@citeark/agent 0.3.20
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +202 -0
- package/README.md +128 -0
- package/data/dataset-source-registry.v1.json +300 -0
- package/dist/arkgraph/boot.js +6 -0
- package/dist/arkgraph/index.html +1 -0
- package/dist/arkgraph/viewer.css +1 -0
- package/dist/arkgraph/viewer.en.css +1 -0
- package/dist/arkgraph/viewer.en.js +49 -0
- package/dist/arkgraph/viewer.en.js.LEGAL.txt +56 -0
- package/dist/arkgraph/viewer.js +49 -0
- package/dist/arkgraph/viewer.js.LEGAL.txt +56 -0
- package/docker/claude-code/Dockerfile +97 -0
- package/docker/claude-code/codex-pro-relay.mjs +466 -0
- package/docker/claude-code/runtime-contract-check.mjs +79 -0
- package/docs/arkgraph-reading.md +79 -0
- package/docs/configuration.md +100 -0
- package/docs/integration.md +92 -0
- package/docs/maturity-plan.md +27 -0
- package/docs/npm-release.md +44 -0
- package/docs/paper-reading.md +40 -0
- package/docs/research-plan-granularity.md +27 -0
- package/docs/terminal.md +49 -0
- package/examples/toy-evaluation/compile-task.json +27 -0
- package/examples/toy-evaluation/paper.md +5 -0
- package/examples/toy-evaluation/repository/README.md +9 -0
- package/examples/toy-evaluation/repository/checkpoint.json +4 -0
- package/examples/toy-evaluation/repository/evaluate.py +17 -0
- package/examples/toy-evaluation/task.json +81 -0
- package/package.json +59 -0
- package/prompts/compile-research.md +58 -0
- package/prompts/execute-contract.md +72 -0
- package/prompts/execute-workspace-simple.md +51 -0
- package/prompts/execute-workspace.md +34 -0
- package/prompts/prepare-reproduction.md +82 -0
- package/prompts/repair-research.md +45 -0
- package/protocol/CAP.md +129 -0
- package/protocol/LICENSE +12 -0
- package/protocol/MAPPINGS.md +72 -0
- package/protocol/README.md +38 -0
- package/protocol/conformance-v2.0-alpha.1.json +36 -0
- package/protocol/examples/arkgraph/checkpoint-evaluation.json +309 -0
- package/protocol/examples/arkgraph/fixtures.mjs +49 -0
- package/protocol/examples/arkgraph/paper-free.json +291 -0
- package/protocol/examples/arkgraph/partial-failure.json +344 -0
- package/protocol/examples/arkgraph/training-evaluation.json +443 -0
- package/protocol/profiles/agent-trace.md +16 -0
- package/protocol/profiles/computational-run.md +16 -0
- package/protocol/profiles/core.md +15 -0
- package/protocol/profiles/public-bundle.md +18 -0
- package/protocol/profiles/reproduction.md +29 -0
- package/protocol/profiles/research-compilation.md +44 -0
- package/protocol/profiles/research-plan.md +39 -0
- package/protocol/profiles/restricted-evidence.md +15 -0
- package/runtime/bootstrap-autodl-runtime.sh +314 -0
- package/runtime/create-runtime-venv.sh +41 -0
- package/runtime/install-local-cpu-runtime.sh +23 -0
- package/runtime/install-scientific-runtime.sh +153 -0
- package/runtime/mineru/parse.py +62 -0
- package/runtime/mineru/requirements.txt +4 -0
- package/runtime/requirements-baseline.txt +38 -0
- package/schemas/cap/v2/activity.schema.json +47 -0
- package/schemas/cap/v2/agent.schema.json +32 -0
- package/schemas/cap/v2/assertion.schema.json +110 -0
- package/schemas/cap/v2/descriptor.schema.json +243 -0
- package/schemas/cap/v2/entity.schema.json +64 -0
- package/schemas/cap/v2/manifest.schema.json +67 -0
- package/schemas/cap/v2/relation.schema.json +82 -0
