@claude-flow/memory 3.0.0-alpha.24 → 3.0.0-alpha.26

package/dist/agentdb-adapter-key-isolation.test.d.ts

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+export {};
+//# sourceMappingURL=agentdb-adapter-key-isolation.test.d.ts.map

package/dist/agentdb-adapter-key-isolation.test.d.ts.map

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+{"version":3,"file":"agentdb-adapter-key-isolation.test.d.ts","sourceRoot":"","sources":["../src/agentdb-adapter-key-isolation.test.ts"],"names":[],"mappings":""}

package/dist/agentdb-adapter-key-isolation.test.js

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+/** Regression coverage for #3358: distinct namespace/key tuples must not evict each other. */
+import { mkdtempSync, readFileSync, rmSync, writeFileSync } from 'node:fs';
+import { tmpdir } from 'node:os';
+import { join } from 'node:path';
+import { afterEach, describe, expect, it } from 'vitest';
+import { AgentDBAdapter } from './agentdb-adapter.js';
+import { MemoryConsolidator } from './consolidator.js';
+import { createDefaultEntry } from './types.js';
+const vector = () => Float32Array.of(1, 0, 0, 0, 0, 0, 0, 0);
+function pair() {
+    const a = createDefaultEntry({ namespace: 'team:alice', key: 'profile', content: 'Alice profile' });
+    const b = createDefaultEntry({ namespace: 'team', key: 'alice:profile', content: 'Other profile' });
+    a.embedding = vector();
+    b.embedding = vector();
+    return [a, b];
+}
+const adapters = [];
+const directories = [];
+async function open(config = {}) {
+    const adapter = new AgentDBAdapter({ dimensions: 8, cacheEnabled: true, ...config });
+    adapters.push(adapter);
+    await adapter.initialize();
+    return adapter;
+}
+function persistence() {
+    const dir = mkdtempSync(join(tmpdir(), 'memory-key-isolation-'));
+    directories.push(dir);
+    return { persistenceEnabled: true, persistencePath: join(dir, 'store') };
+}
+async function expectPair(adapter, a, b) {
+    expect((await adapter.get(a.id))?.id).toBe(a.id);
+    expect((await adapter.get(b.id))?.id).toBe(b.id);
+    expect((await adapter.getByKey(a.namespace, a.key))?.id).toBe(a.id);
+    expect((await adapter.getByKey(b.namespace, b.key))?.id).toBe(b.id);
+    expect((await adapter.search(vector(), { k: 10 })).map(r => r.entry.id).sort()).toEqual([a.id, b.id].sort());
+    for (const entry of [a, b]) {
+        expect((await adapter.query({ type: 'prefix', namespace: entry.namespace, keyPrefix: '', limit: 10 })).map(e => e.id)).toEqual([entry.id]);
+        expect((await adapter.query({ type: 'exact', namespace: entry.namespace, key: entry.key, limit: 10 })).map(e => e.id)).toEqual([entry.id]);
+    }
+}
+afterEach(async () => {
+    for (const adapter of adapters.splice(0))
+        await adapter.shutdown();
+    for (const dir of directories.splice(0))
+        rmSync(dir, { recursive: true, force: true });
+});
+describe('namespace/key isolation (#3358)', () => {
+    it.each(['scalar', 'batch', 'pre-existing then batch'])('preserves colliding legacy tuples through %s writes', async (mode) => {
+        const adapter = await open();
+        const [a, b] = pair();
+        if (mode === 'batch')
+            await adapter.bulkInsert([a, b]);
+        else {
+            await adapter.store(a);
