@claude-flow/cli 3.10.35 → 3.10.37

package/dist/src/log-filters.d.ts

@@ -1,5 +1,5 @@
 /**
- * Console filter installed at the top of every entry point. Two jobs:
+ * Console filter installed at the top of every entry point. Three jobs:
  *
  * 1. Suppress the cosmetic "[AgentDB Patch] Controller index not found"
  *    warning emitted by agentic-flow's runtime patch (it expects agentdb
@@ -13,20 +13,33 @@
  *    parallel embedder) to stderr. The libraries use `console.log` for
  *    progress messages like "Loading model:" and "  Downloading: ...",
  *    which corrupts MCP JSON-RPC stdio (#2253) and is generally noise on
- *    stdout. We never want these on stdout — stderr is the right channel
- *    for progress to a TTY user, and the MCP stdio framer reads stdout
- *    only, so this keeps the protocol clean without dropping useful
- *    diagnostics.
+ *    stdout.
+ *
+ * 3. Suppress agentdb's mock-embedder-fallback warning cluster emitted by
+ *    `agentdb/dist/controllers/EmbeddingService.js` lines 48–56 when
+ *    transformers.js initialisation fails (commonly: macOS arm64 without
+ *    `brew install vips` — sharp can't load `libvips-cpp.42.dylib`). The
+ *    warnings advertise that agentdb is "falling back to mock embeddings"
+ *    — but `memory-bridge.ts::rescueAgentdbEmbedder` monkey-patches
+ *    agentdb's embedder to delegate to our working ruvector ONNX pipeline
+ *    in that exact case, so the user is NOT actually on mock embeddings.
+ *    Letting the warning through is misleading and gets reported as a
+ *    bug (user-reported 2026-06-02, no GH issue). Suppression is safe
+ *    because the rescue handles the underlying condition; if the rescue
+ *    itself fails, the user still sees `[WARN] No results found` from
+ *    the calling command which surfaces the real symptom.
  *
  * This file MUST be imported as the first side-effect import in any entry
- * point so the patch is in place before agentic-flow / ruvector (and
- * anything that transitively imports them) loads. ES module imports are
- * evaluated before the file's own top-level code, so putting this in
+ * point so the patch is in place before agentic-flow / ruvector / agentdb
+ * (and anything that transitively imports them) loads. ES module imports
+ * are evaluated before the file's own top-level code, so putting this in
  * src/index.ts directly would race with transitive eager imports.
  */
 declare const isCosmeticAgentdbPatchNoise: (msg: unknown) => boolean;
 declare const STDERR_REDIRECT_PREFIXES: string[];
+declare const AGENTDB_MOCK_FALLBACK_DROP_PREFIXES: string[];
 declare const shouldRedirectToStderr: (msg: unknown) => boolean;
+declare const isAgentdbMockFallbackNoise: (msg: unknown) => boolean;
 declare const origWarn: (message?: any, ...optionalParams: any[]) => void;
 declare const origLog: (message?: any, ...optionalParams: any[]) => void;
 declare const origError: (message?: any, ...optionalParams: any[]) => void;

package/dist/src/log-filters.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"log-filters.d.ts","sourceRoot":"","sources":["../../src/log-filters.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAoCG;AAEH,QAAA,MAAM,2BAA2B,GAAI,KAAK,OAAO,KAAG,OAGnD,CAAC;AAMF,QAAA,MAAM,wBAAwB,UAQ7B,CAAC;AAOF,QAAA,MAAM,mCAAmC,UAUxC,CAAC;AAEF,QAAA,MAAM,sBAAsB,GAAI,KAAK,OAAO,KAAG,OAM9C,CAAC;AAEF,QAAA,MAAM,0BAA0B,GAAI,KAAK,OAAO,KAAG,OAMlD,CAAC;AAEF,QAAA,MAAM,QAAQ,mDAA6B,CAAC;AAC5C,QAAA,MAAM,OAAO,mDAA4B,CAAC;AAC1C,QAAA,MAAM,SAAS,mDAA8B,CAAC"}

