@cirrobio/api-client 0.0.21-alpha → 0.0.23-alpha

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -55,6 +55,7 @@ src/models/ProjectSettings.ts
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  src/models/ProjectUser.ts
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  src/models/Reference.ts
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  src/models/ReferenceType.ts
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+ src/models/RunAnalysisRequest.ts
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  src/models/Sample.ts
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  src/models/SampleRequest.ts
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  src/models/ServiceConnection.ts
package/README.md CHANGED
@@ -36,7 +36,7 @@ navigate to the folder of your consuming project and run one of the following co
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  _published:_
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  ```
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- npm install @cirrobio/api-client@0.0.21-alpha --save
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+ npm install @cirrobio/api-client@0.0.23-alpha --save
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  ```
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  _unPublished (not recommended):_
@@ -32,15 +32,27 @@ export interface ImportPublicDatasetRequest {
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  projectId: string;
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  importDataRequest: ImportDataRequest;
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  }
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- export interface RegisterDatasetRequest {
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+ export interface IngestSamplesRequest {
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  projectId: string;
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- uploadDatasetRequest: UploadDatasetRequest;
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+ datasetId: string;
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+ }
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+ export interface RegenerateManifestRequest {
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+ projectId: string;
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+ datasetId: string;
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+ }
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+ export interface RerunTransformRequest {
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+ projectId: string;
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+ datasetId: string;
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  }
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  export interface UpdateDatasetOperationRequest {
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  projectId: string;
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  datasetId: string;
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  updateDatasetRequest: UpdateDatasetRequest;
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  }
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+ export interface UploadDatasetOperationRequest {
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+ projectId: string;
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+ uploadDatasetRequest: UploadDatasetRequest;
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+ }
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  /**
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  *
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  */
@@ -96,15 +108,35 @@ export declare class DatasetsApi extends runtime.BaseAPI {
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  */
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  importPublicDataset(requestParameters: ImportPublicDatasetRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<CreateResponse>;
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  /**
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- * Registers a dataset in the system that you upload files into
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- * Upload private dataset
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+ * Rerun sample ingest (TODO).
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+ * Rerun sample ingest
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  */
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- registerDatasetRaw(requestParameters: RegisterDatasetRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<UploadDatasetCreateResponse>>;
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+ ingestSamplesRaw(requestParameters: IngestSamplesRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<void>>;
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  /**
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- * Registers a dataset in the system that you upload files into
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- * Upload private dataset
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+ * Rerun sample ingest (TODO).
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+ * Rerun sample ingest
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  */
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- registerDataset(requestParameters: RegisterDatasetRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<UploadDatasetCreateResponse>;
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+ ingestSamples(requestParameters: IngestSamplesRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<void>;
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+ /**
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+ * Regenerate dataset manifest (TODO).
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+ * Regenerate dataset manifest
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+ */
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+ regenerateManifestRaw(requestParameters: RegenerateManifestRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<void>>;
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+ /**
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+ * Regenerate dataset manifest (TODO).
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+ * Regenerate dataset manifest
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+ */
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+ regenerateManifest(requestParameters: RegenerateManifestRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<void>;
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+ /**
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+ * Rerun data transforms (TODO).
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+ * Rerun data transforms
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+ */
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+ rerunTransformRaw(requestParameters: RerunTransformRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<void>>;
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+ /**
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+ * Rerun data transforms (TODO).
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+ * Rerun data transforms
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+ */
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+ rerunTransform(requestParameters: RerunTransformRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<void>;
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  /**
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  * Update info on a dataset
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  * Update dataset
@@ -115,4 +147,14 @@ export declare class DatasetsApi extends runtime.BaseAPI {
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  * Update dataset
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  */
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  updateDataset(requestParameters: UpdateDatasetOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<DatasetDetail>;
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+ /**
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+ * Registers a dataset in the system that you upload files into
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+ * Upload private dataset
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+ */
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+ uploadDatasetRaw(requestParameters: UploadDatasetOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<UploadDatasetCreateResponse>>;
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+ /**
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+ * Registers a dataset in the system that you upload files into
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+ * Upload private dataset
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+ */
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+ uploadDataset(requestParameters: UploadDatasetOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<UploadDatasetCreateResponse>;
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  }
@@ -377,24 +377,23 @@ var DatasetsApi = /** @class */ (function (_super) {
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  });
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  };
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  /**
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- * Registers a dataset in the system that you upload files into
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- * Upload private dataset
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+ * Rerun sample ingest (TODO).
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+ * Rerun sample ingest
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  */
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- DatasetsApi.prototype.registerDatasetRaw = function (requestParameters, initOverrides) {
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+ DatasetsApi.prototype.ingestSamplesRaw = function (requestParameters, initOverrides) {
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  return __awaiter(this, void 0, void 0, function () {
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  var queryParameters, headerParameters, token, tokenString, response;
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  return __generator(this, function (_a) {
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  switch (_a.label) {
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  case 0:
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  if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
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- throw new runtime.RequiredError('projectId', 'Required parameter requestParameters.projectId was null or undefined when calling registerDataset.');
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+ throw new runtime.RequiredError('projectId', 'Required parameter requestParameters.projectId was null or undefined when calling ingestSamples.');
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  }
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- if (requestParameters.uploadDatasetRequest === null || requestParameters.uploadDatasetRequest === undefined) {
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- throw new runtime.RequiredError('uploadDatasetRequest', 'Required parameter requestParameters.uploadDatasetRequest was null or undefined when calling registerDataset.');