+            if (mode === 'scalar')
+                await adapter.store(b);
+            else
+                await adapter.bulkInsert([b]);
+        }
+        await expectPair(adapter, a, b);
+    });
+    it.each(['scalar', 'batch'])('still replaces an identical tuple through %s writes without deleting the neighboring tuple', async (mode) => {
+        const adapter = await open();
+        const [a, b] = pair();
+        await adapter.store(a);
+        await adapter.store(b);
+        const replacement = createDefaultEntry({ namespace: a.namespace, key: a.key, content: 'Updated Alice profile' });
+        replacement.embedding = vector();
+        if (mode === 'scalar')
+            await adapter.store(replacement);
+        else
+            await adapter.bulkInsert([replacement]);
+        expect(await adapter.get(a.id)).toBeNull();
+        await expectPair(adapter, replacement, b);
+    });
+    it.each(['delete', 'bulkDelete', 'clearNamespace'])('%s removes only the requested tuple and clears its lookup', async (mode) => {
+        const adapter = await open();
+        const [a, b] = pair();
+        await adapter.bulkInsert([a, b]);
+        if (mode === 'delete')
+            await adapter.delete(a.id);
+        else if (mode === 'bulkDelete')
+            await adapter.bulkDelete([a.id]);
+        else
+            await adapter.clearNamespace(a.namespace);
+        expect(await adapter.get(a.id)).toBeNull();
+        expect(await adapter.getByKey(a.namespace, a.key)).toBeNull();
+        expect((await adapter.getByKey(b.namespace, b.key))?.id).toBe(b.id);
+        expect((await adapter.search(vector(), { k: 10 })).map(r => r.entry.id)).toEqual([b.id]);
+    });
+    it('matches prefixes against raw keys, including quotes, slashes and Unicode', async () => {
+        const adapter = await open();
+        const namespace = 'team:"\\雪';
+        const matching = createDefaultEntry({ namespace, key: '"\\雪:profile', content: 'matching' });
+        const otherKey = createDefaultEntry({ namespace, key: 'elsewhere', content: 'other key' });
+        const otherNamespace = createDefaultEntry({ namespace: `${namespace}:child`, key: matching.key, content: 'other namespace' });
+        await adapter.bulkInsert([matching, otherKey, otherNamespace]);
+        expect((await adapter.getByKey(namespace, matching.key))?.id).toBe(matching.id);
+        expect((await adapter.query({ type: 'prefix', namespace, keyPrefix: '"\\雪:', limit: 10 })).map(e => e.id)).toEqual([matching.id]);
+    });
+    it('preserves both tuples and subsequent same-tuple replacement across restarts', async () => {
+        const config = persistence();
+        const first = await open(config);
+        const [a, b] = pair();
+        await first.bulkInsert([a, b]);
+        await first.shutdown();
+        const reloaded = await open(config);
+        await expectPair(reloaded, a, b);
+        const replacement = createDefaultEntry({ namespace: a.namespace, key: a.key, content: 'Updated Alice profile' });
+        replacement.embedding = vector();
+        await reloaded.store(replacement);
+        await reloaded.shutdown();
+        const again = await open(config);
+        expect(await again.get(a.id)).toBeNull();
+        await expectPair(again, replacement, b);
