@bradtaylorsf/alpha-loop 1.4.2 → 1.5.0

package/dist/lib/eval-swebench.d.ts

@@ -0,0 +1,68 @@
+/** Raw SWE-bench entry as provided by HuggingFace datasets. */
+export type SwebenchEntry = {
+    instance_id: string;
+    repo: string;
+    base_commit: string;
+    problem_statement: string;
+    patch: string;
+    test_patch: string;
+    FAIL_TO_PASS: string;
+    PASS_TO_PASS: string;
+    version: string;
+    environment_setup_commit?: string;
+};
+/** Options for importing SWE-bench entries. */
+export type ImportOptions = {
+    /** Path to a downloaded JSONL file. If not provided, auto-downloads. */
+    dataset?: string;
+    /** HuggingFace dataset ID (default: princeton-nlp/SWE-bench_Lite). */
+    datasetId?: string;
+    /** Maximum number of entries to import. */
+    count?: number;
+    /** Filter by repo (e.g. 'django/django'). */
+    repo?: string;
+    /** Import specific instance IDs (comma-separated). */
+    ids?: string;
+    /** Pipeline step to target (default: 'implement'). */
+    step?: string;
+    /** Project directory. */
+    projectDir?: string;
+    /** Eval directory override. */
+    evalDir?: string;
+};
+/**
+ * Download a SWE-bench dataset from HuggingFace and save as JSONL.
+ * Requires Python with the `datasets` library installed.
+ */
+export declare function downloadDataset(datasetId: string, outputPath: string): void;
+/**
+ * Read a JSONL file and parse SWE-bench entries.
+ * Supports filtering by repo, instance IDs, and count.
+ */
+export declare function importFromJsonl(datasetPath: string, options?: Pick<ImportOptions, 'count' | 'repo' | 'ids'>): SwebenchEntry[];
+/**
+ * Convert a SWE-bench entry into a directory-based eval case.
+ *
+ * Creates:
+ *   .alpha-loop/evals/cases/e2e/swe-{sanitized-id}/
+ *   ├── issue.md           # From problem_statement
+ *   ├── checks.yaml        # FAIL_TO_PASS tests as acceptance criteria
+ *   ├── metadata.yaml      # repo, base_commit, instance_id, source: swe-bench
+ *   └── reference.patch    # The validated fix (for comparison, not shown to agent)
+ *
+ * Returns the path to the created case directory.
+ */
+export declare function convertToEvalCase(entry: SwebenchEntry, projectDir?: string, evalDirOverride?: string, step?: string): string;
+/**
+ * Update eval config.yaml with SWE-bench repo base commits.
+ */
+export declare function updateEvalConfig(evalDirPath: string, entries: SwebenchEntry[]): void;
+/**
+ * Run the full SWE-bench import pipeline.
+ * Returns the number of cases imported.
+ */
+export declare function importSwebench(options: ImportOptions): number;
+/**
+ * List available SWE-bench cases that have been imported.
+ */
+export declare function listImportedSwebenchCases(projectDir?: string, evalDirOverride?: string): string[];