package/dist/src/log-filters.js

@@ -1,6 +1,6 @@
 "use strict";
 /**
- * Console filter installed at the top of every entry point. Two jobs:
+ * Console filter installed at the top of every entry point. Three jobs:
  *
  * 1. Suppress the cosmetic "[AgentDB Patch] Controller index not found"
  *    warning emitted by agentic-flow's runtime patch (it expects agentdb
@@ -14,15 +14,26 @@
  *    parallel embedder) to stderr. The libraries use `console.log` for
  *    progress messages like "Loading model:" and "  Downloading: ...",
  *    which corrupts MCP JSON-RPC stdio (#2253) and is generally noise on
- *    stdout. We never want these on stdout — stderr is the right channel
- *    for progress to a TTY user, and the MCP stdio framer reads stdout
- *    only, so this keeps the protocol clean without dropping useful
- *    diagnostics.
+ *    stdout.
+ *
+ * 3. Suppress agentdb's mock-embedder-fallback warning cluster emitted by
+ *    `agentdb/dist/controllers/EmbeddingService.js` lines 48–56 when
+ *    transformers.js initialisation fails (commonly: macOS arm64 without
+ *    `brew install vips` — sharp can't load `libvips-cpp.42.dylib`). The
+ *    warnings advertise that agentdb is "falling back to mock embeddings"
+ *    — but `memory-bridge.ts::rescueAgentdbEmbedder` monkey-patches
+ *    agentdb's embedder to delegate to our working ruvector ONNX pipeline
+ *    in that exact case, so the user is NOT actually on mock embeddings.
+ *    Letting the warning through is misleading and gets reported as a
+ *    bug (user-reported 2026-06-02, no GH issue). Suppression is safe
+ *    because the rescue handles the underlying condition; if the rescue
+ *    itself fails, the user still sees `[WARN] No results found` from
+ *    the calling command which surfaces the real symptom.
  *
  * This file MUST be imported as the first side-effect import in any entry
- * point so the patch is in place before agentic-flow / ruvector (and
- * anything that transitively imports them) loads. ES module imports are
- * evaluated before the file's own top-level code, so putting this in
+ * point so the patch is in place before agentic-flow / ruvector / agentdb
+ * (and anything that transitively imports them) loads. ES module imports
+ * are evaluated before the file's own top-level code, so putting this in
  * src/index.ts directly would race with transitive eager imports.
  */
 const isCosmeticAgentdbPatchNoise = (msg) => {
@@ -42,6 +53,22 @@ const STDERR_REDIRECT_PREFIXES = [
     '✅ ', // ruvector-onnx-embeddings-wasm parallel-embedder.mjs (workers ready)
     '  Disk cache hit: ', // ruvector-onnx-embeddings-wasm parallel-embedder.mjs
 ];
+// (3) Suppress the agentdb mock-embedder-fallback cluster. Each entry below
+// matches the EXACT prefix `console.warn` argument from
+// agentdb/dist/controllers/EmbeddingService.js:48–56. Keep this list
+// pinned to upstream lines, not broadened heuristically — broader filters
+// risk hiding real signals (audit_1776483149979 lesson).
+const AGENTDB_MOCK_FALLBACK_DROP_PREFIXES = [
+    'Transformers.js initialization failed:', // line 48 — multi-line because the error has multi-line .message
+    '   Falling back to mock embeddings for testing', // line 49
+    '   This is normal if:', // line 50
+    '     - Running offline/without internet access', // line 51
+    '     - Model not yet downloaded', // line 52
+    '     - Network connectivity issues', // line 53
+    '   To use real embeddings:', // line 54
+    '     - Ensure internet connectivity for first', // line 55
+    '     - Or pre-download: npx agentdb', // line 56
+];
 const shouldRedirectToStderr = (msg) => {
     const s = String(msg ?? '');
     for (const prefix of STDERR_REDIRECT_PREFIXES) {
@@ -50,12 +77,22 @@ const shouldRedirectToStderr = (msg) => {
     }
     return false;
 };
+const isAgentdbMockFallbackNoise = (msg) => {
+    const s = String(msg ?? '');
+    for (const prefix of AGENTDB_MOCK_FALLBACK_DROP_PREFIXES) {
+        if (s.startsWith(prefix))
+            return true;
+    }
+    return false;
+};
 const origWarn = console.warn.bind(console);
 const origLog = console.log.bind(console);
 const origError = console.error.bind(console);
 console.warn = (...args) => {
     if (isCosmeticAgentdbPatchNoise(args[0]))
         return;
+    if (isAgentdbMockFallbackNoise(args[0]))
+        return;
     origWarn(...args);
 };
 console.log = (...args) => {