+    });
+    it.each(['delete', 'bulkDelete'])('loads v1 colliding keys and preserves the saved winner when %s removes a stale duplicate', async (mode) => {
+        const config = persistence();
+        const first = await open(config);
+        const [a, b] = pair();
+        const winner = createDefaultEntry({ namespace: 'dup', key: 'duplicate', content: 'winner' });
+        const stale = createDefaultEntry({ namespace: 'dup', key: 'temporary', content: 'stale' });
+        // Persisted entry order must not accidentally choose the intended winner.
+        winner.id = 'a-winner';
+        stale.id = 'z-stale';
+        await first.bulkInsert([a, b, winner, stale]);
+        await first.shutdown();
+        const metaPath = `${config.persistencePath}.meta.json`;
+        const meta = JSON.parse(readFileSync(metaPath, 'utf8'));
+        meta.version = 1;
+        meta.entries.find((e) => e.id === stale.id).key = winner.key;
+        // An authentic v1 index could only retain B for the colliding pair,
+        // while same-tuple orphans remained in entries under distinct IDs.
+        meta.keyIndex = { 'team:alice:profile': b.id, 'dup:duplicate': winner.id };
+        writeFileSync(metaPath, JSON.stringify(meta));
+        const reloaded = await open(config);
+        await expectPair(reloaded, a, b);
+        expect((await reloaded.getByKey('dup', 'duplicate'))?.id).toBe(winner.id);
+        expect((await reloaded.get(stale.id))?.id).toBe(stale.id);
+        if (mode === 'delete')
+            await reloaded.delete(stale.id);
+        else
+            await reloaded.bulkDelete([stale.id]);
+        expect(await reloaded.get(stale.id)).toBeNull();
+        expect((await reloaded.getByKey('dup', 'duplicate'))?.id).toBe(winner.id);
+        await reloaded.shutdown();
+        expect(JSON.parse(readFileSync(metaPath, 'utf8')).version).toBe(2);
+        const again = await open(config);
+        await expectPair(again, a, b);
+        expect((await again.getByKey('dup', 'duplicate'))?.id).toBe(winner.id);
+    });
+    it.each(['sweep', 'dedup'])('clears the encoded lookup during consolidator %s', async (mode) => {
+        const adapter = await open();
+        const [a, b] = pair();
+        if (mode === 'sweep')
+            a.expiresAt = Date.now() - 1000;
+        else {
+            a.content = b.content;
+            a.updatedAt = 1;
+            b.updatedAt = 2;
+        }
+        await adapter.bulkInsert([a, b]);
+        const consolidator = new MemoryConsolidator({ getAdapter: () => adapter }, { similarityThreshold: 1 });
+        if (mode === 'sweep')
+            expect((await consolidator.sweepExpired()).removed).toBe(1);
+        else
+            expect((await consolidator.dedup('keep-newest')).merged).toBe(1);
+        // Both values were cached on insert; a stale keyIndex pointer would
+        // incorrectly return the removed entry from cache even after cleanup.
+        expect(await adapter.getByKey(a.namespace, a.key)).toBeNull();
+        expect((await adapter.getByKey(b.namespace, b.key))?.id).toBe(b.id);
+        expect((await adapter.search(vector(), { k: 10 })).map(r => r.entry.id)).toEqual([b.id]);
+    });
+});
+//# sourceMappingURL=agentdb-adapter-key-isolation.test.js.map

