@chemistry/math 2.7.0 → 3.0.1

package/dist/transform3d.d.ts

@@ -1,70 +1,71 @@
-import { ICloneable } from "@chemistry/common";
-import { Quaternion } from "./quaternion";
-import { Vec3 } from "./vec3";
-/**
- * Class to work with Matrix4x4 (When normalized have proberty  A^-1 = A^t)
- * (used for transformation in 3D)
- * |  0  4  8  12  |   |  RS R  R  T  |
- * |  1  5  9  13  |   |  R  RS R  T  |
- * |  2  6  10 14  | = |  R  R  RS T  |
- * |  3  7  11 15  |   |  0  0  0  1  |
- */
-export declare class Transform3D implements ICloneable<Transform3D> {
-    static equals(matrix1: Transform3D, matrix2: Transform3D): boolean;
-    /**
-     * Return Transformation from Scale
-     */
-    static fromScale(scale: number): Transform3D;
-    /**
-     * Return Transformation from Quaternion
-     */
-    static fromQuaternion(quaternion: Quaternion): Transform3D;
-    static fromMultiplication(transform1: Transform3D, transform2: Transform3D): Transform3D;
-    /**
-     * Return Transformation by Translation
-     */
-    static fromTranslation(translation: Vec3): Transform3D;
-    /**
-     * Return Transformation from rootation about an axis
-     */
-    static fromRotation(axis: Vec3, angle: number): Transform3D;
-    protected elements: number[];
-    constructor(elements?: number[]);
-    toString(): string;
-    /**
-     * Set value to specified element of the matrix
-     */
-    set(row: number, col: number, value: number): void;
-    /**
-     * Return specified element of the matrix
-     */
-    get(row: number, col: number): number;
-    /**
-     *  Multipy vector to the Matrix
-     */
-    project(position: Vec3): Vec3;
-    rotate(axis: Vec3, angle: number): Transform3D;
-    /**
-     * Add translational component to current transformation
-     */
-    translate(vec: Vec3): Transform3D;
-    /**
-     * Extract translational component of the transformation
-     */
-    extractTranslation(): Vec3;
-    extractScale(): number;
-    /**
-     * Return Inverse to current transformation (by inverting matrix)
-     * (allow to unproject vectors)
-     */
-    inverse(): Transform3D;
-    /**
-     * Return determinant of transformation matrix
-     */
-    determinant(): number;
-    /**
-     * Clone current transformation
-     */
-    clone(): Transform3D;
-    equals(transform: Transform3D): boolean;
-}
+import { ICloneable } from '@chemistry/common';
+import { Quaternion } from './quaternion';
+import { Vec3 } from './vec3';
+/**
+ * Class to work with Matrix4x4 (When normalized have proberty  A^-1 = A^t)
+ * (used for transformation in 3D)
+ * |  0  4  8  12  |   |  RS R  R  T  |
+ * |  1  5  9  13  |   |  R  RS R  T  |
+ * |  2  6  10 14  | = |  R  R  RS T  |
+ * |  3  7  11 15  |   |  0  0  0  1  |
+ */
+export declare class Transform3D implements ICloneable<Transform3D> {
+    static equals(matrix1: Transform3D, matrix2: Transform3D): boolean;
+    /**
+     * Return Transformation from Scale
+     */
+    static fromScale(scale: number): Transform3D;
+    /**
+     * Return Transformation from Quaternion
+     */
+    static fromQuaternion(quaternion: Quaternion): Transform3D;
+    static fromMultiplication(transform1: Transform3D, transform2: Transform3D): Transform3D;
+    /**
+     * Return Transformation by Translation
+     */
+    static fromTranslation(translation: Vec3): Transform3D;
+    /**
+     * Return Transformation from rootation about an axis
+     */
+    static fromRotation(axis: Vec3, angle: number): Transform3D;
+    protected elements: number[];
+    constructor(elements?: number[]);
+    toString(): string;
