@claude-flow/cli 3.21.1 → 3.23.0

package/scripts/run-beir-bge.mjs

@@ -1,324 +0,0 @@
-#!/usr/bin/env node
-// run-beir-bge.mjs — NFCorpus retrieval using real BGE-base-en-v1.5
-// embeddings (bypasses neural-tools' broken agentic-flow path that hash-fell-
-// back on darwin-arm64 without sharp/libvips).
-//
-// Stores doc embeddings in a single .f32 binary file (3633 * 768 * 4 = ~11MB)
-// for fast bench iteration without re-embedding.
-//
-// Usage:
-//   cd /tmp/beir-nfcorpus
-//   node /path/to/scripts/run-beir-bge.mjs                          # full ingest + bench
-//   SKIP_INGEST=1 node /path/to/scripts/run-beir-bge.mjs            # reuse cached embeds
-//   BGE_MODEL=Xenova/bge-small-en-v1.5 node ...                     # faster, lower-quality
-//   BGE_MODEL=Xenova/bge-large-en-v1.5 node ...                     # slower, higher-quality
-//
-// ADR-086.
-
-import { readFileSync, writeFileSync, existsSync, mkdirSync } from 'node:fs';
-import { fileURLToPath } from 'node:url';
-import { dirname, join, resolve } from 'node:path';
-import { performance } from 'node:perf_hooks';
-
-const SCRIPT_DIR = dirname(fileURLToPath(import.meta.url));
-const CLI_ROOT = resolve(SCRIPT_DIR, '..');
-const RUFLO_ROOT = resolve(SCRIPT_DIR, '../../../..');
-const RUNS_DIR = join(RUFLO_ROOT, 'docs', 'benchmarks', 'runs');
-
-const DATA_DIR = process.env.BEIR_DATA_DIR || '/tmp/beir-nfcorpus/nfcorpus';
-// BUG-FIX (ADR-087): CACHE_DIR was hardcoded to /tmp/beir-nfcorpus/bge-cache,
-// which made the SciFact run silently overwrite the NFCorpus cache. Now
-// derived from DATA_DIR — each dataset gets its own cache directory.
-const CACHE_DIR = join(dirname(DATA_DIR), 'bge-cache');
-const BGE_MODEL = process.env.BGE_MODEL || 'Xenova/bge-base-en-v1.5';
-const SKIP_INGEST = process.env.SKIP_INGEST === '1';
-const MAX_QUERIES = Number(process.env.MAX_QUERIES) || 0;
-
-// Published BEIR baselines per dataset (nDCG@10).
-// Sources: Thakur et al. 2021 (BEIR paper), BGE paper (BAAI 2024),
-// SPLADE++ paper, papers-with-code BEIR leaderboards.
-const BASELINES_BY_DATASET = {
-  nfcorpus: {
-    'BM25 (Lucene)':        0.325,
-    'DocT5query':           0.328,
-    'TAS-B':                0.319,
-    'GenQ':                 0.319,
-    'ColBERT':              0.305,
-    'Contriever':           0.328,
-    'GTR-XL':               0.343,
-    'SPLADE++':             0.347,
-    'BGE-large-v1.5 (pub)': 0.380,
-    'SBERT msmarco':        0.272,
-  },
-  scifact: {
-    'BM25 (Lucene)':        0.679,
-    'DocT5query':           0.675,
-    'TAS-B':                0.643,
-    'GenQ':                 0.644,
-    'ColBERT':              0.671,
-    'Contriever':           0.677,
-    'GTR-XL':               0.662,
-    'SPLADE++':             0.704,
-    'BGE-large-v1.5 (pub)': 0.722,
-    'SBERT msmarco':        0.555,
-  },
-  arguana: {
-    'BM25 (Lucene)':        0.397,
-    'DocT5query':           0.349,
-    'TAS-B':                0.429,
-    'GenQ':                 0.493,
-    'ColBERT':              0.233,
-    'Contriever':           0.379,
-    'GTR-XL':               0.439,
-    'SPLADE++':             0.521,
-    'BGE-large-v1.5 (pub)': 0.636,
-    'SBERT msmarco':        0.371,
-  },
-  scidocs: {
-    'BM25 (Lucene)':        0.158,
-    'DocT5query':           0.162,
-    'TAS-B':                0.149,
-    'GenQ':                 0.143,
-    'ColBERT':              0.145,
-    'Contriever':           0.165,
-    'GTR-XL':               0.174,
-    'SPLADE++':             0.159,
-    'BGE-large-v1.5 (pub)': 0.225,
-    'SBERT msmarco':        0.122,
-  },
-};
-
-// Auto-detect dataset from DATA_DIR path; default to nfcorpus baselines.