package/dist/lib/eval-swebench.js

@@ -0,0 +1,274 @@
+/**
+ * SWE-bench Importer — download and convert SWE-bench entries to eval cases.
+ *
+ * SWE-bench provides real GitHub issues from real Python repos, frozen at the
+ * exact commit where the bug existed. Each entry includes a validated fix (patch)
+ * and tests that verify the fix (FAIL_TO_PASS).
+ *
+ * Supported datasets:
+ *   - princeton-nlp/SWE-bench_Lite (300 curated issues)
+ *   - princeton-nlp/SWE-bench_Verified (500 human-verified issues)
+ */
+import { existsSync, mkdirSync, readFileSync, writeFileSync, readdirSync, rmSync } from 'node:fs';
+import { join, basename } from 'node:path';
+import { parse as parseYaml, stringify as stringifyYaml } from 'yaml';
+import { exec } from './shell.js';
+import { log } from './logger.js';
+import { evalsDir } from './eval.js';
+import { loadEvalConfig } from './eval-fixtures.js';
+/**
+ * Download a SWE-bench dataset from HuggingFace and save as JSONL.
+ * Requires Python with the `datasets` library installed.
+ */
+export function downloadDataset(datasetId, outputPath) {
+    const dir = join(outputPath, '..');
+    mkdirSync(dir, { recursive: true });
+    // Validate datasetId to prevent injection (must be owner/dataset format)
+    if (!/^[\w.-]+\/[\w._-]+$/.test(datasetId)) {
+        throw new Error(`Invalid dataset ID: ${datasetId}. Expected format: owner/dataset-name`);
+    }
+    // Use a temp Python script file instead of inline -c to avoid shell escaping issues
+    const scriptPath = join(dir, '_download_dataset.py');
+    const scriptContent = [
+        'import json, sys, os',
+        'from datasets import load_dataset',
+        `ds = load_dataset(${JSON.stringify(datasetId)}, split="test")`,
+        `output_path = ${JSON.stringify(outputPath)}`,
+        'with open(output_path, "w") as f:',
+        '    for entry in ds:',
+        '        f.write(json.dumps(entry) + "\\n")',
+        'print(f"Downloaded {len(ds)} entries to {output_path}")',
+    ].join('\n');
+    writeFileSync(scriptPath, scriptContent);
+    log.info(`Downloading ${datasetId} from HuggingFace...`);
+    const result = exec(`python3 "${scriptPath}"`, { timeout: 300_000 });
+    // Clean up temp script
+    try {
+        rmSync(scriptPath);
+    }
+    catch { /* non-fatal */ }
+    if (result.exitCode !== 0) {
+        throw new Error(`Failed to download dataset. Ensure Python and 'datasets' are installed:\n` +
+            `  pip install datasets\n\n${result.stderr}`);
+    }
+    log.info(result.stdout);
+}
+/**
+ * Read a JSONL file and parse SWE-bench entries.
+ * Supports filtering by repo, instance IDs, and count.
+ */
+export function importFromJsonl(datasetPath, options) {
+    if (!existsSync(datasetPath)) {
+        throw new Error(`Dataset file not found: ${datasetPath}`);
+    }
+    const content = readFileSync(datasetPath, 'utf-8');
+    const lines = content.trim().split('\n').filter(Boolean);
+    let entries = lines.map((line) => {
+        const parsed = JSON.parse(line);
+        return parsed;
+    });
+    // Filter by specific instance IDs
+    if (options?.ids) {
+        const idSet = new Set(options.ids.split(',').map((s) => s.trim()));
+        entries = entries.filter((e) => idSet.has(e.instance_id));
+    }
+    // Filter by repo
+    if (options?.repo) {
+        entries = entries.filter((e) => e.repo === options.repo);
+    }
+    // Limit count
+    if (options?.count && options.count > 0) {
+        entries = entries.slice(0, options.count);
+    }
+    return entries;
+}
+/**
+ * Convert a SWE-bench entry into a directory-based eval case.
+ *
+ * Creates:
+ *   .alpha-loop/evals/cases/e2e/swe-{sanitized-id}/
+ *   ├── issue.md           # From problem_statement
+ *   ├── checks.yaml        # FAIL_TO_PASS tests as acceptance criteria
+ *   ├── metadata.yaml      # repo, base_commit, instance_id, source: swe-bench
+ *   └── reference.patch    # The validated fix (for comparison, not shown to agent)
+ *
+ * Returns the path to the created case directory.
+ */
+export function convertToEvalCase(entry, projectDir, evalDirOverride, step) {
+    const dir = evalsDir(projectDir, evalDirOverride);
+    const sanitizedId = entry.instance_id.replace(/[^a-zA-Z0-9_-]/g, '-').toLowerCase();
+    const caseId = `swe-${sanitizedId}`;
+    const targetStep = step ?? 'implement';
+    // e2e cases go under cases/e2e/
+    const casePath = join(dir, 'cases', 'e2e', caseId);
+    mkdirSync(casePath, { recursive: true });
+    // Parse FAIL_TO_PASS — it's a JSON string containing a list of test identifiers
+    let failToPass = [];
+    try {
+        failToPass = JSON.parse(entry.FAIL_TO_PASS);
+        if (!Array.isArray(failToPass))
+            failToPass = [String(entry.FAIL_TO_PASS)];
+    }
+    catch {
+        failToPass = entry.FAIL_TO_PASS ? [entry.FAIL_TO_PASS] : [];
+    }
+    // Parse PASS_TO_PASS
+    let passToPass = [];
+    try {
+        passToPass = JSON.parse(entry.PASS_TO_PASS);
+        if (!Array.isArray(passToPass))
+            passToPass = [];
+    }
+    catch {
+        passToPass = [];
+    }
+    // metadata.yaml
+    const metadata = stringifyYaml({
+        id: caseId,
+        description: `SWE-bench: ${entry.instance_id}`,
+        tags: ['swe-bench', entry.repo.replace('/', '-'), targetStep],
+        source: 'swe-bench',
+        swebench: {
+            instance_id: entry.instance_id,