package/dist/agentdb-adapter-key-isolation.test.js.map

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package/dist/agentdb-adapter-upsert.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=agentdb-adapter-upsert.test.d.ts.map

package/dist/agentdb-adapter-upsert.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"agentdb-adapter-upsert.test.d.ts","sourceRoot":"","sources":["../src/agentdb-adapter-upsert.test.ts"],"names":[],"mappings":""}

package/dist/agentdb-adapter-upsert.test.js

@@ -0,0 +1,216 @@
+/**
+ * Dream Cycle 2026-09-18 (memory) — regression tests for AgentDBAdapter.store()
+ * same-(namespace,key) idempotency.
+ *
+ * Baseline bug: store() minted a fresh random id per call (createDefaultEntry ->
+ * generateMemoryId()) and never looked up an existing entry under the same
+ * (namespace, key) before writing. The prior occupant was left as an orphan:
+ * unreachable via getByKey()/keyIndex, but still present in entries/
+ * namespaceIndex/tagIndex, and — for embedded entries — still a live point in
+ * the HNSW index, so search()/semanticSearch() returned stale duplicates
+ * forever. Fixed by evicting the prior (namespace,key) occupant via a shared
+ * evictEntry() primitive (also used by delete() and bulkInsert()) before
+ * storing the new entry.
+ *
+ * Post-review hardening (same night): an adversarial human review found two
+ * further public-path gaps the first pass missed — bulkInsert() bypassed the
+ * same-key dedup entirely, and store() originally evicted the prior occupant
+ * BEFORE validating the replacement's embedding, so a rejected addPoint()
+ * (dimension mismatch, index full) would delete the old value and still fail,
+ * losing data outright. Both are fixed below; the tests in this second block
+ * cover exactly the five cases the review asked for.
+ */
+import { existsSync, mkdtempSync, rmSync } from 'node:fs';
+import { tmpdir } from 'node:os';
+import { join } from 'node:path';
+import { describe, it, expect, beforeEach } from 'vitest';
+import { AgentDBAdapter } from './agentdb-adapter.js';
+import { createDefaultEntry } from './types.js';
+function unitVector(dims, hotIndex) {
+    const v = new Float32Array(dims);
+    v[hotIndex % dims] = 1;
+    return v;
+}
+function allInNamespace(namespace) {
+    return { type: 'prefix', keyPrefix: '', namespace, limit: 1000 };
+}
+describe('AgentDBAdapter.store() — same-key upsert idempotency (Dream Cycle 2026-09-18)', () => {
+    let adapter;
+    beforeEach(async () => {
+        adapter = new AgentDBAdapter({ dimensions: 8, cacheEnabled: true });
+        await adapter.initialize();
+    });
+    it('a second store() under the same (namespace,key) does not leave two entries reachable', async () => {
+        const first = createDefaultEntry({ key: 'profile', namespace: 'ns1', content: 'v1' });
+        await adapter.store(first);
+        const second = createDefaultEntry({ key: 'profile', namespace: 'ns1', content: 'v2' });
+        await adapter.store(second);
+        expect(first.id).not.toBe(second.id); // ids are independently random, as today
+        const byKey = await adapter.getByKey('ns1', 'profile');
+        expect(byKey?.content).toBe('v2');
+        // The prior occupant must be fully gone, not just unreachable via getByKey.
+        const stale = await adapter.get(first.id);
+        expect(stale).toBeNull();
+        const all = await adapter.query(allInNamespace('ns1'));
+        expect(all.filter((e) => e.key === 'profile')).toHaveLength(1);
+    });
+    it('a second store() under the same (namespace,key) evicts the stale HNSW point, so search() never returns the old content', async () => {
+        const first = createDefaultEntry({ key: 'fact', namespace: 'ns1', content: 'stale-fact' });
+        first.embedding = unitVector(8, 0);
+        await adapter.store(first);
+        const second = createDefaultEntry({ key: 'fact', namespace: 'ns1', content: 'fresh-fact' });
+        second.embedding = unitVector(8, 0); // same embedding direction, different content/id
+        await adapter.store(second);
+        const results = await adapter.search(unitVector(8, 0), { k: 10 });
+        const contents = results.map((r) => r.entry.content);
+        expect(contents).toContain('fresh-fact');
+        expect(contents).not.toContain('stale-fact');
+        expect(contents.filter((c) => c === 'fresh-fact')).toHaveLength(1);
+    });
+    it('storing a genuinely new (namespace,key) is unaffected (no eviction, both entries reachable)', async () => {
+        const a = createDefaultEntry({ key: 'a', namespace: 'ns1', content: 'A' });
+        const b = createDefaultEntry({ key: 'b', namespace: 'ns1', content: 'B' });
+        await adapter.store(a);
