@claude-flow/cli 3.7.0-alpha.7 → 3.7.0-alpha.71

package/dist/src/memory/memory-bridge.d.ts

@@ -278,6 +278,75 @@ export declare function bridgeRecordCausalEdge(options: {
     success: boolean;
     controller: string;
 } | null>;
+/**
+ * Delete a hierarchical-memory entry by key (#1784).
+ *
+ * Reality check: agentdb's HierarchicalMemory class doesn't expose a public
+ * delete API today, so the real-backend path falls back to direct SQL on
+ * the underlying SQLite tables (status flip to 'deleted' + AttestationLog
+ * audit). The bridge-fallback path that bridgeHierarchicalStore uses when
+ * HierarchicalMemory isn't loaded writes plain memory_entries rows that
+ * `bridgeDeleteEntry` already handles.
+ *
+ * Returns { controller: 'native-unsupported' } when the real HM is loaded
+ * and the SQL fallback can't reach its private tables — surfacing the
+ * limitation honestly instead of silently returning success.
+ */
+export declare function bridgeDeleteHierarchical(options: {
+    key: string;
+    tier?: string;
+    dbPath?: string;
+}): Promise<{
+    success: boolean;
+    deleted: boolean;
+    key: string;
+    tier?: string;
+    controller: string;
+    guarded?: boolean;
+    error?: string;
+} | null>;
+/**
+ * Delete a causal edge between two memory entries (#1784).
+ *
+ * The bridge stores fallback edges in namespace='causal-edges' with key
+ * '{sourceId}→{targetId}'. Those CAN be soft-deleted. The native graph-node
+ * backend has no delete API (createNode/createEdge/createHyperedge only),
+ * so an edge that landed in graph-node native storage stays there. We
+ * surface that explicitly via controller: 'native-unsupported'.
+ */
+export declare function bridgeDeleteCausalEdge(options: {
+    sourceId: string;
+    targetId: string;
+    relation?: string;
+    dbPath?: string;
+}): Promise<{
+    success: boolean;
+    deleted: boolean;
+    sourceId: string;
+    targetId: string;
+    controller: string;
+    guarded?: boolean;
+    error?: string;
+} | null>;
+/**
+ * Cascade-delete a causal node and all its incident edges (#1784).
+ *
+ * Same constraint as bridgeDeleteCausalEdge — native graph-node lacks a
+ * delete API. SQL fallback path soft-deletes the node (if stored as a
+ * memory_entries row) and every edge whose key contains the nodeId.
+ */
+export declare function bridgeDeleteCausalNode(options: {
+    nodeId: string;
+    dbPath?: string;
+}): Promise<{
+    success: boolean;
+    deletedNode: boolean;
+    deletedEdges: number;
+    nodeId: string;
+    controller: string;
+    guarded?: boolean;
+    error?: string;
+} | null>;
 /**
  * Start a session with ReflexionMemory episodic replay.
  * Loads relevant past session patterns for the new session.

package/dist/src/memory/memory-bridge.d.ts.map

@@ -1 +1 @@
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package/dist/src/memory/memory-bridge.js

@@ -18,26 +18,50 @@
  */
 import * as path from 'path';
 import * as crypto from 'crypto';
+import { createRequire } from 'node:module';
 // ===== Lazy singleton =====
 let registryPromise = null;
 let registryInstance = null;
 let bridgeAvailable = null;
 /**
  * Resolve database path with path traversal protection.
- * Only allows paths within or below the project's .swarm directory,
+ * Only allows paths within or below the project's working directory,
  * or the special ':memory:' path.
+ *
+ * #1945: the previous hard-coded `<cwd>/.swarm/memory.db` default ignored
+ * `CLAUDE_FLOW_MEMORY_PATH` / `claude-flow.config.json#memory.persistPath`
+ * — so users with non-default memory paths had `memory init` write to e.g.
+ * `data/memory/memory.db` while `bridgeStoreEntry()` wrote to
+ * `.swarm/memory.db`. CLI store reported success against the wrong file and
+ * a fresh process reading the configured path saw nothing.
+ *
+ * Use `getMemoryRoot()` (from memory-initializer) so the bridge and the
+ * initializer agree on the same file. Imported via require() to avoid a
+ * circular ESM dep between memory-initializer.ts and memory-bridge.ts.
  */
 function getDbPath(customPath) {
-    const swarmDir = path.resolve(process.cwd(), '.swarm');
+    let defaultDir = path.resolve(process.cwd(), '.swarm');
+    try {
+        // `getMemoryRoot()` honors $CLAUDE_FLOW_MEMORY_PATH, then the
+        // claude-flow.config.json `memory.persistPath`, then defaults to `.swarm`.