package/dist/src/log-filters.js.map

@@ -1 +1 @@
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+{"version":3,"file":"log-filters.js","sourceRoot":"","sources":["../../src/log-filters.ts"],"names":[],"mappings":";AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAoCG;AAEH,MAAM,2BAA2B,GAAG,CAAC,GAAY,EAAW,EAAE;IAC5D,MAAM,CAAC,GAAG,MAAM,CAAC,GAAG,IAAI,EAAE,CAAC,CAAC;IAC5B,OAAO,CAAC,CAAC,QAAQ,CAAC,iBAAiB,CAAC,IAAI,CAAC,CAAC,QAAQ,CAAC,4BAA4B,CAAC,CAAC;AACnF,CAAC,CAAC;AAEF,0EAA0E;AAC1E,0EAA0E;AAC1E,4EAA4E;AAC5E,yCAAyC;AACzC,MAAM,wBAAwB,GAAG;IAC/B,iBAAiB,EAAiB,qDAAqD;IACvF,iBAAiB,EAAiB,qDAAqD;IACvF,eAAe,EAAmB,qDAAqD;IACvF,qBAAqB,EAAa,qDAAqD;IACvF,kBAAkB,EAAgB,sDAAsD;IACxF,IAAI,EAA6B,sEAAsE;IACvG,oBAAoB,EAAc,sDAAsD;CACzF,CAAC;AAEF,4EAA4E;AAC5E,wDAAwD;AACxD,qEAAqE;AACrE,0EAA0E;AAC1E,yDAAyD;AACzD,MAAM,mCAAmC,GAAG;IAC1C,wCAAwC,EAAS,iEAAiE;IAClH,gDAAgD,EAAE,UAAU;IAC5D,uBAAuB,EAA2B,UAAU;IAC5D,gDAAgD,EAAE,UAAU;IAC5D,iCAAiC,EAAiB,UAAU;IAC5D,oCAAoC,EAAc,UAAU;IAC5D,4BAA4B,EAAsB,UAAU;IAC5D,+CAA+C,EAAG,UAAU;IAC5D,qCAAqC,EAAa,UAAU;CAC7D,CAAC;AAEF,MAAM,sBAAsB,GAAG,CAAC,GAAY,EAAW,EAAE;IACvD,MAAM,CAAC,GAAG,MAAM,CAAC,GAAG,IAAI,EAAE,CAAC,CAAC;IAC5B,KAAK,MAAM,MAAM,IAAI,wBAAwB,EAAE,CAAC;QAC9C,IAAI,CAAC,CAAC,UAAU,CAAC,MAAM,CAAC;YAAE,OAAO,IAAI,CAAC;IACxC,CAAC;IACD,OAAO,KAAK,CAAC;AACf,CAAC,CAAC;AAEF,MAAM,0BAA0B,GAAG,CAAC,GAAY,EAAW,EAAE;IAC3D,MAAM,CAAC,GAAG,MAAM,CAAC,GAAG,IAAI,EAAE,CAAC,CAAC;IAC5B,KAAK,MAAM,MAAM,IAAI,mCAAmC,EAAE,CAAC;QACzD,IAAI,CAAC,CAAC,UAAU,CAAC,MAAM,CAAC;YAAE,OAAO,IAAI,CAAC;IACxC,CAAC;IACD,OAAO,KAAK,CAAC;AACf,CAAC,CAAC;AAEF,MAAM,QAAQ,GAAG,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;AAC5C,MAAM,OAAO,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;AAC1C,MAAM,SAAS,GAAG,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;AAE9C,OAAO,CAAC,IAAI,GAAG,CAAC,GAAG,IAAe,EAAE,EAAE;IACpC,IAAI,2BAA2B,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAAE,OAAO;IACjD,IAAI,0BAA0B,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAAE,OAAO;IAChD,QAAQ,CAAC,GAAG,IAAI,CAAC,CAAC;AACpB,CAAC,CAAC;AACF,OAAO,CAAC,GAAG,GAAG,CAAC,GAAG,IAAe,EAAE,EAAE;IACnC,IAAI,2BAA2B,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAAE,OAAO;IACjD,IAAI,sBAAsB,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;QACpC,SAAS,CAAC,GAAG,IAAI,CAAC,CAAC;QACnB,OAAO;IACT,CAAC;IACD,OAAO,CAAC,GAAG,IAAI,CAAC,CAAC;AACnB,CAAC,CAAC"}