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+ if (requestParameters.datasetId === null || requestParameters.datasetId === undefined) {
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+ throw new runtime.RequiredError('datasetId', 'Required parameter requestParameters.datasetId was null or undefined when calling ingestSamples.');
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  }
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  queryParameters = {};
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  headerParameters = {};
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- headerParameters['Content-Type'] = 'application/json';
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  if (!(this.configuration && this.configuration.accessToken)) return [3 /*break*/, 2];
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  token = this.configuration.accessToken;
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  return [4 /*yield*/, token("accessToken", [])];
@@ -405,33 +404,142 @@ var DatasetsApi = /** @class */ (function (_super) {
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  }
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  _a.label = 2;
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  case 2: return [4 /*yield*/, this.request({
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- path: "/projects/{projectId}/datasets/upload".replace("{".concat("projectId", "}"), encodeURIComponent(String(requestParameters.projectId))),
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- method: 'POST',
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+ path: "/projects/{projectId}/datasets/{datasetId}/ingest-samples".replace("{".concat("projectId", "}"), encodeURIComponent(String(requestParameters.projectId))).replace("{".concat("datasetId", "}"), encodeURIComponent(String(requestParameters.datasetId))),
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+ method: 'PUT',
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  headers: headerParameters,
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  query: queryParameters,
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- body: (0, index_1.UploadDatasetRequestToJSON)(requestParameters.uploadDatasetRequest),
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  }, initOverrides)];
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  case 3:
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  response = _a.sent();
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- return [2 /*return*/, new runtime.JSONApiResponse(response, function (jsonValue) { return (0, index_1.UploadDatasetCreateResponseFromJSON)(jsonValue); })];
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+ return [2 /*return*/, new runtime.VoidApiResponse(response)];
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  }
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  });
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  });
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  };
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  /**
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- * Registers a dataset in the system that you upload files into
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- * Upload private dataset
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+ * Rerun sample ingest (TODO).
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+ * Rerun sample ingest
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  */
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- DatasetsApi.prototype.registerDataset = function (requestParameters, initOverrides) {
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+ DatasetsApi.prototype.ingestSamples = function (requestParameters, initOverrides) {
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  return __awaiter(this, void 0, void 0, function () {
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- var response;
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  return __generator(this, function (_a) {
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  switch (_a.label) {
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- case 0: return [4 /*yield*/, this.registerDatasetRaw(requestParameters, initOverrides)];
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+ case 0: return [4 /*yield*/, this.ingestSamplesRaw(requestParameters, initOverrides)];
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+ case 1:
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+ _a.sent();
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+ return [2 /*return*/];
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+ }
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+ });
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+ });
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+ };
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+ /**
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+ * Regenerate dataset manifest (TODO).
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+ * Regenerate dataset manifest
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+ */
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+ DatasetsApi.prototype.regenerateManifestRaw = function (requestParameters, initOverrides) {
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+ return __awaiter(this, void 0, void 0, function () {
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+ var queryParameters, headerParameters, token, tokenString, response;
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+ return __generator(this, function (_a) {
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+ switch (_a.label) {
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+ case 0:
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+ if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
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+ throw new runtime.RequiredError('projectId', 'Required parameter requestParameters.projectId was null or undefined when calling regenerateManifest.');
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+ }
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+ if (requestParameters.datasetId === null || requestParameters.datasetId === undefined) {
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+ throw new runtime.RequiredError('datasetId', 'Required parameter requestParameters.datasetId was null or undefined when calling regenerateManifest.');
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+ }
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+ queryParameters = {};
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+ headerParameters = {};
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+ if (!(this.configuration && this.configuration.accessToken)) return [3 /*break*/, 2];
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+ token = this.configuration.accessToken;
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+ return [4 /*yield*/, token("accessToken", [])];
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  case 1:
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+ tokenString = _a.sent();
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+ if (tokenString) {
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+ headerParameters["Authorization"] = "Bearer ".concat(tokenString);
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+ }
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+ _a.label = 2;
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+ case 2: return [4 /*yield*/, this.request({
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+ path: "/projects/{projectId}/datasets/{datasetId}/regenerate-manifest".replace("{".concat("projectId", "}"), encodeURIComponent(String(requestParameters.projectId))).replace("{".concat("datasetId", "}"), encodeURIComponent(String(requestParameters.datasetId))),
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+ method: 'PUT',
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+ headers: headerParameters,
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+ query: queryParameters,
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+ }, initOverrides)];
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+ case 3:
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  response = _a.sent();
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- return [4 /*yield*/, response.value()];
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- case 2: return [2 /*return*/, _a.sent()];
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+ return [2 /*return*/, new runtime.VoidApiResponse(response)];
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+ }
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+ });
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+ });
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+ };
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+ /**
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+ * Regenerate dataset manifest (TODO).
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+ * Regenerate dataset manifest
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+ */
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+ DatasetsApi.prototype.regenerateManifest = function (requestParameters, initOverrides) {
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+ return __awaiter(this, void 0, void 0, function () {
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+ return __generator(this, function (_a) {
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+ switch (_a.label) {
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+ case 0: return [4 /*yield*/, this.regenerateManifestRaw(requestParameters, initOverrides)];
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+ case 1:
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+ _a.sent();
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+ return [2 /*return*/];
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+ }
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+ });
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+ });
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+ };
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+ /**
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+ * Rerun data transforms (TODO).
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+ * Rerun data transforms
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+ */
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+ DatasetsApi.prototype.rerunTransformRaw = function (requestParameters, initOverrides) {
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+ return __awaiter(this, void 0, void 0, function () {
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+ var queryParameters, headerParameters, token, tokenString, response;
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+ return __generator(this, function (_a) {
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+ switch (_a.label) {
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+ case 0:
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+ if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
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+ throw new runtime.RequiredError('projectId', 'Required parameter requestParameters.projectId was null or undefined when calling rerunTransform.');
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+ }
