@cirrobio/api-client 0.0.26-alpha → 0.0.28-alpha

package/src/models/CustomProcessRequestPipelineCode.ts

@@ -0,0 +1,97 @@
+/* tslint:disable */
+/* eslint-disable */
+/**
+ * Cirro Data
+ * Cirro Data Platform service API
+ *
+ * The version of the OpenAPI document: latest
+ * Contact: support@cirro.bio
+ *
+ * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
+ * https://openapi-generator.tech
+ * Do not edit the class manually.
+ */
+
+import { exists, mapValues } from '../runtime';
+import type { RepositoryType } from './RepositoryType';
+import {
+    RepositoryTypeFromJSON,
+    RepositoryTypeFromJSONTyped,
+    RepositoryTypeToJSON,
+} from './RepositoryType';
+
+/**
+ * 
+ * @export
+ * @interface CustomProcessRequestPipelineCode
+ */
+export interface CustomProcessRequestPipelineCode {
+    /**
+     * GitHub repository which contains the workflow code
+     * @type {string}
+     * @memberof CustomProcessRequestPipelineCode
+     */
+    repositoryPath: string;
+    /**
+     * Branch, tag, or commit hash of the pipeline code
+     * @type {string}
+     * @memberof CustomProcessRequestPipelineCode
+     */
+    version?: string;
+    /**
+     * 
+     * @type {RepositoryType}
+     * @memberof CustomProcessRequestPipelineCode
+     */
+    repositoryType?: RepositoryType;
+    /**
+     * Main script for running the pipeline
+     * @type {string}
+     * @memberof CustomProcessRequestPipelineCode
+     */
+    entryPoint?: string;
+}
+
+/**
+ * Check if a given object implements the CustomProcessRequestPipelineCode interface.
+ */
+export function instanceOfCustomProcessRequestPipelineCode(value: object): boolean {
+    let isInstance = true;
+    isInstance = isInstance && "repositoryPath" in value;
+
+    return isInstance;
+}
+
+export function CustomProcessRequestPipelineCodeFromJSON(json: any): CustomProcessRequestPipelineCode {
+    return CustomProcessRequestPipelineCodeFromJSONTyped(json, false);
+}
+
+export function CustomProcessRequestPipelineCodeFromJSONTyped(json: any, ignoreDiscriminator: boolean): CustomProcessRequestPipelineCode {
+    if ((json === undefined) || (json === null)) {
+        return json;
+    }
+    return {
+        
+        'repositoryPath': json['repositoryPath'],
+        'version': !exists(json, 'version') ? undefined : json['version'],
+        'repositoryType': !exists(json, 'repositoryType') ? undefined : RepositoryTypeFromJSON(json['repositoryType']),
+        'entryPoint': !exists(json, 'entryPoint') ? undefined : json['entryPoint'],
+    };
+}
+
+export function CustomProcessRequestPipelineCodeToJSON(value?: CustomProcessRequestPipelineCode | null): any {
+    if (value === undefined) {
+        return undefined;
+    }
+    if (value === null) {
+        return null;
+    }
+    return {
+        
+        'repositoryPath': value.repositoryPath,
+        'version': value.version,
+        'repositoryType': RepositoryTypeToJSON(value.repositoryType),
+        'entryPoint': value.entryPoint,
+    };
+}
+

package/src/models/FileNamePattern.ts

@@ -31,12 +31,6 @@ export interface FileNamePattern {
      * @memberof FileNamePattern
      */
     description: string;
-    /**
-     * 
-     * @type {string}
-     * @memberof FileNamePattern
-     */
-    sampleMatchingPattern: string;
 }
 
 /**
@@ -46,7 +40,6 @@ export function instanceOfFileNamePattern(value: object): boolean {
     let isInstance = true;
     isInstance = isInstance && "exampleName" in value;
     isInstance = isInstance && "description" in value;
-    isInstance = isInstance && "sampleMatchingPattern" in value;
 
     return isInstance;
 }
@@ -63,7 +56,6 @@ export function FileNamePatternFromJSONTyped(json: any, ignoreDiscriminator: boo
         
         'exampleName': json['exampleName'],
         'description': json['description'],
-        'sampleMatchingPattern': json['sampleMatchingPattern'],
     };
 }
 
