@cavelang/cli 0.34.0 → 0.36.0

package/dist/internal/ingest/main.js

@@ -3,9 +3,13 @@
  * `run.ts`. See the package README for agent recipes (Claude Code,
  * Copilot CLI, SDK scripts).
  */
+import { errorMessage } from "./error-message.js";
+import { sourceLabel } from "./content.js";
+import { agentTimeoutMs } from "./timeout.js";
 import { parseArgs } from 'node:util';
 import { Registry } from '@cavelang/canonical';
 import { LocateError, defaultDbPath, kindOf, open, openAt } from '@cavelang/store';
+import { assemble } from '@cavelang/cli/connect';
 import { promptFor, run, selectBatches, writeMcpConfig } from "./run.js";
 const usage = `cave ingest — LLM-driven ingestion of files and web pages
 
@@ -31,6 +35,7 @@ Options:
   --lenient              commit accepted batches and continue after failures;
                          default strict mode stages and commits the whole run
   --json                 print the complete machine-readable result manifest
+                         (execution only; cannot combine with --plan/--dry-run)
   --timeout <seconds>    per-batch agent timeout (default 600)
   --plan                 print batches as NDJSON and exit (drive with an SDK)
   --dry-run              print the plan and the first prompt, run nothing
@@ -46,7 +51,8 @@ Examples:
 export const runIngest = async (argv, context = {}) => {
     const stdout = context.stdout ?? process.stdout;
     const stderr = context.stderr ?? process.stderr;
-    context.signal?.throwIfAborted();
+    const signal = context.signal;
+    signal?.throwIfAborted();
     const { values, positionals } = parseArgs({
         args: [...argv],
         options: {
@@ -77,19 +83,28 @@ export const runIngest = async (argv, context = {}) => {
     }
     const db = values.db ?? defaultDbPath();
     const planning = values.plan === true || values['dry-run'] === true;
+    if (planning && values.json === true) {
+        stderr.write('cave ingest: --json cannot be combined with --plan or --dry-run; use --plan for machine-readable planning\n');
+        return 1;
+    }
     if (values.agent === undefined && !planning) {
         stderr.write('cave ingest: --agent is required (or use --plan / --dry-run)\n');
         return 1;
     }
     const batchSize = values.batch === undefined ? undefined : Number(values.batch);
-    if (batchSize !== undefined && (!Number.isInteger(batchSize) || batchSize < 1)) {
-        stderr.write(`cave ingest: --batch must be a positive integer, got '${values.batch}'\n`);
+    if (batchSize !== undefined && (!Number.isSafeInteger(batchSize) || batchSize < 1)) {
+        stderr.write(`cave ingest: --batch must be a positive safe integer, got '${values.batch}'\n`);
         return 1;
     }
     const timeoutSeconds = values.timeout === undefined ? undefined : Number(values.timeout);
-    if (timeoutSeconds !== undefined && (!Number.isFinite(timeoutSeconds) || timeoutSeconds <= 0)) {
-        stderr.write(`cave ingest: --timeout must be a positive number of seconds, got '${values.timeout}'\n`);
-        return 1;
+    if (timeoutSeconds !== undefined) {
+        try {
+            agentTimeoutMs(timeoutSeconds);
+        }
+        catch (error) {
+            stderr.write(`cave ingest: --${errorMessage(error)}, got '${values.timeout}'\n`);
+            return 1;
+        }
     }
     const noPrelude = values['no-prelude'] === true;
     const registry = noPrelude ? { registry: Registry.empty } : {};
@@ -101,7 +116,7 @@ export const runIngest = async (argv, context = {}) => {
     try {
         store = !planning ? openAt(db, { intent: 'write', ...registry }) :
             kindOf(db) === 'missing' ? open(':memory:', registry) :
-                openAt(db, { intent: 'read', ...registry });
+                openAt(db, { intent: 'read', assemble, ...registry });
     }
     catch (error) {
         if (!(error instanceof LocateError))
@@ -109,7 +124,7 @@ export const runIngest = async (argv, context = {}) => {
         stderr.write(`cave ingest: ${error.message}\n`);
         return 1;
     }
-    try {
+    const execute = async () => {
         const options = {
             db,
             patterns: positionals,
@@ -123,12 +138,12 @@ export const runIngest = async (argv, context = {}) => {
             force: values.force === true,
             policy: values.lenient === true ? 'lenient' : 'strict',
             noPrelude,
-            ...context.signal === undefined ? {} : { signal: context.signal }
+            ...signal === undefined ? {} : { signal }