+            repo: entry.repo,
+            base_commit: entry.base_commit,
+            version: entry.version || undefined,
+        },
+    });
+    writeFileSync(join(casePath, 'metadata.yaml'), metadata);
+    // checks.yaml — FAIL_TO_PASS tests as test_pass checks
+    const checks = [];
+    // Primary check: the tests that must go from failing to passing
+    if (failToPass.length > 0) {
+        checks.push({
+            type: 'test_pass',
+            command: buildTestCommand(entry.repo, failToPass),
+        });
+    }
+    // Keyword checks: ensure key test identifiers appear in output
+    if (failToPass.length > 0) {
+        checks.push({
+            type: 'keyword_present',
+            keywords: failToPass.slice(0, 5), // Limit to avoid overly long checks
+        });
+    }
+    const checksYaml = stringifyYaml({
+        type: 'full',
+        step: targetStep,
+        eval_method: 'checks',
+        status: 'ready',
+        repo: entry.repo,
+        fixture_ref: entry.base_commit,
+        fail_to_pass: failToPass,
+        pass_to_pass: passToPass.slice(0, 10), // Keep manageable
+        checks,
+    });
+    writeFileSync(join(casePath, 'checks.yaml'), checksYaml);
+    // issue.md — the problem statement
+    const title = extractTitle(entry.instance_id, entry.problem_statement);
+    const issueContent = `# ${title}\n\n${entry.problem_statement}\n`;
+    writeFileSync(join(casePath, 'issue.md'), issueContent);
+    // reference.patch — validated fix for comparison
+    if (entry.patch) {
+        writeFileSync(join(casePath, 'reference.patch'), entry.patch);
+    }
+    // test.patch — test changes for verification
+    if (entry.test_patch) {
+        writeFileSync(join(casePath, 'test.patch'), entry.test_patch);
+    }
+    return casePath;
+}
+/**
+ * Update eval config.yaml with SWE-bench repo base commits.
+ */
+export function updateEvalConfig(evalDirPath, entries) {
+    const config = loadEvalConfig(evalDirPath);
+    const repos = config.swebench_repos ?? {};
+    for (const entry of entries) {
+        if (!repos[entry.repo]) {
+            repos[entry.repo] = { base_commits: {} };
+        }
+        repos[entry.repo].base_commits[entry.instance_id] = entry.base_commit;
+    }
+    // Read existing config and update swebench_repos section
+    const configPath = join(evalDirPath, 'config.yaml');
+    let existing = {};
+    if (existsSync(configPath)) {
+        try {
+            existing = parseYaml(readFileSync(configPath, 'utf-8'));
+        }
+        catch { /* start fresh */ }
+    }
+    existing.swebench_repos = repos;
+    writeFileSync(configPath, stringifyYaml(existing));
+}
+/**
+ * Run the full SWE-bench import pipeline.
+ * Returns the number of cases imported.
+ */
+export function importSwebench(options) {
+    const projectDir = options.projectDir ?? process.cwd();
+    const evalDirPath = evalsDir(projectDir, options.evalDir);
+    // Determine dataset path
+    let datasetPath = options.dataset;
+    if (!datasetPath) {
+        const datasetId = options.datasetId ?? 'princeton-nlp/SWE-bench_Lite';
+        datasetPath = join(evalDirPath, 'datasets', `${datasetId.replace(/\//g, '_')}.jsonl`);
+        if (!existsSync(datasetPath)) {
+            downloadDataset(datasetId, datasetPath);
+        }
+        else {
+            log.info(`Using cached dataset: ${datasetPath}`);
+        }
+    }
+    // Parse and filter entries
+    const entries = importFromJsonl(datasetPath, {
+        count: options.count,
+        repo: options.repo,
+        ids: options.ids,
+    });
+    if (entries.length === 0) {
+        log.warn('No matching SWE-bench entries found.');
+        return 0;
+    }
+    log.info(`Importing ${entries.length} SWE-bench case(s)...`);
+    // Convert each entry to an eval case
+    const created = [];
+    for (const entry of entries) {
+        const casePath = convertToEvalCase(entry, projectDir, options.evalDir, options.step);
+        created.push(casePath);
+        log.info(`  Created: ${basename(casePath)}`);
+    }
+    // Update config.yaml with repo mappings
+    updateEvalConfig(evalDirPath, entries);
+    return created.length;
+}
+/** Extract a title from instance_id or first line of problem_statement. */
+function extractTitle(instanceId, problemStatement) {
+    // Try to extract from first line of problem statement
+    const firstLine = problemStatement.split('\n')[0].trim();
+    if (firstLine && firstLine.length > 10 && firstLine.length < 200) {
+        return firstLine;
+    }
+    // Fall back to instance_id formatted as title
+    return instanceId.replace(/__/g, ': ').replace(/-/g, ' ');
+}
+/** Build a test command for a SWE-bench repo. */
+function buildTestCommand(repo, tests) {
+    // Most SWE-bench repos are Python — use pytest
+    const testArgs = tests.slice(0, 3).join(' ');
+    return `python -m pytest ${testArgs}`;
+}
+/**
+ * List available SWE-bench cases that have been imported.
+ */
+export function listImportedSwebenchCases(projectDir, evalDirOverride) {
+    const dir = evalsDir(projectDir, evalDirOverride);
+    const e2eDir = join(dir, 'cases', 'e2e');
+    if (!existsSync(e2eDir))
+        return [];
+    return readdirSync(e2eDir, { withFileTypes: true })
+        .filter((d) => d.isDirectory() && d.name.startsWith('swe-'))
+        .map((d) => d.name);
+}
+//# sourceMappingURL=eval-swebench.js.map

