@biongff/vizarr 1.1.1 → 1.2.0

package/package.json

@@ -1,44 +1,51 @@
 {
   "name": "@biongff/vizarr",
-  "version": "1.1.1",
+  "version": "1.2.0",
   "type": "module",
+  "main": "dist/biongff-vizarr.cjs.js",
+  "module": "dist/biongff-vizarr.es.js",
+  "types": "dist/index.d.ts",
+  "files": [
+    "dist"
+  ],
+  "exports": {
+    ".": {
+      "types": "./dist/index.d.ts",
+      "import": "./dist/biongff-vizarr.es.js",
+      "require": "./dist/biongff-vizarr.cjs.js"
+    }
+  },
   "dependencies": {
     "@deck.gl/core": "~9.0.0",
     "@deck.gl/geo-layers": "~9.0.0",
     "@deck.gl/layers": "~9.0.0",
-    "@emotion/react": "^11.14.0",
-    "@emotion/styled": "^11.14.1",
     "@hms-dbmi/viv": "~0.17.2",
-    "@mui/icons-material": "^7.2.0",
-    "@mui/material": "^7.2.0",
     "@vivjs/types": "~0.17.0",
     "@zarrita/storage": "0.1.3",
     "deck.gl": "~9.0.0",
     "jotai": "^1.0.0",
-    "just-debounce-it": "^3.1.1",
     "math.gl": "^4.1.0",
     "p-map": "^7.0.3",
     "quick-lru": "^7.0.0",
-    "react": "^18.2.0",
-    "react-dom": "^18.2.0",
     "react-is": "18.3.1",
     "zarrita": "0.5.0"
   },
+  "peerDependencies": {
+    "@emotion/react": "^11.14.0",
+    "@emotion/styled": "^11.14.1",
+    "@mui/icons-material": "^7.2.0",
+    "@mui/material": "^7.2.0",
+    "react": "^18.2.0",
+    "react-dom": "^18.2.0"
+  },
   "devDependencies": {
-    "@biomejs/biome": "^1.9.4",
-    "@semantic-release/changelog": "^6.0.3",
-    "@semantic-release/commit-analyzer": "^13.0.1",
-    "@semantic-release/git": "^10.0.1",
-    "@semantic-release/github": "^12.0.2",
-    "@semantic-release/npm": "^13.1.1",
-    "@semantic-release/release-notes-generator": "^14.1.0",
     "@types/node": "^24.3.0",
     "@types/react": "^18.3.10",
     "@types/react-dom": "^18.2.18",
     "@vitejs/plugin-react": "^4.3.4",
-    "semantic-release": "^25.0.2",
     "typescript": "^5.8.2",
-    "vite": "^6.2.7"
+    "vite": "^6.2.7",
+    "vite-plugin-dts": "^4.5.4"
   },
   "overrides": {
     "react-is": "^18.3.1"
@@ -47,8 +54,6 @@
     "dev": "vite",
     "build": "npm run check && vite build",
     "preview": "vite preview",
-    "lint": "biome ci",
-    "fix": "biome check --write",
     "check": "tsc"
   }
 }

package/.gitattributes

@@ -1 +0,0 @@
-*ipynb linguist-vendored

package/.github/ISSUE_TEMPLATE/bug_report.md

@@ -1,32 +0,0 @@
----
-name: Bug Report
-about: Report a problem with the software
-title: "[Bug] "
-labels: bug
-assignees: ""
----
-
-**Describe the bug**  
-A clear and concise description of what the bug is.
-
-**To Reproduce**  
-Steps to reproduce the behavior:
-
-1. Go to '...'
-2. Click on '...'
-3. See error
-
-**Expected behavior**  
-A clear and concise description of what you expected to happen.
-
-**Screenshots (if applicable)**  
-If applicable, add screenshots to help explain the problem.
-
-**Environment (please complete the following information):**
-
-- OS: [e.g., Windows, macOS, Linux]
-- Python/Node/Django/etc. version: [e.g., Python 3.9]
-- Browser (if applicable): [e.g., Chrome, Firefox]
-
-**Additional context**  
-Add any other context about the problem here.