package/dist/src/mcp-tools/agentdb-tools.js

@@ -1099,21 +1099,21 @@ function buildKHopCTE(nodeId, depth, relation, maxNodes) {
     // since validateIdentifier has already vetted the value; but we sanitize quotes anyway).
     const safeNodeId = nodeId.replace(/'/g, "''");
     const relFilter = relation ? `AND e.relation = '${relation.replace(/'/g, "''")}'` : '';
-    return `
-    WITH RECURSIVE khop(node_id, hop_depth) AS (
-      SELECT '${safeNodeId}', 0
-      UNION
-      SELECT e.target_id, k.hop_depth + 1
-      FROM graph_edges e
-      JOIN khop k ON e.source_id = k.node_id
-      WHERE k.hop_depth < ${depth} ${relFilter}
-    )
-    SELECT DISTINCT node_id, MIN(hop_depth) as depth
-    FROM khop
-    WHERE node_id != '${safeNodeId}'
-    GROUP BY node_id
-    ORDER BY depth, node_id
-    LIMIT ${maxNodes}
+    return `
+    WITH RECURSIVE khop(node_id, hop_depth) AS (
+      SELECT '${safeNodeId}', 0
+      UNION
+      SELECT e.target_id, k.hop_depth + 1
+      FROM graph_edges e
+      JOIN khop k ON e.source_id = k.node_id
+      WHERE k.hop_depth < ${depth} ${relFilter}
+    )
+    SELECT DISTINCT node_id, MIN(hop_depth) as depth
+    FROM khop
+    WHERE node_id != '${safeNodeId}'
+    GROUP BY node_id
+    ORDER BY depth, node_id
+    LIMIT ${maxNodes}
   `;
 }
 function cosineSim(a, b) {

package/dist/src/memory/graph-edge-writer.js

@@ -62,21 +62,21 @@ export async function getBridgeDb(customDbPath, opts) {
         }
         // Ensure graph_edges table exists (in case this is an older DB that
         // predates ADR-130 Phase 1 schema migration).
-        db.run(`
-      CREATE TABLE IF NOT EXISTS graph_edges (
-        id              TEXT PRIMARY KEY,
-        source_id       TEXT NOT NULL,
-        target_id       TEXT NOT NULL,
-        relation        TEXT NOT NULL,
-        weight          REAL DEFAULT 1.0,
-        confidence      REAL DEFAULT 1.0,
-        decay_rate      REAL DEFAULT 0.0,
-        last_reinforced TEXT,
-        witness_id      TEXT,
-        embedding_ref   TEXT,
-        metadata        TEXT,
-        created_at      TEXT NOT NULL
-      )
+        db.run(`
+      CREATE TABLE IF NOT EXISTS graph_edges (
+        id              TEXT PRIMARY KEY,
+        source_id       TEXT NOT NULL,
+        target_id       TEXT NOT NULL,
+        relation        TEXT NOT NULL,
+        weight          REAL DEFAULT 1.0,
+        confidence      REAL DEFAULT 1.0,
+        decay_rate      REAL DEFAULT 0.0,
+        last_reinforced TEXT,
+        witness_id      TEXT,
+        embedding_ref   TEXT,
+        metadata        TEXT,
+        created_at      TEXT NOT NULL
+      )
     `);
         db.run(`CREATE INDEX IF NOT EXISTS idx_graph_edges_source ON graph_edges (source_id)`);
         db.run(`CREATE INDEX IF NOT EXISTS idx_graph_edges_target ON graph_edges (target_id)`);
@@ -132,9 +132,9 @@ export async function insertGraphEdge(input) {
             embeddingRef = encodeEmbedding(input.embedding);
         }
         const metaStr = input.metadata ? JSON.stringify(input.metadata) : null;
-        db.run(`INSERT OR IGNORE INTO graph_edges
-        (id, source_id, target_id, relation, weight, confidence, decay_rate,
-         last_reinforced, witness_id, embedding_ref, metadata, created_at)
+        db.run(`INSERT OR IGNORE INTO graph_edges
+        (id, source_id, target_id, relation, weight, confidence, decay_rate,
+         last_reinforced, witness_id, embedding_ref, metadata, created_at)
        VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`, [
             id,
             input.sourceId,