-function detectDataset(path) {
-  const p = path.toLowerCase();
-  for (const ds of Object.keys(BASELINES_BY_DATASET)) {
-    if (p.includes(ds)) return ds;
-  }
-  return 'nfcorpus';
-}
-
-// ---------------------------------------------------------------------------
-// nDCG (graded)
-// ---------------------------------------------------------------------------
-
-function dcg(rels, k) {
-  let s = 0;
-  for (let i = 0; i < Math.min(rels.length, k); i++) {
-    s += (Math.pow(2, rels[i]) - 1) / Math.log2(i + 2);
-  }
-  return s;
-}
-function ndcg(retrieved, qrels, k) {
-  const rels = retrieved.slice(0, k).map((id) => qrels.get(id) ?? 0);
-  const ideal = [...qrels.values()].sort((a, b) => b - a).slice(0, k);
-  const idcg = dcg(ideal, k);
-  return idcg > 0 ? dcg(rels, k) / idcg : 0;
-}
-function mrr(retrieved, qrels, k) {
-  for (let i = 0; i < Math.min(retrieved.length, k); i++) {
-    if ((qrels.get(retrieved[i]) ?? 0) > 0) return 1 / (i + 1);
-  }
-  return 0;
-}
-function recall(retrieved, qrels, k) {
-  const tot = [...qrels.values()].filter((v) => v > 0).length;
-  if (tot === 0) return 0;
-  let h = 0;
-  for (let i = 0; i < Math.min(retrieved.length, k); i++) {
-    if ((qrels.get(retrieved[i]) ?? 0) > 0) h++;
-  }
-  return h / tot;
-}
-
-function cosine(a, b) {
-  let s = 0;
-  for (let i = 0; i < a.length; i++) s += a[i] * b[i];
-  return s; // already L2-normalised in BGE
-}
-
-// ---------------------------------------------------------------------------
-// Loaders
-// ---------------------------------------------------------------------------
-
-function loadJsonl(path) {
-  return readFileSync(path, 'utf-8').split('\n').filter(Boolean).map((l) => JSON.parse(l));
-}
-function loadQrels(path) {
-  const qrels = new Map();
-  const lines = readFileSync(path, 'utf-8').split('\n');
-  for (let i = 1; i < lines.length; i++) {
-    if (!lines[i].trim()) continue;
-    const [qid, did, score] = lines[i].split('\t');
-    if (!qrels.has(qid)) qrels.set(qid, new Map());
-    qrels.get(qid).set(did, Number(score));
-  }
-  return qrels;
-}
-
-// ---------------------------------------------------------------------------
-// Embedding cache I/O — single .f32 file + .ids file
-// ---------------------------------------------------------------------------
-
-function cachePath(suffix) {
-  const safe = BGE_MODEL.replace(/\//g, '_');
-  return join(CACHE_DIR, `${safe}.${suffix}`);
-}
-
-function saveEmbeddings(ids, embeddings, dim) {
-  mkdirSync(CACHE_DIR, { recursive: true });
-  // ids: one per line
-  writeFileSync(cachePath('ids'), ids.join('\n') + '\n');
-  // embeddings: concatenated Float32Array
-  const buf = new Float32Array(ids.length * dim);
-  for (let i = 0; i < ids.length; i++) buf.set(embeddings[i], i * dim);
-  writeFileSync(cachePath('f32'), Buffer.from(buf.buffer));
-}
-
-function loadEmbeddings(dim) {
-  if (!existsSync(cachePath('ids')) || !existsSync(cachePath('f32'))) return null;
-  const ids = readFileSync(cachePath('ids'), 'utf-8').split('\n').filter(Boolean);
-  const raw = readFileSync(cachePath('f32'));
-  const buf = new Float32Array(raw.buffer, raw.byteOffset, raw.length / 4);
-  const embeds = [];
-  for (let i = 0; i < ids.length; i++) embeds.push(buf.slice(i * dim, (i + 1) * dim));
-  return { ids, embeds };
-}
-
-// ---------------------------------------------------------------------------
-// Main
-// ---------------------------------------------------------------------------
-
-async function main() {
-  const dataset = detectDataset(DATA_DIR);
-  const BASELINES_NDCG10 = BASELINES_BY_DATASET[dataset];
-  console.log(`# BEIR ${dataset} — BGE embedder (ADR-085/086)`);
-  console.log(`Model: ${BGE_MODEL}`);
-  console.log(`Data:  ${DATA_DIR}`);
-
-  const corpus = loadJsonl(join(DATA_DIR, 'corpus.jsonl'));
-  const queries = loadJsonl(join(DATA_DIR, 'queries.jsonl'));
-  const qrels = loadQrels(join(DATA_DIR, 'qrels/test.tsv'));
-  console.log(`Corpus: ${corpus.length} docs · Queries: ${queries.length} · Test qrels: ${qrels.size}`);
-
-  const bge = await import(join(CLI_ROOT, 'dist/src/memory/bge-embedder.js'));
-  const emb = await bge.getBgeEmbedder(BGE_MODEL);
-  if (!emb) {
-    console.error('BGE failed to load:', bge.getBgeStatus());
-    process.exit(1);
-  }
-  const dim = emb.dim();
-  console.log(`BGE loaded (dim=${dim})`);
-
-  // Ingest or load cached doc embeddings.
