@claude-flow/cli 3.32.25 → 3.32.29

package/dist/src/mcp-tools/guidance-tools.d.ts

@@ -7,6 +7,8 @@
  * @module @claude-flow/cli/mcp-tools/guidance
  */
 import { type MCPTool } from './types.js';
+import { type CapabilityToolMetadata } from './capability-brain.js';
+export declare function configureGuidanceToolProvider(provider: () => readonly CapabilityToolMetadata[]): void;
 /**
  * All guidance tools
  */

package/dist/src/mcp-tools/guidance-tools.js

@@ -9,30 +9,41 @@
 import { getProjectCwd } from './types.js';
 import { validateIdentifier, validateText } from './validate-input.js';
 import { existsSync, readFileSync, readdirSync } from 'node:fs';
-import { join, dirname } from 'node:path';
+import { join, dirname, relative } from 'node:path';
 import { fileURLToPath } from 'node:url';
+import { buildCapabilityBrain, recommendCapabilities, } from './capability-brain.js';
 const __filename = fileURLToPath(import.meta.url);
 const __dirname = dirname(__filename);
-const CLI_ROOT = join(__dirname, '../../..');
 /**
  * Find the project root by looking for .claude/ directory.
  * Tries CWD first (most common), then walks up from the CLI package location.
  */
 function findProjectRoot() {
-    // Strategy 1: CWD (most reliable when invoked by user)
-    if (existsSync(join(getProjectCwd(), '.claude'))) {
-        return getProjectCwd();
+    const cwd = getProjectCwd();
+    let cwdIsCliPackage = false;
+    const cwdManifest = join(cwd, 'package.json');
+    if (existsSync(cwdManifest)) {
+        try {
+            const manifest = JSON.parse(readFileSync(cwdManifest, 'utf-8'));
+            cwdIsCliPackage = manifest.name === '@claude-flow/cli';
+        }
+        catch {
+            // An invalid project manifest is not a reason to hide discoverable files.
+        }
     }
-    // Strategy 2: Walk up from CLI package location
-    // CLI is at v3/@claude-flow/cli/ — project root is 4 levels up
-    const fromPackage = join(CLI_ROOT, '../../../..');
-    if (existsSync(join(fromPackage, '.claude'))) {
-        return fromPackage;
+    // User projects with a local .claude directory remain the primary root.
+    // Exclude the CLI package's own shipped .claude assets during repository
+    // development; otherwise ecosystem discovery silently stops at the package.
+    if (!cwdIsCliPackage && existsSync(join(cwd, '.claude'))) {
+        return cwd;
     }
-    // Strategy 3: Walk up from CWD
-    let dir = getProjectCwd();
+    // Walk up to a Git/workspace root. Worktrees use a .git file, so existsSync
+    // is intentionally used instead of requiring a directory.
+    let dir = cwd;
     for (let i = 0; i < 10; i++) {
-        if (existsSync(join(dir, '.claude')))
+        if (existsSync(join(dir, '.git')))
+            return dir;
+        if (!(cwdIsCliPackage && dir === cwd) && existsSync(join(dir, '.claude')))
             return dir;
         const parent = dirname(dir);
         if (parent === dir)
@@ -40,9 +51,20 @@ function findProjectRoot() {
         dir = parent;
     }
     // Fallback: CWD
-    return getProjectCwd();
+    return cwd;
 }
 const PROJECT_ROOT = findProjectRoot();
+/**
+ * Injected by mcp-client after every MCP tool has been registered. Keeping the
+ * provider here avoids guidance importing the registry and creating a cycle.