- package/schemas/compute-catalog.schema.json +63 -0
- package/schemas/compute-decision.schema.json +27 -0
- package/schemas/execution-contract.schema.json +1024 -0
- package/schemas/research-card.schema.json +30 -0
- package/schemas/research-inventory-draft.schema.json +366 -0
- package/schemas/research.schema.json +1044 -0
- package/schemas/result.schema.json +173 -0
- package/schemas/verification-policy.schema.json +47 -0
- package/schemas/verified-conclusion.schema.json +58 -0
- package/schemas/workspace-summary.schema.json +24 -0
- package/scripts/build-arkgraph-view.mjs +12 -0
- package/scripts/check-execution-feasibility.mjs +24 -0
- package/scripts/check-syntax.mjs +15 -0
- package/scripts/deterministic-asset-preparation.py +438 -0
- package/scripts/package-cap.mjs +23 -0
- package/scripts/package-local-agent.mjs +23 -0
- package/scripts/preview-arkgraph.mjs +25 -0
- package/scripts/replay-research-compiler-candidate.mjs +134 -0
- package/scripts/review-compiler-sources.mjs +44 -0
- package/scripts/run-asset-preparation.sh +17 -0
- package/scripts/run-research-plan.mjs +98 -0
- package/scripts/validate-asset-preparation.py +290 -0
- package/scripts/verify-local-runtime.mjs +57 -0
- package/scripts/verify-npm-package.mjs +57 -0
- package/src/adapters/paper2agent.mjs +107 -0
- package/src/assets/cache.mjs +159 -0
- package/src/assets/compute.mjs +98 -0
- package/src/assets/executor.mjs +145 -0
- package/src/assets/lifecycle.mjs +213 -0
- package/src/assets/manifest.mjs +242 -0
- package/src/assets/opportunistic-preparation.mjs +81 -0
- package/src/assets/plan.mjs +411 -0
- package/src/assets/prompts.mjs +29 -0
- package/src/assets/public-asset-probe.mjs +525 -0
- package/src/assets/qualification.mjs +119 -0
- package/src/assets/readiness.mjs +130 -0
- package/src/assets/reproduction-admission.mjs +355 -0
- package/src/assets/requirements.mjs +152 -0
- package/src/assets/source-grounding.mjs +341 -0
- package/src/assets/source-policy.mjs +118 -0
- package/src/autodl/client.mjs +260 -0
- package/src/autodl/ssh.mjs +380 -0
- package/src/autodl/tools.mjs +129 -0
- package/src/cap/redaction.mjs +38 -0
- package/src/cap/v2/archive.mjs +152 -0
- package/src/cap/v2/attestation.mjs +204 -0
- package/src/cap/v2/canonical-json.mjs +114 -0
- package/src/cap/v2/compilation-artifact.mjs +240 -0
- package/src/cap/v2/core.mjs +282 -0
- package/src/cap/v2/measurement-assessment-records.mjs +23 -0
- package/src/cap/v2/pipeline-artifact.mjs +922 -0
- package/src/cap/v2/read.mjs +41 -0
- package/src/cap/v2/reassessment-artifact.mjs +383 -0
- package/src/cap/v2/research-artifact.mjs +231 -0
- package/src/cap/v2/research-map-records.mjs +46 -0
- package/src/cap/v2/research-object-records.mjs +163 -0
- package/src/cap/v2/research-records.mjs +187 -0
- package/src/cap/v2/verify.mjs +642 -0
- package/src/cli.mjs +1146 -0
- package/src/compute/autodl-pro-compiler.mjs +347 -0
- package/src/compute/autodl-pro-executor.mjs +459 -0
- package/src/compute/autodl-pro-job.mjs +843 -0
- package/src/compute/autodl-pro-network.mjs +295 -0
- package/src/compute/autodl-pro-remote.mjs +810 -0
- package/src/compute/autodl-pro-staging.mjs +117 -0
- package/src/compute/campaign.mjs +110 -0
- package/src/compute/catalog.mjs +123 -0
- package/src/compute/checkpoint-protocol.mjs +154 -0
- package/src/compute/codex-account-lock.mjs +111 -0
