@claude-flow/memory 3.0.2 → 3.0.4

package/dist/agentdb-backend-lock.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=agentdb-backend-lock.test.d.ts.map

package/dist/agentdb-backend-lock.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"agentdb-backend-lock.test.d.ts","sourceRoot":"","sources":["../src/agentdb-backend-lock.test.ts"],"names":[],"mappings":""}

package/dist/agentdb-backend-lock.test.js

@@ -0,0 +1,60 @@
+/**
+ * Unmocked end-to-end: AgentDBBackend (forceWasm) -> real AgentDB -> real
+ * agentdb sql.js save with a stale dead-PID `<db>.agentdb.lock`.
+ * Persistence is verified with better-sqlite3 (not sql.js).
+ */
+import { describe, it, expect, beforeAll, beforeEach, afterEach } from 'vitest';
+import * as fs from 'node:fs';
+import * as os from 'node:os';
+import * as path from 'node:path';
+import Database from 'better-sqlite3';
+import { AgentDBBackend } from './agentdb-backend.js';
+import { AgentdbLockError } from './agentdb-lock-guard.js';
+const DEAD_PID = 2_147_483_000;
+let dir;
+let dbFile;
+let lockFile;
+function plant(pid) {
+    fs.writeFileSync(lockFile, `${pid}\n`);
+    const old = new Date(Date.now() - 3600_000);
+    fs.utimesSync(lockFile, old, old);
+}
+const mk = () => new AgentDBBackend({ dbPath: dbFile, namespace: 'lock', vectorDimension: 384, forceWasm: true });
+// AgentDB's forceWasm still picks better-sqlite3 inside db-fallback unless this is set.
+beforeAll(() => { process.env.AGENTDB_FORCE_SQLJS = '1'; });
+beforeEach(() => {
+    dir = fs.mkdtempSync(path.join(os.tmpdir(), 'backend-lock-'));
+    dbFile = path.join(dir, 'agentdb-memory.db');
+    lockFile = `${dbFile}.agentdb.lock`;
+});
+afterEach(() => fs.rmSync(dir, { recursive: true, force: true }));
+describe('AgentDBBackend with real sql.js agentdb and a lock file', () => {
+    it('dead-PID lock: initialize + store + shutdown persists the row and clears the lock', async () => {
+        plant(DEAD_PID);
+        const b = mk();
+        await b.initialize();
+        const raw = b.getAgentDB().database;
+        expect(raw.constructor.name).toBe('SqlJsDatabase'); // proves the locked sql.js path is exercised
+        raw.exec('CREATE TABLE memory_entries(content TEXT)');
+        raw.exec("INSERT INTO memory_entries VALUES('survives stale lock')");
+        await b.shutdown();
+        expect(fs.existsSync(lockFile)).toBe(false);
+        const db = new Database(dbFile, { readonly: true });
+        try {
+            const rows = db.prepare('SELECT content FROM memory_entries').all();
+            expect(rows.map((r) => r.content)).toContain('survives stale lock');
+        }
+        finally {
+            db.close();
+        }
+    });
+    it('live-holder lock: shutdown rejects with AgentdbLockError and leaves the lock', async () => {
+        const b = mk();
+        await b.initialize();
+        b.getAgentDB().database.exec('CREATE TABLE t(x)');
+        plant(process.ppid);
+        await expect(b.shutdown()).rejects.toBeInstanceOf(AgentdbLockError);
+        expect(fs.existsSync(lockFile)).toBe(true);
+    });
+});
+//# sourceMappingURL=agentdb-backend-lock.test.js.map

package/dist/agentdb-backend-lock.test.js.map

@@ -0,0 +1 @@
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package/dist/agentdb-backend.d.ts.map

@@ -1 +1 @@
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package/dist/agentdb-backend.js