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+ if (requestParameters.datasetId === null || requestParameters.datasetId === undefined) {
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+ throw new runtime.RequiredError('datasetId', 'Required parameter requestParameters.datasetId was null or undefined when calling rerunTransform.');
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+ }
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+ queryParameters = {};
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+ headerParameters = {};
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+ if (!(this.configuration && this.configuration.accessToken)) return [3 /*break*/, 2];
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+ token = this.configuration.accessToken;
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+ return [4 /*yield*/, token("accessToken", [])];
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+ case 1:
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+ tokenString = _a.sent();
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+ if (tokenString) {
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+ headerParameters["Authorization"] = "Bearer ".concat(tokenString);
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+ }
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+ _a.label = 2;
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+ case 2: return [4 /*yield*/, this.request({
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+ path: "/projects/{projectId}/datasets/{datasetId}/rerun-transform".replace("{".concat("projectId", "}"), encodeURIComponent(String(requestParameters.projectId))).replace("{".concat("datasetId", "}"), encodeURIComponent(String(requestParameters.datasetId))),
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+ method: 'PUT',
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+ headers: headerParameters,
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+ query: queryParameters,
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+ }, initOverrides)];
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+ case 3:
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+ response = _a.sent();
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+ return [2 /*return*/, new runtime.VoidApiResponse(response)];
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+ }
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+ });
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+ });
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+ };
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+ /**
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+ * Rerun data transforms (TODO).
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+ * Rerun data transforms
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+ */
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+ DatasetsApi.prototype.rerunTransform = function (requestParameters, initOverrides) {
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+ return __awaiter(this, void 0, void 0, function () {
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+ return __generator(this, function (_a) {
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+ switch (_a.label) {
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+ case 0: return [4 /*yield*/, this.rerunTransformRaw(requestParameters, initOverrides)];
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+ case 1:
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+ _a.sent();
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+ return [2 /*return*/];
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  }
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  });
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  });
@@ -499,6 +607,66 @@ var DatasetsApi = /** @class */ (function (_super) {
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  });
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  });
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  };
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+ /**
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+ * Registers a dataset in the system that you upload files into
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+ * Upload private dataset
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+ */
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+ DatasetsApi.prototype.uploadDatasetRaw = function (requestParameters, initOverrides) {
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+ return __awaiter(this, void 0, void 0, function () {
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+ var queryParameters, headerParameters, token, tokenString, response;
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+ return __generator(this, function (_a) {
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+ switch (_a.label) {
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+ case 0:
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+ if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
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+ throw new runtime.RequiredError('projectId', 'Required parameter requestParameters.projectId was null or undefined when calling uploadDataset.');
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+ }
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+ if (requestParameters.uploadDatasetRequest === null || requestParameters.uploadDatasetRequest === undefined) {
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+ throw new runtime.RequiredError('uploadDatasetRequest', 'Required parameter requestParameters.uploadDatasetRequest was null or undefined when calling uploadDataset.');
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+ }
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+ queryParameters = {};
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+ headerParameters = {};
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+ headerParameters['Content-Type'] = 'application/json';
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+ if (!(this.configuration && this.configuration.accessToken)) return [3 /*break*/, 2];
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+ token = this.configuration.accessToken;
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+ return [4 /*yield*/, token("accessToken", [])];
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+ case 1:
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+ tokenString = _a.sent();
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+ if (tokenString) {
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+ headerParameters["Authorization"] = "Bearer ".concat(tokenString);
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+ }
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+ _a.label = 2;
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+ case 2: return [4 /*yield*/, this.request({
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+ path: "/projects/{projectId}/datasets/upload".replace("{".concat("projectId", "}"), encodeURIComponent(String(requestParameters.projectId))),
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+ method: 'POST',
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+ headers: headerParameters,
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+ query: queryParameters,
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+ body: (0, index_1.UploadDatasetRequestToJSON)(requestParameters.uploadDatasetRequest),
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+ }, initOverrides)];
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+ case 3:
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+ response = _a.sent();
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+ return [2 /*return*/, new runtime.JSONApiResponse(response, function (jsonValue) { return (0, index_1.UploadDatasetCreateResponseFromJSON)(jsonValue); })];
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+ }
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+ });
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+ });
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+ };
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+ /**
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+ * Registers a dataset in the system that you upload files into
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+ * Upload private dataset
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+ */
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+ DatasetsApi.prototype.uploadDataset = function (requestParameters, initOverrides) {
657
+ return __awaiter(this, void 0, void 0, function () {
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+ var response;
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+ return __generator(this, function (_a) {
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+ switch (_a.label) {
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+ case 0: return [4 /*yield*/, this.uploadDatasetRaw(requestParameters, initOverrides)];
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+ case 1:
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+ response = _a.sent();
664
+ return [4 /*yield*/, response.value()];
665
+ case 2: return [2 /*return*/, _a.sent()];
666
+ }
667
+ });
668
+ });
669
+ };
502
670
  return DatasetsApi;
503
671
  }(runtime.BaseAPI));
504
672
  exports.DatasetsApi = DatasetsApi;
@@ -10,7 +10,7 @@
10
10
  * Do not edit the class manually.
11
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  */
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12
  import * as runtime from '../runtime';
13
- import type { GetExecutionLogsResponse, StopExecutionResponse, Task } from '../models/index';
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+ import type { CreateResponse, GetExecutionLogsResponse, RunAnalysisRequest, StopExecutionResponse, Task } from '../models/index';
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14
  export interface GetExecutionLogsRequest {
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  datasetId: string;
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  projectId: string;
@@ -31,6 +31,10 @@ export interface GetTasksForExecutionRequest {
31
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  projectId: string;
32
32
  forceLive?: boolean;
33
33
  }
34
+ export interface RunAnalysisOperationRequest {
35
+ projectId: string;
36
+ runAnalysisRequest: RunAnalysisRequest;
37
+ }
34
38
  export interface StopAnalysisRequest {
35
39
  datasetId: string;
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40
  projectId: string;
@@ -83,6 +87,16 @@ export declare class ExecutionApi extends runtime.BaseAPI {
83
87
  * Get execution tasks
84
88
  */
85
89
  getTasksForExecution(requestParameters: GetTasksForExecutionRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<Array<Task>>;
90
+ /**
91
+ * Run analysis
92
+ * Run analysis
93
+ */
94
+ runAnalysisRaw(requestParameters: RunAnalysisOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<CreateResponse>>;
95
+ /**
96
+ * Run analysis
97
+ * Run analysis
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+ */
99
+ runAnalysis(requestParameters: RunAnalysisOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<CreateResponse>;
86
100
  /**
87
101
  * Terminates all analysis jobs related to this execution
88
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  * Stop execution
@@ -319,6 +319,66 @@ var ExecutionApi = /** @class */ (function (_super) {
319