- package/src/compute/codex-account-session.mjs +107 -0
- package/src/compute/compiler-profile.mjs +38 -0
- package/src/compute/compiler-router.mjs +23 -0
- package/src/compute/coordinator-recovery.mjs +210 -0
- package/src/compute/executor-router.mjs +29 -0
- package/src/compute/gcp-batch-compiler.mjs +685 -0
- package/src/compute/gcp-batch-executor.mjs +1215 -0
- package/src/compute/gcp-batch-failure.mjs +92 -0
- package/src/compute/gcp-batch-job.mjs +527 -0
- package/src/compute/gcp-batch-lifecycle.mjs +81 -0
- package/src/compute/gcp-checkpoint-worker.mjs +1633 -0
- package/src/compute/local-codex-compiler.mjs +52 -0
- package/src/compute/measurement-hardware.mjs +128 -0
- package/src/compute/remote-attempt.mjs +226 -0
- package/src/compute/requirements.mjs +124 -0
- package/src/compute/research-phases.mjs +48 -0
- package/src/compute/scheduler.mjs +452 -0
- package/src/compute/shared-workloads.mjs +26 -0
- package/src/compute/stage-archive.mjs +79 -0
- package/src/contracts/campaign-contract.mjs +52 -0
- package/src/contracts/execution-contract.mjs +819 -0
- package/src/contracts/execution-mode.mjs +19 -0
- package/src/contracts/execution-timeouts.mjs +45 -0
- package/src/contracts/execution-workload.mjs +68 -0
- package/src/contracts/preflight-schema.mjs +25 -0
- package/src/contracts/public-contract.mjs +63 -0
- package/src/contracts/subject-tags.mjs +31 -0
- package/src/dashboard/data.mjs +898 -0
- package/src/dashboard/server.mjs +79 -0
- package/src/dashboard/static/dashboard.css +366 -0
- package/src/dashboard/static/dashboard.js +560 -0
- package/src/dashboard/static/index.html +85 -0
- package/src/deployment/community-policy.mjs +9 -0
- package/src/deployment/environment.mjs +112 -0
- package/src/deployment/guided.mjs +98 -0
- package/src/deployment/handoff.mjs +102 -0
- package/src/deployment/local-contract.mjs +31 -0
- package/src/deployment/local.mjs +100 -0
- package/src/deployment/prepare.mjs +46 -0
- package/src/deployment/recipe.mjs +108 -0
- package/src/deployment/supplement.mjs +51 -0
- package/src/deployment/terminal.mjs +43 -0
- package/src/diagnosis/renderer.mjs +75 -0
- package/src/diagnosis/target-failure.mjs +46 -0
- package/src/evidence/parser-registry.mjs +54 -0
- package/src/evidence/parsers/fasttext-classification.mjs +82 -0
- package/src/evidence/parsers/json-scalar.mjs +96 -0
- package/src/evidence/parsers/simcse-senteval.mjs +104 -0
- package/src/evidence/parsers/starspace-classification.mjs +78 -0
- package/src/evidence/registry.mjs +147 -0
- package/src/execution/runner-audit.mjs +473 -0
- package/src/gcp/auth.mjs +106 -0
- package/src/gcp/batch-client.mjs +120 -0
- package/src/gcp/resource-discovery.mjs +177 -0
- package/src/gcp/rest.mjs +82 -0
- package/src/gcp/secret-manager.mjs +34 -0
- package/src/gcp/signed-url.mjs +133 -0
- package/src/gcp/storage.mjs +220 -0
- package/src/graph/command.mjs +41 -0
- package/src/graph/execution.mjs +97 -0
- package/src/graph/model.mjs +37 -0
- package/src/graph/presentation.mjs +110 -0
- package/src/graph/query.mjs +159 -0
- package/src/graph/research-relations.mjs +69 -0
- package/src/graph/source-page.mjs +12 -0
- package/src/graph/source-preview.mjs +34 -0
- package/src/graph/validate.mjs +76 -0
- package/src/job.mjs +496 -0
- package/src/network/autodl-routing-proxy.mjs +462 -0