+ */
+let liveToolProvider = () => [];
+export function configureGuidanceToolProvider(provider) {
+    liveToolProvider = provider;
+}
+function getCapabilityBrain() {
+    return buildCapabilityBrain(liveToolProvider());
+}
 const CAPABILITY_CATALOG = {
     'agent-management': {
         name: 'Agent Management',
@@ -285,9 +307,6 @@ const WORKFLOW_TEMPLATES = {
 };
 // ── Dynamic Discovery ───────────────────────────────────────
 function discoverAgents() {
-    const agentsDir = join(PROJECT_ROOT, '.claude/agents');
-    if (!existsSync(agentsDir))
-        return [];
     const agents = [];
     function walk(dir) {
         try {
@@ -306,27 +325,125 @@ function discoverAgents() {
         }
         catch { /* ignore */ }
     }
-    walk(agentsDir);
+    const roots = [
+        join(PROJECT_ROOT, '.claude/agents'),
+        join(PROJECT_ROOT, '.agents/agents'),
+    ];
+    const pluginsDir = join(PROJECT_ROOT, 'plugins');
+    if (existsSync(pluginsDir)) {
+        for (const entry of readdirSync(pluginsDir, { withFileTypes: true })) {
+            if (entry.isDirectory())
+                roots.push(join(pluginsDir, entry.name, 'agents'));
+        }
+    }
+    for (const root of roots) {
+        if (existsSync(root))
+            walk(root);
+    }
     return [...new Set(agents)].sort();
 }
 function discoverSkills() {
-    const skillsDir = join(PROJECT_ROOT, '.claude/skills');
-    if (!existsSync(skillsDir))
-        return [];
     const skills = [];
-    try {
-        const entries = readdirSync(skillsDir, { withFileTypes: true });
-        for (const entry of entries) {
-            if (entry.isDirectory()) {
-                const skillFile = join(skillsDir, entry.name, 'SKILL.md');
-                if (existsSync(skillFile)) {
-                    skills.push(entry.name);
+    function walk(dir) {
+        try {
+            for (const entry of readdirSync(dir, { withFileTypes: true })) {
+                const target = join(dir, entry.name);
+                if (entry.isDirectory()) {
+                    walk(target);
+                }
+                else if (entry.name === 'SKILL.md') {
+                    const content = readFileSync(target, 'utf-8');
+                    const nameMatch = content.match(/^name:\s*(.+)$/m);
+                    skills.push(nameMatch
+                        ? nameMatch[1].trim().replace(/^["']|["']$/g, '')
+                        : relative(PROJECT_ROOT, dirname(target)));
                 }
             }
         }
+        catch {
+            // Missing or unreadable optional capability roots are reported by absence.
+        }
+    }
+    const roots = [
+        join(PROJECT_ROOT, '.claude/skills'),
+        join(PROJECT_ROOT, '.agents/skills'),
+    ];
+    const pluginsDir = join(PROJECT_ROOT, 'plugins');
+    if (existsSync(pluginsDir)) {
+        for (const entry of readdirSync(pluginsDir, { withFileTypes: true })) {
+            if (entry.isDirectory())
+                roots.push(join(pluginsDir, entry.name, 'skills'));
+        }
+    }
+    for (const root of roots) {
+        if (existsSync(root))
+            walk(root);
     }
-    catch { /* ignore */ }
-    return skills.sort();
+    return [...new Set(skills)].sort();
+}
+function discoverPlugins() {
+    const pluginsDir = join(PROJECT_ROOT, 'plugins');
+    if (!existsSync(pluginsDir))
+        return [];
+    const plugins = [];
+    for (const entry of readdirSync(pluginsDir, { withFileTypes: true })) {
+        if (!entry.isDirectory())
+            continue;
+        const manifestPath = join(pluginsDir, entry.name, '.claude-plugin', 'plugin.json');
+        if (!existsSync(manifestPath))
+            continue;
+        try {
+            const manifest = JSON.parse(readFileSync(manifestPath, 'utf-8'));
+            plugins.push({
+                id: entry.name,
+                name: manifest.name ?? entry.name,
+                version: manifest.version ?? 'unknown',
+                description: manifest.description ?? '',
+                manifest: relative(PROJECT_ROOT, manifestPath),
+            });
+        }
+        catch {
+            plugins.push({
+                id: entry.name,
+                name: entry.name,
+                version: 'unknown',
+                manifest: relative(PROJECT_ROOT, manifestPath),
+                invalidManifest: true,
+            });
+        }
+    }
+    return plugins.sort((left, right) => String(left.id).localeCompare(String(right.id), 'en-US'));