@@ -9,8 +9,10 @@
  *
  * @module v3/memory/agentdb-backend
  */
+import { withAgentdbLockRecovery, closeWithAgentdbLockRecovery } from './agentdb-lock-guard.js';
 import { EventEmitter } from 'node:events';
 import { safeJsonParse } from './json-security.js';
+import { useHostSqliteDriver } from './agentdb-native-driver.js';
 import { AgentDbRetrievalGuard, isRetrievalGuardEnabled, } from './agentdb-retrieval-guard.js';
 // ===== AgentDB Optional Import =====
 let AgentDB;
@@ -107,13 +109,6 @@ export class AgentDBBackend extends EventEmitter {
         }
         try {
             // Initialize AgentDB with config
-            this.agentdb = new AgentDB({
-                dbPath: this.config.dbPath || ':memory:',
-                namespace: this.config.namespace,
-                forceWasm: this.config.forceWasm,
-                vectorBackend: this.config.vectorBackend,
-                vectorDimension: this.config.vectorDimension,
-            });
             // Suppress agentdb's noisy console.log during init
             // (EmbeddingService, AgentDB core emit info-level logs we don't need)
             const origLog = console.log;
@@ -127,7 +122,20 @@ export class AgentDBBackend extends EventEmitter {
                 origLog.apply(console, args);
             };
             try {
-                await this.agentdb.initialize();
+                // A stale `<db>.agentdb.lock` left by a dead writer is cleared (only
+                // when provably stale) and init retried once with a fresh instance.
+                await withAgentdbLockRecovery(this.config.dbPath, async () => {
+                    this.agentdb = new AgentDB({
+                        dbPath: this.config.dbPath || ':memory:',
+                        namespace: this.config.namespace,
+                        forceWasm: this.config.forceWasm,
+                        vectorBackend: this.config.vectorBackend,
+                        vectorDimension: this.config.vectorDimension,
+                    });
+                    // Keep agentdb's nested better-sqlite3 11.x out of the process (Node 24 abort).
+                    useHostSqliteDriver(this.agentdb);
+                    await this.agentdb.initialize();
+                });
             }
             finally {
                 console.log = origLog;
@@ -154,7 +162,16 @@ export class AgentDBBackend extends EventEmitter {
         if (!this.initialized)
             return;
         if (this.agentdb) {
-            await this.agentdb.close();
+            // Clears a provably stale lock first; a persist failure is surfaced
+            // (AgentdbLockError), never swallowed.
+            try {
+                await closeWithAgentdbLockRecovery(this.config.dbPath, () => this.agentdb.close());
+            }
+            finally {
+                this.initialized = false;
+                this.emit('shutdown');
+            }
+            return;
         }
         this.initialized = false;
         this.emit('shutdown');

package/dist/agentdb-backend.js.map

@@ -1 +1 @@
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package/dist/agentdb-lock-guard.d.ts

@@ -0,0 +1,72 @@
+/**
+ * AgentDB sql.js lock guard.
+ *
+ * agentdb >= 3.0.0-alpha.20 protects sql.js saves with an exclusive
+ * `<db>.agentdb.lock` file (created with `wx`, content: the holder's PID) and
+ * throws `AGENTDB_SQLJS_CONCURRENT_MODIFICATION` when the lock exists or the
