@cavelang/cli 0.35.0 → 0.36.0

package/dist/src/doctor.js

@@ -1,15 +1,17 @@
 /** Read-only installation, runtime, and store diagnostics for `cave doctor`. */
 import { existsSync, readFileSync, statSync } from 'node:fs';
+import { readHooks } from "./hooks-config.js";
 import { createRequire } from 'node:module';
 import { dirname, join, parse } from 'node:path';
 import { parseArgs } from 'node:util';
-import { Version } from '@cavelang/core';
+import { Key, Uuidv7, Version } from '@cavelang/core';
+import { emitClaim } from '@cavelang/canonical';
 import { directCommand, runProcessSync } from '@cavelang/cli/loop';
-import { LocateError, Schema, defaultDbPath, kindOf, openText } from '@cavelang/store';
+import { Row, Schema, defaultDbPath, kindOf, openText } from '@cavelang/store';
 import { assemble } from '@cavelang/cli/connect';
 import { nodeSqliteAdapter } from '@cavelang/store/adapter/node';
-const requiredNode = '22.18.0';
-const supportedNodeRange = '^22.18.0 || ^24.0.0 || ^26.0.0';
+const requiredNode = '24.16.0';
+const supportedNodeRange = '^24.16.0 || ^26.1.0';
 const versionParts = (value) => {
     const match = /^(\d+)\.(\d+)\.(\d+)/.exec(value);
     return match === null ? undefined : [Number(match[1]), Number(match[2]), Number(match[3])];
@@ -37,36 +39,42 @@ export const isSupportedNodeVersion = (value) => {
     if (!stableVersion.test(value))
         return false;
     const major = versionParts(value)?.[0];
-    if (major === 22)
+    if (major === 24)
         return atLeast(value, requiredNode);
-    return major === 24 || major === 26;
+    return major === 26 && atLeast(value, '26.1.0');
 };
 const check = (id, status, summary, remediation) => ({ id, status, summary, ...remediation === undefined ? {} : { remediation } });
 const nodeCheck = () => isSupportedNodeVersion(process.versions.node) ?
     check('runtime.node', 'pass', `Node ${process.versions.node} satisfies ${supportedNodeRange}`) :
-    check('runtime.node', 'fail', `Node ${process.versions.node} is unsupported`, `Install Node ${requiredNode}+, Node 24, or Node 26 and rerun cave doctor.`);
+    check('runtime.node', 'fail', `Node ${process.versions.node} is unsupported`, `Install Node 24.16.0+ in the 24.x line or Node 26.1.0+ in the 26.x line and rerun cave doctor.`);
 const sqliteCheck = () => {
     let db;
-    try {
-        db = nodeSqliteAdapter.open(':memory:');
-        db.exec('PRAGMA foreign_keys = ON');
-        const sqlite = db.prepare('SELECT sqlite_version() AS version').get()?.['version'];
-        const json = db.prepare(`SELECT json_valid('{}') AS available`).get()?.['available'];
-        const foreignKeys = db.prepare('PRAGMA foreign_keys').get()?.['foreign_keys'];
-        db.exec('CREATE VIRTUAL TABLE doctor_fts USING fts5(value)');
-        db.exec('DROP TABLE doctor_fts');
-        if (typeof sqlite !== 'string' || json !== 1 || foreignKeys !== 1 ||
-            nodeSqliteAdapter.capabilities.loadExtension === undefined) {
-            throw new Error('capability unavailable');
+    const result = (() => {
+        try {
+            db = nodeSqliteAdapter.open(':memory:');
+            db.exec('PRAGMA foreign_keys = ON');
+            const sqlite = db.prepare('SELECT sqlite_version() AS version').get()?.['version'];
+            const json = db.prepare(`SELECT json_valid('{}') AS available`).get()?.['available'];
+            const foreignKeys = db.prepare('PRAGMA foreign_keys').get()?.['foreign_keys'];
+            db.exec('CREATE VIRTUAL TABLE doctor_fts USING fts5(value)');
+            db.exec('DROP TABLE doctor_fts');
+            if (typeof sqlite !== 'string' || json !== 1 || foreignKeys !== 1 ||
+                nodeSqliteAdapter.capabilities.loadExtension === undefined) {
+                throw new Error('capability unavailable');
+            }
+            return check('runtime.sqlite', 'pass', `SQLite ${sqlite} supports FTS5, JSON functions, foreign keys, and extension loading`);
+        }
+        catch {
+            return check('runtime.sqlite', 'fail', 'The Node SQLite runtime lacks a required capability', `Use an official Node ${requiredNode}+ build with SQLite FTS5 and JSON support.`);