+}
+function discoverPackages() {
+    const packagesDir = join(PROJECT_ROOT, 'v3', '@claude-flow');
+    if (!existsSync(packagesDir))
+        return [];
+    const packages = [];
+    for (const entry of readdirSync(packagesDir, { withFileTypes: true })) {
+        if (!entry.isDirectory())
+            continue;
+        const manifestPath = join(packagesDir, entry.name, 'package.json');
+        if (!existsSync(manifestPath))
+            continue;
+        try {
+            const manifest = JSON.parse(readFileSync(manifestPath, 'utf-8'));
+            packages.push({
+                name: manifest.name ?? entry.name,
+                version: manifest.version ?? 'unknown',
+                description: manifest.description ?? '',
+                manifest: relative(PROJECT_ROOT, manifestPath),
+            });
+        }
+        catch {
+            packages.push({
+                name: entry.name,
+                version: 'unknown',
+                manifest: relative(PROJECT_ROOT, manifestPath),
+                invalidManifest: true,
+            });
+        }
+    }
+    return packages.sort((left, right) => String(left.name).localeCompare(String(right.name), 'en-US'));
 }
 // ── MCP Tool Definitions ────────────────────────────────────
 const guidanceCapabilities = {
@@ -349,6 +466,7 @@ const guidanceCapabilities = {
     handler: async (params) => {
         const area = params.area;
         const format = params.format || 'summary';
+        const brain = getCapabilityBrain();
         if (area) {
             const v = validateIdentifier(area, 'area');
             if (!v.valid)
@@ -356,14 +474,42 @@ const guidanceCapabilities = {
         }
         if (area) {
             const cap = CAPABILITY_CATALOG[area];
-            if (!cap) {
-                const available = Object.keys(CAPABILITY_CATALOG).join(', ');
+            const brainDomain = brain.domains.find((domain) => domain.id === area);
+            if (!cap && !brainDomain) {
+                const available = [
+                    ...Object.keys(CAPABILITY_CATALOG),
+                    ...brain.domains.map((domain) => domain.id),
+                ].filter((value, index, all) => all.indexOf(value) === index).join(', ');
                 return { content: [{ type: 'text', text: JSON.stringify({ error: `Unknown area: ${area}`, available }, null, 2) }], isError: true };
             }
-            return { content: [{ type: 'text', text: JSON.stringify(cap, null, 2) }] };
+            return {
+                content: [{
+                        type: 'text',
+                        text: JSON.stringify({
+                            ...(cap ?? {}),
+                            legacyCatalogStatus: cap ? 'compatibility-only; tool names may be deprecated aliases' : undefined,
+                            legacyToolResolution: cap ? cap.tools.map((name) => ({
+                                name,
+                                registered: brain.domains.some((entry) => entry.tools.some((tool) => tool.name === name)),
+                            })) : undefined,
+                            capabilityBrain: brainDomain,
+                        }, null, 2),
+                    }],
+            };
         }
         if (format === 'detailed') {
-            return { content: [{ type: 'text', text: JSON.stringify(CAPABILITY_CATALOG, null, 2) }] };
+            return {
+                content: [{
+                        type: 'text',
+                        text: JSON.stringify({
+                            legacyCatalog: {
+                                status: 'compatibility-only; use capabilityBrain for live routing',
+                                areas: CAPABILITY_CATALOG,
+                            },
+                            capabilityBrain: brain,
+                        }, null, 2),
+                    }],
+            };
         }
         const summary = Object.entries(CAPABILITY_CATALOG).map(([key, val]) => ({
             area: key,
@@ -374,7 +520,30 @@ const guidanceCapabilities = {
             skillCount: val.skills.length,
             whenToUse: val.whenToUse,
         }));
-        return { content: [{ type: 'text', text: JSON.stringify({ areas: summary, totalAreas: summary.length }, null, 2) }] };
+        return {
+            content: [{
+                    type: 'text',
+                    text: JSON.stringify({
+                        areas: summary,
+                        totalAreas: summary.length,