+ * database file changed under an open handle. A writer that dies between
+ * creating and removing the lock leaves a lock that nothing ever clears, and
+ * every later save then fails.
+ *
+ * This module (1) recognises that error, (2) removes a lock ONLY when it is
+ * provably stale (regular file, exactly `<db>.agentdb.lock`, numeric PID that
+ * is dead, old enough), and (3) retries once. Anything else surfaces as an
+ * actionable `AgentdbLockError`. Writes are never dropped or silently
+ * swallowed here.
+ *
+ * @module v3/memory/agentdb-lock-guard
+ */
+export declare const AGENTDB_CONCURRENT_MODIFICATION_CODE = "AGENTDB_SQLJS_CONCURRENT_MODIFICATION";
+export declare const AGENTDB_LOCK_SUFFIX = ".agentdb.lock";
+/** A lock younger than this is never considered stale (saves take milliseconds). */
+export declare const DEFAULT_MIN_STALE_AGE_MS = 10000;
+export type LockState = 'absent' | 'live' | 'stale' | 'unverifiable';
+export interface LockInspection {
+    state: LockState;
+    /** Path of the lock file that was inspected (the db path plus `.agentdb.lock`). */
+    lockPath: string;
+    pid?: number;
+    reason: string;
+}
+export interface LockGuardOptions {
+    /** Minimum lock age before it may be treated as stale. */
+    minStaleAgeMs?: number;
+    /** Injectable for tests. */
+    isPidAlive?: (pid: number) => boolean;
+    now?: () => number;
+}
+/** Thrown when a lock/concurrency failure cannot be (or was not) safely recovered. */
+export declare class AgentdbLockError extends Error {
+    readonly lockState: LockState;
+    readonly code = "AGENTDB_LOCK_UNRECOVERABLE";
+    constructor(message: string, lockState: LockState, options?: {
+        cause?: unknown;
+    });
+}
+export declare function isConcurrentModificationError(error: unknown): boolean;
+export declare function inspectAgentdbLock(dbPath: string, options?: LockGuardOptions): LockInspection;
+/**
+ * Remove the lock only if it is provably stale. Returns true when a stale lock
+ * was removed. The lock is first renamed aside (atomic) and re-verified as the
+ * very same file that was inspected, so a lock recreated by a live writer in
+ * the meantime is restored instead of deleted.
+ */
+export declare function clearStaleAgentdbLock(dbPath: string, options?: LockGuardOptions): {
+    cleared: boolean;
+    inspection: LockInspection;
+};
+/**
+ * Run `fn`. If it fails with the AgentDB concurrent-modification error AND the
+ * cause is a provably stale lock, clear it and retry exactly once. Otherwise
+ * throw an actionable AgentdbLockError. Errors of other kinds pass through.
+ */
+export declare function withAgentdbLockRecovery<T>(dbPath: string | undefined, fn: () => Promise<T> | T, options?: LockGuardOptions): Promise<T>;
+/**
+ * Close an AgentDB / sql.js handle safely. sql.js `close()` saves and then
+ * destroys the handle even when the save fails, so a failed close cannot be
+ * retried; the only safe recovery is to clear a provably stale lock BEFORE
+ * closing. A concurrency failure that remains is surfaced as AgentdbLockError
+ * (the caller must treat it as "not persisted"), never swallowed.
+ */
+export declare function closeWithAgentdbLockRecovery(dbPath: string | undefined, close: () => Promise<unknown> | unknown, options?: LockGuardOptions): Promise<void>;
+//# sourceMappingURL=agentdb-lock-guard.d.ts.map