-  let docIds, docEmbeds;
-  const cached = SKIP_INGEST ? loadEmbeddings(dim) : null;
-  if (cached) {
-    docIds = cached.ids;
-    docEmbeds = cached.embeds;
-    console.log(`Loaded ${docIds.length} cached doc embeddings from ${cachePath('f32')}`);
-  } else {
-    console.log(`\nEmbedding ${corpus.length} docs (this is the slow step, ~20 min on M-series CPU)...`);
-    docIds = corpus.map((d) => d._id);
-    docEmbeds = new Array(corpus.length);
-    const tIngest = performance.now();
-    for (let i = 0; i < corpus.length; i++) {
-      const d = corpus[i];
-      const text = `${d.title || ''}\n${d.text || ''}`.slice(0, 4096);
-      docEmbeds[i] = await emb.embed(text);
-      if ((i + 1) % 100 === 0) {
-        const elapsed = (performance.now() - tIngest) / 1000;
-        const rate = (i + 1) / elapsed;
-        const eta = (corpus.length - i - 1) / rate;
-        console.log(`  ${i + 1}/${corpus.length}  ${rate.toFixed(1)} docs/s  ETA ${eta.toFixed(0)}s`);
-      }
-    }
-    console.log(`Embedded ${corpus.length} docs in ${((performance.now() - tIngest) / 1000).toFixed(0)}s`);
-    saveEmbeddings(docIds, docEmbeds, dim);
-    console.log(`Cached to ${cachePath('f32')}`);
-  }
-
-  // Run retrieval per query.
-  const queriesById = new Map(queries.map((q) => [q._id, q.text]));
-  const evalQueryIds = MAX_QUERIES
-    ? [...qrels.keys()].slice(0, MAX_QUERIES)
-    : [...qrels.keys()];
-
-  // ADR-090: BGE_QUERY_PREFIX=1 enables BAAI's recommended query prefix.
-  const USE_QUERY_PREFIX = process.env.BGE_QUERY_PREFIX === '1';
-  console.log(`\nRunning ${evalQueryIds.length} queries${USE_QUERY_PREFIX ? ' (with BGE query prefix, ADR-090)' : ''}...`);
-  let nSum = 0, mSum = 0, r10Sum = 0, r100Sum = 0, n = 0;
-  // ADR-086 — save per-query metrics for paired bootstrap significance testing.
-  const perQuery = [];
-  const tQ = performance.now();
-  for (const qid of evalQueryIds) {
-    const qtext = queriesById.get(qid);
-    if (!qtext) continue;
-    // ADR-090: opt-in BGE query prefix per BAAI's docs (+0.009 nDCG@10 on
-    // NFCorpus dense-alone). Falls back to plain embed() if not enabled.
-    const qEmb = USE_QUERY_PREFIX && emb.embedQuery ? await emb.embedQuery(qtext) : await emb.embed(qtext);
-    const scores = new Array(docEmbeds.length);
-    for (let i = 0; i < docEmbeds.length; i++) scores[i] = { id: docIds[i], score: cosine(qEmb, docEmbeds[i]) };
-    scores.sort((a, b) => b.score - a.score);
-    const top100 = scores.slice(0, 100).map((s) => s.id);
-
-    const qmap = qrels.get(qid);
-    const qNdcg = ndcg(top100, qmap, 10);
-    const qMrr = mrr(top100, qmap, 10);
-    const qR10 = recall(top100, qmap, 10);
-    const qR100 = recall(top100, qmap, 100);
-    nSum += qNdcg; mSum += qMrr; r10Sum += qR10; r100Sum += qR100; n++;
-    perQuery.push({ qid, ndcg10: qNdcg, mrr10: qMrr, recall10: qR10, recall100: qR100 });
-    if (n % 50 === 0) {
-      const elapsed = (performance.now() - tQ) / 1000;
-      console.log(`  ${n}/${evalQueryIds.length} in ${elapsed.toFixed(0)}s  running nDCG@10=${(nSum / n).toFixed(4)}`);
-    }
-  }
-  const queryMs = performance.now() - tQ;
-
-  const ndcg10 = nSum / n;
-  const mrr10 = mSum / n;
-  const recall10 = r10Sum / n;
-  const recall100 = r100Sum / n;
-
-  console.log(`\n=== Results (N=${n}, BGE-base-en-v1.5) ===`);
-  console.log(`  nDCG@10:    ${ndcg10.toFixed(4)}`);
-  console.log(`  MRR@10:     ${mrr10.toFixed(4)}`);
-  console.log(`  Recall@10:  ${recall10.toFixed(4)}`);
-  console.log(`  Recall@100: ${recall100.toFixed(4)}`);