+        const cjsRequire = createRequire(import.meta.url);
+        const mod = cjsRequire('./memory-initializer.js');
+        if (typeof mod.getMemoryRoot === 'function') {
+            defaultDir = mod.getMemoryRoot();
+        }
+    }
+    catch {
+        /* memory-initializer not resolvable in this build — keep `.swarm/` default */
+    }
     if (!customPath)
-        return path.join(swarmDir, 'memory.db');
+        return path.join(defaultDir, 'memory.db');
     if (customPath === ':memory:')
         return ':memory:';
     const resolved = path.resolve(customPath);
-    // Ensure the path doesn't escape the working directory
+    // Ensure the path doesn't escape the working directory.
     const cwd = process.cwd();
     if (!resolved.startsWith(cwd)) {
-        return path.join(swarmDir, 'memory.db'); // fallback to safe default
+        return path.join(defaultDir, 'memory.db'); // fallback to safe default
     }
     return resolved;
 }
@@ -555,6 +579,17 @@ export async function bridgeStoreEntry(options) {
           embedding, embedding_dimensions, embedding_model,
           tags, metadata, created_at, updated_at, expires_at, status
         ) VALUES (?, ?, ?, ?, 'semantic', ?, ?, ?, ?, ?, ?, ?, ?, 'active')`;
+        // #1941: provision a `vector_indexes` row for this namespace before the
+        // entry insert. AgentDB's HNSW/router keys lookups by namespace via this
+        // table — if it has no row for e.g. `claude-memories`, `memory_search`
+        // returns 0 results even when memory_entries holds hundreds of rows for
+        // that namespace. INSERT OR IGNORE so existing index rows are preserved.
+        try {
+            ctx.db
+                .prepare(`INSERT OR IGNORE INTO vector_indexes (id, name, dimensions) VALUES (?, ?, ?)`)
+                .run(namespace, namespace, dimensions || 384);
+        }
+        catch { /* vector_indexes may not exist on legacy DBs — fall through */ }
         const stmt = ctx.db.prepare(insertSql);
         stmt.run(id, key, namespace, value, embeddingJson, dimensions || null, model, tags.length > 0 ? JSON.stringify(tags) : null, '{}', now, now, ttl ? now + (ttl * 1000) : null);
         // Phase 2: Write-through to TieredCache
@@ -1354,6 +1389,259 @@ export async function bridgeRecordCausalEdge(options) {
         return null;
     }
 }
+// ===== #1784: Delete tools for hierarchical + causal-graph =====
+/**
+ * Delete a hierarchical-memory entry by key (#1784).
+ *
+ * Reality check: agentdb's HierarchicalMemory class doesn't expose a public
+ * delete API today, so the real-backend path falls back to direct SQL on
+ * the underlying SQLite tables (status flip to 'deleted' + AttestationLog
+ * audit). The bridge-fallback path that bridgeHierarchicalStore uses when
+ * HierarchicalMemory isn't loaded writes plain memory_entries rows that
+ * `bridgeDeleteEntry` already handles.
+ *
+ * Returns { controller: 'native-unsupported' } when the real HM is loaded
+ * and the SQL fallback can't reach its private tables — surfacing the
+ * limitation honestly instead of silently returning success.
+ */
+export async function bridgeDeleteHierarchical(options) {
+    const registry = await getRegistry(options.dbPath);
+    if (!registry)
+        return null;
+    try {
+        const { key, tier } = options;
+        // MutationGuard validation
+        const guardResult = await guardValidate(registry, 'delete', { key, namespace: 'hierarchical' });
+        if (!guardResult.allowed) {
+            return { success: false, deleted: false, key, tier, controller: 'guard', error: `MutationGuard rejected: ${guardResult.reason}` };
+        }
+        const hm = registry.get('hierarchicalMemory');
+        // 1. agentdb@3.0.0-alpha.13+: ReflexionMemory.deleteEpisode propagates through
+        //    graph adapter / generic graph backend / vector backend AND purges SQL
+        //    episodes + episode_embeddings rows. Single call, durably consistent.
+        //    See agentic-flow#150/#151 (closes ruvnet/RuVector#427 the cli-visible way).
+        const reflexion = registry.get('reflexionMemory');
+        if (reflexion && typeof reflexion.deleteEpisode === 'function') {
+            try {
+                const removed = await reflexion.deleteEpisode(key);
+                if (removed) {
+                    await logAttestation(registry, 'delete', key, { namespace: 'hierarchical', tier });
+                    return { success: true, deleted: true, key, tier, controller: 'reflexionMemory', guarded: true };
+                }
+            }
+            catch { /* fall through */ }
+        }
+        // 2. Try HierarchicalMemory's own delete API if it ever ships one.