         };
         if (planning) {
             const { selection, batches } = await selectBatches(store, options);
             if (values.plan === true) {
-                const mcpConfig = writeMcpConfig(db, { noPrelude });
+                let mcpConfig;
                 for (const failure of selection.failures) {
                     stdout.write(`${JSON.stringify({
                         source: failure.path,
@@ -141,6 +156,7 @@ export const runIngest = async (argv, context = {}) => {
                 }
                 for (const files of batches) {
                     const prompt = promptFor(store, files, options);
+                    mcpConfig ??= writeMcpConfig(db, { noPrelude });
                     stdout.write(`${JSON.stringify({ files: files.map(file => file.path), prompt, mcpConfig, db })}\n`);
                 }
                 return 0;
@@ -148,15 +164,15 @@ export const runIngest = async (argv, context = {}) => {
             stdout.write([
                 `ingest plan: ${selection.files.length} source(s) in ${batches.length} batch(es), ` +
                     `${selection.skipped.length} skipped (unchanged), ${selection.failures.length} rejected`,
-                ...selection.skipped.map(path => `  skip ${path}`),
-                ...selection.failures.map(failure => `  reject ${failure.path}: ${failure.kind}, ${failure.retryable ? 'retryable' : 'permanent'} — ${failure.message}`),
-                ...batches.map((files, index) => `  batch ${index + 1}: ${files.map(file => file.path).join(', ')}`),
+                ...selection.skipped.map(path => `  skip ${sourceLabel(path)}`),
+                ...selection.failures.map(failure => `  reject ${sourceLabel(failure.path)}: ${failure.kind}, ${failure.retryable ? 'retryable' : 'permanent'} — ${failure.message}`),
+                ...batches.map((files, index) => `  batch ${index + 1}: ${files.map(file => sourceLabel(file.path)).join(', ')}`),
                 ...batches.length > 0 ? ['', '--- prompt for batch 1 ---', promptFor(store, batches[0], options)] : []
             ].join('\n') + '\n');
             return 0;
         }
         const report = await run(options);
-        context.signal?.throwIfAborted();
+        signal?.throwIfAborted();
         const failed = report.failed > 0 || report.sources.some(source => source.status === 'not-run');
         if (values.json === true) {
             stdout.write(`${JSON.stringify(report, undefined, 2)}\n`);
@@ -166,6 +182,9 @@ export const runIngest = async (argv, context = {}) => {
             `ingest (${report.policy}): ${report.matched} source(s) matched, ${report.skipped.length} skipped (unchanged), ` +
                 `${report.batches.length} batch(es), ${report.applied ? 'applied' : 'not applied'}`
         ];
+        if (report.policy === 'strict' && !report.applied) {
+            lines.push('strict run discarded: no staged claims or source digests were applied');
+        }
         report.batches.forEach((batch, index) => {
             const status = batch.ok ? `+${batch.added} claim(s)` : `FAILED${batch.note === undefined ? '' : ` — ${batch.note}`}`;
             lines.push(`batch ${index + 1}/${report.batches.length} (${batch.files.length} file(s)): ${status}`);
@@ -185,14 +204,26 @@ export const runIngest = async (argv, context = {}) => {
                         (source.httpStatus === undefined ? '' : ` HTTP ${source.httpStatus}`),
                 ...source.problems
             ].filter((value) => value !== undefined).join('; ');
-            lines.push(`source ${source.status}: ${source.path}${detail === '' ? '' : ` — ${detail}`}`);
+            lines.push(`source ${source.status}: ${sourceLabel(source.path)}${detail === '' ? '' : ` — ${detail}`}`);
         }
         lines.push(`done: +${report.added} claim(s)${report.failed > 0 ? `, ${report.failed} failed outcome(s)` : ''}`);
         stdout.write(`${lines.join('\n')}\n`);
         return failed ? 1 : 0;
+    };
+    let code;
+    try {
+        code = await execute();
     }
-    finally {
-        store.close();
+    catch (error) {
+        try {
+            store.close();
+        }
+        catch (closeError) {
+            throw new AggregateError([error, closeError], `${errorMessage(error)}; store close also failed: ${errorMessage(closeError)}`, { cause: error });
+        }
+        throw error;
     }
+    store.close();
+    return code;
 };
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package/dist/internal/ingest/options.d.ts