+                        live: {
+                            schemaVersion: brain.schemaVersion,
+                            registeredToolCount: brain.coverage.registeredToolCount,
+                            classifiedToolCount: brain.coverage.classifiedToolCount,
+                            coveragePercent: brain.coverage.coveragePercent,
+                            fallbackClassifiedTools: brain.coverage.fallbackClassifiedTools,
+                            domains: brain.domains.map((domain) => ({
+                                id: domain.id,
+                                name: domain.name,
+                                registeredToolCount: domain.tools.length,
+                                health: domain.health,
+                                authority: domain.authority,
+                                risk: domain.risk,
+                            })),
+                        },
+                    }, null, 2),
+                }],
+        };
     },
 };
 const guidanceRecommend = {
@@ -397,6 +566,8 @@ const guidanceRecommend = {
             if (!v.valid)
                 return { content: [{ type: 'text', text: JSON.stringify({ error: v.error }, null, 2) }], isError: true };
         }
+        const brain = getCapabilityBrain();
+        const capabilityRecommendation = recommendCapabilities(brain, task);
         const matches = [];
         for (const route of TASK_ROUTES) {
             if (route.pattern.test(task)) {
@@ -430,12 +601,14 @@ const guidanceRecommend = {
                                 { area: 'hooks-automation', reason: 'Use hooks for task routing and learning' },
                             ],
                             tip: 'Use guidance_capabilities for a full list of all capability areas.',
+                            capabilityBrain: capabilityRecommendation,
                         }, null, 2),
                     }],
             };
         }
         const primaryWorkflow = recommendations[0]?.workflow;
         const template = primaryWorkflow ? WORKFLOW_TEMPLATES[primaryWorkflow] : undefined;
+        const liveToolNames = new Set(brain.domains.flatMap((domain) => domain.tools.map((tool) => tool.name)));
         return {
             content: [{
                     type: 'text',
@@ -445,7 +618,8 @@ const guidanceRecommend = {
                             area: r.area,
                             name: r.capability.name,
                             description: r.capability.description,
-                            tools: r.capability.tools,
+                            tools: r.capability.tools.filter((name) => liveToolNames.has(name)),
+                            unregisteredLegacyToolRefs: r.capability.tools.filter((name) => !liveToolNames.has(name)),
                             agents: r.capability.agents,
                             skills: r.capability.skills,
                         })),
@@ -455,6 +629,7 @@ const guidanceRecommend = {
                             agents: template.agents,
                             topology: template.topology,
                         } : undefined,
+                        capabilityBrain: capabilityRecommendation,
                     }, null, 2),
                 }],
         };
@@ -468,7 +643,7 @@ const guidanceDiscover = {
         properties: {
             type: {
                 type: 'string',
-                enum: ['agents', 'skills', 'all'],
+                enum: ['agents', 'skills', 'plugins', 'packages', 'all'],
                 description: 'What to discover. Default: all.',
             },
         },
@@ -484,6 +659,18 @@ const guidanceDiscover = {
             const skills = discoverSkills();
             result.skills = { count: skills.length, names: skills };
         }
+        if (type === 'plugins' || type === 'all') {
+            const plugins = discoverPlugins();
+            result.plugins = { count: plugins.length, entries: plugins };
+        }
+        if (type === 'packages' || type === 'all') {
+            const packages = discoverPackages();
+            result.packages = { count: packages.length, entries: packages };
+        }
+        result.capabilityBrain = {
+            registeredTools: getCapabilityBrain().coverage.registeredToolCount,
+            note: 'Filesystem discovery reports installed artifacts; it does not prove configuration, health, or authorization.',
+        };
         return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
     },
 };
@@ -625,10 +812,155 @@ const guidanceQuickRef = {