         }
-        return check('runtime.sqlite', 'pass', `SQLite ${sqlite} supports FTS5, JSON functions, foreign keys, and extension loading`);
+    })();
+    try {
+        db?.close();
     }
     catch {
-        return check('runtime.sqlite', 'fail', 'The Node SQLite runtime lacks a required capability', `Use an official Node ${requiredNode}+ build with SQLite FTS5 and JSON support.`);
-    }
-    finally {
-        db?.close();
+        return [result, check('runtime.sqlite.cleanup', 'fail', 'The SQLite capability probe could not be closed cleanly', 'Retry diagnosis in a new process.')];
     }
+    return [result];
 };
 const grammarCheck = () => {
     try {
@@ -138,6 +146,18 @@ const pnpmCheck = () => {
     }
     return check('workspace.pnpm', 'pass', `pnpm ${actual} satisfies the workspace requirement`);
 };
+const finishDatabaseInspection = (result, close) => {
+    try {
+        close();
+    }
+    catch {
+        return {
+            ...result,
+            checks: [...result.checks, check('store.cleanup', 'fail', 'The database connection could not be closed cleanly', 'Retry diagnosis in a new process; cave doctor made no repairs.')]
+        };
+    }
+    return result;
+};
 const inspectDatabase = (path, source) => {
     const memory = path === ':memory:';
     const exists = memory || existsSync(path);
@@ -152,89 +172,150 @@ const inspectDatabase = (path, source) => {
         // A CAVE text file is a read-only store assembled in memory (spec
         // §13.7, §23.4): replay it, sources included, and count what it holds.
         const configuration = { ...base, kind: 'text' };
-        try {
-            const store = openText(path, { assemble });
+        let store;
+        const result = (() => {
             try {
+                store = openText(path, { assemble });
                 const claims = store.currentBeliefs().filter(row => row.conf > 0).length;
                 return {
                     configuration: { ...configuration, claims },
                     checks: [check('store.database', 'pass', `CAVE text store assembled in memory (${claims} current claim(s)); text stores are read-only`)]
                 };
             }
-            finally {
-                store.close();
+            catch {
+                return {
+                    configuration,
+                    checks: [check('store.database', 'fail', 'The CAVE text store or one of its declared sources could not be loaded', 'Fix the file (cave parse) or the source it declares; a text store is read-only.')]
+                };
             }
-        }
-        catch (error) {
-            return {
-                configuration,
-                checks: [check('store.database', 'fail', `The CAVE text store does not load: ${error instanceof LocateError ? error.message.split('\n')[0] : error instanceof Error ? error.message : String(error)}`, 'Fix the file (cave parse) or the source it declares; a text store is read-only.')]
-            };
-        }
+        })();
+        return finishDatabaseInspection(result, () => store?.close());
     }
     let db;
     let observed = base;
-    try {
-        db = nodeSqliteAdapter.open(path, { readOnly: true });
-        const version = db.prepare('PRAGMA user_version').get()?.['user_version'];
-        if (typeof version !== 'number')
-            throw new Error('invalid version');
-        const caveObjects = db.prepare(`SELECT count(*) AS count FROM sqlite_schema WHERE name LIKE 'cave_%' OR name LIKE 'idx_cave_%'`).get()?.['count'];
-        const configuration = { ...base, schemaVersion: version };
-        observed = configuration;
-        if (version > Schema.currentVersion) {
-            return {
-                configuration,
-                checks: [check('store.database', 'fail', `Database schema ${version} is newer than supported schema ${Schema.currentVersion}`, 'Upgrade CAVE before opening this database.')]
-            };
-        }
-        if (version === 0 && caveObjects === 0) {
-            return {
-                configuration,
-                checks: [check('store.database', 'warn', 'The database is readable but is not initialized as a CAVE store', 'Run cave add to initialize it; cave doctor made no changes.')]