package/dist/src/memory/memory-bridge.js

@@ -495,25 +495,25 @@ function getDb(registry) {
     const db = agentdb.database;
     // Ensure memory_entries table exists (idempotent)
     try {
-        db.exec(`CREATE TABLE IF NOT EXISTS memory_entries (
-      id TEXT PRIMARY KEY,
-      key TEXT NOT NULL,
-      namespace TEXT DEFAULT 'default',
-      content TEXT NOT NULL,
-      type TEXT DEFAULT 'semantic',
-      embedding TEXT,
-      embedding_model TEXT DEFAULT 'local',
-      embedding_dimensions INTEGER,
-      tags TEXT,
-      metadata TEXT,
-      owner_id TEXT,
-      created_at INTEGER NOT NULL DEFAULT (strftime('%s', 'now') * 1000),
-      updated_at INTEGER NOT NULL DEFAULT (strftime('%s', 'now') * 1000),
-      expires_at INTEGER,
-      last_accessed_at INTEGER,
-      access_count INTEGER DEFAULT 0,
-      status TEXT DEFAULT 'active',
-      UNIQUE(namespace, key)
+        db.exec(`CREATE TABLE IF NOT EXISTS memory_entries (
+      id TEXT PRIMARY KEY,
+      key TEXT NOT NULL,
+      namespace TEXT DEFAULT 'default',
+      content TEXT NOT NULL,
+      type TEXT DEFAULT 'semantic',
+      embedding TEXT,
+      embedding_model TEXT DEFAULT 'local',
+      embedding_dimensions INTEGER,
+      tags TEXT,
+      metadata TEXT,
+      owner_id TEXT,
+      created_at INTEGER NOT NULL DEFAULT (strftime('%s', 'now') * 1000),
+      updated_at INTEGER NOT NULL DEFAULT (strftime('%s', 'now') * 1000),
+      expires_at INTEGER,
+      last_accessed_at INTEGER,
+      access_count INTEGER DEFAULT 0,
+      status TEXT DEFAULT 'active',
+      UNIQUE(namespace, key)
     )`);
         // Ensure indexes
         db.exec(`CREATE INDEX IF NOT EXISTS idx_bridge_ns ON memory_entries(namespace)`);
@@ -648,15 +648,15 @@ export async function bridgeStoreEntry(options) {
         }
         // better-sqlite3 uses synchronous .run() with positional params
         const insertSql = options.upsert
-            ? `INSERT OR REPLACE INTO memory_entries (
-          id, key, namespace, content, type,
-          embedding, embedding_dimensions, embedding_model,
-          tags, metadata, created_at, updated_at, expires_at, status
+            ? `INSERT OR REPLACE INTO memory_entries (
+          id, key, namespace, content, type,
+          embedding, embedding_dimensions, embedding_model,
+          tags, metadata, created_at, updated_at, expires_at, status
         ) VALUES (?, ?, ?, ?, 'semantic', ?, ?, ?, ?, ?, ?, ?, ?, 'active')`
-            : `INSERT INTO memory_entries (
-          id, key, namespace, content, type,
-          embedding, embedding_dimensions, embedding_model,
-          tags, metadata, created_at, updated_at, expires_at, status
+            : `INSERT INTO memory_entries (
+          id, key, namespace, content, type,
+          embedding, embedding_dimensions, embedding_model,
+          tags, metadata, created_at, updated_at, expires_at, status
         ) VALUES (?, ?, ?, ?, 'semantic', ?, ?, ?, ?, ?, ?, ?, ?, 'active')`;
         // #1941: provision a `vector_indexes` row for this namespace before the
         // entry insert. AgentDB's HNSW/router keys lookups by namespace via this
@@ -726,11 +726,11 @@ export async function bridgeSearchEntries(options) {
             : '';
         let rows;
         try {
-            const stmt = ctx.db.prepare(`
-        SELECT id, key, namespace, content, embedding
-        FROM memory_entries
-        WHERE status = 'active' ${nsFilter}
-        LIMIT 1000
+            const stmt = ctx.db.prepare(`
+        SELECT id, key, namespace, content, embedding
+        FROM memory_entries
+        WHERE status = 'active' ${nsFilter}
+        LIMIT 1000
       `);
             rows = effectiveNamespace !== 'all' ? stmt.all(effectiveNamespace) : stmt.all();
         }
@@ -830,12 +830,12 @@ export async function bridgeListEntries(options) {
         // List
         const entries = [];