@@ -78,7 +70,6 @@ export function FileNamePatternToJSON(value?: FileNamePattern | null): any {
         
         'exampleName': value.exampleName,
         'description': value.description,
-        'sampleMatchingPattern': value.sampleMatchingPattern,
     };
 }
 

package/src/models/{ValidateDataInputsResponse.ts → FileRequirements.ts}

@@ -23,33 +23,33 @@ import {
 /**
  * 
  * @export
- * @interface ValidateDataInputsResponse
+ * @interface FileRequirements
  */
-export interface ValidateDataInputsResponse {
+export interface FileRequirements {
     /**
      * 
      * @type {Array<string>}
-     * @memberof ValidateDataInputsResponse
+     * @memberof FileRequirements
      */
     files: Array<string>;
     /**
      * 
      * @type {string}
-     * @memberof ValidateDataInputsResponse
+     * @memberof FileRequirements
      */
     errorMsg: string;
     /**
      * 
      * @type {Array<AllowedDataType>}
-     * @memberof ValidateDataInputsResponse
+     * @memberof FileRequirements
      */
     allowedDataTypes: Array<AllowedDataType>;
 }
 
 /**
- * Check if a given object implements the ValidateDataInputsResponse interface.
+ * Check if a given object implements the FileRequirements interface.
  */
-export function instanceOfValidateDataInputsResponse(value: object): boolean {
+export function instanceOfFileRequirements(value: object): boolean {
     let isInstance = true;
     isInstance = isInstance && "files" in value;
     isInstance = isInstance && "errorMsg" in value;
@@ -58,11 +58,11 @@ export function instanceOfValidateDataInputsResponse(value: object): boolean {
     return isInstance;
 }
 
-export function ValidateDataInputsResponseFromJSON(json: any): ValidateDataInputsResponse {
-    return ValidateDataInputsResponseFromJSONTyped(json, false);
+export function FileRequirementsFromJSON(json: any): FileRequirements {
+    return FileRequirementsFromJSONTyped(json, false);
 }
 
-export function ValidateDataInputsResponseFromJSONTyped(json: any, ignoreDiscriminator: boolean): ValidateDataInputsResponse {
+export function FileRequirementsFromJSONTyped(json: any, ignoreDiscriminator: boolean): FileRequirements {
     if ((json === undefined) || (json === null)) {
         return json;
     }
@@ -74,7 +74,7 @@ export function ValidateDataInputsResponseFromJSONTyped(json: any, ignoreDiscrim
     };
 }
 
-export function ValidateDataInputsResponseToJSON(value?: ValidateDataInputsResponse | null): any {
+export function FileRequirementsToJSON(value?: FileRequirements | null): any {
     if (value === undefined) {
         return undefined;
     }

package/src/models/GenerateSftpCredentialsRequest.ts

@@ -20,11 +20,11 @@ import { exists, mapValues } from '../runtime';
  */
 export interface GenerateSftpCredentialsRequest {
     /**
-     * 
+     * Number of days the credentials are valid for
      * @type {number}
      * @memberof GenerateSftpCredentialsRequest
      */
-    lifetimeDays: number;
+    lifetimeDays?: number;
 }
 
 /**
@@ -32,7 +32,6 @@ export interface GenerateSftpCredentialsRequest {
  */
 export function instanceOfGenerateSftpCredentialsRequest(value: object): boolean {
     let isInstance = true;
-    isInstance = isInstance && "lifetimeDays" in value;
 
     return isInstance;
 }
@@ -47,7 +46,7 @@ export function GenerateSftpCredentialsRequestFromJSONTyped(json: any, ignoreDis
     }
     return {
         