package/.github/ISSUE_TEMPLATE/documentation_update.md

@@ -1,16 +0,0 @@
----
-name: Documentation Update
-about: Request changes or improvements to the documentation
-title: "[Docs] "
-labels: documentation
-assignees: ""
----
-
-**What needs updating?**  
-Describe what section of the documentation needs improvement.
-
-**Where should this be updated?**  
-Provide links or file paths if possible.
-
-**Additional context**  
-Add any other relevant context about the documentation request.

package/.github/ISSUE_TEMPLATE/feature_request.md

@@ -1,19 +0,0 @@
----
-name: Feature Request
-about: Suggest a new feature or improvement
-title: "[Feature] "
-labels: enhancement
-assignees: ""
----
-
-**Is your feature request related to a problem? Please describe.**  
-A clear and concise description of what the problem is.
-
-**Describe the solution you'd like**  
-A clear and concise description of what you want to happen.
-
-**Describe alternatives you've considered**  
-A clear and concise description of any alternative solutions or features you've considered.
-
-**Additional context**  
-Add any other context or screenshots about the feature request here.

package/.github/ISSUE_TEMPLATE/maintenance.md

@@ -1,19 +0,0 @@
----
-name: Maintenance Task
-about: Request or propose refactoring, dependency updates, or tooling improvements
-title: "[Maintenance] "
-labels: maintenance, refactor
-assignees: ""
----
-
-**Describe the task**  
-What needs to be maintained, refactored, or updated?
-
-**Reason for change**  
-Why is this maintenance needed (e.g., outdated dependency, code clarity, build speed)?
-
-**Proposed approach**  
-How might this be done?
-
-**Additional context**  
-Any links, dependencies, or related issues.

package/.github/ISSUE_TEMPLATE/optimisation_request.md

@@ -1,23 +0,0 @@
----
-name: Optimisation Request
-about: Suggest a performance or efficiency improvement
-title: "[Optimisation] "
-labels: optimisation, enhancement
-assignees: ""
----
-
-**Is your optimisation request related to a specific problem?**  
-A clear and concise description of the inefficiency or area for improvement.
-
-**Describe the proposed solution**  
-A clear and concise description of how the optimisation could be achieved.  
-(For example: refactoring code, reducing memory usage, improving response time, etc.)
-
-**Current performance**  
-(Optional) If available, provide benchmarks, logs, or profiling data showing current performance.
-
-**Expected performance improvement**  
-(Optional) If possible, describe the expected impact of the optimisation.
-
-**Additional context**  
-Add any other context or references (e.g., related issues, profiling tools used).

package/.github/ISSUE_TEMPLATE/support_request.md

@@ -1,25 +0,0 @@
----
-name: Support Request
-about: Ask for help with using or configuring the software
-title: "[Support] "
-labels: question, support
-assignees: ""
----
-
-**What are you trying to do?**  
-Describe your goal clearly.
-
-**What have you tried so far?**  
-List steps or commands you've already attempted.
-
-**What issue are you encountering?**  
-Include error messages, logs, or unexpected behaviour.
-
-**Environment:**
-
-- OS: [e.g., Windows, macOS, Linux]
-- Software version: [e.g., 1.2.3]
-- Runtime version: [e.g., Python 3.11]
-
-**Additional context:**  
-Add any relevant details, such as configuration files or links to documentation you’ve followed.