- package/src/network/egress-proxy.mjs +158 -0
- package/src/observability/event-contract.mjs +230 -0
- package/src/observability/pipeline-monitor.mjs +166 -0
- package/src/pipeline/orchestrator.mjs +1281 -0
- package/src/pipeline/recovery-error.mjs +11 -0
- package/src/pipeline/replay.mjs +304 -0
- package/src/pipeline/shared-execution.mjs +115 -0
- package/src/pipeline/stage-checkpoint.mjs +86 -0
- package/src/pipeline/stage-recovery.mjs +101 -0
- package/src/pipeline/targets.mjs +110 -0
- package/src/process.mjs +143 -0
- package/src/protocol.mjs +312 -0
- package/src/provider/codex-account.mjs +44 -0
- package/src/provider/codex-completion.mjs +49 -0
- package/src/provider/completion.mjs +292 -0
- package/src/provider/model-client.mjs +44 -0
- package/src/provider/model-route.mjs +29 -0
- package/src/provider/openrouter-readiness.mjs +189 -0
- package/src/provider/reader-bridge.mjs +35 -0
- package/src/provider/relay.mjs +263 -0
- package/src/provider/runtime-auth.mjs +40 -0
- package/src/public/cap.d.mts +90 -0
- package/src/public/cap.mjs +12 -0
- package/src/public/contracts.d.mts +2 -0
- package/src/public/host.mjs +171 -0
- package/src/public/operations.d.mts +11 -0
- package/src/public/presentation.d.mts +4 -0
- package/src/records/views.mjs +26 -0
- package/src/remote/command.mjs +178 -0
- package/src/remote/ssh.mjs +59 -0
- package/src/repository-origin.mjs +81 -0
- package/src/reproduction/evidence-feedback.mjs +96 -0
- package/src/reproduction/incomplete-initialization.mjs +25 -0
- package/src/reproduction/lifecycle.mjs +253 -0
- package/src/reproduction/plan.mjs +132 -0
- package/src/reproduction/prompts.mjs +70 -0
- package/src/reproduction/runner.mjs +188 -0
- package/src/reproduction/summary.mjs +130 -0
- package/src/reproduction/workspace-mode.mjs +7 -0
- package/src/research/automatic-admission.mjs +156 -0
- package/src/research/compiler-coverage.mjs +85 -0
- package/src/research/compiler-failure.mjs +24 -0
- package/src/research/compiler-normalization-guards.mjs +112 -0
- package/src/research/compiler-repair.mjs +3 -0
- package/src/research/compiler.mjs +853 -0
- package/src/research/continuation-selection.mjs +26 -0
- package/src/research/execution-graph-context.mjs +43 -0
- package/src/research/experiment-importance.mjs +15 -0
- package/src/research/inventory-handoff.mjs +104 -0
- package/src/research/inventory-revisions.mjs +32 -0
- package/src/research/mineru-local.mjs +73 -0
- package/src/research/paper-command.mjs +19 -0
- package/src/research/paper-markdown.mjs +180 -0
- package/src/research/paper-source-map.mjs +69 -0
- package/src/research/planning-policy.mjs +88 -0
- package/src/research/reference-materials.mjs +11 -0
- package/src/research/reproduction-scope.mjs +30 -0
- package/src/research/research-map.mjs +94 -0
- package/src/research/research-objects.mjs +88 -0
- package/src/research/source-discovery.mjs +646 -0
- package/src/research/source-observations.mjs +75 -0
- package/src/research/source-review-cli-mcp.mjs +26 -0
- package/src/research/source-review-input.mjs +209 -0
- package/src/research/source-review-local-codex.mjs +36 -0
- package/src/research/source-review-model.mjs +70 -0
- package/src/research/source-review.mjs +173 -0
- package/src/research/structure.mjs +3163 -0
- package/src/research-card/renderer.mjs +277 -0
- package/src/research-card/verified-conclusion.mjs +143 -0