-  console.log(`  Avg query latency: ${(queryMs / n).toFixed(0)}ms`);
-
-  console.log(`\n=== vs published NFCorpus baselines (nDCG@10) ===`);
-  const ourLabel = `ruflo + ${BGE_MODEL.replace('Xenova/', '')}`;
-  const ranking = [
-    ...Object.entries(BASELINES_NDCG10).map(([name, score]) => ({ name, score, ours: false })),
-    { name: ourLabel, score: ndcg10, ours: true },
-  ].sort((a, b) => b.score - a.score);
-  for (const r of ranking) {
-    console.log(`  ${r.score.toFixed(3)}  ${r.name}${r.ours ? ' ← us' : ''}`);
-  }
-  const ourRank = ranking.findIndex((r) => r.ours) + 1;
-  console.log(`\n  Our rank: ${ourRank} / ${ranking.length}`);
-
-  const summary = {
-    runAt: new Date().toISOString(),
-    benchmark: `beir-${dataset}-bge`,
-    dataset,
-    model: BGE_MODEL,
-    queries: n,
-    corpusSize: corpus.length,
-    metrics: { ndcg10, mrr10, recall10, recall100, avgQueryLatencyMs: queryMs / n },
-    perQuery, // ADR-086: per-query metrics for paired bootstrap significance testing
-    baselines: BASELINES_NDCG10,
-    ourRank,
-    leaderboardLength: ranking.length,
-  };
-  mkdirSync(RUNS_DIR, { recursive: true });
-  const stamp = summary.runAt.replace(/[:.]/g, '-');
-  const safe = BGE_MODEL.replace(/\//g, '_');
-  writeFileSync(join(RUNS_DIR, `beir-${dataset}-bge-${safe}-${stamp}.json`), JSON.stringify(summary, null, 2));
-  writeFileSync(join(RUNS_DIR, `beir-${dataset}-bge-latest.json`), JSON.stringify(summary, null, 2));
-  console.log(`\nWrote ${join(RUNS_DIR, `beir-${dataset}-bge-${safe}-${stamp}.json`)}`);
-  process.exit(0);
-}
-
-main().catch((err) => { console.error(err); process.exit(1); });

package/scripts/run-beir-hybrid.mjs

@@ -1,284 +0,0 @@
-#!/usr/bin/env node
-// run-beir-hybrid.mjs — BM25 + dense (BGE) + RRF fusion + optional
-// cross-encoder rerank, evaluated on BEIR (ADR-087).
-//
-// Pipeline:
-//   1. BM25 over corpus (multi-field BM25 from hybrid-retrieval.ts)
-//   2. Dense cosine over BGE-base embeddings (cached from run-beir-bge.mjs)
-//   3. RRF fusion: score = sum over systems of 1/(k + rank) (k=60)
-//   4. Optional cross-encoder rerank of fused top-100 → top-10
-//
-// Reuses the .f32 doc-embedding cache from run-beir-bge.mjs — must run
-// that first to populate the cache.
-//
-// Usage:
-//   cd /tmp/beir-nfcorpus
-//   node /path/to/scripts/run-beir-hybrid.mjs                  # RRF only
-//   RERANK=1 node /path/to/scripts/run-beir-hybrid.mjs         # + cross-encoder rerank
-//   RRF_K=60 node /path/to/scripts/run-beir-hybrid.mjs         # tune RRF k
-//
-// ADR-087.
-
-import { readFileSync, writeFileSync, existsSync, mkdirSync } from 'node:fs';
-import { fileURLToPath } from 'node:url';
-import { dirname, join, resolve } from 'node:path';
-import { performance } from 'node:perf_hooks';
-
-const SCRIPT_DIR = dirname(fileURLToPath(import.meta.url));
-const CLI_ROOT = resolve(SCRIPT_DIR, '..');
-const RUFLO_ROOT = resolve(SCRIPT_DIR, '../../../..');
-const RUNS_DIR = join(RUFLO_ROOT, 'docs', 'benchmarks', 'runs');
-
-const DATA_DIR = process.env.BEIR_DATA_DIR || '/tmp/beir-nfcorpus/nfcorpus';
-const BGE_MODEL = process.env.BGE_MODEL || 'Xenova/bge-base-en-v1.5';
-const CACHE_DIR = join(process.env.CACHE_BASE_DIR || dirname(DATA_DIR), 'bge-cache');
-const RRF_K_DEFAULT = Number(process.env.RRF_K) || 60;
-const RERANK = process.env.RERANK === '1';
-const RERANK_TOP_K = Number(process.env.RERANK_TOP_K) || 100;
-const MAX_QUERIES = Number(process.env.MAX_QUERIES) || 0;
-
-// Same baselines table as run-beir-bge.mjs.