319
  });
320
320
  });
321
321
  };
322
+ /**
323
+ * Run analysis
324
+ * Run analysis
325
+ */
326
+ ExecutionApi.prototype.runAnalysisRaw = function (requestParameters, initOverrides) {
327
+ return __awaiter(this, void 0, void 0, function () {
328
+ var queryParameters, headerParameters, token, tokenString, response;
329
+ return __generator(this, function (_a) {
330
+ switch (_a.label) {
331
+ case 0:
332
+ if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
333
+ throw new runtime.RequiredError('projectId', 'Required parameter requestParameters.projectId was null or undefined when calling runAnalysis.');
334
+ }
335
+ if (requestParameters.runAnalysisRequest === null || requestParameters.runAnalysisRequest === undefined) {
336
+ throw new runtime.RequiredError('runAnalysisRequest', 'Required parameter requestParameters.runAnalysisRequest was null or undefined when calling runAnalysis.');
337
+ }
338
+ queryParameters = {};
339
+ headerParameters = {};
340
+ headerParameters['Content-Type'] = 'application/json';
341
+ if (!(this.configuration && this.configuration.accessToken)) return [3 /*break*/, 2];
342
+ token = this.configuration.accessToken;
343
+ return [4 /*yield*/, token("accessToken", [])];
344
+ case 1:
345
+ tokenString = _a.sent();
346
+ if (tokenString) {
347
+ headerParameters["Authorization"] = "Bearer ".concat(tokenString);
348
+ }
349
+ _a.label = 2;
350
+ case 2: return [4 /*yield*/, this.request({
351
+ path: "/projects/{projectId}/execution".replace("{".concat("projectId", "}"), encodeURIComponent(String(requestParameters.projectId))),
352
+ method: 'POST',
353
+ headers: headerParameters,
354
+ query: queryParameters,
355
+ body: (0, index_1.RunAnalysisRequestToJSON)(requestParameters.runAnalysisRequest),
356
+ }, initOverrides)];
357
+ case 3:
358
+ response = _a.sent();
359
+ return [2 /*return*/, new runtime.JSONApiResponse(response, function (jsonValue) { return (0, index_1.CreateResponseFromJSON)(jsonValue); })];
360
+ }
361
+ });
362
+ });
363
+ };
364
+ /**
365
+ * Run analysis
366
+ * Run analysis
367
+ */
368
+ ExecutionApi.prototype.runAnalysis = function (requestParameters, initOverrides) {
369
+ return __awaiter(this, void 0, void 0, function () {
370
+ var response;
371
+ return __generator(this, function (_a) {
372
+ switch (_a.label) {
373
+ case 0: return [4 /*yield*/, this.runAnalysisRaw(requestParameters, initOverrides)];
374
+ case 1:
375
+ response = _a.sent();
376
+ return [4 /*yield*/, response.value()];
377
+ case 2: return [2 /*return*/, _a.sent()];
378
+ }
379
+ });
380
+ });
381
+ };
322
382
  /**
323
383
  * Terminates all analysis jobs related to this execution
324
384
  * Stop execution
@@ -52,7 +52,7 @@ export interface Dataset {
52
52
  * @type {Array<string>}
53
53
  * @memberof Dataset
54
54
  */
55
- sourceDatasets: Array<string>;
55
+ sourceDatasetIds: Array<string>;
56
56
  /**
57
57
  *
58
58
  * @type {Status}
@@ -26,7 +26,7 @@ function instanceOfDataset(value) {
26
26
  isInstance = isInstance && "description" in value;
27
27
  isInstance = isInstance && "projectId" in value;
28
28
  isInstance = isInstance && "processId" in value;
29
- isInstance = isInstance && "sourceDatasets" in value;
29
+ isInstance = isInstance && "sourceDatasetIds" in value;
30
30
  isInstance = isInstance && "status" in value;
31
31
  isInstance = isInstance && "tags" in value;
32
32
  isInstance = isInstance && "createdBy" in value;
@@ -49,7 +49,7 @@ function DatasetFromJSONTyped(json, ignoreDiscriminator) {
49
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  'description': json['description'],
50
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  'projectId': json['projectId'],
51
51
  'processId': json['processId'],
52
- 'sourceDatasets': json['sourceDatasets'],
52
+ 'sourceDatasetIds': json['sourceDatasetIds'],
53
53
  'status': (0, Status_1.StatusFromJSON)(json['status']),
54
54
  'tags': (json['tags'].map(Tag_1.TagFromJSON)),
55
55
  'createdBy': json['createdBy'],
@@ -71,7 +71,7 @@ function DatasetToJSON(value) {
71
71
  'description': value.description,
72
72
  'projectId': value.projectId,
73
73
  'processId': value.processId,
74
- 'sourceDatasets': value.sourceDatasets,
74
+ 'sourceDatasetIds': value.sourceDatasetIds,
75
75
  'status': (0, Status_1.StatusToJSON)(value.status),
76
76
  'tags': (value.tags.map(Tag_1.TagToJSON)),
77
77
  'createdBy': value.createdBy,
@@ -58,7 +58,7 @@ export interface DatasetDetail {
58
58
  * @type {Array<string>}
59
59
  * @memberof DatasetDetail
60
60
  */
61
- sourceDatasets: Array<string>;
61
+ sourceDatasetIds: Array<string>;
62
62
  /**
63
63
  *
64
64
  * @type {Status}
@@ -27,7 +27,7 @@ function instanceOfDatasetDetail(value) {
27
27
  isInstance = isInstance && "s3" in value;
28
28
  isInstance = isInstance && "processId" in value;
29
29
  isInstance = isInstance && "projectId" in value;
30
- isInstance = isInstance && "sourceDatasets" in value;
30
+ isInstance = isInstance && "sourceDatasetIds" in value;
31
31
  isInstance = isInstance && "status" in value;
32
32
  isInstance = isInstance && "statusMessage" in value;
33
33
  isInstance = isInstance && "tags" in value;
@@ -54,7 +54,7 @@ function DatasetDetailFromJSONTyped(json, ignoreDiscriminator) {
54
54
  's3': json['s3'],
55
55
  'processId': json['processId'],
56
56
  'projectId': json['projectId'],
57
- 'sourceDatasets': json['sourceDatasets'],
57
+ 'sourceDatasetIds': json['sourceDatasetIds'],
58
58
  'status': (0, Status_1.StatusFromJSON)(json['status']),
59
59
  'statusMessage': json['statusMessage'],
60
60
  'tags': (json['tags'].map(Tag_1.TagFromJSON)),
@@ -80,7 +80,7 @@ function DatasetDetailToJSON(value) {
80
80
  's3': value.s3,
81
81
  'processId': value.processId,
82
82
  'projectId': value.projectId,
83
- 'sourceDatasets': value.sourceDatasets,
83
+ 'sourceDatasetIds': value.sourceDatasetIds,
84
84
  'status': (0, Status_1.StatusToJSON)(value.status),
85
85
  'statusMessage': value.statusMessage,
86
86
  'tags': (value.tags.map(Tag_1.TagToJSON)),
@@ -0,0 +1,69 @@
1
+ /**
2
+ * Cirro Data
3
+ * Cirro Data Platform service API
4
+ *
5
+ * The version of the OpenAPI document: latest
6
+ * Contact: support@cirro.bio
7
+ *
8
+ * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
9
+ * https://openapi-generator.tech
10
+ * Do not edit the class manually.
11
+ */
12
+ /**
13
+ *
14
+ * @export
15
+ * @interface RunAnalysisRequest
16
+ */
17
+ export interface RunAnalysisRequest {
18
+ /**
19
+ *
20
+ * @type {string}
21
+ * @memberof RunAnalysisRequest
22
+ */
23
+ name: string;
24
+ /**
25
+ *
26
+ * @type {string}
27
+ * @memberof RunAnalysisRequest
28
+ */
29
+ description: string;
30
+ /**
31
+ *
32
+ * @type {string}
33
+ * @memberof RunAnalysisRequest
34
+ */
35
+ processId: string;
36
+ /**
37
+ *
38
+ * @type {Array<string>}
39
+ * @memberof RunAnalysisRequest
40
+ */
41
+ sourceDatasetIds: Array<string>;
42
+ /**
43
+ *
44
+ * @type {string}
45
+ * @memberof RunAnalysisRequest
46
+ */
47
+ resumeDatasetId: string;
48
+ /**
49
+ *
50
+ * @type {{ [key: string]: any; }}
51
+ * @memberof RunAnalysisRequest
52
+ */
53
+ params: {
54
+ [key: string]: any;
55
+ };
56
+ /**
57
+ *
58
+ * @type {Array<string>}
59
+ * @memberof RunAnalysisRequest
60
+ */
61
+ notificationEmails: Array<string>;
62
+ }
63
+ /**
64
+ * Check if a given object implements the RunAnalysisRequest interface.
65
+ */
66
+ export declare function instanceOfRunAnalysisRequest(value: object): boolean;
67
+ export declare function RunAnalysisRequestFromJSON(json: any): RunAnalysisRequest;
68
+ export declare function RunAnalysisRequestFromJSONTyped(json: any, ignoreDiscriminator: boolean): RunAnalysisRequest;
69
+ export declare function RunAnalysisRequestToJSON(value?: RunAnalysisRequest | null): any;
@@ -0,0 +1,68 @@
1
+ "use strict";
2
+ /* tslint:disable */
3
+ /* eslint-disable */
4
+ /**
5
+ * Cirro Data
6
+ * Cirro Data Platform service API
7
+ *
8
+ * The version of the OpenAPI document: latest
9
+ * Contact: support@cirro.bio
10
+ *
11
+ * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
12
+ * https://openapi-generator.tech
13
+ * Do not edit the class manually.
14
+ */
15
+ Object.defineProperty(exports, "__esModule", { value: true });
16
+ exports.RunAnalysisRequestToJSON = exports.RunAnalysisRequestFromJSONTyped = exports.RunAnalysisRequestFromJSON = exports.instanceOfRunAnalysisRequest = void 0;
17
+ /**
18
+ * Check if a given object implements the RunAnalysisRequest interface.
19
+ */
20
+ function instanceOfRunAnalysisRequest(value) {
21
+ var isInstance = true;
22
+ isInstance = isInstance && "name" in value;
23
+ isInstance = isInstance && "description" in value;
24
+ isInstance = isInstance && "processId" in value;
25
+ isInstance = isInstance && "sourceDatasetIds" in value;
26
+ isInstance = isInstance && "resumeDatasetId" in value;
27
+ isInstance = isInstance && "params" in value;
28
+ isInstance = isInstance && "notificationEmails" in value;
29
+ return isInstance;
30
+ }
31
+ exports.instanceOfRunAnalysisRequest = instanceOfRunAnalysisRequest;
32
+ function RunAnalysisRequestFromJSON(json) {
33
+ return RunAnalysisRequestFromJSONTyped(json, false);
34
+ }
35
+ exports.RunAnalysisRequestFromJSON = RunAnalysisRequestFromJSON;
36
+ function RunAnalysisRequestFromJSONTyped(json, ignoreDiscriminator) {
37
+ if ((json === undefined) || (json === null)) {
38
+ return json;
39
+ }
40
+ return {
41
+ 'name': json['name'],
42
+ 'description': json['description'],
43
+ 'processId': json['processId'],
44
+ 'sourceDatasetIds': json['sourceDatasetIds'],
45
+ 'resumeDatasetId': json['resumeDatasetId'],
46
+ 'params': json['params'],
47
+ 'notificationEmails': json['notificationEmails'],
48
+ };
49
+ }
50
+ exports.RunAnalysisRequestFromJSONTyped = RunAnalysisRequestFromJSONTyped;
51
+ function RunAnalysisRequestToJSON(value) {
52
+ if (value === undefined) {
53
+ return undefined;
54
+ }
55
+ if (value === null) {
56
+ return null;
57
+ }
58
+ return {
59
+ 'name': value.name,
60
+ 'description': value.description,
61
+ 'processId': value.processId,
62
+ 'sourceDatasetIds': value.sourceDatasetIds,
63
+ 'resumeDatasetId': value.resumeDatasetId,
64
+ 'params': value.params,
65
+ 'notificationEmails': value.notificationEmails,
66
+ };
67
+ }
68
+ exports.RunAnalysisRequestToJSON = RunAnalysisRequestToJSON;
@@ -37,6 +37,7 @@ export * from './ProjectSettings';
37
37
  export * from './ProjectUser';
38
38
  export * from './Reference';
39
39
  export * from './ReferenceType';
40
+ export * from './RunAnalysisRequest';
40
41
  export * from './Sample';
41
42
  export * from './SampleRequest';
42
43
  export * from './ServiceConnection';
@@ -55,6 +55,7 @@ __exportStar(require("./ProjectSettings"), exports);
55
55
  __exportStar(require("./ProjectUser"), exports);
56
56
  __exportStar(require("./Reference"), exports);
57
57
  __exportStar(require("./ReferenceType"), exports);
58
+ __exportStar(require("./RunAnalysisRequest"), exports);
58
59
  __exportStar(require("./Sample"), exports);
59
60
  __exportStar(require("./SampleRequest"), exports);
60
61
  __exportStar(require("./ServiceConnection"), exports);
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@cirrobio/api-client",
3
- "version": "0.0.21-alpha",
3
+ "version": "0.0.23-alpha",
4
4
  "description": "API client for Cirro",
5
5
  "author": "CirroBio",
6
6
  "repository": {
@@ -69,9 +69,19 @@ export interface ImportPublicDatasetRequest {
69
69
  importDataRequest: ImportDataRequest;
70
70
  }
71
71
 