-            };
-        }
-        if (version < Schema.currentVersion) {
-            return {
-                configuration,
-                checks: [check('store.database', 'warn', `Database schema ${version} needs migration to schema ${Schema.currentVersion}`, 'Close every user and copy the database file as a rollback point, then open it with a writing command such as cave add to migrate it; reads never migrate.')]
-            };
-        }
-        Schema.validate(db, version);
-        const integrity = db.prepare('PRAGMA integrity_check').all();
-        if (integrity.length !== 1 || integrity[0]?.['integrity_check'] !== 'ok') {
+    const result = (() => {
+        try {
+            db = nodeSqliteAdapter.open(path, { readOnly: true });
+            // Keep schema, integrity, row and search diagnostics on one read snapshot.
+            // Closing the owned connection releases this read-only transaction.
+            db.exec('BEGIN');
+            const version = db.prepare('PRAGMA user_version').get()?.['user_version'];
+            if (typeof version !== 'number')
+                throw new Error('invalid version');
+            const caveObjects = db.prepare(`SELECT count(*) AS count FROM sqlite_schema WHERE name LIKE 'cave!_%' ESCAPE '!' OR name LIKE 'idx!_cave!_%' ESCAPE '!'`).get()?.['count'];
+            const configuration = { ...base, schemaVersion: version };
+            observed = configuration;
+            if (version > Schema.currentVersion) {
+                return {
+                    configuration,
+                    checks: [check('store.database', 'fail', `Database schema ${version} is newer than supported schema ${Schema.currentVersion}`, 'Upgrade CAVE before opening this database.')]
+                };
+            }
+            if (version === 0 && caveObjects === 0) {
+                return {
+                    configuration,
+                    checks: [check('store.database', 'warn', 'The database is readable but is not initialized as a CAVE store', 'Run cave add to initialize it; cave doctor made no changes.')]
+                };
+            }
+            if (version < Schema.currentVersion) {
+                return {
+                    configuration,
+                    checks: [check('store.database', 'warn', `Database schema ${version} needs migration to schema ${Schema.currentVersion}`, 'Close every user and copy the database file as a rollback point, then open it with a writing command such as cave add to migrate it; reads never migrate.')]
+                };
+            }
+            Schema.validate(db, version);
+            const integrity = db.prepare('PRAGMA integrity_check').all();
+            if (integrity.length !== 1 || integrity[0]?.['integrity_check'] !== 'ok') {
+                return {
+                    configuration,
+                    checks: [check('store.integrity', 'fail', 'SQLite integrity checking failed', 'Restore a verified backup or recover the database with SQLite tooling.')]
+                };
+            }
+            const foreignKeys = db.prepare('PRAGMA foreign_key_check').all();
+            if (foreignKeys.length > 0) {
+                return {
+                    configuration,
+                    checks: [check('store.integrity', 'fail', 'The store contains broken foreign-key references', 'Restore a verified backup or repair the affected database rows.')]
+                };
+            }
+            const claims = db.prepare('SELECT count(*) AS count FROM cave_claim').get()?.['count'];
+            if (typeof claims !== 'number')
+                throw new Error('invalid count');
+            let invalidRows = db.prepare(`SELECT EXISTS (
+        SELECT 1 FROM cave_claim WHERE negated NOT IN (0, 1) OR importance NOT IN (0, 1)
+          OR value_approx NOT IN (0, 1)
+          OR (object IS NOT NULL AND (attribute IS NOT NULL OR value_text IS NOT NULL))
+          OR (attribute IS NOT NULL AND value_text IS NULL)
+          OR typeof(conf) NOT IN ('integer', 'real') OR conf NOT BETWEEN 0 AND 1
+          OR (sigma_level IS NOT NULL AND (typeof(sigma_level) NOT IN ('integer', 'real')