         return { content: [{ type: 'text', text: JSON.stringify(ref, null, 2) }] };
     },
 };
+const guidanceBrain = {
+    name: 'guidance_brain',
+    description: 'Query Ruflo’s live capability brain. Covers every registered MCP tool, separates registration from configuration/reachability/health/authorization, recommends capabilities for a task, and returns the validated implementation loop.',
+    inputSchema: {
+        type: 'object',
+        properties: {
+            mode: {
+                type: 'string',
+                enum: ['overview', 'capabilities', 'coverage', 'ecosystem', 'recommend', 'implementation-loop'],
+                description: 'Brain view. Default: overview.',
+            },
+            task: {
+                type: 'string',
+                description: 'Required for recommend mode.',
+            },
+            domain: {
+                type: 'string',
+                description: 'Optional capability domain filter for capabilities mode.',
+            },
+        },
+    },
+    handler: async (params) => {
+        const mode = params.mode ?? 'overview';
+        const task = params.task;
+        const domain = params.domain;
+        const brain = getCapabilityBrain();
+        if (domain) {
+            const validation = validateIdentifier(domain, 'domain');
+            if (!validation.valid) {
+                return {
+                    content: [{ type: 'text', text: JSON.stringify({ error: validation.error }, null, 2) }],
+                    isError: true,
+                };
+            }
+        }
+        let result;
+        switch (mode) {
+            case 'overview':
+                result = {
+                    schemaVersion: brain.schemaVersion,
+                    generatedAt: brain.generatedAt,
+                    truthModel: brain.truthModel,
+                    coverage: brain.coverage,
+                    domainCount: brain.domains.length,
+                    cliCommandCount: brain.cliCommands.length,
+                    cliCommands: brain.cliCommands,
+                    registeredDomains: brain.domains
+                        .filter((entry) => entry.health.registered)
+                        .map((entry) => ({
+                        id: entry.id,
+                        name: entry.name,
+                        toolCount: entry.tools.length,
+                        maturity: entry.maturity,
+                        authority: entry.authority,
+                        risk: entry.risk,
+                        health: entry.health,
+                    })),
+                    implementationLoop: brain.implementationLoop.map((step) => step.id),
+                };
+                break;
+            case 'capabilities': {
+                const capabilities = domain
+                    ? brain.domains.filter((entry) => entry.id === domain)
+                    : brain.domains;
+                if (domain && capabilities.length === 0) {
+                    return {
+                        content: [{
+                                type: 'text',
+                                text: JSON.stringify({
+                                    error: `Unknown capability domain: ${domain}`,
+                                    available: brain.domains.map((entry) => entry.id),
+                                }, null, 2),
+                            }],
+                        isError: true,
+                    };
+                }
+                result = { schemaVersion: brain.schemaVersion, truthModel: brain.truthModel, capabilities };
+                break;
+            }
+            case 'coverage':
+                result = {
+                    schemaVersion: brain.schemaVersion,
+                    coverage: brain.coverage,
+                    assignments: brain.domains.map((entry) => ({
+                        domain: entry.id,
+                        tools: entry.tools.map((tool) => tool.name),
+                    })),
+                };
+                break;
+            case 'ecosystem': {
+                const agents = discoverAgents();
+                const skills = discoverSkills();
+                const plugins = discoverPlugins();
+                const packages = discoverPackages();
+                result = {
+                    schemaVersion: brain.schemaVersion,
+                    agents: { count: agents.length, names: agents },
+                    skills: { count: skills.length, names: skills },