         try {
-            const stmt = ctx.db.prepare(`
-        SELECT id, key, namespace, content, embedding, access_count, created_at, updated_at
-        FROM memory_entries
-        WHERE ${statusFilter} ${nsFilter}
-        ORDER BY updated_at DESC
-        LIMIT ? OFFSET ?
+            const stmt = ctx.db.prepare(`
+        SELECT id, key, namespace, content, embedding, access_count, created_at, updated_at
+        FROM memory_entries
+        WHERE ${statusFilter} ${nsFilter}
+        ORDER BY updated_at DESC
+        LIMIT ? OFFSET ?
       `);
             const rows = stmt.all(...nsParams, limit, offset);
             for (const row of rows) {
@@ -904,11 +904,11 @@ export async function bridgeGetEntry(options) {
         }
         let row;
         try {
-            const stmt = ctx.db.prepare(`
-        SELECT id, key, namespace, content, embedding, access_count, created_at, updated_at, tags
-        FROM memory_entries
-        WHERE status = 'active' AND key = ? AND namespace = ?
-        LIMIT 1
+            const stmt = ctx.db.prepare(`
+        SELECT id, key, namespace, content, embedding, access_count, created_at, updated_at, tags
+        FROM memory_entries
+        WHERE status = 'active' AND key = ? AND namespace = ?
+        LIMIT 1
       `);
             row = stmt.get(key, namespace);
         }
@@ -972,10 +972,10 @@ export async function bridgeDeleteEntry(options) {
         // Soft delete using parameterized query
         let changes = 0;
         try {
-            const result = ctx.db.prepare(`
-        UPDATE memory_entries
-        SET status = 'deleted', updated_at = ?
-        WHERE key = ? AND namespace = ? AND status = 'active'
+            const result = ctx.db.prepare(`
+        UPDATE memory_entries
+        SET status = 'deleted', updated_at = ?
+        WHERE key = ? AND namespace = ? AND status = 'active'
       `).run(Date.now(), key, namespace);
             changes = result?.changes ?? 0;
         }
@@ -1125,11 +1125,11 @@ export async function bridgeSearchHNSW(queryEmbedding, options, dbPath) {
             : '';
         let rows;
         try {
-            const stmt = ctx.db.prepare(`
-        SELECT id, key, namespace, content, embedding
-        FROM memory_entries
-        WHERE status = 'active' AND embedding IS NOT NULL ${nsFilter}
-        LIMIT 10000
+            const stmt = ctx.db.prepare(`
+        SELECT id, key, namespace, content, embedding
+        FROM memory_entries
+        WHERE status = 'active' AND embedding IS NOT NULL ${nsFilter}
+        LIMIT 10000
       `);
             rows = nsFilter
                 ? stmt.all(options.namespace)
@@ -1181,12 +1181,12 @@ export async function bridgeAddToHNSW(id, embedding, entry, dbPath) {
     try {
         const now = Date.now();
         const embeddingJson = JSON.stringify(embedding);
-        ctx.db.prepare(`
-      INSERT OR REPLACE INTO memory_entries (
-        id, key, namespace, content, type,
-        embedding, embedding_dimensions, embedding_model,
-        created_at, updated_at, status
-      ) VALUES (?, ?, ?, ?, 'semantic', ?, ?, 'Xenova/all-MiniLM-L6-v2', ?, ?, 'active')
+        ctx.db.prepare(`
+      INSERT OR REPLACE INTO memory_entries (
+        id, key, namespace, content, type,
+        embedding, embedding_dimensions, embedding_model,
+        created_at, updated_at, status
+      ) VALUES (?, ?, ?, ?, 'semantic', ?, ?, 'Xenova/all-MiniLM-L6-v2', ?, ?, 'active')
     `).run(id, entry.key, entry.namespace, entry.content, embeddingJson, embedding.length, now, now);
         return true;
     }
@@ -1508,9 +1508,9 @@ export async function bridgeRecordCausalEdge(options) {
         const ctx = getDb(registry);
         if (ctx) {
             try {
-                ctx.db.prepare(`
-          INSERT OR REPLACE INTO memory_entries (id, key, namespace, content, type, created_at, updated_at, status)