+            OR NOT (sigma_level > 0 AND sigma_level <= ?)))
+      ) OR EXISTS (
+        SELECT 1 FROM cave_provenance WHERE typeof(value) <> 'text' OR value = ''
+      ) OR EXISTS (
+        SELECT 1 FROM cave_edge WHERE role IS NULL OR role NOT IN ('WHEN', 'VIA', 'BECAUSE', 'QUALIFIES')
+      ) AS invalid`).get(Number.MAX_VALUE)?.['invalid'];
+            if (typeof invalidRows !== 'number')
+                throw new Error('invalid row check');
+            if (invalidRows === 0) {
+                // Stream stored history without collecting rows; projections must agree with
+                // authored values even when a SQL filter would otherwise hide the row.
+                // This connection is owned by nodeSqliteAdapter, which returns native statements.
+                const rows = db.prepare('SELECT * FROM cave_claim');
+                const contexts = db.prepare('SELECT context FROM cave_context WHERE claim_id = ?');
+                const tags = db.prepare('SELECT key, value FROM cave_tag WHERE claim_id = ?');
+                for (const row of rows.iterate()) {
+                    if (typeof row.id !== 'string' || !Uuidv7.is(row.id) || row.tx !== row.id) {
+                        invalidRows = 1;
+                        break;
+                    }
+                    try {
+                        const claim = Row.toClaim(row, contexts.all(row.id).map(entry => entry.context), tags.all(row.id));
+                        emitClaim(claim);
+                        if (Key.of(claim) !== row.claim_key) {
+                            invalidRows = 1;
+                            break;
+                        }
+                    }
+                    catch {
+                        invalidRows = 1;
+                        break;
+                    }
+                }
+            }
+            // SQLite's integrity_check cannot tell whether the separate FTS content
+            // still represents the claims. Compare one snapshot, including counts so
+            // duplicate entries cannot disappear under EXCEPT's set semantics.
+            const searchColumns = 'subject, verb, object, attribute, value_text, comment, raw_line';
+            const searchMismatch = db.prepare(`SELECT
+        (SELECT count(*) FROM cave_claim) <> (SELECT count(*) FROM cave_fts)
+        OR EXISTS (
+          SELECT id, ${searchColumns} FROM cave_claim
+          EXCEPT SELECT claim_id, ${searchColumns} FROM cave_fts
+        ) AS mismatch`).get()?.['mismatch'];
+            if (typeof searchMismatch !== 'number')
+                throw new Error('invalid search check');
             return {
-                configuration,
-                checks: [check('store.integrity', 'fail', 'SQLite integrity checking failed', 'Restore a verified backup or recover the database with SQLite tooling.')]
+                configuration: { ...configuration, claims },
+                checks: [
+                    check('store.database', 'pass', `CAVE schema ${version} is compatible (${claims} claim(s))`),
+                    check('store.integrity', 'pass', 'SQLite integrity and foreign-key checks passed'),
+                    invalidRows === 0 ?
+                        check('store.rows', 'pass', 'Stored payloads, provenance, flags, confidence and sigma levels are valid') :
+                        check('store.rows', 'fail', 'Stored claims contain invalid transaction identities, claim keys, terms, tags, edge roles, payload columns, provenance values, boolean flags, confidence, sigma levels, authored values or numeric caches', 'Restore a verified backup or repair the affected stored rows before exporting; cave doctor made no changes.'),
+                    searchMismatch === 0 ?
+                        check('store.search', 'pass', 'Search entries match the stored claims') :
+                        check('store.search', 'fail', 'Search entries are missing, duplicated, orphaned, or stale', 'Restore a verified backup or rebuild the search index from the stored claims with SQLite tooling; cave doctor made no changes.')
+                ]
             };
         }