72
- export interface RegisterDatasetRequest {
72
+ export interface IngestSamplesRequest {
73
73
  projectId: string;
74
- uploadDatasetRequest: UploadDatasetRequest;
74
+ datasetId: string;
75
+ }
76
+
77
+ export interface RegenerateManifestRequest {
78
+ projectId: string;
79
+ datasetId: string;
80
+ }
81
+
82
+ export interface RerunTransformRequest {
83
+ projectId: string;
84
+ datasetId: string;
75
85
  }
76
86
 
77
87
  export interface UpdateDatasetOperationRequest {
@@ -80,6 +90,11 @@ export interface UpdateDatasetOperationRequest {
80
90
  updateDatasetRequest: UpdateDatasetRequest;
81
91
  }
82
92
 
93
+ export interface UploadDatasetOperationRequest {
94
+ projectId: string;
95
+ uploadDatasetRequest: UploadDatasetRequest;
96
+ }
97
+
83
98
  /**
84
99
  *
85
100
  */
@@ -317,23 +332,64 @@ export class DatasetsApi extends runtime.BaseAPI {
317
332
  }
318
333
 
319
334
  /**
320
- * Registers a dataset in the system that you upload files into
321
- * Upload private dataset
335
+ * Rerun sample ingest (TODO).
336
+ * Rerun sample ingest
322
337
  */
323
- async registerDatasetRaw(requestParameters: RegisterDatasetRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<UploadDatasetCreateResponse>> {
338
+ async ingestSamplesRaw(requestParameters: IngestSamplesRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<void>> {
324
339
  if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
325
- throw new runtime.RequiredError('projectId','Required parameter requestParameters.projectId was null or undefined when calling registerDataset.');
340
+ throw new runtime.RequiredError('projectId','Required parameter requestParameters.projectId was null or undefined when calling ingestSamples.');
326
341
  }
327
342
 