+    /**
+     * Set value to specified element of the matrix
+     */
+    set(row: number, col: number, value: number): void;
+    /**
+     * Return specified element of the matrix
+     */
+    get(row: number, col: number): number;
+    /**
+     *  Multipy vector to the Matrix
+     */
+    project(position: Vec3): Vec3;
+    rotate(axis: Vec3, angle: number): Transform3D;
+    /**
+     * Add translational component to current transformation
+     */
+    translate(vec: Vec3): Transform3D;
+    /**
+     * Extract translational component of the transformation
+     */
+    extractTranslation(): Vec3;
+    extractScale(): number;
+    /**
+     * Return Inverse to current transformation (by inverting matrix)
+     * (allow to unproject vectors)
+     */
+    inverse(): Transform3D;
+    /**
+     * Return determinant of transformation matrix
+     */
+    determinant(): number;
+    /**
+     * Clone current transformation
+     */
+    clone(): Transform3D;
+    equals(transform: Transform3D): boolean;
+}
+//# sourceMappingURL=transform3d.d.ts.map

package/dist/transform3d.d.ts.map

@@ -0,0 +1 @@
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package/dist/transform3d.js

@@ -0,0 +1,392 @@
+import { EPSILON } from '@chemistry/common';
+import { Quaternion } from './quaternion';
+import { Vec3 } from './vec3';
+/**
+ * Class to work with Matrix4x4 (When normalized have proberty  A^-1 = A^t)
+ * (used for transformation in 3D)
+ * |  0  4  8  12  |   |  RS R  R  T  |
+ * |  1  5  9  13  |   |  R  RS R  T  |
+ * |  2  6  10 14  | = |  R  R  RS T  |
+ * |  3  7  11 15  |   |  0  0  0  1  |
+ */
+export class Transform3D {
+    static equals(matrix1, matrix2) {
+        return (Math.abs(matrix1.elements[0] - matrix2.elements[0]) < EPSILON &&
+            Math.abs(matrix1.elements[1] - matrix2.elements[1]) < EPSILON &&
+            Math.abs(matrix1.elements[2] - matrix2.elements[2]) < EPSILON &&
+            Math.abs(matrix1.elements[3] - matrix2.elements[3]) < EPSILON &&
+            Math.abs(matrix1.elements[4] - matrix2.elements[4]) < EPSILON &&
+            Math.abs(matrix1.elements[5] - matrix2.elements[5]) < EPSILON &&
+            Math.abs(matrix1.elements[6] - matrix2.elements[6]) < EPSILON &&
+            Math.abs(matrix1.elements[7] - matrix2.elements[7]) < EPSILON &&
+            Math.abs(matrix1.elements[8] - matrix2.elements[8]) < EPSILON &&
+            Math.abs(matrix1.elements[9] - matrix2.elements[9]) < EPSILON &&
+            Math.abs(matrix1.elements[10] - matrix2.elements[10]) < EPSILON &&
+            Math.abs(matrix1.elements[11] - matrix2.elements[11]) < EPSILON &&
+            Math.abs(matrix1.elements[12] - matrix2.elements[12]) < EPSILON &&
+            Math.abs(matrix1.elements[13] - matrix2.elements[13]) < EPSILON &&
+            Math.abs(matrix1.elements[14] - matrix2.elements[14]) < EPSILON &&
+            Math.abs(matrix1.elements[15] - matrix2.elements[15]) < EPSILON);
+    }
+    /**
+     * Return Transformation from Scale
+     */
+    static fromScale(scale) {
+        return new Transform3D([scale, 0, 0, 0, 0, scale, 0, 0, 0, 0, scale, 0, 0, 0, 0, 1]);
+    }
+    /**
+     * Return Transformation from Quaternion
+     */
+    static fromQuaternion(quaternion) {
+        const elements = [1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1];
+        const x2 = quaternion.X() + quaternion.X();
+        const y2 = quaternion.Y() + quaternion.Y();
+        const z2 = quaternion.Z() + quaternion.Z();
+        const xx = quaternion.X() * x2;
+        const xy = quaternion.X() * y2;
+        const xz = quaternion.X() * z2;