-        const foreignKeys = db.prepare('PRAGMA foreign_key_check').all();
-        if (foreignKeys.length > 0) {
+        catch {
             return {
-                configuration,
-                checks: [check('store.integrity', 'fail', 'The store contains broken foreign-key references', 'Restore a verified backup or repair the affected database rows.')]
+                configuration: observed,
+                checks: [check('store.database', 'fail', 'The configured database is unreadable or has an incompatible schema', 'Check file permissions, restore a verified backup, or pass --db for another store.')]
             };
         }
-        const claims = db.prepare('SELECT count(*) AS count FROM cave_claim').get()?.['count'];
-        if (typeof claims !== 'number')
-            throw new Error('invalid count');
-        return {
-            configuration: { ...configuration, claims },
-            checks: [
-                check('store.database', 'pass', `CAVE schema ${version} is compatible (${claims} claim(s))`),
-                check('store.integrity', 'pass', 'SQLite integrity and foreign-key checks passed')
-            ]
-        };
-    }
-    catch {
-        return {
-            configuration: observed,
-            checks: [check('store.database', 'fail', 'The configured database is unreadable or has an incompatible schema', 'Check file permissions, restore a verified backup, or pass --db for another store.')]
-        };
-    }
-    finally {
-        db?.close();
-    }
+    })();
+    return finishDatabaseInspection(result, () => db?.close());
 };
 const inspectHooks = (path) => {
     if (path === undefined) {
@@ -247,17 +328,11 @@ const inspectHooks = (path) => {
     if (!configuration.exists) {
         return {
             configuration,
-            check: check('config.hooks', 'fail', 'The configured hooks file does not exist', 'Create a JSON object of hook names to shell command strings, or omit --hooks.')
+            check: check('config.hooks', 'fail', 'The configured hooks file does not exist', 'Create a UTF-8 JSON object with nonblank hook names and Unicode shell command strings, or omit --hooks.')
         };
     }
     try {
-        const parsed = JSON.parse(readFileSync(path, 'utf8'));
-        if (typeof parsed !== 'object' || parsed === null || Array.isArray(parsed))
-            throw new Error('invalid');
-        const entries = Object.entries(parsed);
-        if (entries.some(([name, command]) => name.trim() === '' || typeof command !== 'string')) {
-            throw new Error('invalid');
-        }
+        const entries = Object.entries(readHooks(path));
         return {
             configuration: { ...configuration, entries: entries.length },
             check: check('config.hooks', 'pass', `Hooks configuration is valid (${entries.length} entr${entries.length === 1 ? 'y' : 'ies'})`)
@@ -266,19 +341,20 @@ const inspectHooks = (path) => {
     catch {
         return {
             configuration,
-            check: check('config.hooks', 'fail', 'The configured hooks file is unreadable or malformed', 'Use a JSON object whose values are shell command strings.')
+            check: check('config.hooks', 'fail', 'The configured hooks file is unreadable or malformed', 'Use valid UTF-8 JSON with nonblank hook names and string commands; names and commands must have no unpaired Unicode surrogates.')
         };
     }
 };
 export const diagnose = (options = {}) => {
-    const databasePath = options.db ?? defaultDbPath();
-    const databaseSource = options.db !== undefined ? 'flag' :
+    const configuredDb = options.db, configuredHooks = options.hooks;
+    const databasePath = configuredDb ?? defaultDbPath();
+    const databaseSource = configuredDb !== undefined ? 'flag' :
         process.env['CAVE_DB'] !== undefined ? 'environment' : 'default';
     const database = inspectDatabase(databasePath, databaseSource);
-    const hooks = inspectHooks(options.hooks);
+    const hooks = inspectHooks(configuredHooks);
     const checks = [
         nodeCheck(),
-        sqliteCheck(),
+        ...sqliteCheck(),
         grammarCheck(),
         pnpmCheck(),
         ...database.checks,