@@ -0,0 +1,6 @@
+export declare const booleanOption: (value: unknown, name: string) => boolean;
+/** Filesystem and URL paths must not be silently repaired during encoding. */
+export declare const sourcePath: (value: string, name: string) => string;
+/** Capture and validate the whole source list before any selection work. */
+export declare const sourceList: (input: readonly string[], name: string) => string[];
+//# sourceMappingURL=options.d.ts.map

package/dist/internal/ingest/options.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"options.d.ts","sourceRoot":"","sources":["../../src/options.ts"],"names":[],"mappings":"AAAA,eAAO,MAAM,aAAa,GAAI,OAAO,OAAO,EAAE,MAAM,MAAM,KAAG,OAI5D,CAAA;AAGD,8EAA8E;AAC9E,eAAO,MAAM,UAAU,GAAI,OAAO,MAAM,EAAE,MAAM,MAAM,KAAG,MAIxD,CAAA;AAED,4EAA4E;AAC5E,eAAO,MAAM,UAAU,GAAI,OAAO,SAAS,MAAM,EAAE,EAAE,MAAM,MAAM,KAAG,MAAM,EAMzE,CAAA"}

package/dist/internal/ingest/options.js

@@ -0,0 +1,27 @@
+export const booleanOption = (value, name) => {
+    if (value === undefined)
+        return false;
+    if (typeof value !== 'boolean')
+        throw new TypeError(`${name} must be a boolean`);
+    return value;
+};
+/** Filesystem and URL paths must not be silently repaired during encoding. */
+export const sourcePath = (value, name) => {
+    if (typeof value !== 'string')
+        throw new TypeError(`${name} must be a string`);
+    if (/[\uD800-\uDFFF]/u.test(value))
+        throw new TypeError(`${name} must contain well-formed Unicode`);
+    return value;
+};
+/** Capture and validate the whole source list before any selection work. */
+export const sourceList = (input, name) => {
+    if (!Array.isArray(input))
+        throw new TypeError(`${name} must be an array of strings`);
+    const values = Array.from(input);
+    if (values.some(value => typeof value !== 'string'))
+        throw new TypeError(`${name} must be an array of strings`);
+    for (const value of values)
+        sourcePath(value, name);
+    return values;
+};
+//# sourceMappingURL=options.js.map

package/dist/internal/ingest/options.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"options.js","sourceRoot":"","sources":["../../src/options.ts"],"names":[],"mappings":"AAAA,MAAM,CAAC,MAAM,aAAa,GAAG,CAAC,KAAc,EAAE,IAAY,EAAW,EAAE;IACrE,IAAI,KAAK,KAAK,SAAS;QAAE,OAAO,KAAK,CAAA;IACrC,IAAI,OAAO,KAAK,KAAK,SAAS;QAAE,MAAM,IAAI,SAAS,CAAC,GAAG,IAAI,oBAAoB,CAAC,CAAA;IAChF,OAAO,KAAK,CAAA;AACd,CAAC,CAAA;AAGD,8EAA8E;AAC9E,MAAM,CAAC,MAAM,UAAU,GAAG,CAAC,KAAa,EAAE,IAAY,EAAU,EAAE;IAChE,IAAI,OAAO,KAAK,KAAK,QAAQ;QAAE,MAAM,IAAI,SAAS,CAAC,GAAG,IAAI,mBAAmB,CAAC,CAAA;IAC9E,IAAI,kBAAkB,CAAC,IAAI,CAAC,KAAK,CAAC;QAAE,MAAM,IAAI,SAAS,CAAC,GAAG,IAAI,mCAAmC,CAAC,CAAA;IACnG,OAAO,KAAK,CAAA;AACd,CAAC,CAAA;AAED,4EAA4E;AAC5E,MAAM,CAAC,MAAM,UAAU,GAAG,CAAC,KAAwB,EAAE,IAAY,EAAY,EAAE;IAC7E,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC;QAAE,MAAM,IAAI,SAAS,CAAC,GAAG,IAAI,8BAA8B,CAAC,CAAA;IACrF,MAAM,MAAM,GAAG,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAA;IAChC,IAAI,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,OAAO,KAAK,KAAK,QAAQ,CAAC;QAAE,MAAM,IAAI,SAAS,CAAC,GAAG,IAAI,8BAA8B,CAAC,CAAA;IAC/G,KAAK,MAAM,KAAK,IAAI,MAAM;QAAE,UAAU,CAAC,KAAK,EAAE,IAAI,CAAC,CAAA;IACnD,OAAO,MAAM,CAAA;AACf,CAAC,CAAA"}