-const BASELINES_BY_DATASET = {
-  nfcorpus: { 'BM25 (Lucene)': 0.325, 'DocT5query': 0.328, 'TAS-B': 0.319, 'GenQ': 0.319, 'ColBERT': 0.305, 'Contriever': 0.328, 'GTR-XL': 0.343, 'SPLADE++': 0.347, 'BGE-large-v1.5 (pub)': 0.380, 'SBERT msmarco': 0.272 },
-  scifact:  { 'BM25 (Lucene)': 0.679, 'DocT5query': 0.675, 'TAS-B': 0.643, 'GenQ': 0.644, 'ColBERT': 0.671, 'Contriever': 0.677, 'GTR-XL': 0.662, 'SPLADE++': 0.704, 'BGE-large-v1.5 (pub)': 0.722, 'SBERT msmarco': 0.555 },
-  arguana:  { 'BM25 (Lucene)': 0.397, 'DocT5query': 0.349, 'TAS-B': 0.429, 'GenQ': 0.493, 'ColBERT': 0.233, 'Contriever': 0.379, 'GTR-XL': 0.439, 'SPLADE++': 0.521, 'BGE-large-v1.5 (pub)': 0.636, 'SBERT msmarco': 0.371 },
-  scidocs:  { 'BM25 (Lucene)': 0.158, 'DocT5query': 0.162, 'TAS-B': 0.149, 'GenQ': 0.143, 'ColBERT': 0.145, 'Contriever': 0.165, 'GTR-XL': 0.174, 'SPLADE++': 0.159, 'BGE-large-v1.5 (pub)': 0.225, 'SBERT msmarco': 0.122 },
-};
-// Iter 3: dataset-specific RRF weights for symmetric + dense-favored regimes (arguana: dense 1.6x stronger than BM25).
-// Iter 4: nfcorpus medical IR — downweight BM25 (0.7) to favor dense semantics over lexical noise.
-// Iter 26: arguana — align with validated nfcorpus/scifact recipe (1.0 dense, 0.2 BM25).
-const DATASET_RRF_WEIGHTS = {
-  arguana: { dense: 1.0, bm25: 0.2 },  // iter 26: match nfcorpus/scifact recipe (aggressive dense)
-  nfcorpus: { dense: 1.0, bm25: 0.0 }, // iter 14: pure dense fusion (0.2→0.0) RRF with single system + minMax norm preserved
-  scifact: { dense: 1.0, bm25: 0.05 },  // darwin iter2: small bm25 tie-breaker on top of pure dense (0.0→0.05)
-};
-function detectDataset(path) {
-  const p = path.toLowerCase();
-  for (const ds of Object.keys(BASELINES_BY_DATASET)) if (p.includes(ds)) return ds;
-  return 'nfcorpus';
-}
-
-function dcg(rels, k) { let s = 0; for (let i = 0; i < Math.min(rels.length, k); i++) s += (Math.pow(2, rels[i]) - 1) / Math.log2(i + 2); return s; }
-function ndcg(retrieved, qrels, k) { const rels = retrieved.slice(0, k).map((id) => qrels.get(id) ?? 0); const ideal = [...qrels.values()].sort((a, b) => b - a).slice(0, k); const idcg = dcg(ideal, k); return idcg > 0 ? dcg(rels, k) / idcg : 0; }
-function mrr(retrieved, qrels, k) { for (let i = 0; i < Math.min(retrieved.length, k); i++) if ((qrels.get(retrieved[i]) ?? 0) > 0) return 1 / (i + 1); return 0; }
-function recall(retrieved, qrels, k) { const tot = [...qrels.values()].filter((v) => v > 0).length; if (tot === 0) return 0; let h = 0; for (let i = 0; i < Math.min(retrieved.length, k); i++) if ((qrels.get(retrieved[i]) ?? 0) > 0) h++; return h / tot; }
-function cosine(a, b) { let s = 0; for (let i = 0; i < a.length; i++) s += a[i] * b[i]; return s; }
-function adaptiveRrfK(corpusSize) { return corpusSize < 20000 ? 40 : 60; }  // tighter weighting for small corpora
-function adaptiveTopK(corpusSize) { return corpusSize > 150000 ? 2000 : corpusSize > 50000 ? 1000 : 500; }  // pool more candidates for large corpora (iter 2)
-function minMaxNorm(scores) { const [min, max] = [Math.min(...scores), Math.max(...scores)]; return scores.map((s) => max === min ? 0.5 : (s - min) / (max - min)); }
-
-function loadJsonl(path) { return readFileSync(path, 'utf-8').split('\n').filter(Boolean).map((l) => JSON.parse(l)); }
-function loadQrels(path) { const q = new Map(); const lines = readFileSync(path, 'utf-8').split('\n'); for (let i = 1; i < lines.length; i++) { if (!lines[i].trim()) continue; const [qid, did, score] = lines[i].split('\t'); if (!q.has(qid)) q.set(qid, new Map()); q.get(qid).set(did, Number(score)); } return q; }
-
-function cachePath(suffix) { const safe = BGE_MODEL.replace(/\//g, '_'); return join(CACHE_DIR, `${safe}.${suffix}`); }
-function loadEmbeddings(dim) {
-  if (!existsSync(cachePath('ids')) || !existsSync(cachePath('f32'))) return null;