+        if (hm && typeof hm.delete === 'function') {
+            try {
+                await hm.delete(key);
+                await logAttestation(registry, 'delete', key, { namespace: 'hierarchical', tier });
+                return { success: true, deleted: true, key, tier, controller: 'hierarchicalMemory', guarded: true };
+            }
+            catch (err) {
+                // Fall through to SQL fallback
+            }
+        }
+        // 3. Stub HierarchicalMemory may expose `remove` or `forget`
+        if (hm && typeof hm.remove === 'function') {
+            try {
+                await hm.remove(key);
+                await logAttestation(registry, 'delete', key, { namespace: 'hierarchical', tier });
+                return { success: true, deleted: true, key, tier, controller: 'hierarchicalMemory-stub', guarded: true };
+            }
+            catch { /* fall through */ }
+        }
+        // 3. Bridge-fallback: HM stored to memory_entries with namespace prefix
+        //    (used when the real controller isn't loaded). Soft-delete via SQL.
+        const ctx = getDb(registry);
+        if (ctx) {
+            try {
+                const result = ctx.db.prepare(`
+          UPDATE memory_entries
+          SET status = 'deleted', updated_at = ?
+          WHERE key = ? AND namespace LIKE 'hierarchical%' AND status = 'active'
+        `).run(Date.now(), key);
+                const changes = result?.changes ?? 0;
+                if (changes > 0) {
+                    await logAttestation(registry, 'delete', key, { namespace: 'hierarchical', tier });
+                    return { success: true, deleted: true, key, tier, controller: 'bridge-fallback', guarded: true };
+                }
+                // Nothing to delete in SQL fallback — and no real-HM delete API.
+                // Surface the situation honestly.
+                return {
+                    success: false, deleted: false, key, tier,
+                    controller: hm ? 'native-unsupported' : 'not-found',
+                    error: hm
+                        ? 'HierarchicalMemory has no public delete API; entry remains in native storage'
+                        : 'No hierarchical entry found with this key',
+                };
+            }
+            catch (err) {
+                return { success: false, deleted: false, key, tier, controller: 'sql-error', error: err.message };
+            }
+        }
+        return null;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Delete a causal edge between two memory entries (#1784).
+ *
+ * The bridge stores fallback edges in namespace='causal-edges' with key
+ * '{sourceId}→{targetId}'. Those CAN be soft-deleted. The native graph-node
+ * backend has no delete API (createNode/createEdge/createHyperedge only),
+ * so an edge that landed in graph-node native storage stays there. We
+ * surface that explicitly via controller: 'native-unsupported'.
+ */
+export async function bridgeDeleteCausalEdge(options) {
+    const registry = await getRegistry(options.dbPath);
+    if (!registry)
+        return null;
+    try {
+        const { sourceId, targetId, relation } = options;
+        const edgeKey = `${sourceId}→${targetId}`;
+        const guardResult = await guardValidate(registry, 'delete', { key: edgeKey, namespace: 'causal-edges' });
+        if (!guardResult.allowed) {
+            return { success: false, deleted: false, sourceId, targetId, controller: 'guard', error: `MutationGuard rejected: ${guardResult.reason}` };
+        }
+        const causalGraph = registry.get('causalGraph');
+        // 1. agentdb@3.0.0-alpha.13+: GraphDatabaseAdapter.deleteEdgesByEndpoints
+        //    handles the (sourceId, targetId, relation?) tuple case directly via
+        //    Cypher MATCH … DETACH DELETE. Cypher-injection-safe (label validated
+        //    against /^[A-Za-z_][A-Za-z0-9_]*$/ upstream).
+        if (causalGraph && typeof causalGraph.deleteEdgesByEndpoints === 'function') {
+            try {
+                const r = await causalGraph.deleteEdgesByEndpoints(sourceId, targetId, relation);
+                const deletedCount = typeof r === 'object' && r ? (r.deleted ?? 0) : (r ? 1 : 0);
+                if (deletedCount > 0) {
+                    await logAttestation(registry, 'delete', edgeKey, { namespace: 'causal-edges', relation, count: deletedCount });
+                    return { success: true, deleted: true, sourceId, targetId, controller: 'causalGraph-cypher', guarded: true };
+                }
+            }
+            catch { /* fall through */ }
+        }
+        // 2. Pre-alpha.13 / different controller: try removeEdge() if exposed.
+        if (causalGraph && typeof causalGraph.removeEdge === 'function') {
+            try {
+                await causalGraph.removeEdge(sourceId, targetId, relation);
+                await logAttestation(registry, 'delete', edgeKey, { namespace: 'causal-edges', relation });
+                return { success: true, deleted: true, sourceId, targetId, controller: 'causalGraph', guarded: true };
+            }
+            catch { /* fall through */ }
+        }
+        // 2. Bridge-fallback: soft-delete the memory_entries row.