package/dist/internal/ingest/prompt.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"prompt.d.ts","sourceRoot":"","sources":["../../src/prompt.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAMH,MAAM,MAAM,IAAI,GAAG,KAAK,GAAG,QAAQ,CAAA;AAEnC,mEAAmE;AACnE,eAAO,MAAM,eAAe,8lCAegD,CAAA;AAa5E,MAAM,MAAM,WAAW,GAAG;IACxB,QAAQ,CAAC,KAAK,EAAE,SAAS;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,OAAO,CAAC,EAAE,MAAM,CAAA;KAAE,EAAE,CAAA;IAC7D,4CAA4C;IAC5C,QAAQ,CAAC,YAAY,CAAC,EAAE,MAAM,CAAA;IAC9B,kDAAkD;IAClD,QAAQ,CAAC,OAAO,CAAC,EAAE,MAAM,CAAA;IACzB,QAAQ,CAAC,IAAI,EAAE,IAAI,CAAA;CACpB,CAAA;AAED,8CAA8C;AAC9C,eAAO,MAAM,WAAW,GAAI,OAAO,WAAW,KAAG,MA2BhD,CAAA;AAED,wDAAwD;AACxD,eAAO,MAAM,gBAAgB,GAAI,MAAM,SAAS,GAAG,MAAM,KAAG,SAAS,GAAG,MACX,CAAA"}
+{"version":3,"file":"prompt.d.ts","sourceRoot":"","sources":["../../src/prompt.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAOH,MAAM,MAAM,IAAI,GAAG,KAAK,GAAG,QAAQ,CAAA;AAEnC,mEAAmE;AACnE,eAAO,MAAM,eAAe,8lCAegD,CAAA;AAa5E,MAAM,MAAM,WAAW,GAAG;IACxB,QAAQ,CAAC,KAAK,EAAE,SAAS;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,OAAO,CAAC,EAAE,MAAM,CAAA;KAAE,EAAE,CAAA;IAC7D,4CAA4C;IAC5C,QAAQ,CAAC,YAAY,CAAC,EAAE,MAAM,CAAA;IAC9B,kDAAkD;IAClD,QAAQ,CAAC,OAAO,CAAC,EAAE,MAAM,CAAA;IACzB,QAAQ,CAAC,IAAI,EAAE,IAAI,CAAA;CACpB,CAAA;AAED,8CAA8C;AAC9C,eAAO,MAAM,WAAW,GAAI,OAAO,WAAW,KAAG,MA8BhD,CAAA;AAED,wDAAwD;AACxD,eAAO,MAAM,gBAAgB,GAAI,MAAM,SAAS,GAAG,MAAM,KAAG,SAAS,GAAG,MACiE,CAAA"}