-  const ids = readFileSync(cachePath('ids'), 'utf-8').split('\n').filter(Boolean);
-  const raw = readFileSync(cachePath('f32'));
-  const buf = new Float32Array(raw.buffer, raw.byteOffset, raw.length / 4);
-  const embeds = [];
-  for (let i = 0; i < ids.length; i++) embeds.push(buf.slice(i * dim, (i + 1) * dim));
-  return { ids, embeds };
-}
-
-async function main() {
-  const dataset = detectDataset(DATA_DIR);
-  const BASELINES_NDCG10 = BASELINES_BY_DATASET[dataset];
-  const corpus = loadJsonl(join(DATA_DIR, 'corpus.jsonl'));
-  const RRF_K = adaptiveRrfK(corpus.length);  // adaptive k based on corpus size (iter 1: normalize scores + tighter k for small corpora)
-
-  const weights = DATASET_RRF_WEIGHTS[dataset] || { dense: 1.0, bm25: 1.0 };
-  console.log(`# BEIR ${dataset} — hybrid RRF${RERANK ? ' + cross-encoder rerank' : ''} (ADR-087 + iter1 + iter2 + iter3)`);
-  console.log(`Data:  ${DATA_DIR}`);
-  console.log(`Dense: ${BGE_MODEL}`);
-  console.log(`RRF k: ${RRF_K} (adaptive for corpus size ${corpus.length})${RERANK ? `, rerank top-${RERANK_TOP_K}` : ''}`);
-  console.log(`Normalization: min-max before RRF fusion`);
-  console.log(`Candidate pool: top-${adaptiveTopK(corpus.length)} per system (iter 2: scaled for large corpora)`);
-  console.log(`RRF weights: dense=${weights.dense} bm25=${weights.bm25} (iter 3: dataset-specific for ${dataset})`);
-  const queries = loadJsonl(join(DATA_DIR, 'queries.jsonl'));
-  const qrels = loadQrels(join(DATA_DIR, 'qrels/test.tsv'));
-  console.log(`Corpus: ${corpus.length} docs · Test qrels: ${qrels.size}`);
-
-  // BGE embeddings — must be pre-cached from run-beir-bge.mjs.
-  const bge = await import(join(CLI_ROOT, 'dist/src/memory/bge-embedder.js'));
-  const emb = await bge.getBgeEmbedder(BGE_MODEL);
-  if (!emb) { console.error('BGE failed:', bge.getBgeStatus()); process.exit(1); }
-  const dim = emb.dim();
-  const cached = loadEmbeddings(dim);
-  if (!cached) { console.error(`No cached BGE embeddings at ${cachePath('f32')}. Run run-beir-bge.mjs first.`); process.exit(2); }
-  const docIds = cached.ids;
-  const docEmbeds = cached.embeds;
-  console.log(`Loaded ${docIds.length} cached BGE embeddings`);
-
-  // BM25 setup — USE_LUCENE_BM25=1 uses Porter+Lucene-stopword BM25 (matches
-  // published BEIR baselines); default is hybrid-retrieval's multi-field BM25.
-  const USE_LUCENE_BM25 = process.env.USE_LUCENE_BM25 === '1';
-  let bm25Score, tokenizeFn, titleDocs, textDocs, titleStats, textStats, luceneDocs, luceneStats;
-  if (USE_LUCENE_BM25) {
-    const { luceneTokenize, buildLuceneCorpusStats, luceneBM25 } = await import(join(CLI_ROOT, 'dist/src/memory/lucene-bm25.js'));
-    tokenizeFn = luceneTokenize;
-    luceneDocs = corpus.map((d) => luceneTokenize(`${d.title || ''} ${d.text || ''}`));
-    luceneStats = buildLuceneCorpusStats(luceneDocs);
-    bm25Score = (qTokens, idx) => luceneBM25(qTokens, luceneDocs[idx], luceneStats);
-    console.log(`BM25: Lucene-style (Porter stem + Lucene stopwords + length norm) — ADR-088`);
-  } else {
-    const { tokenize, buildCorpusStats, multiFieldBM25 } = await import(join(CLI_ROOT, 'dist/src/memory/hybrid-retrieval.js'));
-    tokenizeFn = tokenize;
-    titleDocs = corpus.map((d) => tokenize(d.title || ''));
-    textDocs = corpus.map((d) => tokenize(d.text || ''));
-    titleStats = buildCorpusStats(titleDocs);
-    textStats = buildCorpusStats(textDocs);
-    const SUBJECT_WEIGHT = Number(process.env.SUBJECT_WEIGHT ?? 1.0);
-    const BODY_WEIGHT = Number(process.env.BODY_WEIGHT ?? 1.0);
-    bm25Score = (qTokens, idx) => multiFieldBM25(qTokens, titleDocs[idx], textDocs[idx], titleStats, textStats, SUBJECT_WEIGHT, BODY_WEIGHT);
-    console.log(`BM25: multi-field (title sw=${SUBJECT_WEIGHT}, text bw=${BODY_WEIGHT})`);
-  }
-
-  // Optional cross-encoder reranker.