-          VALUES (?, ?, 'causal-edges', ?, 'procedural', ?, ?, 'active')
+                ctx.db.prepare(`
+          INSERT OR REPLACE INTO memory_entries (id, key, namespace, content, type, created_at, updated_at, status)
+          VALUES (?, ?, 'causal-edges', ?, 'procedural', ?, ?, 'active')
         `).run(generateId('edge'), `${options.sourceId}→${options.targetId}`, JSON.stringify(options), Date.now(), Date.now());
                 return { success: true, controller: 'bridge-fallback' };
             }
@@ -1589,10 +1589,10 @@ export async function bridgeDeleteHierarchical(options) {
         const ctx = getDb(registry);
         if (ctx) {
             try {
-                const result = ctx.db.prepare(`
-          UPDATE memory_entries
-          SET status = 'deleted', updated_at = ?
-          WHERE key = ? AND namespace LIKE 'hierarchical%' AND status = 'active'
+                const result = ctx.db.prepare(`
+          UPDATE memory_entries
+          SET status = 'deleted', updated_at = ?
+          WHERE key = ? AND namespace LIKE 'hierarchical%' AND status = 'active'
         `).run(Date.now(), key);
                 const changes = result?.changes ?? 0;
                 if (changes > 0) {
@@ -1668,10 +1668,10 @@ export async function bridgeDeleteCausalEdge(options) {
         const ctx = getDb(registry);
         if (ctx) {
             try {
-                const result = ctx.db.prepare(`
-          UPDATE memory_entries
-          SET status = 'deleted', updated_at = ?
-          WHERE key = ? AND namespace = 'causal-edges' AND status = 'active'
+                const result = ctx.db.prepare(`
+          UPDATE memory_entries
+          SET status = 'deleted', updated_at = ?
+          WHERE key = ? AND namespace = 'causal-edges' AND status = 'active'
         `).run(Date.now(), edgeKey);
                 const changes = result?.changes ?? 0;
                 if (changes > 0) {
@@ -1743,18 +1743,18 @@ export async function bridgeDeleteCausalNode(options) {
         let deletedEdges = 0;
         let deletedNode = false;
         try {
-            const edgeResult = ctx.db.prepare(`
-        UPDATE memory_entries
-        SET status = 'deleted', updated_at = ?
-        WHERE namespace = 'causal-edges'
-          AND status = 'active'
-          AND (key LIKE ? OR key LIKE ?)
+            const edgeResult = ctx.db.prepare(`
+        UPDATE memory_entries
+        SET status = 'deleted', updated_at = ?
+        WHERE namespace = 'causal-edges'
+          AND status = 'active'
+          AND (key LIKE ? OR key LIKE ?)
       `).run(Date.now(), `${nodeId}→%`, `%→${nodeId}`);
             deletedEdges = edgeResult?.changes ?? 0;
-            const nodeResult = ctx.db.prepare(`
-        UPDATE memory_entries
-        SET status = 'deleted', updated_at = ?
-        WHERE key = ? AND status = 'active'
+            const nodeResult = ctx.db.prepare(`
+        UPDATE memory_entries
+        SET status = 'deleted', updated_at = ?
+        WHERE key = ? AND status = 'active'
       `).run(Date.now(), nodeId);
             deletedNode = (nodeResult?.changes ?? 0) > 0;
             await logAttestation(registry, 'delete', nodeId, { namespace: 'causal-nodes', deletedEdges });
@@ -2187,11 +2187,11 @@ export async function bridgeGetAllEmbeddings(options) {
     try {
         const dims = options?.dimensions ?? 384;
         const maxRows = options?.limit ?? 50000;
-        const rows = ctx.db.prepare(`
-      SELECT id, key, namespace, embedding
-      FROM memory_entries
-      WHERE status = 'active' AND embedding IS NOT NULL
-      LIMIT ?
+        const rows = ctx.db.prepare(`
+      SELECT id, key, namespace, embedding
+      FROM memory_entries
+      WHERE status = 'active' AND embedding IS NOT NULL
+      LIMIT ?
     `).all(maxRows);
         const results = [];
         for (const row of rows) {