package/dist/src/doctor.js.map

@@ -1 +1 @@
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package/dist/src/error-message.d.ts

@@ -0,0 +1,3 @@
+/** Formatting an exception must not replace the failure being reported. */
+export declare const errorMessage: (error: unknown, debug?: boolean) => string;
+//# sourceMappingURL=error-message.d.ts.map

package/dist/src/error-message.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"error-message.d.ts","sourceRoot":"","sources":["../../src/error-message.ts"],"names":[],"mappings":"AAAA,2EAA2E;AAC3E,eAAO,MAAM,YAAY,GAAI,OAAO,OAAO,EAAE,eAAa,KAAG,MAW5D,CAAA"}

package/dist/src/error-message.js

@@ -0,0 +1,20 @@
+/** Formatting an exception must not replace the failure being reported. */
+export const errorMessage = (error, debug = false) => {
+    if (debug) {
+        try {
+            if (error instanceof Error) {
+                const stack = error.stack;
+                if (stack !== undefined)
+                    return String(stack);
+            }
+        }
+        catch { /* An unavailable stack can still have a useful message. */ }
+    }
+    try {
+        return error instanceof Error ? String(error.message) : String(error);
+    }
+    catch {
+        return '[unprintable thrown value]';
+    }
+};
+//# sourceMappingURL=error-message.js.map

package/dist/src/error-message.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"error-message.js","sourceRoot":"","sources":["../../src/error-message.ts"],"names":[],"mappings":"AAAA,2EAA2E;AAC3E,MAAM,CAAC,MAAM,YAAY,GAAG,CAAC,KAAc,EAAE,KAAK,GAAG,KAAK,EAAU,EAAE;IACpE,IAAI,KAAK,EAAE,CAAC;QACV,IAAI,CAAC;YACH,IAAI,KAAK,YAAY,KAAK,EAAE,CAAC;gBAC3B,MAAM,KAAK,GAAG,KAAK,CAAC,KAAK,CAAA;gBACzB,IAAI,KAAK,KAAK,SAAS;oBAAE,OAAO,MAAM,CAAC,KAAK,CAAC,CAAA;YAC/C,CAAC;QACH,CAAC;QAAC,MAAM,CAAC,CAAC,2DAA2D,CAAC,CAAC;IACzE,CAAC;IACD,IAAI,CAAC;QAAC,OAAO,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAA;IAAC,CAAC;IAC7E,MAAM,CAAC;QAAC,OAAO,4BAA4B,CAAA;IAAC,CAAC;AAC/C,CAAC,CAAA"}

package/dist/src/hooks-config.d.ts

@@ -0,0 +1,3 @@
+/** One configuration contract for execution and redacted doctor diagnostics. */
+export declare const readHooks: (path: string) => Record<string, string>;
+//# sourceMappingURL=hooks-config.d.ts.map

package/dist/src/hooks-config.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"hooks-config.d.ts","sourceRoot":"","sources":["../../src/hooks-config.ts"],"names":[],"mappings":"AAEA,gFAAgF;AAChF,eAAO,MAAM,SAAS,GAAI,MAAM,MAAM,KAAG,MAAM,CAAC,MAAM,EAAE,MAAM,CAkB7D,CAAA"}

