alive, and `unknown` leaves the verdict to the pid and heartbeat checks.
+ */
+export type WorktreeLockSessionState = 'active' | 'ended' | 'unknown';
+
+/**
+ * Reports a lock holder session's state; supplied by core, which owns the
+ * session store (`@cleocode/worktree` cannot read it).
+ *
+ * @task T13425
+ */
+export type WorktreeLockSessionProbe = (sessionId: string) => WorktreeLockSessionState;
+
 // ---------------------------------------------------------------------------
 // Create operation
 // ---------------------------------------------------------------------------
@@ -286,6 +303,13 @@ export interface CreateWorktreeOptions {
    * @task T12506
    */
   holder?: WorktreeLockHolder;
+  /**
+   * Reports the existing lock holder's session state: an ended holder session
+   * makes the lock reclaimable even while its owner pid is alive (T13425).
+   *
+   * @task T13425
+   */
+  sessionProbe?: WorktreeLockSessionProbe;
   /**
    * Heartbeat age (ms) beyond which an existing lock is reclaimable even when
    * its owner pid is alive. Defaults to `CLEO_WORKTREE_LOCK_TTL_MS` or 4 hours.
@@ -724,7 +748,9 @@ export type WorktreeLifecycleAction =
   | 'complete-skip'
   | 'complete-manual'
   | 'complete-conflict'
-  | 'adopt';
+  | 'adopt'
+  | 'lock-release'
+  | 'lock-reclaim';
 
 /**
  * One append-only entry written to `.cleo/audit/worktree-lifecycle.jsonl` by

package/src/release/plan.ts

@@ -360,8 +360,12 @@ export const ReleasePlanSchema = z.object({
   scheme: ReleaseSchemeSchema,
   /** npm dist-tag channel for this release. */
   channel: ReleaseChannelSchema,
-  /** Epic ID this release ships. */
-  epicId: NonEmptyString,
+  /**
+   * Epic ID this release ships: the `--epic` epic or the `--saga` saga. `null`
+   * for a `--tasks` plan, whose tasks may span several epics; each task's own
+   * epic is on its `epicAncestor` (T13323).
+   */
+  epicId: NonEmptyString.nullable(),
   /** Release-kind classification. */
   releaseKind: ReleaseKindSchema,
   /** ISO-8601 timestamp the plan was written. */

package/src/row-identity.ts

@@ -227,4 +227,6 @@ export interface RowIdentityRefillReport {
   readonly snapshot: string | null;
   /** `--apply`: how to undo the refill. */
   readonly undo: string | null;
+  /** Whether this run cleared a recorded refusal, so the next open re-evaluates (T13305). */
+  readonly refusalCleared: boolean;
 }