+        const ctx = getDb(registry);
+        if (ctx) {
+            try {
+                const result = ctx.db.prepare(`
+          UPDATE memory_entries
+          SET status = 'deleted', updated_at = ?
+          WHERE key = ? AND namespace = 'causal-edges' AND status = 'active'
+        `).run(Date.now(), edgeKey);
+                const changes = result?.changes ?? 0;
+                if (changes > 0) {
+                    await logAttestation(registry, 'delete', edgeKey, { namespace: 'causal-edges', relation });
+                    return { success: true, deleted: true, sourceId, targetId, controller: 'bridge-fallback', guarded: true };
+                }
+                return {
+                    success: false, deleted: false, sourceId, targetId,
+                    controller: 'native-unsupported',
+                    error: 'graph-node native backend has no delete API; edge cannot be removed from native storage. SQL fallback found no matching row.',
+                };
+            }
+            catch (err) {
+                return { success: false, deleted: false, sourceId, targetId, controller: 'sql-error', error: err.message };
+            }
+        }
+        return null;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Cascade-delete a causal node and all its incident edges (#1784).
+ *
+ * Same constraint as bridgeDeleteCausalEdge — native graph-node lacks a
+ * delete API. SQL fallback path soft-deletes the node (if stored as a
+ * memory_entries row) and every edge whose key contains the nodeId.
+ */
+export async function bridgeDeleteCausalNode(options) {
+    const registry = await getRegistry(options.dbPath);
+    if (!registry)
+        return null;
+    try {
+        const { nodeId } = options;
+        const guardResult = await guardValidate(registry, 'delete', { key: nodeId, namespace: 'causal-nodes' });
+        if (!guardResult.allowed) {
+            return { success: false, deletedNode: false, deletedEdges: 0, nodeId, controller: 'guard', error: `MutationGuard rejected: ${guardResult.reason}` };
+        }
+        // 1. agentdb@3.0.0-alpha.13+: GraphDatabaseAdapter.deleteNode(id, {cascade})
+        //    counts incident edges before delete so we get accurate audit numbers
+        //    regardless of binding stats. Cypher MATCH (n {id}) DETACH DELETE n.
+        const causalGraph = registry.get('causalGraph');
+        if (causalGraph && typeof causalGraph.deleteNode === 'function') {
+            try {
+                const r = await causalGraph.deleteNode(nodeId, { cascade: true });
+                if (r && typeof r === 'object') {
+                    const deletedNodeNative = !!r.deletedNode;
+                    const deletedEdgesNative = typeof r.deletedEdges === 'number' ? r.deletedEdges : 0;
+                    await logAttestation(registry, 'delete', nodeId, { namespace: 'causal-nodes', deletedEdges: deletedEdgesNative });
+                    return {
+                        success: true,
+                        deletedNode: deletedNodeNative,
+                        deletedEdges: deletedEdgesNative,
+                        nodeId,
+                        controller: 'causalGraph-cypher',
+                        guarded: true,
+                    };
+                }
+            }
+            catch { /* fall through to SQL */ }
+        }
+        // 2. SQL fallback: soft-delete the node row + every causal-edges row whose
+        //    key contains nodeId on either side. Used when agentdb pre-alpha.13 OR
+        //    when the entry was stored via the bridge's SQL fallback path.
+        const ctx = getDb(registry);
+        if (!ctx)
+            return null;
+        let deletedEdges = 0;
+        let deletedNode = false;
+        try {
+            const edgeResult = ctx.db.prepare(`
+        UPDATE memory_entries
+        SET status = 'deleted', updated_at = ?
+        WHERE namespace = 'causal-edges'
+          AND status = 'active'
+          AND (key LIKE ? OR key LIKE ?)
+      `).run(Date.now(), `${nodeId}→%`, `%→${nodeId}`);
+            deletedEdges = edgeResult?.changes ?? 0;
+            const nodeResult = ctx.db.prepare(`
+        UPDATE memory_entries
+        SET status = 'deleted', updated_at = ?
+        WHERE key = ? AND status = 'active'
+      `).run(Date.now(), nodeId);
+            deletedNode = (nodeResult?.changes ?? 0) > 0;
+            await logAttestation(registry, 'delete', nodeId, { namespace: 'causal-nodes', deletedEdges });
+        }
+        catch (err) {
+            return { success: false, deletedNode: false, deletedEdges: 0, nodeId, controller: 'sql-error', error: err.message };
+        }
+        return {
+            success: true,
+            deletedNode,
+            deletedEdges,
+            nodeId,
+            controller: 'bridge-fallback',
+            guarded: true,
+        };
+    }
+    catch {
+        return null;
+    }
+}
 // ===== Phase 5: ReflexionMemory session lifecycle =====
 /**
  * Start a session with ReflexionMemory episodic replay.