-        'lifetimeDays': json['lifetimeDays'],
+        'lifetimeDays': !exists(json, 'lifetimeDays') ? undefined : json['lifetimeDays'],
     };
 }
 

package/src/models/PipelineCode.ts

@@ -0,0 +1,97 @@
+/* tslint:disable */
+/* eslint-disable */
+/**
+ * Cirro Data
+ * Cirro Data Platform service API
+ *
+ * The version of the OpenAPI document: latest
+ * Contact: support@cirro.bio
+ *
+ * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
+ * https://openapi-generator.tech
+ * Do not edit the class manually.
+ */
+
+import { exists, mapValues } from '../runtime';
+import type { RepositoryType } from './RepositoryType';
+import {
+    RepositoryTypeFromJSON,
+    RepositoryTypeFromJSONTyped,
+    RepositoryTypeToJSON,
+} from './RepositoryType';
+
+/**
+ * Used to describe the pipeline analysis code
+ * @export
+ * @interface PipelineCode
+ */
+export interface PipelineCode {
+    /**
+     * GitHub repository which contains the workflow code
+     * @type {string}
+     * @memberof PipelineCode
+     */
+    repositoryPath: string;
+    /**
+     * Branch, tag, or commit hash of the pipeline code
+     * @type {string}
+     * @memberof PipelineCode
+     */
+    version?: string;
+    /**
+     * 
+     * @type {RepositoryType}
+     * @memberof PipelineCode
+     */
+    repositoryType?: RepositoryType;
+    /**
+     * Main script for running the pipeline
+     * @type {string}
+     * @memberof PipelineCode
+     */
+    entryPoint?: string;
+}
+
+/**
+ * Check if a given object implements the PipelineCode interface.
+ */
+export function instanceOfPipelineCode(value: object): boolean {
+    let isInstance = true;
+    isInstance = isInstance && "repositoryPath" in value;
+
+    return isInstance;
+}
+
+export function PipelineCodeFromJSON(json: any): PipelineCode {
+    return PipelineCodeFromJSONTyped(json, false);
+}
+
+export function PipelineCodeFromJSONTyped(json: any, ignoreDiscriminator: boolean): PipelineCode {
+    if ((json === undefined) || (json === null)) {
+        return json;
+    }
+    return {
+        
+        'repositoryPath': json['repositoryPath'],
+        'version': !exists(json, 'version') ? undefined : json['version'],
+        'repositoryType': !exists(json, 'repositoryType') ? undefined : RepositoryTypeFromJSON(json['repositoryType']),
+        'entryPoint': !exists(json, 'entryPoint') ? undefined : json['entryPoint'],
+    };
+}
+
+export function PipelineCodeToJSON(value?: PipelineCode | null): any {
+    if (value === undefined) {
+        return undefined;
+    }
+    if (value === null) {
+        return null;
+    }
+    return {
+        
+        'repositoryPath': value.repositoryPath,
+        'version': value.version,
+        'repositoryType': RepositoryTypeToJSON(value.repositoryType),
+        'entryPoint': value.entryPoint,
+    };
+}
+

package/src/models/ProcessDetail.ts

@@ -33,7 +33,7 @@ import {
  */
 export interface ProcessDetail {
     /**
-     * Unique ID of the Process
+     * 
      * @type {string}
      * @memberof ProcessDetail
      */

package/src/models/RepositoryType.ts

@@ -0,0 +1,39 @@
+/* tslint:disable */
+/* eslint-disable */
+/**
+ * Cirro Data
+ * Cirro Data Platform service API
+ *
+ * The version of the OpenAPI document: latest
+ * Contact: support@cirro.bio
+ *
+ * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
+ * https://openapi-generator.tech
+ * Do not edit the class manually.
+ */
+
+/**
+ * Type of repository
+ * @export
+ * @enum {string}
+ */
+export enum RepositoryType {
+    None = 'NONE',
+    Aws = 'AWS',
+    GithubPublic = 'GITHUB_PUBLIC',
+    GithubPrivate = 'GITHUB_PRIVATE'
+}
+
+
+export function RepositoryTypeFromJSON(json: any): RepositoryType {
+    return RepositoryTypeFromJSONTyped(json, false);
+}
+
+export function RepositoryTypeFromJSONTyped(json: any, ignoreDiscriminator: boolean): RepositoryType {
+    return json as RepositoryType;
+}
+
+export function RepositoryTypeToJSON(value?: RepositoryType | null): any {
+    return value as any;
+}
+

package/src/models/{ValidateDataInputsRequest.ts → ValidateFileRequirementsRequest.ts}