package/dist/agentdb-lock-guard.d.ts.map

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package/dist/agentdb-lock-guard.js

@@ -0,0 +1,226 @@
+/**
+ * AgentDB sql.js lock guard.
+ *
+ * agentdb >= 3.0.0-alpha.20 protects sql.js saves with an exclusive
+ * `<db>.agentdb.lock` file (created with `wx`, content: the holder's PID) and
+ * throws `AGENTDB_SQLJS_CONCURRENT_MODIFICATION` when the lock exists or the
+ * database file changed under an open handle. A writer that dies between
+ * creating and removing the lock leaves a lock that nothing ever clears, and
+ * every later save then fails.
+ *
+ * This module (1) recognises that error, (2) removes a lock ONLY when it is
+ * provably stale (regular file, exactly `<db>.agentdb.lock`, numeric PID that
+ * is dead, old enough), and (3) retries once. Anything else surfaces as an
+ * actionable `AgentdbLockError`. Writes are never dropped or silently
+ * swallowed here.
+ *
+ * @module v3/memory/agentdb-lock-guard
+ */
+import * as fs from 'node:fs';
+import * as path from 'node:path';
+import { randomBytes } from 'node:crypto';
+export const AGENTDB_CONCURRENT_MODIFICATION_CODE = 'AGENTDB_SQLJS_CONCURRENT_MODIFICATION';
+export const AGENTDB_LOCK_SUFFIX = '.agentdb.lock';
+/** A lock younger than this is never considered stale (saves take milliseconds). */
+export const DEFAULT_MIN_STALE_AGE_MS = 10_000;
+/** Thrown when a lock/concurrency failure cannot be (or was not) safely recovered. */
+export class AgentdbLockError extends Error {
+    lockState;
+    code = 'AGENTDB_LOCK_UNRECOVERABLE';
+    constructor(message, lockState, options) {
+        super(message);
+        this.lockState = lockState;
+        this.name = 'AgentdbLockError';
+        if (options?.cause !== undefined)
+            this.cause = options.cause;
+    }
+}
+export function isConcurrentModificationError(error) {
+    return (typeof error === 'object' &&
+        error !== null &&
+        error.code === AGENTDB_CONCURRENT_MODIFICATION_CODE);
+}
+function defaultIsPidAlive(pid) {
+    try {
+        process.kill(pid, 0);
+        return true;
+    }
+    catch (e) {
+        // ESRCH: no such process. EPERM: exists but owned by someone else -> alive.
+        return e.code !== 'ESRCH';
+    }
+}
+function lockPathFor(dbPath) {
+    const resolved = path.resolve(dbPath);
+    const lockPath = path.join(path.dirname(resolved), path.basename(resolved) + AGENTDB_LOCK_SUFFIX);
+    return lockPath;
+}
+function readLockNoFollow(lockPath) {
+    let st;
+    try {
+        st = fs.lstatSync(lockPath);
+    }
+    catch (e) {
+        if (e.code === 'ENOENT')
+            return 'absent';
+        throw e;
+    }
+    if (!st.isFile())
+        return 'not-regular'; // symlink, directory, device...
+    const flags = fs.constants.O_RDONLY | (fs.constants.O_NOFOLLOW ?? 0);
+    let fd;
+    try {
+        fd = fs.openSync(lockPath, flags);
+    }
+    catch (e) {
+        const code = e.code;
+        if (code === 'ENOENT')
+            return 'absent';
+        if (code === 'ELOOP')
+            return 'not-regular';
+        throw e;
+    }
+    try {
+        const fst = fs.fstatSync(fd);
+        if (!fst.isFile() || fst.size > 64)
+            return 'not-regular';
+        const buf = Buffer.alloc(Math.max(1, fst.size));
+        const n = fs.readSync(fd, buf, 0, buf.length, 0);
+        return { dev: fst.dev, ino: fst.ino, content: buf.subarray(0, n).toString('utf8'), mtimeMs: fst.mtimeMs };
+    }
+    finally {
+        fs.closeSync(fd);
+    }
+}
+function parsePid(content) {
+    const m = /^(\d{1,10})\n?$/.exec(content);
+    if (!m)
+        return null;
+    const pid = Number(m[1]);
+    return Number.isSafeInteger(pid) && pid > 0 ? pid : null;
+}
+export function inspectAgentdbLock(dbPath, options = {}) {
+    const lockPath = lockPathFor(dbPath);
+    const isAlive = options.isPidAlive ?? defaultIsPidAlive;
+    const now = (options.now ?? Date.now)();
+    const minAge = options.minStaleAgeMs ?? DEFAULT_MIN_STALE_AGE_MS;
+    let snap;
+    try {
+        snap = readLockNoFollow(lockPath);
+    }
+    catch (e) {
+        return { state: 'unverifiable', lockPath, reason: `cannot read lock file (${e.code ?? 'error'})` };
+    }
+    if (snap === 'absent')
+        return { state: 'absent', lockPath, reason: 'no lock file present' };
+    if (snap === 'not-regular') {
+        return { state: 'unverifiable', lockPath, reason: 'lock path is not a small regular file (symlink or unexpected type); refusing to touch it' };
+    }
+    const pid = parsePid(snap.content);
+    if (pid === null)
+        return { state: 'unverifiable', lockPath, reason: 'lock content is not a PID; refusing to touch it' };
+    if (pid === process.pid || isAlive(pid))
+        return { state: 'live', lockPath, pid, reason: `lock holder PID ${pid} is alive` };
+    const age = now - snap.mtimeMs;
+    if (age < minAge) {
+        return { state: 'live', lockPath, pid, reason: `holder PID ${pid} is dead but the lock is only ${Math.round(age)}ms old` };
+    }
+    return { state: 'stale', lockPath, pid, reason: `holder PID ${pid} is dead and the lock is ${Math.round(age / 1000)}s old` };
+}
+/**
+ * Remove the lock only if it is provably stale. Returns true when a stale lock