package/dist/src/hooks-config.js

@@ -0,0 +1,23 @@
+import { readFileSync } from 'node:fs';
+/** One configuration contract for execution and redacted doctor diagnostics. */
+export const readHooks = (path) => {
+    const bytes = readFileSync(path);
+    let text;
+    try {
+        text = new TextDecoder('utf-8', { fatal: true, ignoreBOM: true }).decode(bytes);
+    }
+    catch (cause) {
+        throw new TypeError(`${path}: invalid UTF-8 hooks configuration`, { cause });
+    }
+    const parsed = JSON.parse(text);
+    if (typeof parsed !== 'object' || parsed === null || Array.isArray(parsed) ||
+        Object.entries(parsed).some(([name, command]) => name.trim() === '' || typeof command !== 'string')) {
+        throw new Error(`${path}: hooks must be a JSON object of nonblank names to shell template strings`);
+    }
+    const hooks = parsed;
+    if (Object.entries(hooks).some(([name, command]) => /[\uD800-\uDFFF]/u.test(name) || /[\uD800-\uDFFF]/u.test(command))) {
+        throw new Error(`${path}: hook names and commands must contain well-formed Unicode`);
+    }
+    return hooks;
+};
+//# sourceMappingURL=hooks-config.js.map

package/dist/src/hooks-config.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"hooks-config.js","sourceRoot":"","sources":["../../src/hooks-config.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,MAAM,SAAS,CAAA;AAEtC,gFAAgF;AAChF,MAAM,CAAC,MAAM,SAAS,GAAG,CAAC,IAAY,EAA0B,EAAE;IAChE,MAAM,KAAK,GAAG,YAAY,CAAC,IAAI,CAAC,CAAA;IAChC,IAAI,IAAY,CAAA;IAChB,IAAI,CAAC;QACH,IAAI,GAAG,IAAI,WAAW,CAAC,OAAO,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAA;IACjF,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,MAAM,IAAI,SAAS,CAAC,GAAG,IAAI,qCAAqC,EAAE,EAAE,KAAK,EAAE,CAAC,CAAA;IAC9E,CAAC;IACD,MAAM,MAAM,GAAY,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;IACxC,IAAI,OAAO,MAAM,KAAK,QAAQ,IAAI,MAAM,KAAK,IAAI,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC;QACtE,MAAM,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,EAAE,OAAO,CAAC,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,EAAE,KAAK,EAAE,IAAI,OAAO,OAAO,KAAK,QAAQ,CAAC,EAAE,CAAC;QACxG,MAAM,IAAI,KAAK,CAAC,GAAG,IAAI,2EAA2E,CAAC,CAAA;IACrG,CAAC;IACD,MAAM,KAAK,GAAG,MAAgC,CAAA;IAC9C,IAAI,MAAM,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,EAAE,OAAO,CAAC,EAAE,EAAE,CAAC,kBAAkB,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,kBAAkB,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,EAAE,CAAC;QACvH,MAAM,IAAI,KAAK,CAAC,GAAG,IAAI,4DAA4D,CAAC,CAAA;IACtF,CAAC;IACD,OAAO,KAAK,CAAA;AACd,CAAC,CAAA"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cavelang/cli",
-  "version": "0.35.0",
+  "version": "0.36.0",
   "type": "module",
   "description": "cave — CLI for parsing, storing, querying and exporting CAVE knowledge.",
   "keywords": [
@@ -21,7 +21,7 @@
     "directory": "packages/cli"
   },
   "engines": {
-    "node": "^22.18.0 || ^24.0.0 || ^26.0.0"
+    "node": "^24.16.0 || ^26.1.0"
   },
   "bin": {
     "cave": "./dist/src/main.js"
@@ -97,26 +97,29 @@
     "@modelcontextprotocol/server": "2.0.0",
     "@mozilla/readability": "^0.6.0",
     "linkedom": "^0.18.13",
-    "@cavelang/canonical": "0.35.0",
-    "@cavelang/fusion": "0.35.0",
-    "@cavelang/core": "0.35.0",
-    "@cavelang/highlight": "0.35.0",
-    "@cavelang/parser": "0.35.0",
-    "@cavelang/query": "0.35.0",
-    "@cavelang/store": "0.35.0"
+    "mdast-util-from-markdown": "2.0.3",
+    "mdast-util-gfm-footnote": "2.1.0",
+    "micromark-extension-gfm-footnote": "2.1.0",
+    "@cavelang/canonical": "0.36.0",
+    "@cavelang/core": "0.36.0",
+    "@cavelang/fusion": "0.36.0",
+    "@cavelang/highlight": "0.36.0",
+    "@cavelang/query": "0.36.0",
+    "@cavelang/store": "0.36.0",
+    "@cavelang/parser": "0.36.0"
   },
   "devDependencies": {
-    "@cavelang/act": "0.35.0",
-    "@cavelang/automate": "0.35.0",
-    "@cavelang/eval": "0.35.0",
-    "@cavelang/connect": "0.35.0",
-    "@cavelang/ingest": "0.35.0",
-    "@cavelang/loop": "0.35.0",
-    "@cavelang/rules": "0.35.0",
-    "@cavelang/shape": "0.35.0",
-    "@cavelang/mcp": "0.35.0",
-    "@cavelang/sync": "0.35.0",
-    "@cavelang/view": "0.35.0"
+    "@cavelang/act": "0.36.0",
+    "@cavelang/automate": "0.36.0",
+    "@cavelang/eval": "0.36.0",
+    "@cavelang/ingest": "0.36.0",
+    "@cavelang/loop": "0.36.0",
+    "@cavelang/mcp": "0.36.0",
+    "@cavelang/connect": "0.36.0",
+    "@cavelang/shape": "0.36.0",
+    "@cavelang/sync": "0.36.0",
+    "@cavelang/rules": "0.36.0",
+    "@cavelang/view": "0.36.0"
   },
   "scripts": {
     "build": "tsc -b && node scripts/consolidate.mjs",