@@ -16,27 +16,27 @@ import { exists, mapValues } from '../runtime';
 /**
  * 
  * @export
- * @interface ValidateDataInputsRequest
+ * @interface ValidateFileRequirementsRequest
  */
-export interface ValidateDataInputsRequest {
+export interface ValidateFileRequirementsRequest {
     /**
      * 
      * @type {string}
-     * @memberof ValidateDataInputsRequest
+     * @memberof ValidateFileRequirementsRequest
      */
     sampleSheet: string;
     /**
      * 
      * @type {Array<string>}
-     * @memberof ValidateDataInputsRequest
+     * @memberof ValidateFileRequirementsRequest
      */
     fileNames: Array<string>;
 }
 
 /**
- * Check if a given object implements the ValidateDataInputsRequest interface.
+ * Check if a given object implements the ValidateFileRequirementsRequest interface.
  */
-export function instanceOfValidateDataInputsRequest(value: object): boolean {
+export function instanceOfValidateFileRequirementsRequest(value: object): boolean {
     let isInstance = true;
     isInstance = isInstance && "sampleSheet" in value;
     isInstance = isInstance && "fileNames" in value;
@@ -44,11 +44,11 @@ export function instanceOfValidateDataInputsRequest(value: object): boolean {
     return isInstance;
 }
 
-export function ValidateDataInputsRequestFromJSON(json: any): ValidateDataInputsRequest {
-    return ValidateDataInputsRequestFromJSONTyped(json, false);
+export function ValidateFileRequirementsRequestFromJSON(json: any): ValidateFileRequirementsRequest {
+    return ValidateFileRequirementsRequestFromJSONTyped(json, false);
 }
 
-export function ValidateDataInputsRequestFromJSONTyped(json: any, ignoreDiscriminator: boolean): ValidateDataInputsRequest {
+export function ValidateFileRequirementsRequestFromJSONTyped(json: any, ignoreDiscriminator: boolean): ValidateFileRequirementsRequest {
     if ((json === undefined) || (json === null)) {
         return json;
     }
@@ -59,7 +59,7 @@ export function ValidateDataInputsRequestFromJSONTyped(json: any, ignoreDiscrimi
     };
 }
 
-export function ValidateDataInputsRequestToJSON(value?: ValidateDataInputsRequest | null): any {
+export function ValidateFileRequirementsRequestToJSON(value?: ValidateFileRequirementsRequest | null): any {
     if (value === undefined) {
         return undefined;
     }

package/src/models/index.ts

@@ -10,6 +10,9 @@ export * from './Contact';
 export * from './CreateNotebookInstanceRequest';
 export * from './CreateResponse';
 export * from './CustomPipelineSettings';
+export * from './CustomPipelineSettingsDto1';
+export * from './CustomProcessRequest';
+export * from './CustomProcessRequestPipelineCode';
 export * from './CustomerType';
 export * from './Dashboard';
 export * from './DashboardRequest';
@@ -20,6 +23,7 @@ export * from './DatasetFile';
 export * from './DatasetViz';
 export * from './Executor';
 export * from './FileNamePattern';
+export * from './FileRequirements';
 export * from './FormSchema';
 export * from './GenerateSftpCredentialsRequest';
 export * from './GetExecutionLogsResponse';
@@ -33,6 +37,7 @@ export * from './NotebookInstanceStatusResponse';
 export * from './OpenNotebookInstanceResponse';
 export * from './PaginatedResponseDatasetListDto';
 export * from './PaginatedResponseSampleDto';
+export * from './PipelineCode';
 export * from './Process';
 export * from './ProcessDetail';
 export * from './Project';
@@ -44,6 +49,7 @@ export * from './ProjectSettings';
 export * from './ProjectUser';
 export * from './Reference';
 export * from './ReferenceType';
+export * from './RepositoryType';
 export * from './RunAnalysisRequest';
 export * from './S3Credentials';
 export * from './Sample';
@@ -61,5 +67,4 @@ export * from './UpdateUserRequest';
 export * from './UploadDatasetCreateResponse';
 export * from './UploadDatasetRequest';
 export * from './User';
-export * from './ValidateDataInputsRequest';
-export * from './ValidateDataInputsResponse';
+export * from './ValidateFileRequirementsRequest';