+        const yy = quaternion.Y() * y2;
+        const yz = quaternion.Y() * z2;
+        const zz = quaternion.Z() * z2;
+        const wx = quaternion.W() * x2;
+        const wy = quaternion.W() * y2;
+        const wz = quaternion.W() * z2;
+        elements[3] = elements[7] = elements[11] = elements[12] = elements[13] = elements[14] = 0;
+        elements[15] = 1;
+        elements[0] = 1 - (yy + zz);
+        elements[4] = xy + wz;
+        elements[8] = xz - wy;
+        elements[1] = xy - wz;
+        elements[5] = 1 - (xx + zz);
+        elements[9] = yz + wx;
+        elements[2] = xz + wy;
+        elements[6] = yz - wx;
+        elements[10] = 1 - (xx + yy);
+        return new Transform3D(elements);
+    }
+    static fromMultiplication(transform1, transform2) {
+        const m1 = transform1.elements;
+        const m2 = transform2.elements;
+        return new Transform3D([
+            m1[0] * m2[0] + m1[1] * m2[4] + m1[2] * m2[8] + m1[3] * m2[12],
+            m1[0] * m2[1] + m1[1] * m2[5] + m1[2] * m2[9] + m1[3] * m2[13],
+            m1[0] * m2[2] + m1[1] * m2[6] + m1[2] * m2[10] + m1[3] * m2[14],
+            m1[0] * m2[3] + m1[1] * m2[7] + m1[2] * m2[11] + m1[3] * m2[15],
+            m1[4] * m2[0] + m1[5] * m2[4] + m1[6] * m2[8] + m1[7] * m2[12],
+            m1[4] * m2[1] + m1[5] * m2[5] + m1[6] * m2[9] + m1[7] * m2[13],
+            m1[4] * m2[2] + m1[5] * m2[6] + m1[6] * m2[10] + m1[7] * m2[14],
+            m1[4] * m2[3] + m1[5] * m2[7] + m1[6] * m2[11] + m1[7] * m2[15],
+            m1[8] * m2[0] + m1[9] * m2[4] + m1[10] * m2[8] + m1[11] * m2[12],
+            m1[8] * m2[1] + m1[9] * m2[5] + m1[10] * m2[9] + m1[11] * m2[13],
+            m1[8] * m2[2] + m1[9] * m2[6] + m1[10] * m2[10] + m1[11] * m2[14],
+            m1[8] * m2[3] + m1[9] * m2[7] + m1[10] * m2[11] + m1[11] * m2[15],
+            m1[12] * m2[0] + m1[13] * m2[4] + m1[14] * m2[8] + m1[15] * m2[12],
+            m1[12] * m2[1] + m1[13] * m2[5] + m1[14] * m2[9] + m1[15] * m2[13],
+            m1[12] * m2[2] + m1[13] * m2[6] + m1[14] * m2[10] + m1[15] * m2[14],
+            m1[12] * m2[3] + m1[13] * m2[7] + m1[14] * m2[11] + m1[15] * m2[15],
+        ]);
+    }
+    /**
+     * Return Transformation by Translation
+     */
+    static fromTranslation(translation) {
+        return new Transform3D([
+            1,
+            0,
+            0,
+            0,
+            0,
+            1,
+            0,
+            0,
+            0,
+            0,
+            1,
+            0,
+            translation.x,
+            translation.y,
+            translation.z,
+            1,
+        ]);
+    }
+    /**
+     * Return Transformation from rootation about an axis
+     */
+    static fromRotation(axis, angle) {
+        const quat = Quaternion.fromAxisAngle(axis, angle);
+        return Transform3D.fromQuaternion(quat);
+    }
+    constructor(elements) {
+        if (elements?.length) {
+            if (elements.length !== 16) {
+                throw new Error('Wrong array length. expected 16');
+            }
+            this.elements = elements.slice(0);
+            return;
+        }
+        this.elements = [1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1];
+    }
+    toString() {
+        return '(' + this.elements.slice(0, 16).map((element) => element.toFixed(3)) + ')';
+    }
+    /**
+     * Set value to specified element of the matrix
+     */
+    set(row, col, value) {
+        if (row > 4 || row < 0 || col > 4 || col < 0) {
+            throw new Error('Incorrect coeficients');
+        }
+        this.elements[row + col * 4] = value;