328
- if (requestParameters.uploadDatasetRequest === null || requestParameters.uploadDatasetRequest === undefined) {
329
- throw new runtime.RequiredError('uploadDatasetRequest','Required parameter requestParameters.uploadDatasetRequest was null or undefined when calling registerDataset.');
343
+ if (requestParameters.datasetId === null || requestParameters.datasetId === undefined) {
344
+ throw new runtime.RequiredError('datasetId','Required parameter requestParameters.datasetId was null or undefined when calling ingestSamples.');
330
345
  }
331
346
 
332
347
  const queryParameters: any = {};
333
348
 
334
349
  const headerParameters: runtime.HTTPHeaders = {};
335
350
 
336
- headerParameters['Content-Type'] = 'application/json';
351
+ if (this.configuration && this.configuration.accessToken) {
352
+ const token = this.configuration.accessToken;
353
+ const tokenString = await token("accessToken", []);
354
+
355
+ if (tokenString) {
356
+ headerParameters["Authorization"] = `Bearer ${tokenString}`;
357
+ }
358
+ }
359
+ const response = await this.request({
360
+ path: `/projects/{projectId}/datasets/{datasetId}/ingest-samples`.replace(`{${"projectId"}}`, encodeURIComponent(String(requestParameters.projectId))).replace(`{${"datasetId"}}`, encodeURIComponent(String(requestParameters.datasetId))),
361
+ method: 'PUT',
362
+ headers: headerParameters,
363
+ query: queryParameters,
364
+ }, initOverrides);
365
+
366
+ return new runtime.VoidApiResponse(response);
367
+ }
368
+
369
+ /**
370
+ * Rerun sample ingest (TODO).
371
+ * Rerun sample ingest
372
+ */
373
+ async ingestSamples(requestParameters: IngestSamplesRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<void> {
374
+ await this.ingestSamplesRaw(requestParameters, initOverrides);
375
+ }
376
+
377
+ /**
378
+ * Regenerate dataset manifest (TODO).
379
+ * Regenerate dataset manifest
380
+ */
381
+ async regenerateManifestRaw(requestParameters: RegenerateManifestRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<void>> {
382
+ if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
383
+ throw new runtime.RequiredError('projectId','Required parameter requestParameters.projectId was null or undefined when calling regenerateManifest.');
384
+ }
385
+
386
+ if (requestParameters.datasetId === null || requestParameters.datasetId === undefined) {
387
+ throw new runtime.RequiredError('datasetId','Required parameter requestParameters.datasetId was null or undefined when calling regenerateManifest.');
388
+ }
389
+
390
+ const queryParameters: any = {};
391
+
392
+ const headerParameters: runtime.HTTPHeaders = {};
337
393
 
338
394
  if (this.configuration && this.configuration.accessToken) {
339
395
  const token = this.configuration.accessToken;
@@ -344,23 +400,64 @@ export class DatasetsApi extends runtime.BaseAPI {
344
400
  }
345
401
  }
346
402
  const response = await this.request({
347
- path: `/projects/{projectId}/datasets/upload`.replace(`{${"projectId"}}`, encodeURIComponent(String(requestParameters.projectId))),
348
- method: 'POST',
403
+ path: `/projects/{projectId}/datasets/{datasetId}/regenerate-manifest`.replace(`{${"projectId"}}`, encodeURIComponent(String(requestParameters.projectId))).replace(`{${"datasetId"}}`, encodeURIComponent(String(requestParameters.datasetId))),
404
+ method: 'PUT',
349
405
  headers: headerParameters,
350
406
  query: queryParameters,
351
- body: UploadDatasetRequestToJSON(requestParameters.uploadDatasetRequest),
352
407
  }, initOverrides);
353
408
 
354
- return new runtime.JSONApiResponse(response, (jsonValue) => UploadDatasetCreateResponseFromJSON(jsonValue));
409
+ return new runtime.VoidApiResponse(response);
355
410
  }
356
411
 
357
412
  /**
358
- * Registers a dataset in the system that you upload files into
359
- * Upload private dataset
413
+ * Regenerate dataset manifest (TODO).
414
+ * Regenerate dataset manifest
360
415
  */
361
- async registerDataset(requestParameters: RegisterDatasetRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<UploadDatasetCreateResponse> {
362
- const response = await this.registerDatasetRaw(requestParameters, initOverrides);
363
- return await response.value();
416
+ async regenerateManifest(requestParameters: RegenerateManifestRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<void> {
417
+ await this.regenerateManifestRaw(requestParameters, initOverrides);
418
+ }
419
+
420
+ /**
421
+ * Rerun data transforms (TODO).
422
+ * Rerun data transforms
423
+ */
424
+ async rerunTransformRaw(requestParameters: RerunTransformRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<void>> {
425
+ if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
426
+ throw new runtime.RequiredError('projectId','Required parameter requestParameters.projectId was null or undefined when calling rerunTransform.');
427
+ }
428
+
429
+ if (requestParameters.datasetId === null || requestParameters.datasetId === undefined) {
430
+ throw new runtime.RequiredError('datasetId','Required parameter requestParameters.datasetId was null or undefined when calling rerunTransform.');
431
+ }
432
+
433
+ const queryParameters: any = {};
434
+
435
+ const headerParameters: runtime.HTTPHeaders = {};
436
+
437
+ if (this.configuration && this.configuration.accessToken) {
438
+ const token = this.configuration.accessToken;
439
+ const tokenString = await token("accessToken", []);
440
+
441
+ if (tokenString) {
442
+ headerParameters["Authorization"] = `Bearer ${tokenString}`;
443
+ }
444
+ }
445
+ const response = await this.request({
446
+ path: `/projects/{projectId}/datasets/{datasetId}/rerun-transform`.replace(`{${"projectId"}}`, encodeURIComponent(String(requestParameters.projectId))).replace(`{${"datasetId"}}`, encodeURIComponent(String(requestParameters.datasetId))),
447
+ method: 'PUT',
448
+ headers: headerParameters,
449
+ query: queryParameters,
450
+ }, initOverrides);
451
+
452
+ return new runtime.VoidApiResponse(response);
453
+ }
454
+
455
+ /**
456
+ * Rerun data transforms (TODO).
457
+ * Rerun data transforms
458
+ */
459
+ async rerunTransform(requestParameters: RerunTransformRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<void> {
460
+ await this.rerunTransformRaw(requestParameters, initOverrides);
364
461
  }
365
462
 
366
463
  /**
@@ -414,4 +511,51 @@ export class DatasetsApi extends runtime.BaseAPI {
414
511
  return await response.value();
415
512
  }
416
513
 