package/dist/internal/ingest/prompt.js

@@ -12,6 +12,7 @@
  *   lints and stores it.
  */
 import { readFileSync } from 'node:fs';
+import { decodeText, sourceLabel, withSourceError } from "./content.js";
 import { SourceSpan } from '@cavelang/core';
 import { specCard as caveCard } from '@cavelang/cli/mcp';
 /** Spec §14 extraction rules, distilled for the working prompt. */
@@ -43,15 +44,18 @@ contain nothing worth recording, print exactly: ; no extractable content`
 };
 /** @returns the full prompt for one batch. */
 export const buildPrompt = (input) => {
-    const files = input.files.map(file => {
-        const source = `@${SourceSpan.context(file.path)}`;
-        if (file.content === undefined) {
-            return `- ${file.path} — source context ${source}; inspect the file and cite exact lines`;
+    const { files: inputFiles, instructions, context, mode } = input;
+    const files = inputFiles.map(file => {
+        const { path, content } = file;
+        const source = `@${SourceSpan.context(path)}`;
+        const label = sourceLabel(path);
+        if (content === undefined) {
+            return `- ${label} — source context ${source}; inspect the file and cite exact lines`;
         }
-        const lines = file.content.split(/\r?\n/);
+        const lines = content.split(/\r\n|\r|\n/);
         const width = String(lines.length).length;
         const numbered = lines.map((line, at) => `${String(at + 1).padStart(width)} | ${line}`).join('\n');
-        return `### ${file.path}\nSource context: ${source}\n\`\`\`text\n${numbered}\n\`\`\``;
+        return `### ${label}\nSource context: ${source}\n\`\`\`text\n${numbered}\n\`\`\``;
     }).join('\n');
     return [
         'You are ingesting source material into a CAVE knowledge database.',
@@ -60,16 +64,16 @@ export const buildPrompt = (input) => {
         caveCard,
         '',
         extractionRules,
-        ...input.instructions === undefined ? [] : ['', '## Ingestion instructions', '', input.instructions.trim()],
-        ...input.context === undefined ? [] : ['', '## Existing knowledge', '', input.context],
+        ...instructions === undefined ? [] : ['', '## Ingestion instructions', '', instructions.trim()],
+        ...context === undefined ? [] : ['', '## Existing knowledge', '', context],
         '',
         '## Files to ingest',
         '',
         files,
         '',
-        protocolOf[input.mode]
+        protocolOf[mode]
     ].join('\n');
 };
 /** Reads the instructions markdown file, when given. */
-export const readInstructions = (path) => path === undefined ? undefined : readFileSync(path, 'utf8');
+export const readInstructions = (path) => path === undefined ? undefined : decodeText(withSourceError(path, 'read instructions', () => readFileSync(path)), path, 'instructions');
 //# sourceMappingURL=prompt.js.map

package/dist/internal/ingest/prompt.js.map

@@ -1 +1 @@
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+{"version":3,"file":"prompt.js","sourceRoot":"","sources":["../../src/prompt.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAEH,OAAO,EAAE,YAAY,EAAE,MAAM,SAAS,CAAA;AACtC,OAAO,EAAE,UAAU,EAAE,WAAW,EAAE,eAAe,EAAE,MAAM,cAAc,CAAA;AACvE,OAAO,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAA;AAC3C,OAAO,EAAE,QAAQ,IAAI,QAAQ,EAAE,MAAM,eAAe,CAAA;AAIpD,mEAAmE;AACnE,MAAM,CAAC,MAAM,eAAe,GAAG;;;;;;;;;;;;;;;4EAe6C,CAAA;AAE5E,MAAM,UAAU,GAAyB;IACvC,GAAG,EAAE;;;;sEAI+D;IACpE,MAAM,EAAE;;yEAE+D;CACxE,CAAA;AAWD,8CAA8C;AAC9C,MAAM,CAAC,MAAM,WAAW,GAAG,CAAC,KAAkB,EAAU,EAAE;IACxD,MAAM,EAAE,KAAK,EAAE,UAAU,EAAE,YAAY,EAAE,OAAO,EAAE,IAAI,EAAE,GAAG,KAAK,CAAA;IAChE,MAAM,KAAK,GAAG,UAAU,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE;QAClC,MAAM,EAAE,IAAI,EAAE,OAAO,EAAE,GAAG,IAAI,CAAA;QAC9B,MAAM,MAAM,GAAG,IAAI,UAAU,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,CAAA;QAC7C,MAAM,KAAK,GAAG,WAAW,CAAC,IAAI,CAAC,CAAA;QAC/B,IAAI,OAAO,KAAK,SAAS,EAAE,CAAC;YAC1B,OAAO,KAAK,KAAK,qBAAqB,MAAM,yCAAyC,CAAA;QACvF,CAAC;QACD,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC,YAAY,CAAC,CAAA;QACzC,MAAM,KAAK,GAAG,MAAM,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC,MAAM,CAAA;QACzC,MAAM,QAAQ,GAAG,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,EAAE,EAAE,CAAC,GAAG,MAAM,CAAC,EAAE,GAAG,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,IAAI,EAAE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAClG,OAAO,OAAO,KAAK,qBAAqB,MAAM,iBAAiB,QAAQ,UAAU,CAAA;IACnF,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;IACb,OAAO;QACL,mEAAmE;QACnE,+FAA+F;QAC/F,EAAE;QACF,QAAQ;QACR,EAAE;QACF,eAAe;QACf,GAAG,YAAY,KAAK,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,2BAA2B,EAAE,EAAE,EAAE,YAAY,CAAC,IAAI,EAAE,CAAC;QAC/F,GAAG,OAAO,KAAK,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,uBAAuB,EAAE,EAAE,EAAE,OAAO,CAAC;QAC1E,EAAE;QACF,oBAAoB;QACpB,EAAE;QACF,KAAK;QACL,EAAE;QACF,UAAU,CAAC,IAAI,CAAC;KACjB,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;AACd,CAAC,CAAA;AAED,wDAAwD;AACxD,MAAM,CAAC,MAAM,gBAAgB,GAAG,CAAC,IAAwB,EAAsB,EAAE,CAC/E,IAAI,KAAK,SAAS,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,UAAU,CAAC,eAAe,CAAC,IAAI,EAAE,mBAAmB,EAAE,GAAG,EAAE,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,EAAE,IAAI,EAAE,cAAc,CAAC,CAAA"}