+        await adapter.store(b);
+        expect((await adapter.get(a.id))?.content).toBe('A');
+        expect((await adapter.get(b.id))?.content).toBe('B');
+        expect(await adapter.query(allInNamespace('ns1'))).toHaveLength(2);
+    });
+    it('the same (namespace,key) in two different namespaces are independent (no cross-namespace eviction)', async () => {
+        const a = createDefaultEntry({ key: 'shared', namespace: 'ns1', content: 'from-ns1' });
+        const b = createDefaultEntry({ key: 'shared', namespace: 'ns2', content: 'from-ns2' });
+        await adapter.store(a);
+        await adapter.store(b);
+        expect((await adapter.getByKey('ns1', 'shared'))?.content).toBe('from-ns1');
+        expect((await adapter.getByKey('ns2', 'shared'))?.content).toBe('from-ns2');
+    });
+});
+describe('AgentDBAdapter same-key upsert — post-review hardening (Dream Cycle 2026-09-18)', () => {
+    let adapter;
+    beforeEach(async () => {
+        adapter = new AgentDBAdapter({ dimensions: 8, cacheEnabled: true });
+        await adapter.initialize();
+    });
+    it('a replacement rejected by HNSWIndex.addPoint() (dimension mismatch) leaves the prior value intact', async () => {
+        const first = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'original' });
+        first.embedding = unitVector(8, 0);
+        await adapter.store(first);
+        const bad = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'malformed' });
+        bad.embedding = new Float32Array(4); // wrong dimension for this 8-dim adapter
+        await expect(adapter.store(bad)).rejects.toThrow(/dimension mismatch/i);
+        // The prior value must survive a rejected replacement -- not be deleted
+        // and then fail to be replaced (the exact data-loss bug the review found).
+        const byKey = await adapter.getByKey('ns1', 'k');
+        expect(byKey?.content).toBe('original');
+        expect(byKey?.id).toBe(first.id);
+        expect(await adapter.get(first.id)).not.toBeNull();
+    });
+    it('bulkInsert() evicts a duplicate key within the same batch, last entry wins', async () => {
+        const loser = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'first-in-batch' });
+        const winner = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'last-in-batch' });
+        await adapter.bulkInsert([loser, winner]);
+        const byKey = await adapter.getByKey('ns1', 'k');
+        expect(byKey?.content).toBe('last-in-batch');
+        expect(byKey?.id).toBe(winner.id);
+        expect(await adapter.get(loser.id)).toBeNull();
+        expect(await adapter.query(allInNamespace('ns1'))).toHaveLength(1);
+    });
+    it('bulkInsert() evicts a pre-existing store()d entry that a batch replaces', async () => {
+        const preExisting = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'pre-existing' });
+        preExisting.embedding = unitVector(8, 0);
+        await adapter.store(preExisting);
+        const replacement = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'from-batch' });
+        replacement.embedding = unitVector(8, 0);
+        await adapter.bulkInsert([replacement]);
+        expect(await adapter.get(preExisting.id)).toBeNull();
+        const results = await adapter.search(unitVector(8, 0), { k: 10 });
+        const contents = results.map((r) => r.entry.content);
+        expect(contents).toContain('from-batch');
+        expect(contents).not.toContain('pre-existing');
+        expect(await adapter.query(allInNamespace('ns1'))).toHaveLength(1);
+    });
+    it('a same-key replacement survives a persisted save/reload -- only the winner comes back', async () => {
+        const dir = mkdtempSync(join(tmpdir(), 'agentdb-adapter-upsert-'));
+        const persistencePath = join(dir, 'store');
+        try {
+            const first = new AgentDBAdapter({
+                dimensions: 8,
+                cacheEnabled: true,
+                persistenceEnabled: true,
+                persistencePath,
+            });
+            await first.initialize();
+            const original = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'v1' });
+            await first.store(original);
+            const replacement = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'v2' });
+            await first.store(replacement);
+            await first.shutdown(); // persists to disk
+            const reloaded = new AgentDBAdapter({
+                dimensions: 8,
+                cacheEnabled: true,
+                persistenceEnabled: true,
+                persistencePath,
+            });
+            await reloaded.initialize(); // loads from disk
+            const byKey = await reloaded.getByKey('ns1', 'k');