514
+ /**
515
+ * Registers a dataset in the system that you upload files into
516
+ * Upload private dataset
517
+ */
518
+ async uploadDatasetRaw(requestParameters: UploadDatasetOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<UploadDatasetCreateResponse>> {
519
+ if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
520
+ throw new runtime.RequiredError('projectId','Required parameter requestParameters.projectId was null or undefined when calling uploadDataset.');
521
+ }
522
+
523
+ if (requestParameters.uploadDatasetRequest === null || requestParameters.uploadDatasetRequest === undefined) {
524
+ throw new runtime.RequiredError('uploadDatasetRequest','Required parameter requestParameters.uploadDatasetRequest was null or undefined when calling uploadDataset.');
525
+ }
526
+
527
+ const queryParameters: any = {};
528
+
529
+ const headerParameters: runtime.HTTPHeaders = {};
530
+
531
+ headerParameters['Content-Type'] = 'application/json';
532
+
533
+ if (this.configuration && this.configuration.accessToken) {
534
+ const token = this.configuration.accessToken;
535
+ const tokenString = await token("accessToken", []);
536
+
537
+ if (tokenString) {
538
+ headerParameters["Authorization"] = `Bearer ${tokenString}`;
539
+ }
540
+ }
541
+ const response = await this.request({
542
+ path: `/projects/{projectId}/datasets/upload`.replace(`{${"projectId"}}`, encodeURIComponent(String(requestParameters.projectId))),
543
+ method: 'POST',
544
+ headers: headerParameters,
545
+ query: queryParameters,
546
+ body: UploadDatasetRequestToJSON(requestParameters.uploadDatasetRequest),
547
+ }, initOverrides);
548
+
549
+ return new runtime.JSONApiResponse(response, (jsonValue) => UploadDatasetCreateResponseFromJSON(jsonValue));
550
+ }
551
+
552
+ /**
553
+ * Registers a dataset in the system that you upload files into
554
+ * Upload private dataset
555
+ */
556
+ async uploadDataset(requestParameters: UploadDatasetOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<UploadDatasetCreateResponse> {
557
+ const response = await this.uploadDatasetRaw(requestParameters, initOverrides);
558
+ return await response.value();
559
+ }
560
+
417
561
  }
@@ -15,13 +15,19 @@
15
15
 
16
16
  import * as runtime from '../runtime';
17
17
  import type {
18
+ CreateResponse,
18
19
  GetExecutionLogsResponse,
20
+ RunAnalysisRequest,
19
21
  StopExecutionResponse,
20
22
  Task,
21
23
  } from '../models/index';
22
24
  import {
25
+ CreateResponseFromJSON,
26
+ CreateResponseToJSON,
23
27
  GetExecutionLogsResponseFromJSON,
24
28
  GetExecutionLogsResponseToJSON,
29
+ RunAnalysisRequestFromJSON,
30
+ RunAnalysisRequestToJSON,
25
31
  StopExecutionResponseFromJSON,
26
32
  StopExecutionResponseToJSON,
27
33
  TaskFromJSON,
@@ -52,6 +58,11 @@ export interface GetTasksForExecutionRequest {
52
58
  forceLive?: boolean;
53
59
  }
54
60
 
61
+ export interface RunAnalysisOperationRequest {
62
+ projectId: string;
63
+ runAnalysisRequest: RunAnalysisRequest;
64
+ }
65
+
55
66
  export interface StopAnalysisRequest {
56
67
  datasetId: string;
57
68
  projectId: string;
@@ -254,6 +265,53 @@ export class ExecutionApi extends runtime.BaseAPI {
254
265
  return await response.value();
255
266
  }
256
267
 