+    }
+    /**
+     * Return specified element of the matrix
+     */
+    get(row, col) {
+        if (row > 4 || row < 0 || col > 4 || col < 0) {
+            throw new Error('Incorrect coeficients');
+        }
+        return this.elements[row + col * 4];
+    }
+    /**
+     *  Multipy vector to the Matrix
+     */
+    project(position) {
+        const x = this.elements[0] * position.x +
+            this.elements[4] * position.y +
+            this.elements[8] * position.z +
+            this.elements[12];
+        const y = this.elements[1] * position.x +
+            this.elements[5] * position.y +
+            this.elements[9] * position.z +
+            this.elements[13];
+        const z = this.elements[2] * position.x +
+            this.elements[6] * position.y +
+            this.elements[10] * position.z +
+            this.elements[14];
+        return new Vec3(x, y, z);
+    }
+    rotate(axis, angle) {
+        const quat = Quaternion.fromAxisAngle(axis, angle);
+        const x = Transform3D.fromQuaternion(quat);
+        return Transform3D.fromMultiplication(this, x);
+    }
+    /**
+     * Add translational component to current transformation
+     */
+    translate(vec) {
+        const m = this.elements;
+        return new Transform3D([
+            m[0],
+            m[1],
+            m[2],
+            m[3],
+            m[4],
+            m[5],
+            m[6],
+            m[7],
+            m[8],
+            m[9],
+            m[10],
+            m[11],
+            m[12] + vec.x,
+            m[13] + vec.y,
+            m[14] + vec.z,
+            m[15],
+        ]);
+    }
+    /**
+     * Extract translational component of the transformation
+     */
+    extractTranslation() {
+        return new Vec3(this.elements[12], this.elements[13], this.elements[14]);
+    }
+    extractScale() {
+        const m = this.elements;
+        const t = new Transform3D([
+            m[0],
+            m[1],
+            m[2],
+            m[3],
+            m[4],
+            m[5],
+            m[6],
+            m[7],
+            m[8],
+            m[9],
+            m[10],
+            m[11],
+            0,
+            0,
+            0,
+            1,
+        ]);
+        const vec = t.project(new Vec3(1, 1, 1));
+        return vec.length / Math.sqrt(3);
+    }
+    /**
+     * Return Inverse to current transformation (by inverting matrix)
+     * (allow to unproject vectors)
+     */
+    inverse() {
+        let i;
+        const r = new Array(16);
+        const m = this.elements;
+        r[0] =
+            m[5] * m[10] * m[15] -
+                m[5] * m[14] * m[11] -
+                m[6] * m[9] * m[15] +
+                m[6] * m[13] * m[11] +
+                m[7] * m[9] * m[14] -
+                m[7] * m[13] * m[10];
+        r[1] =
+            -m[1] * m[10] * m[15] +
+                m[1] * m[14] * m[11] +
+                m[2] * m[9] * m[15] -
+                m[2] * m[13] * m[11] -
+                m[3] * m[9] * m[14] +
+                m[3] * m[13] * m[10];
+        r[2] =
+            m[1] * m[6] * m[15] -
+                m[1] * m[14] * m[7] -
+                m[2] * m[5] * m[15] +
+                m[2] * m[13] * m[7] +
+                m[3] * m[5] * m[14] -
+                m[3] * m[13] * m[6];
+        r[3] =
+            -m[1] * m[6] * m[11] +
+                m[1] * m[10] * m[7] +
+                m[2] * m[5] * m[11] -
+                m[2] * m[9] * m[7] -
+                m[3] * m[5] * m[10] +
+                m[3] * m[9] * m[6];
+        r[4] =
+            -m[4] * m[10] * m[15] +