+                    plugins: { count: plugins.length, entries: plugins },
+                    packages: { count: packages.length, entries: packages },
+                    cliCommands: { count: brain.cliCommands.length, names: brain.cliCommands },
+                    availabilityNote: 'Installed or catalogued artifacts are not necessarily configured, reachable, healthy, or authorized.',
+                };
+                break;
+            }
+            case 'recommend': {
+                const validation = validateText(task, 'task');
+                if (!validation.valid) {
+                    return {
+                        content: [{ type: 'text', text: JSON.stringify({ error: validation.error }, null, 2) }],
+                        isError: true,
+                    };
+                }
+                result = recommendCapabilities(brain, task);
+                break;
+            }
+            case 'implementation-loop':
+                result = {
+                    schemaVersion: brain.schemaVersion,
+                    steps: brain.implementationLoop,
+                    invariants: [
+                        'Recall precedes implementation.',
+                        'Testing and validation precede optimization.',
+                        'Benchmarks compare a source-bound candidate with a source-bound baseline.',
+                        'Learning and optimization cannot authorize promotion.',
+                        'Publishing requires separate authorization and immutable artifact evidence.',
+                    ],
+                };
+                break;
+            default:
+                return {
+                    content: [{
+                            type: 'text',
+                            text: JSON.stringify({
+                                error: `Unknown mode: ${mode}`,
+                                available: ['overview', 'capabilities', 'coverage', 'ecosystem', 'recommend', 'implementation-loop'],
+                            }, null, 2),
+                        }],
+                    isError: true,
+                };
+        }
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    },
+};
 /**
  * All guidance tools
  */
 export const guidanceTools = [
+    guidanceBrain,
     guidanceCapabilities,
     guidanceRecommend,
     guidanceDiscover,

package/dist/src/mcp-tools/index.d.ts

@@ -20,9 +20,12 @@ export { transferTools } from './transfer-tools.js';
 export { securityTools } from './security-tools.js';
 export { embeddingsTools } from './embeddings-tools.js';
 export { claimsTools } from './claims-tools.js';
+export { policyTools } from './policy-tools.js';
 export { wasmAgentTools } from './wasm-agent-tools.js';
 export { ruvllmWasmTools } from './ruvllm-tools.js';
-export { guidanceTools } from './guidance-tools.js';
+export { configureGuidanceToolProvider, guidanceTools, } from './guidance-tools.js';
+export { buildCapabilityBrain, CAPABILITY_DOMAINS, classifyCapabilityTool, IMPLEMENTATION_LOOP, recommendCapabilities, RUFLO_CLI_COMMANDS, } from './capability-brain.js';
+export type { AvailabilityState, CapabilityAuthority, CapabilityBrain, CapabilityDomain, CapabilityDomainDefinition, CapabilityHealth, CapabilityMaturity, CapabilityRecommendation, CapabilityRisk, CapabilityToolMetadata, ImplementationLoopStep, } from './capability-brain.js';
 export { autopilotTools } from './autopilot-tools.js';
 export { metaharnessTools } from './metaharness-tools.js';
 export { testgenTools } from './testgen-tools.js';

package/dist/src/mcp-tools/index.js

@@ -19,9 +19,11 @@ export { transferTools } from './transfer-tools.js';
 export { securityTools } from './security-tools.js';
 export { embeddingsTools } from './embeddings-tools.js';
 export { claimsTools } from './claims-tools.js';
+export { policyTools } from './policy-tools.js';
 export { wasmAgentTools } from './wasm-agent-tools.js';
 export { ruvllmWasmTools } from './ruvllm-tools.js';
-export { guidanceTools } from './guidance-tools.js';
+export { configureGuidanceToolProvider, guidanceTools, } from './guidance-tools.js';
+export { buildCapabilityBrain, CAPABILITY_DOMAINS, classifyCapabilityTool, IMPLEMENTATION_LOOP, recommendCapabilities, RUFLO_CLI_COMMANDS, } from './capability-brain.js';
 export { autopilotTools } from './autopilot-tools.js';
 // ADR-150 — MetaHarness MCP tools (score / genome / mcp-scan / threat-model / oia-audit)
 export { metaharnessTools } from './metaharness-tools.js';