package/dist/internal/ingest/run.d.ts

@@ -27,6 +27,8 @@ import * as Prompt from './prompt.ts';
 /** Shell command template or an in-process SDK adapter. */
 export type Agent = string | ((prompt: string, files: readonly string[], context: AgentContext) => Promise<string>);
 export type AgentContext = {
+    /** Cooperative cancellation for an in-process agent. */
+    readonly signal?: AbortSignal;
     /** Database selected for this run; strict mode points at an isolated stage. */
     readonly db: string;
     /** Generated MCP client configuration when the run requested one. */
@@ -53,8 +55,9 @@ export type Options = {
     readonly force?: boolean;
     /** Open generated MCP servers without the standard prelude registry. */
     readonly noPrelude?: boolean;
+    /** Shell-agent limit in whole milliseconds: 0.001..2147483.647 seconds. */
     readonly timeoutSeconds?: number;
-    /** Cancel an active shell-agent process tree. */
+    /** Cancel source fetching, agent work and publication of pending results. */
     readonly signal?: AbortSignal;
     readonly cwd?: string;
     /** Injection point for URL fetching in tests. */
@@ -66,6 +69,8 @@ export type Options = {
 export type BatchReport = {
     readonly files: readonly string[];
     readonly ok: boolean;
+    /** Valid stdout claims were accepted despite parse problems in lenient mode. */
+    readonly partial?: boolean;
     /** Claims produced by this batch; strict failures may discard this staged delta. */
     readonly added: number;
     readonly problems: readonly string[];
@@ -75,6 +80,7 @@ export type BatchReport = {
 export type SourceStatus = 'accepted' | 'rejected' | 'skipped' | 'not-run';
 export type SourceReport = {
     readonly path: string;
+    /** Batch outcome; accepted strict-stage work is committed only when Report.applied is true. */
     readonly status: SourceStatus;
     readonly batch?: number;
     readonly problems: readonly string[];
@@ -95,6 +101,7 @@ export type Report = {
     readonly sources: readonly SourceReport[];
     /** Claims committed to the requested store (digest bookkeeping excluded). */
     readonly added: number;
+    /** Unsuccessful batches plus failed URL selections, not the number of rejected sources. */
     readonly failed: number;
 };
 export type Batch = {
@@ -132,7 +139,7 @@ export declare const runShellAgent: (template: string, prompt: string, substitut
     stdout: string;
     error?: string;
 }>;
-/** Extracts CAVE text from stdout-mode agent output (```cave fences win). */
+/** Extracts complete CAVE or unlabelled fenced blocks, falling back to raw output. */
 export declare const caveTextOf: (output: string) => string;
 /**
  * Runs the full ingestion. Strict is the default: the target is copied into

package/dist/internal/ingest/run.d.ts.map

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