+            expect(byKey?.content).toBe('v2');
+            expect(await reloaded.get(original.id)).toBeNull();
+            expect(await reloaded.query(allInNamespace('ns1'))).toHaveLength(1);
+        }
+        finally {
+            if (existsSync(dir))
+                rmSync(dir, { recursive: true, force: true });
+        }
+    });
+    it('KNOWN LIMITATION (disclosed, not fixed tonight): truly concurrent store() calls for the same key can both proceed and leave two reachable entries', async () => {
+        // No mutex/lock exists around the keyIndex.get() check + writes. Two
+        // store() calls for the same (namespace,key), both parked mid-flight on
+        // an embeddingGenerator await and released in the same tick, can each
+        // resume and read keyIndex before the other has written to it, so
+        // neither evicts the other. A plain setTimeout-based delay does NOT
+        // reliably reproduce this: Node drains the microtask queue (including
+        // every further await inside one resumed call) before the next timer
+        // macrotask runs, so two independently-timed calls tend to fully
+        // serialize instead of interleaving at the check (confirmed: an earlier
+        // version of this test using setTimeout could not reproduce the gap).
+        // Two externally-controlled gates, released back-to-back in the same
+        // synchronous tick after both calls are already parked, force the
+        // actual interleaving this test needs to demonstrate.
+        let releaseA;
+        let releaseB;
+        const gateA = new Promise((resolve) => { releaseA = resolve; });
+        const gateB = new Promise((resolve) => { releaseB = resolve; });
+        const raced = new AgentDBAdapter({
+            dimensions: 8,
+            cacheEnabled: true,
+            embeddingGenerator: (content) => (content === 'from-a' ? gateA : gateB).then(() => unitVector(8, 0)),
+        });
+        await raced.initialize();
+        const a = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'from-a' });
+        const b = createDefaultEntry({ key: 'k', namespace: 'ns1', content: 'from-b' });
+        // Both calls run synchronously up to their embeddingGenerator await and
+        // are now genuinely parked -- store() hasn't read keyIndex yet for
+        // either. Releasing both gates back-to-back interleaves their resumption.
+        const pA = raced.store(a);
+        const pB = raced.store(b);
+        releaseA();
+        releaseB();
+        await Promise.all([pA, pB]);
+        // query()'s prefix search iterates keyIndex, which by construction holds
+        // exactly one id per (namespace,key) -- it structurally cannot see an
+        // orphan still sitting in `entries` under a different id, so it's the
+        // wrong probe here (an earlier version of this test used it and always
+        // saw "1", regardless of whether the race actually happened). get(id)
+        // against each participant's own id is the correct probe, matching how
+        // this file's very first test detects the sequential-case orphan.
+        const aStillPresent = (await raced.get(a.id)) !== null;
+        const bStillPresent = (await raced.get(b.id)) !== null;
+        // Today: both survive concurrently (the bug this test documents) --
+        // neither call's isReplacement check saw the other's write in time. If
+        // this assertion ever starts failing because only one is still present,
+        // the concurrency gap has been fixed -- update this test to assert the
+        // fixed behavior instead of loosening it.
+        expect([aStillPresent, bStillPresent]).toEqual([true, true]);
+    });
+});
+//# sourceMappingURL=agentdb-adapter-upsert.test.js.map

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package/dist/agentdb-adapter.d.ts

@@ -84,6 +84,16 @@ export declare class AgentDBAdapter extends EventEmitter implements IMemoryBacke
      * Delete a memory entry
      */
     delete(id: string): Promise<boolean>;
+    /**
+     * Shared eviction primitive behind delete() and the same-key upsert paths
+     * in store()/bulkInsert() (Dream Cycle 2026-09-18, post-review). Removes
+     * an entry from entries/namespaceIndex/tagIndex/HNSW/cache. touchKeyIndex
+     * is false when the caller is itself about to overwrite the
+     * (namespace,key) -> id mapping to point at a replacement entry —
+     * clearing it here first would either be redone work or, if the mapping
+     * had already been repointed, would incorrectly delete the new mapping.
+     */
+    private evictEntry;
     /**
      * Query memory entries with filters
      */

package/dist/agentdb-adapter.d.ts.map

@@ -1 +1 @@
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