268
+ /**
269
+ * Run analysis
270
+ * Run analysis
271
+ */
272
+ async runAnalysisRaw(requestParameters: RunAnalysisOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<runtime.ApiResponse<CreateResponse>> {
273
+ if (requestParameters.projectId === null || requestParameters.projectId === undefined) {
274
+ throw new runtime.RequiredError('projectId','Required parameter requestParameters.projectId was null or undefined when calling runAnalysis.');
275
+ }
276
+
277
+ if (requestParameters.runAnalysisRequest === null || requestParameters.runAnalysisRequest === undefined) {
278
+ throw new runtime.RequiredError('runAnalysisRequest','Required parameter requestParameters.runAnalysisRequest was null or undefined when calling runAnalysis.');
279
+ }
280
+
281
+ const queryParameters: any = {};
282
+
283
+ const headerParameters: runtime.HTTPHeaders = {};
284
+
285
+ headerParameters['Content-Type'] = 'application/json';
286
+
287
+ if (this.configuration && this.configuration.accessToken) {
288
+ const token = this.configuration.accessToken;
289
+ const tokenString = await token("accessToken", []);
290
+
291
+ if (tokenString) {
292
+ headerParameters["Authorization"] = `Bearer ${tokenString}`;
293
+ }
294
+ }
295
+ const response = await this.request({
296
+ path: `/projects/{projectId}/execution`.replace(`{${"projectId"}}`, encodeURIComponent(String(requestParameters.projectId))),
297
+ method: 'POST',
298
+ headers: headerParameters,
299
+ query: queryParameters,
300
+ body: RunAnalysisRequestToJSON(requestParameters.runAnalysisRequest),
301
+ }, initOverrides);
302
+
303
+ return new runtime.JSONApiResponse(response, (jsonValue) => CreateResponseFromJSON(jsonValue));
304
+ }
305
+
306
+ /**
307
+ * Run analysis
308
+ * Run analysis
309
+ */
310
+ async runAnalysis(requestParameters: RunAnalysisOperationRequest, initOverrides?: RequestInit | runtime.InitOverrideFunction): Promise<CreateResponse> {
311
+ const response = await this.runAnalysisRaw(requestParameters, initOverrides);
312
+ return await response.value();
313
+ }
314
+
257
315
  /**
258
316
  * Terminates all analysis jobs related to this execution
259
317
  * Stop execution
@@ -67,7 +67,7 @@ export interface Dataset {
67
67
  * @type {Array<string>}
68
68
  * @memberof Dataset
69
69
  */
70
- sourceDatasets: Array<string>;
70
+ sourceDatasetIds: Array<string>;
71
71
  /**
72
72
  *
73
73
  * @type {Status}
@@ -110,7 +110,7 @@ export function instanceOfDataset(value: object): boolean {
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  isInstance = isInstance && "description" in value;
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  isInstance = isInstance && "projectId" in value;
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  isInstance = isInstance && "processId" in value;
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- isInstance = isInstance && "sourceDatasets" in value;
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+ isInstance = isInstance && "sourceDatasetIds" in value;
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  isInstance = isInstance && "status" in value;
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  isInstance = isInstance && "tags" in value;
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  isInstance = isInstance && "createdBy" in value;
@@ -135,7 +135,7 @@ export function DatasetFromJSONTyped(json: any, ignoreDiscriminator: boolean): D
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  'description': json['description'],
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  'projectId': json['projectId'],
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  'processId': json['processId'],
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- 'sourceDatasets': json['sourceDatasets'],
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+ 'sourceDatasetIds': json['sourceDatasetIds'],
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  'status': StatusFromJSON(json['status']),
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  'tags': ((json['tags'] as Array<any>).map(TagFromJSON)),
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  'createdBy': json['createdBy'],
@@ -158,7 +158,7 @@ export function DatasetToJSON(value?: Dataset | null): any {
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  'description': value.description,
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  'projectId': value.projectId,
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  'processId': value.processId,
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- 'sourceDatasets': value.sourceDatasets,
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+ 'sourceDatasetIds': value.sourceDatasetIds,
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  'status': StatusToJSON(value.status),
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  'tags': ((value.tags as Array<any>).map(TagToJSON)),
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  'createdBy': value.createdBy,
@@ -73,7 +73,7 @@ export interface DatasetDetail {
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  * @type {Array<string>}
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  * @memberof DatasetDetail
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  */
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- sourceDatasets: Array<string>;
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+ sourceDatasetIds: Array<string>;
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  /**
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  *
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  * @type {Status}
@@ -135,7 +135,7 @@ export function instanceOfDatasetDetail(value: object): boolean {
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  isInstance = isInstance && "s3" in value;
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  isInstance = isInstance && "processId" in value;
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  isInstance = isInstance && "projectId" in value;
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- isInstance = isInstance && "sourceDatasets" in value;
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+ isInstance = isInstance && "sourceDatasetIds" in value;
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  isInstance = isInstance && "status" in value;
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  isInstance = isInstance && "statusMessage" in value;
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  isInstance = isInstance && "tags" in value;
@@ -164,7 +164,7 @@ export function DatasetDetailFromJSONTyped(json: any, ignoreDiscriminator: boole
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  's3': json['s3'],
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  'processId': json['processId'],
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  'projectId': json['projectId'],
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- 'sourceDatasets': json['sourceDatasets'],
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+ 'sourceDatasetIds': json['sourceDatasetIds'],
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  'status': StatusFromJSON(json['status']),
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  'statusMessage': json['statusMessage'],
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  'tags': ((json['tags'] as Array<any>).map(TagFromJSON)),
@@ -191,7 +191,7 @@ export function DatasetDetailToJSON(value?: DatasetDetail | null): any {
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  's3': value.s3,
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  'processId': value.processId,
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  'projectId': value.projectId,
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- 'sourceDatasets': value.sourceDatasets,
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+ 'sourceDatasetIds': value.sourceDatasetIds,
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  'status': StatusToJSON(value.status),
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  'statusMessage': value.statusMessage,
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  'tags': ((value.tags as Array<any>).map(TagToJSON)),
@@ -0,0 +1,120 @@
1
+ /* tslint:disable */
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+ /* eslint-disable */
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+ /**
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+ * Cirro Data
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+ * Cirro Data Platform service API
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+ *
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+ * The version of the OpenAPI document: latest
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+ * Contact: support@cirro.bio
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+ *
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+ * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
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+ * https://openapi-generator.tech
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+ * Do not edit the class manually.
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+ */
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+
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+ import { exists, mapValues } from '../runtime';
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+ /**
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+ *
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+ * @export
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+ * @interface RunAnalysisRequest
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+ */
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+ export interface RunAnalysisRequest {
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+ /**
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+ *
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+ * @type {string}
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+ * @memberof RunAnalysisRequest
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+ */
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+ name: string;
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+ /**
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+ *
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+ * @type {string}
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+ * @memberof RunAnalysisRequest
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+ */
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+ description: string;
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+ /**
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+ *
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+ * @type {string}
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+ * @memberof RunAnalysisRequest
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+ */
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+ processId: string;
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+ /**
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+ *
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+ * @type {Array<string>}
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+ * @memberof RunAnalysisRequest
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+ */
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+ sourceDatasetIds: Array<string>;
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+ /**
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+ *
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+ * @type {string}
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+ * @memberof RunAnalysisRequest
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+ */
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+ resumeDatasetId: string;
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+ /**
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+ *
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+ * @type {{ [key: string]: any; }}
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+ * @memberof RunAnalysisRequest
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+ */
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+ params: { [key: string]: any; };
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+ /**
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+ *
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+ * @type {Array<string>}
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+ * @memberof RunAnalysisRequest
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+ */
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+ notificationEmails: Array<string>;
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+ }
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+
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+ /**
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+ * Check if a given object implements the RunAnalysisRequest interface.
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+ */
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+ export function instanceOfRunAnalysisRequest(value: object): boolean {
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+ let isInstance = true;
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+ isInstance = isInstance && "name" in value;
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+ isInstance = isInstance && "description" in value;
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+ isInstance = isInstance && "processId" in value;
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+ isInstance = isInstance && "sourceDatasetIds" in value;
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+ isInstance = isInstance && "resumeDatasetId" in value;
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+ isInstance = isInstance && "params" in value;
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+ isInstance = isInstance && "notificationEmails" in value;
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+
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+ return isInstance;
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+ }
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+
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+ export function RunAnalysisRequestFromJSON(json: any): RunAnalysisRequest {
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+ return RunAnalysisRequestFromJSONTyped(json, false);
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+ }
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+
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+ export function RunAnalysisRequestFromJSONTyped(json: any, ignoreDiscriminator: boolean): RunAnalysisRequest {
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+ if ((json === undefined) || (json === null)) {
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+ return json;
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+ }
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+ return {
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+
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+ 'name': json['name'],
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+ 'description': json['description'],
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+ 'processId': json['processId'],
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+ 'sourceDatasetIds': json['sourceDatasetIds'],
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+ 'resumeDatasetId': json['resumeDatasetId'],
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+ 'params': json['params'],
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+ 'notificationEmails': json['notificationEmails'],
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+ };
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+ }
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+
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+ export function RunAnalysisRequestToJSON(value?: RunAnalysisRequest | null): any {
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+ if (value === undefined) {
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+ return undefined;
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+ }
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+ if (value === null) {
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+ return null;
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+ }
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+ return {
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+
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+ 'name': value.name,
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+ 'description': value.description,
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+ 'processId': value.processId,
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+ 'sourceDatasetIds': value.sourceDatasetIds,
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+ 'resumeDatasetId': value.resumeDatasetId,
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+ 'params': value.params,
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+ 'notificationEmails': value.notificationEmails,
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+ };
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+ }
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+
@@ -39,6 +39,7 @@ export * from './ProjectSettings';
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  export * from './ProjectUser';
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  export * from './Reference';
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  export * from './ReferenceType';
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+ export * from './RunAnalysisRequest';
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  export * from './Sample';
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  export * from './SampleRequest';
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  export * from './ServiceConnection';