@braingrid/cli 0.2.58 → 0.2.59

package/CHANGELOG.md

@@ -7,6 +7,13 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [0.2.59] - 2026-03-11
+
+### Fixed
+
+- **`braingrid init` should continue after update** — init now continues the setup flow after updating instead of exiting early, and saves `project.json` after project creation
+- **Skip deprecated files during setup** — setup no longer fails when encountering deprecated files that were already removed
+
 ## [0.2.58] - 2026-03-06
 
 ### Added

package/dist/cli.js

@@ -226,7 +226,7 @@ async function axiosWithRetry(config2, options) {
 
 // src/build-config.ts
 var BUILD_ENV = true ? "production" : process.env.NODE_ENV === "test" ? "development" : "production";
-var CLI_VERSION = true ? "0.2.58" : "0.0.0-test";
+var CLI_VERSION = true ? "0.2.59" : "0.0.0-test";
 var PRODUCTION_CONFIG = {
   apiUrl: "https://app.braingrid.ai",
   workosAuthUrl: "https://auth.braingrid.ai",
@@ -2380,6 +2380,7 @@ async function handleCompletion(shellArg, opts) {
 }
 
 // src/handlers/init.handlers.ts
+import { execSync as execSync4 } from "child_process";
 import { access as access3 } from "fs/promises";
 import { confirm as confirm2, input, select as select3 } from "@inquirer/prompts";
 import chalk12 from "chalk";
@@ -3934,7 +3935,10 @@ async function _handleSetup(config2, opts) {
   );
   console.log(chalk10.bold(`\u{1F680} Setting up ${config2.name} integration...
 `));
-  const operations = await getFileList(config2.sourceDirs, config2.targetDirs);
+  const deprecatedSet = new Set((config2.deprecatedFiles ?? []).map((f) => path7.resolve(f)));
+  const operations = (await getFileList(config2.sourceDirs, config2.targetDirs)).filter(
+    (op) => !deprecatedSet.has(path7.resolve(op.targetPath))
+  );
   const injectionFileExists = await fileExists(config2.injection.targetFile);
   operations.push({
     type: "inject",
@@ -4703,10 +4707,21 @@ async function handleInit(opts) {
       if (shouldUpdate) {
         const result = await handleUpdate({});
         console.log(result.message);
-        return {
-          success: true,
-          message: chalk12.dim("\nRun `braingrid init` again after the update completes.")
-        };
+        try {
+          const args = ["init"];
+          if (opts.force) args.push("--force");
+          if (opts.project) args.push("--project", opts.project);
+          execSync4(`braingrid ${args.join(" ")}`, {
+            stdio: "inherit",
+            timeout: 12e4
+          });
+          return { success: true, message: "" };
+        } catch {
+          return {
+            success: true,
+            message: chalk12.dim("\nRun `braingrid init` again to complete setup.")
+          };
+        }
       }
       console.log();
     }
@@ -4876,7 +4891,7 @@ async function handleInit(opts) {
       console.log(chalk12.green("\u2705 Organization ID updated successfully\n"));
     }
     let gitInfo = await getGitRepositoryInfo();
-    let project2;
+    let project2 = null;
     if (opts.project) {
       try {
         project2 = await projectService.getProject(opts.project);
@@ -4937,7 +4952,8 @@ async function handleInit(opts) {
           message: chalk12.red("\u274C Repository information is incomplete")
         };
       }
-      let response;
+      let response = null;
+      let handled404 = false;
       try {
         response = await projectService.listProjects({
           repository_owner: owner,
@@ -4947,7 +4963,8 @@ async function handleInit(opts) {
         if (error && typeof error === "object" && "response" in error) {
           const axiosError = error;
           if (axiosError.response?.status === 404) {
-            return await handleNoProjectForRepository(
+            handled404 = true;
+            const noProjectResult = await handleNoProjectForRepository(
               owner,
               name,
               gitInfo,
@@ -4956,22 +4973,42 @@ async function handleInit(opts) {
               projectService,
               config2
             );
+            if (!noProjectResult.success || !noProjectResult.data) {
+              return noProjectResult;
+            }
+            project2 = noProjectResult.data;
+          } else {
+            throw error;
           }
+        } else {
+          throw error;
         }
-        throw error;
       }
-      if (response.projects.length === 0) {
-        return await handleNoProjectForRepository(
-          owner,
-          name,
-          gitInfo,
-          githubService,
-          repositoryService,
-          projectService,
-          config2
-        );
+      if (!handled404 && response) {
+        if (response.projects.length === 0) {
+          const noProjectResult = await handleNoProjectForRepository(
+            owner,
+            name,
+            gitInfo,
+            githubService,
+            repositoryService,
+            projectService,
+            config2
+          );
+          if (!noProjectResult.success || !noProjectResult.data) {
+            return noProjectResult;
+          }
+          project2 = noProjectResult.data;
+        } else {
+          project2 = response.projects[0];
+        }
       }
-      project2 = response.projects[0];
+    }
+    if (!project2) {
+      return {
+        success: false,
+        message: chalk12.red("\u274C Failed to determine project")
+      };
     }
     log("INFO", "init", "project_found", `id=${project2.short_id} name=${project2.name}`);
     const projectInfo = chalk12.bold("\n\u{1F4E6} BrainGrid Project Found\n\n") + chalk12.dim("Project:     ") + chalk12.cyan(project2.name) + "\n" + chalk12.dim("ID:          ") + chalk12.gray(project2.short_id) + "\n" + (project2.description ? `${chalk12.dim("Description: ") + chalk12.gray(project2.description)}