package/dist/lib/eval-swebench.js.map

@@ -0,0 +1 @@
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package/dist/lib/eval.d.ts

@@ -4,7 +4,7 @@ import type { CheckDefinition } from './eval-checks.js';
 /** Status of a captured eval case. */
 export type CapturedCaseStatus = 'needs-annotation' | 'ready';
 /** The pipeline step that a step-level eval targets. */
-export type PipelineStep = 'plan' | 'implement' | 'test' | 'review' | 'verify';
+export type PipelineStep = 'plan' | 'implement' | 'test' | 'review' | 'verify' | 'learn' | 'skill' | 'test-fix';
 /** Expected outcome for an eval case. */
 export type ExpectedOutcome = {
     /** Should the pipeline succeed? */
@@ -61,6 +61,12 @@ export type EvalResult = {
     retries: number;
     duration: number;
     error?: string;
+    /** Cost in USD for this case (from agent token usage). */
+    costUsd?: number;
+    /** Input tokens consumed by this case. */
+    inputTokens?: number;
+    /** Output tokens generated by this case. */
+    outputTokens?: number;
     details: {
         successMatch: boolean;
         filesMatch: boolean;
@@ -74,6 +80,8 @@ export type EvalSuiteResult = {
     cases: EvalResult[];
     composite: number;
     totalDuration: number;
+    /** Total cost in USD across all cases (from agent token usage). */
+    totalCost: number;
     passCount: number;
     failCount: number;
 };

