@cleocode/cleo 2026.3.62 → 2026.3.64

package/dist/mcp/index.js

@@ -10670,6 +10670,25 @@ function runBrainMigrations(nativeDb, db) {
       );
     }
   }
+  if (tableExists(nativeDb, "__drizzle_migrations") && tableExists(nativeDb, "brain_decisions")) {
+    const localMigrations = readMigrationFiles({ migrationsFolder });
+    const localHashes = new Set(localMigrations.map((m) => m.hash));
+    const dbEntries = nativeDb.prepare('SELECT hash FROM "__drizzle_migrations"').all();
+    const hasOrphanedEntries = dbEntries.some((e) => !localHashes.has(e.hash));
+    if (hasOrphanedEntries) {
+      const log11 = getLogger("brain");
+      log11.warn(
+        { orphaned: dbEntries.filter((e) => !localHashes.has(e.hash)).length },
+        "Detected stale migration journal entries from a previous CLEO version. Reconciling brain.db."
+      );
+      nativeDb.exec('DELETE FROM "__drizzle_migrations"');
+      for (const m of localMigrations) {
+        nativeDb.exec(
+          `INSERT INTO "__drizzle_migrations" ("hash", "created_at") VALUES ('${m.hash}', ${m.folderMillis})`
+        );
+      }
+    }
+  }
   const MAX_RETRIES = 5;
   const BASE_DELAY_MS = 100;
   const MAX_DELAY_MS = 2e3;
@@ -10777,6 +10796,7 @@ var init_brain_sqlite = __esm({
     init_migrator();
     init_node_sqlite();
     init_migrator2();
+    init_logger();
     init_paths();
     init_brain_schema();
     init_sqlite2();
@@ -15391,6 +15411,9 @@ function createPage(input) {
   };
 }
 function paginate(items, limit, offset) {
+  if (!items || items.length === 0) {
+    return { items: [], page: { mode: "none" } };
+  }
   const total = items.length;
   if (limit === void 0 && offset === void 0) {
     return { items, page: { mode: "none" } };
@@ -88185,14 +88208,19 @@ async function taskCreate(projectRoot, params) {
         size: params.size,
         acceptance: params.acceptance,
         notes: params.notes,
-        files: params.files
+        files: params.files,
+        dryRun: params.dryRun
       },
       projectRoot,
       accessor
     );
     return {
       success: true,
-      data: { task: taskToRecord(result.task), duplicate: result.duplicate ?? false }
+      data: {
+        task: taskToRecord(result.task),
+        duplicate: result.duplicate ?? false,
+        dryRun: params.dryRun
+      }
     };
   } catch (err) {
     const cleoErr = err;
@@ -89479,8 +89507,12 @@ var AdminHandler = class {
         }
         case "backup": {
           const result = systemListBackups(projectRoot);
+          if (!result.success || !result.data) {
+            return wrapResult(result, "query", "admin", operation, startTime);
+          }
+          const backups = result.data;
           return wrapResult(
-            { success: true, data: { backups: result, count: result.length } },
+            { success: true, data: { backups, count: backups.length } },
             "query",
             "admin",
             operation,
@@ -93429,7 +93461,8 @@ var TasksHandler = class {
             phase: params?.phase,
             size: params?.size,
             notes: params?.notes,
-            files: params?.files
+            files: params?.files,
+            dryRun: params?.dryRun
           });
           return wrapResult(result, "mutate", "tasks", operation, startTime);
         }