+ * was removed. The lock is first renamed aside (atomic) and re-verified as the
+ * very same file that was inspected, so a lock recreated by a live writer in
+ * the meantime is restored instead of deleted.
+ */
+export function clearStaleAgentdbLock(dbPath, options = {}) {
+    const inspection = inspectAgentdbLock(dbPath, options);
+    if (inspection.state !== 'stale')
+        return { cleared: false, inspection };
+    const lockPath = inspection.lockPath;
+    const before = readLockNoFollow(lockPath);
+    if (typeof before === 'string')
+        return { cleared: false, inspection: { ...inspection, state: 'unverifiable', reason: 'lock changed during inspection' } };
+    const aside = path.join(path.dirname(lockPath), `.${path.basename(lockPath)}.stale-${process.pid}-${randomBytes(6).toString('hex')}`);
+    try {
+        fs.renameSync(lockPath, aside);
+    }
+    catch (e) {
+        if (e.code === 'ENOENT')
+            return { cleared: false, inspection: { ...inspection, state: 'absent', reason: 'lock vanished before removal' } };
+        return { cleared: false, inspection: { ...inspection, state: 'unverifiable', reason: `cannot move lock aside (${e.code ?? 'error'})` } };
+    }
+    const moved = readLockNoFollow(aside);
+    const same = typeof moved !== 'string' && moved.ino === before.ino && moved.dev === before.dev && moved.content === before.content;
+    if (!same) {
+        // We displaced a different (possibly live) lock. Put it back; never delete it.
+        try {
+            fs.linkSync(aside, lockPath);
+        }
+        catch { /* a newer lock already exists; the displaced one is discarded below */ }
+        try {
+            fs.unlinkSync(aside);
+        }
+        catch { /* best effort */ }
+        return { cleared: false, inspection: { ...inspection, state: 'live', reason: 'lock was replaced during removal; left in place' } };
+    }
+    try {
+        fs.unlinkSync(aside);
+    }
+    catch { /* the stale lock is already out of the way */ }
+    return { cleared: true, inspection };
+}
+/**
+ * Run `fn`. If it fails with the AgentDB concurrent-modification error AND the
+ * cause is a provably stale lock, clear it and retry exactly once. Otherwise
+ * throw an actionable AgentdbLockError. Errors of other kinds pass through.
+ */
+export async function withAgentdbLockRecovery(dbPath, fn, options = {}) {
+    try {
+        return await fn();
+    }
+    catch (error) {
+        if (!isConcurrentModificationError(error) || !dbPath || dbPath === ':memory:')
+            throw error;
+        const { cleared, inspection } = clearStaleAgentdbLock(dbPath, options);
+        if (!cleared) {
+            throw new AgentdbLockError(`AgentDB could not save "${path.basename(dbPath)}": ${inspection.reason}. ` +
+                (inspection.state === 'live'
+                    ? 'Another process is writing this database; retry when it finishes.'
+                    : inspection.state === 'absent'
+                        ? 'The database changed on disk after it was opened; reopen it and retry (no data was overwritten).'
+                        : `If no other process uses this database, remove "${path.basename(inspection.lockPath)}" manually and retry.`), inspection.state, { cause: error });
+        }
+        try {
+            return await fn();
+        }
+        catch (retryError) {
+            if (isConcurrentModificationError(retryError)) {
+                throw new AgentdbLockError(`AgentDB could not save "${path.basename(dbPath)}" even after removing a stale lock (${inspection.reason}); ` +
+                    'another process is writing it. Retry later.', 'live', { cause: retryError });
+            }
+            throw retryError;
+        }
+    }
+}
+/**
+ * Close an AgentDB / sql.js handle safely. sql.js `close()` saves and then
+ * destroys the handle even when the save fails, so a failed close cannot be
+ * retried; the only safe recovery is to clear a provably stale lock BEFORE
+ * closing. A concurrency failure that remains is surfaced as AgentdbLockError
+ * (the caller must treat it as "not persisted"), never swallowed.
+ */
+export async function closeWithAgentdbLockRecovery(dbPath, close, options = {}) {
+    if (dbPath && dbPath !== ':memory:')
+        clearStaleAgentdbLock(dbPath, options);
+    try {
+        await close();
+    }
+    catch (error) {
+        if (!isConcurrentModificationError(error) || !dbPath || dbPath === ':memory:')
+            throw error;
+        const inspection = inspectAgentdbLock(dbPath, options);
+        throw new AgentdbLockError(`AgentDB failed to persist "${path.basename(dbPath)}" on close and the pending changes were NOT saved: ${inspection.reason}.`, inspection.state, { cause: error });
+    }
+}
+//# sourceMappingURL=agentdb-lock-guard.js.map

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package/dist/agentdb-lock-guard.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=agentdb-lock-guard.test.d.ts.map

package/dist/agentdb-lock-guard.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"agentdb-lock-guard.test.d.ts","sourceRoot":"","sources":["../src/agentdb-lock-guard.test.ts"],"names":[],"mappings":""}