+                m[4] * m[14] * m[11] +
+                m[6] * m[8] * m[15] -
+                m[6] * m[12] * m[11] -
+                m[7] * m[8] * m[14] +
+                m[7] * m[12] * m[10];
+        r[5] =
+            m[0] * m[10] * m[15] -
+                m[0] * m[14] * m[11] -
+                m[2] * m[8] * m[15] +
+                m[2] * m[12] * m[11] +
+                m[3] * m[8] * m[14] -
+                m[3] * m[12] * m[10];
+        r[6] =
+            -m[0] * m[6] * m[15] +
+                m[0] * m[14] * m[7] +
+                m[2] * m[4] * m[15] -
+                m[2] * m[12] * m[7] -
+                m[3] * m[4] * m[14] +
+                m[3] * m[12] * m[6];
+        r[7] =
+            m[0] * m[6] * m[11] -
+                m[0] * m[10] * m[7] -
+                m[2] * m[4] * m[11] +
+                m[2] * m[8] * m[7] +
+                m[3] * m[4] * m[10] -
+                m[3] * m[8] * m[6];
+        r[8] =
+            m[4] * m[9] * m[15] -
+                m[4] * m[13] * m[11] -
+                m[5] * m[8] * m[15] +
+                m[5] * m[12] * m[11] +
+                m[7] * m[8] * m[13] -
+                m[7] * m[12] * m[9];
+        r[9] =
+            -m[0] * m[9] * m[15] +
+                m[0] * m[13] * m[11] +
+                m[1] * m[8] * m[15] -
+                m[1] * m[12] * m[11] -
+                m[3] * m[8] * m[13] +
+                m[3] * m[12] * m[9];
+        r[10] =
+            m[0] * m[5] * m[15] -
+                m[0] * m[13] * m[7] -
+                m[1] * m[4] * m[15] +
+                m[1] * m[12] * m[7] +
+                m[3] * m[4] * m[13] -
+                m[3] * m[12] * m[5];
+        r[11] =
+            -m[0] * m[5] * m[11] +
+                m[0] * m[9] * m[7] +
+                m[1] * m[4] * m[11] -
+                m[1] * m[8] * m[7] -
+                m[3] * m[4] * m[9] +
+                m[3] * m[8] * m[5];
+        r[12] =
+            -m[4] * m[9] * m[14] +
+                m[4] * m[13] * m[10] +
+                m[5] * m[8] * m[14] -
+                m[5] * m[12] * m[10] -
+                m[6] * m[8] * m[13] +
+                m[6] * m[12] * m[9];
+        r[13] =
+            m[0] * m[9] * m[14] -
+                m[0] * m[13] * m[10] -
+                m[1] * m[8] * m[14] +
+                m[1] * m[12] * m[10] +
+                m[2] * m[8] * m[13] -
+                m[2] * m[12] * m[9];
+        r[14] =
+            -m[0] * m[5] * m[14] +
+                m[0] * m[13] * m[6] +
+                m[1] * m[4] * m[14] -
+                m[1] * m[12] * m[6] -
+                m[2] * m[4] * m[13] +
+                m[2] * m[12] * m[5];
+        r[15] =
+            m[0] * m[5] * m[10] -
+                m[0] * m[9] * m[6] -
+                m[1] * m[4] * m[10] +
+                m[1] * m[8] * m[6] +
+                m[2] * m[4] * m[9] -
+                m[2] * m[8] * m[5];
+        const det = m[0] * r[0] + m[1] * r[4] + m[2] * r[8] + m[3] * r[12];
+        for (i = 0; i < 16; i++) {
+            r[i] /= det;
+        }
+        return new Transform3D(r);
+    }
+    /**
+     * Return determinant of transformation matrix
+     */
+    determinant() {
+        const value = this.get(0, 3) * this.get(1, 2) * this.get(2, 1) * this.get(3, 0) -
+            this.get(0, 1) * this.get(1, 3) * this.get(2, 1) * this.get(3, 0) -
+            this.get(0, 3) * this.get(1, 1) * this.get(2, 2) * this.get(3, 0) +
+            this.get(0, 1) * this.get(1, 3) * this.get(2, 2) * this.get(3, 0) +
+            this.get(0, 1) * this.get(1, 1) * this.get(2, 3) * this.get(3, 0) -