-  let crossEncoder = null;
-  if (RERANK) {
-    const ce = await import(join(CLI_ROOT, 'dist/src/memory/cross-encoder-rerank.js'));
-    const ceFn = await ce.getCrossEncoder('Xenova/ms-marco-MiniLM-L-6-v2');
-    if (!ceFn) { console.error('Cross-encoder failed to load:', ce.getCrossEncoderStatus()); process.exit(3); }
-    crossEncoder = ceFn;
-    console.log('Cross-encoder loaded: Xenova/ms-marco-MiniLM-L-6-v2');
-  }
-
-  const queriesById = new Map(queries.map((q) => [q._id, q.text]));
-  const evalQueryIds = MAX_QUERIES ? [...qrels.keys()].slice(0, MAX_QUERIES) : [...qrels.keys()];
-
-  // Build doc id → corpus index lookup (BM25 returns indices, dense returns ids).
-  const idToIdx = new Map(docIds.map((id, i) => [id, i]));
-  // Need a reverse map too: corpus index → doc id (for BM25 over corpus order).
-  const corpusIdToIdx = new Map(corpus.map((d, i) => [d._id, i]));
-  const corpusIdxToId = corpus.map((d) => d._id);
-
-  console.log(`\nRunning ${evalQueryIds.length} queries...`);
-  let nSum = 0, mSum = 0, r10Sum = 0, r100Sum = 0, n = 0;
-  const perQuery = [];
-  const tQ = performance.now();
-
-  for (const qid of evalQueryIds) {
-    const qtext = queriesById.get(qid);
-    if (!qtext) continue;
-
-    // §1 — dense BGE retrieval (ADR-090: opt-in query prefix when BGE_QUERY_PREFIX=1)
-    const qEmb = (process.env.BGE_QUERY_PREFIX === '1' && emb.embedQuery)
-      ? await emb.embedQuery(qtext)
-      : await emb.embed(qtext);
-    const denseScored = new Array(docEmbeds.length);
-    for (let i = 0; i < docEmbeds.length; i++) denseScored[i] = { id: docIds[i], score: cosine(qEmb, docEmbeds[i]) };
-    denseScored.sort((a, b) => b.score - a.score);
-
-    // §2 — BM25 retrieval (Lucene or multi-field depending on USE_LUCENE_BM25)
-    const qTokens = tokenizeFn(qtext);
-    const bm25Scored = new Array(corpus.length);
-    for (let i = 0; i < corpus.length; i++) {
-      bm25Scored[i] = { id: corpusIdxToId[i], score: bm25Score(qTokens, i) };
-    }
-    bm25Scored.sort((a, b) => b.score - a.score);
-
-    // §3 — RRF fusion: normalize scores first, then score = sum over systems of 1/(k + rank).
-    // Min-max normalize each system's scores to [0,1] for fair fusion (iter 1 optimization).
-    // For large corpora, pull more candidates before fusion (iter 2 optimization).
-    const TOP_PER_SYSTEM = adaptiveTopK(corpus.length);
-    const denseTopK = denseScored.slice(0, Math.min(TOP_PER_SYSTEM, denseScored.length));
-    const bm25TopK = bm25Scored.slice(0, Math.min(TOP_PER_SYSTEM, bm25Scored.length)).filter((s) => s.score > 0);
-    const denseScoresNorm = minMaxNorm(denseTopK.map((s) => s.score));
-    const bm25ScoresNorm = minMaxNorm(bm25TopK.map((s) => s.score));
-    denseTopK.forEach((d, i) => { d.scoreNorm = denseScoresNorm[i]; });
-    bm25TopK.forEach((d, i) => { d.scoreNorm = bm25ScoresNorm[i]; });
-
-    const rrfScores = new Map();
-    const weights = DATASET_RRF_WEIGHTS[dataset] || { dense: 1.0, bm25: 1.0 };  // iter 3: dataset-specific weights
-    for (let r = 0; r < denseTopK.length; r++) {
-      const id = denseTopK[r].id;
-      rrfScores.set(id, (rrfScores.get(id) || 0) + weights.dense / (RRF_K + r + 1));
-    }
-    for (let r = 0; r < bm25TopK.length; r++) {
-      const id = bm25TopK[r].id;
-      rrfScores.set(id, (rrfScores.get(id) || 0) + weights.bm25 / (RRF_K + r + 1));
-    }
-    const fused = [...rrfScores.entries()]
-      .map(([id, score]) => ({ id, score }))
-      .sort((a, b) => b.score - a.score)
-      .slice(0, RERANK ? RERANK_TOP_K : 100);
-
-    let final = fused;
-
-    // §4 — optional cross-encoder rerank.