package/src/atomic-output.ts

@@ -0,0 +1,47 @@
+import fs from 'node:fs'
+import { dirname, join, resolve } from 'node:path'
+import { errorMessage } from './error-message.ts'
+
+/** Publish complete text; failures before rename leave the destination intact. */
+export const writeOutput = (path: string, text: string): void => {
+  let target = resolve(path)
+  let mode: number | undefined
+  let entry: fs.Stats | undefined
+  try { entry = fs.lstatSync(target) } catch (error) {
+    if ((error as NodeJS.ErrnoException).code !== 'ENOENT') throw error
+  }
+  if (entry !== undefined) {
+    // Follow existing symlinks without replacing the link itself. A dangling
+    // link fails resolution rather than publishing over an unexpected path.
+    if (entry.isSymbolicLink()) target = fs.realpathSync(target)
+    const stat = fs.statSync(target)
+    if (!stat.isFile()) throw new Error(`output destination is not a regular file: ${path}`)
+    fs.accessSync(target, fs.constants.W_OK)
+    mode = stat.mode & 0o777
+  }
+  const directory = fs.mkdtempSync(join(dirname(target), '.cave-export-'))
+  const temporary = join(directory, 'output')
+  const errors: unknown[] = []
+  let published = false
+  try {
+    const fd = fs.openSync(temporary, 'wx', mode ?? 0o666)
+    try {
+      fs.writeFileSync(fd, text)
+      if (mode !== undefined) fs.fchmodSync(fd, mode)
+      fs.fsyncSync(fd)
+    } catch (error) { errors.push(error) }
+    try { fs.closeSync(fd) } catch (error) { errors.push(error) }
+    if (errors.length === 0) {
+      fs.renameSync(temporary, target)
+      published = true
+    }
+  } catch (error) { errors.push(error) }
+  try { fs.rmSync(directory, { recursive: true, force: true }) } catch (error) {
+    errors.push(published ? new Error(
+      `output published to ${target}, but temporary directory cleanup failed: ${directory}: ${errorMessage(error)}`,
+      { cause: error }) : error)
+  }
+  if (errors.length === 1) throw errors[0]
+  if (errors.length > 1) throw new AggregateError(errors,
+    `file output failed: ${errors.map(error => errorMessage(error)).join('; ')}`, { cause: errors[0] })
+}