+            this.get(0, 1) * this.get(1, 2) * this.get(2, 3) * this.get(3, 0) -
+            this.get(0, 3) * this.get(1, 2) * this.get(2, 0) * this.get(3, 1) +
+            this.get(0, 1) * this.get(1, 3) * this.get(2, 0) * this.get(3, 1) +
+            this.get(0, 3) * this.get(1, 0) * this.get(2, 2) * this.get(3, 1) -
+            this.get(0, 0) * this.get(1, 3) * this.get(2, 2) * this.get(3, 1) -
+            this.get(0, 1) * this.get(1, 0) * this.get(2, 3) * this.get(3, 1) +
+            this.get(0, 0) * this.get(1, 2) * this.get(2, 3) * this.get(3, 1) +
+            this.get(0, 3) * this.get(1, 1) * this.get(2, 0) * this.get(3, 2) -
+            this.get(0, 1) * this.get(1, 3) * this.get(2, 0) * this.get(3, 2) -
+            this.get(0, 3) * this.get(1, 0) * this.get(2, 1) * this.get(3, 2) +
+            this.get(0, 0) * this.get(1, 3) * this.get(2, 1) * this.get(3, 2) +
+            this.get(0, 1) * this.get(1, 0) * this.get(2, 3) * this.get(3, 2) -
+            this.get(0, 0) * this.get(1, 1) * this.get(2, 3) * this.get(3, 2) -
+            this.get(0, 1) * this.get(1, 1) * this.get(2, 0) * this.get(3, 3) +
+            this.get(0, 1) * this.get(1, 2) * this.get(2, 0) * this.get(3, 3) +
+            this.get(0, 1) * this.get(1, 0) * this.get(2, 1) * this.get(3, 3) -
+            this.get(0, 0) * this.get(1, 2) * this.get(2, 1) * this.get(3, 3) -
+            this.get(0, 1) * this.get(1, 0) * this.get(2, 2) * this.get(3, 3) +
+            this.get(0, 0) * this.get(1, 1) * this.get(2, 2) * this.get(3, 3);
+        return value;
+    }
+    /**
+     * Clone current transformation
+     */
+    clone() {
+        return new Transform3D(this.elements);
+    }
+    equals(transform) {
+        return Transform3D.equals(this, transform);
+    }
+}
+//# sourceMappingURL=transform3d.js.map

package/dist/transform3d.js.map

@@ -0,0 +1 @@
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package/dist/vec2.d.ts

@@ -1,25 +1,26 @@
-import { ICloneable, IEquatable } from "@chemistry/common";
-export interface IVec2 {
-    x: number;
-    y: number;
-}
-export declare class Vec2 implements IVec2, ICloneable<Vec2>, IEquatable<Vec2> {
-    static add(v1: Vec2, v2: Vec2): Vec2;
-    static sub(v1: Vec2, v2: Vec2): Vec2;
-    static dot(v1: Vec2, v2: Vec2): number;
-    static equals(v1: Vec2, v2: Vec2): boolean;
-    x: number;
-    y: number;
-    constructor(x: number, y: number);
-    readonly length: number;
-    readonly lengthPow2: number;
-    readonly avg: number;
-    scale(num: number): Vec2;
-    normalize(): Vec2;
-    dot(vec: Vec2): number;
-    sub(vec: Vec2): Vec2;
-    add(vector: Vec2): Vec2;
-    equals(vec: Vec2): boolean;
-    clone(): Vec2;
-    toString(): string;
-}
+import { ICloneable, IEquatable } from '@chemistry/common';
+export interface IVec2 {
+    x: number;
+    y: number;
+}
+export declare class Vec2 implements IVec2, ICloneable<Vec2>, IEquatable<Vec2> {
+    static add(v1: Vec2, v2: Vec2): Vec2;
+    static sub(v1: Vec2, v2: Vec2): Vec2;
+    static dot(v1: Vec2, v2: Vec2): number;
+    static equals(v1: Vec2, v2: Vec2): boolean;
+    x: number;
+    y: number;
+    constructor(x: number, y: number);
+    get length(): number;
+    get lengthPow2(): number;
+    get avg(): number;
+    scale(num: number): Vec2;
+    normalize(): Vec2;
+    dot(vec: Vec2): number;
+    sub(vec: Vec2): Vec2;
+    add(vector: Vec2): Vec2;
+    equals(vec: Vec2): boolean;
+    clone(): Vec2;
+    toString(): string;
+}
+//# sourceMappingURL=vec2.d.ts.map

package/dist/vec2.d.ts.map

@@ -0,0 +1 @@
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