package/dist/lib/eval.js

@@ -97,13 +97,23 @@ export function loadEvalCaseDir(dirPath) {
         const captureStatus = checksRaw.status === 'needs-annotation' ? 'needs-annotation'
             : checksRaw.status === 'ready' ? 'ready'
                 : undefined;
+        // Resolve fixture repo — support SWE-bench metadata with nested swebench.repo
+        const swebench = metadata.swebench;
+        let fixtureRepo = String(checksRaw.repo ?? metadata.repo ?? '');
+        let fixtureRef = String(checksRaw.fixture_ref ?? metadata.fixture_ref ?? 'main');
+        if (swebench && typeof swebench === 'object') {
+            if (!fixtureRepo && swebench.repo)
+                fixtureRepo = String(swebench.repo);
+            if (fixtureRef === 'main' && swebench.base_commit)
+                fixtureRef = String(swebench.base_commit);
+        }
         return {
             id,
             description: String(metadata.description ?? (issueTitle || id)),
             type: evalType,
             step: checksRaw.step ? String(checksRaw.step) : undefined,
-            fixtureRepo: String(checksRaw.repo ?? metadata.repo ?? ''),
-            fixtureRef: String(checksRaw.fixture_ref ?? metadata.fixture_ref ?? 'main'),
+            fixtureRepo,
+            fixtureRef,
             issueTitle,
             issueBody: issueBody || inputText || '',
             expected: {
@@ -323,7 +333,7 @@ export function recordEvalResults(results, config, cost, projectDir) {
     const passCount = results.filter((r) => r.passed).length;
     const failCount = results.length - passCount;
     const totalDuration = results.reduce((sum, r) => sum + r.duration, 0);
-    return { cases: results, composite, totalDuration, passCount, failCount };
+    return { cases: results, composite, totalDuration, totalCost: cost, passCount, failCount };
 }
 /**
  * Format eval case for display.
@@ -493,15 +503,25 @@ export function annotateCapturedCase(casePath, annotation) {
         }
     }
 }
+/** Common stopwords to exclude from keyword extraction. */
+const STOPWORDS = new Set([
+    'should', 'would', 'could', 'have', 'been', 'were', 'they', 'them',
+    'their', 'this', 'that', 'with', 'from', 'into', 'also', 'then',
+    'than', 'when', 'what', 'which', 'where', 'there', 'here', 'some',
+    'will', 'does', 'done', 'each', 'make', 'made', 'like', 'just',
+    'only', 'very', 'more', 'most', 'such', 'other', 'about', 'after',
+    'before', 'being', 'between', 'both', 'same', 'because', 'need',
+    'needs', 'instead', 'still', 'already',
+]);
 /**
  * Extract meaningful keywords from annotation text for keyword_present checks.
+ * Filters common stopwords to produce higher-quality check terms.
  */
 function extractKeywords(text) {
-    // Split on common delimiters and take meaningful words (>3 chars)
     return text
-        .split(/[\s,;.!?]+/)
-        .filter((w) => w.length > 3)
-        .map((w) => w.toLowerCase())
+        .split(/[\s,;.!?()[\]{}:]+/)
+        .map((w) => w.toLowerCase().replace(/[^a-z0-9_-]/g, ''))
+        .filter((w) => w.length > 3 && !STOPWORDS.has(w))
         .slice(0, 5);
 }
 //# sourceMappingURL=eval.js.map

package/dist/lib/eval.js.map

@@ -1 +1 @@
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package/dist/lib/github.d.ts

@@ -1,8 +1,14 @@
+export type Comment = {
+    author: string;
+    body: string;
+    createdAt: string;
+};
 export type Issue = {
     number: number;
     title: string;
     body: string;
     labels: string[];
+    comments?: Comment[];
 };
 export type Milestone = {
     number: number;
@@ -64,3 +70,43 @@ export declare function mergePR(repo: string, head: string, method?: 'squash' |
  * This is a multi-step operation using gh project commands.
  */
 export declare function updateProjectStatus(repo: string, projectNum: number, owner: string, issueNum: number, status: string): void;
+/**
+ * Create a new issue. Returns the created issue number.
+ * Uses --body-file for shell safety (same pattern as commentIssue).
+ */
+export declare function createIssue(repo: string, title: string, body: string, labels: string[], milestone?: number): number;
+/**
+ * Update an existing issue's title and/or body.
+ */
+export declare function updateIssue(repo: string, issueNum: number, updates: {
+    title?: string;
+    body?: string;
+}): void;
+/**
+ * Close an issue with an optional reason.
+ */
+export declare function closeIssue(repo: string, issueNum: number, reason?: 'completed' | 'not_planned'): void;
+/**
+ * Create a milestone. Returns the milestone number.
+ */
+export declare function createMilestone(repo: string, title: string, description: string, dueOn?: string): number;
+/**
+ * Assign an issue to a milestone by milestone number.
+ */
+export declare function setIssueMilestone(repo: string, issueNum: number, milestoneNum: number): void;
+/**
+ * List all open issues (no label filter). Default limit 100.
+ */
+export declare function listOpenIssues(repo: string, limit?: number): Issue[];
+/**
+ * Fetch comments for a specific issue.
+ */
+export declare function getIssueComments(repo: string, issueNum: number): Comment[];
+/**
+ * Fetch a single issue with its full body and comments.
+ */
+export declare function getIssueWithComments(repo: string, issueNum: number): Issue | null;
+/**
+ * Add an issue to a GitHub Project v2.
+ */
+export declare function addIssueToProject(owner: string, projectNum: number, repo: string, issueNum: number): void;