- package/src/results/output-registry.mjs +183 -0
- package/src/runtime/claude-code.mjs +52 -0
- package/src/runtime/codex-capacity-retry.mjs +87 -0
- package/src/runtime/codex.mjs +64 -0
- package/src/runtime/config.mjs +157 -0
- package/src/runtime/final-output.mjs +40 -0
- package/src/runtime/index.mjs +21 -0
- package/src/runtime/local-codex.mjs +74 -0
- package/src/runtime/opencode.mjs +95 -0
- package/src/runtime/prompt.mjs +13 -0
- package/src/sandbox/docker.mjs +363 -0
- package/src/settings/command.mjs +297 -0
- package/src/settings/store.mjs +119 -0
- package/src/telemetry/pricing.mjs +68 -0
- package/src/telemetry/usage.mjs +265 -0
- package/src/terminal/events.mjs +97 -0
- package/src/terminal/input.mjs +40 -0
- package/src/terminal/plain.mjs +40 -0
- package/src/terminal/remote-stream.mjs +22 -0
- package/src/terminal/screen.mjs +214 -0
- package/src/terminal/transcript.mjs +69 -0
- package/src/util.mjs +107 -0
- package/src/verification/ai-assessor.mjs +534 -0
- package/src/verification/claim-evaluator.mjs +242 -0
- package/src/verification/evidence-context.mjs +165 -0
- package/src/verification/evidence-reader.mjs +95 -0
- package/src/verification/integrity.mjs +570 -0
- package/src/verification/tolerance.mjs +32 -0
- package/src/workloads/cpu-research-preparation.mjs +56 -0
- package/src/workloads/definition.mjs +74 -0
- package/src/workloads/phase-aware-reproduction.mjs +46 -0
- package/src/workloads/reproduction.mjs +85 -0
- package/src/workspace/command.mjs +242 -0
- package/src/workspace/control.mjs +49 -0
- package/src/workspace/entry.mjs +28 -0
- package/src/workspace/input.mjs +93 -0
- package/src/workspace/interactive.mjs +94 -0
- package/src/workspace/jobs.mjs +418 -0
- package/src/workspace/session.mjs +97 -0
- package/src/workspace/worker.mjs +137 -0
- package/ui/arkgraph/ambient-motion.mjs +10 -0
- package/ui/arkgraph/app.jsx +153 -0
- package/ui/arkgraph/boot.js +6 -0
- package/ui/arkgraph/camera-motion.mjs +20 -0
- package/ui/arkgraph/context-reveal.mjs +39 -0
- package/ui/arkgraph/details.css +3 -0
- package/ui/arkgraph/entry.jsx +28 -0
- package/ui/arkgraph/experiment-curves.mjs +17 -0
- package/ui/arkgraph/experiment-selection.mjs +15 -0
- package/ui/arkgraph/experiment-style.css +26 -0
- package/ui/arkgraph/experiment-ui.jsx +32 -0
- package/ui/arkgraph/frame.html +1 -0
- package/ui/arkgraph/graph-gestures.mjs +62 -0
- package/ui/arkgraph/label-layout.mjs +57 -0
- package/ui/arkgraph/locales/en.json +229 -0
- package/ui/arkgraph/locales/source-types.json +15 -0
- package/ui/arkgraph/localization-build.mjs +27 -0
- package/ui/arkgraph/material-build.mjs +23 -0
- package/ui/arkgraph/material-colors.mjs +39 -0
- package/ui/arkgraph/material-style.css +15 -0
- package/ui/arkgraph/open-graph.jsx +326 -0
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- package/ui/arkgraph/reading-layout.mjs +130 -0
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- package/ui/arkgraph/record-detail.css +51 -0
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- package/ui/arkgraph/research-types.mjs +31 -0
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- package/ui/arkgraph/soft-spine.mjs +26 -0
- package/ui/arkgraph/steering-style.css +187 -0
- package/ui/arkgraph/style.css +272 -0
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