-    if (crossEncoder && fused.length > 0) {
-      const docsForRerank = fused.map(({ id }) => {
-        const ci = corpusIdToIdx.get(id);
-        const d = corpus[ci];
-        return `${d.title || ''} ${d.text || ''}`.slice(0, 4096);
-      });
-      const ceScores = await crossEncoder.scoreBatch(qtext, docsForRerank);
-      final = fused
-        .map((f, i) => ({ id: f.id, score: ceScores[i], rrf: f.score }))
-        .sort((a, b) => b.score - a.score);
-    }
-
-    const top100 = final.slice(0, 100).map((s) => s.id);
-    const qmap = qrels.get(qid);
-    const qNdcg = ndcg(top100, qmap, 10);
-    const qMrr = mrr(top100, qmap, 10);
-    const qR10 = recall(top100, qmap, 10);
-    const qR100 = recall(top100, qmap, 100);
-    nSum += qNdcg; mSum += qMrr; r10Sum += qR10; r100Sum += qR100; n++;
-    perQuery.push({ qid, ndcg10: qNdcg, mrr10: qMrr, recall10: qR10, recall100: qR100 });
-    if (n % 50 === 0) {
-      const elapsed = (performance.now() - tQ) / 1000;
-      console.log(`  ${n}/${evalQueryIds.length} in ${elapsed.toFixed(0)}s  running nDCG@10=${(nSum / n).toFixed(4)}`);
-    }
-  }
-  const queryMs = performance.now() - tQ;
-
-  const ndcg10 = nSum / n;
-  const mrr10 = mSum / n;
-  const recall10 = r10Sum / n;
-  const recall100 = r100Sum / n;
-
-  console.log(`\n=== Results (N=${n}, ${dataset}, BM25+BGE-base RRF k=${RRF_K}${RERANK ? ' + CE rerank' : ''}) ===`);
-  console.log(`  nDCG@10:    ${ndcg10.toFixed(4)}`);
-  console.log(`  MRR@10:     ${mrr10.toFixed(4)}`);
-  console.log(`  Recall@10:  ${recall10.toFixed(4)}`);
-  console.log(`  Recall@100: ${recall100.toFixed(4)}`);
-  console.log(`  Avg query latency: ${(queryMs / n).toFixed(0)}ms`);
-
-  const ourLabel = `ruflo + BM25+BGE-base RRF${RERANK ? '+CE' : ''}`;
-  const ranking = [
-    ...Object.entries(BASELINES_NDCG10).map(([name, score]) => ({ name, score, ours: false })),
-    { name: ourLabel, score: ndcg10, ours: true },
-  ].sort((a, b) => b.score - a.score);
-  console.log(`\n=== vs ${dataset} listed baselines ===`);
-  for (const r of ranking) console.log(`  ${r.score.toFixed(3)}  ${r.name}${r.ours ? ' ← us' : ''}`);
-  const ourRank = ranking.findIndex((r) => r.ours) + 1;
-  console.log(`\n  Our rank: ${ourRank} / ${ranking.length}`);
-
-  const summary = {
-    runAt: new Date().toISOString(),
-    benchmark: `beir-${dataset}-hybrid${RERANK ? '-rerank' : ''}`,
-    dataset,
-    pipeline: `BM25+BGE RRF${RERANK ? '+CE-rerank' : ''}`,
-    bgeModel: BGE_MODEL,
-    rrfK: RRF_K,
-    rerank: RERANK,
-    queries: n,
-    corpusSize: corpus.length,
-    metrics: { ndcg10, mrr10, recall10, recall100, avgQueryLatencyMs: queryMs / n },
-    perQuery,
-    baselines: BASELINES_NDCG10,
-    ourRank,
-    leaderboardLength: ranking.length,
-  };
-  mkdirSync(RUNS_DIR, { recursive: true });
-  const stamp = summary.runAt.replace(/[:.]/g, '-');
-  const suffix = RERANK ? 'hybrid-rerank' : 'hybrid-rrf';
-  writeFileSync(join(RUNS_DIR, `beir-${dataset}-${suffix}-${stamp}.json`), JSON.stringify(summary, null, 2));
-  writeFileSync(join(RUNS_DIR, `beir-${dataset}-${suffix}-latest.json`), JSON.stringify(summary, null, 2));
-  console.log(`\nWrote ${join(RUNS_DIR, `beir-${dataset}-${suffix}-${stamp}.json`)}`);
-  process.exit(0);
-}
-
-main().catch((err) => { console.error(err); process.exit(1); });