package/.github/PULL_REQUEST_TEMPLATE.md

@@ -1,21 +0,0 @@
-# Description
-
-Give a brief summary of changes...
-
-Fixes # (issue)  
-Related to # (if applicable)
-
-## Type of change
-
-- [ ] 🐛 Bug fix (non-breaking change that resolves an issue)
-- [ ] ✨ New feature (non-breaking change that adds functionality)
-- [ ] ⚡ Optimisation (non-breaking improvement to performance or efficiency)
-- [ ] 🧩 Documentation (adds or improves documentation)
-- [ ] 🧱 Maintenance (refactor, dependency update, CI/CD, etc.)
-- [ ] 🔥 Breaking change (fix or feature that causes existing functionality to change)
-
-## Checklist
-
-- [ ] All tests pass (eg. `npm test`)
-- [ ] Pre-commit hooks run successfully (eg. `pre-commit run --all-files`)
-- [ ] Documentation updated (if required)

package/.github/dependabot.yml

@@ -1,13 +0,0 @@
-version: 2
-updates:
-  # Maintain dependencies for GitHub Actions
-  - package-ecosystem: "github-actions"
-    directory: "/"
-    schedule:
-      interval: "monthly"
-
-  # Maintain dependencies for npm
-  - package-ecosystem: "npm"
-    directory: "/"
-    schedule:
-      interval: "monthly"

package/.github/workflows/deploy.yml

@@ -1,56 +0,0 @@
-name: Build and Deploy
-
-on:
-  push:
-    branches:
-      - main
-
-permissions:
-  contents: write
-  pages: write
-  id-token: write
-
-concurrency:
-  group: "pages"
-  cancel-in-progress: true
-
-jobs:
-  build:
-    runs-on: ubuntu-latest
-
-    steps:
-      - name: Checkout repository
-        uses: actions/checkout@v4
-
-      - name: Setup pnpm
-        uses: pnpm/action-setup@v4
-        with:
-          run_install: true
-
-      - name: Setup Node.js
-        uses: actions/setup-node@v4
-        with:
-          node-version: 22
-          cache: "pnpm"
-
-      - name: Build project
-        run: |
-          pnpm build
-          touch dist/.nojekyll
-
-      - name: Upload build output
-        uses: actions/upload-pages-artifact@v3
-        with:
-          path: dist
-
-  deploy:
-    runs-on: ubuntu-latest
-    needs: build
-    environment:
-      name: github-pages
-      url: ${{ steps.deployment.outputs.page_url }}
-
-    steps:
-      - name: Deploy to GitHub Pages
-        id: deployment
-        uses: actions/deploy-pages@v4

package/.github/workflows/npm-publish-dev.yml

@@ -1,49 +0,0 @@
-name: publish-dev
-# Publishes a pre-release (dev) version of the package to npmjs.org
-# whenever changes are pushed to the "dev" branch.
-
-on:
-  push:
-    branches: [dev]
-
-permissions:
-  contents: read
-
-jobs:
-  build:
-    runs-on: ubuntu-latest
-
-    steps:
-      - name: Checkout repository
-        uses: actions/checkout@v4
-
-      - name: Setup Node.js
-        uses: actions/setup-node@v4
-        with:
-          node-version: 22
-
-      - name: Install pnpm
-        run: npm install -g pnpm@9
-
-      - name: Update prerelease version
-        id: pre-release-version
-        uses: adobe/update-prerelease-npm-version@v1.0.0
-        with:
-          pre-release-tag: "dev"
-
-      - name: Install dependencies
-        run: pnpm install
-
-      - name: Build package
-        run: pnpm run build
-
-      - name: Configure npm authentication
-        run: |
-          echo "//registry.npmjs.org/:_authToken=${NPM_TOKEN}" > ~/.npmrc
-        env:
-          NPM_TOKEN: ${{ secrets.NPM_TOKEN }}
-
-      - name: Publish to npm
-        env:
-          NODE_AUTH_TOKEN: ${{ secrets.NPM_TOKEN }}
-        run: pnpm publish --tag dev --access public --no-git-checks

package/.github/workflows/npm-publish.yml

@@ -1,42 +0,0 @@
-name: publish
-# Publishes the package to npmjs.org whenever a release is published.
-
-on:
-  release:
-    types: [published]
-
-permissions:
-  contents: read
-
-jobs:
-  publish:
-    runs-on: ubuntu-latest
-
-    steps:
-      - name: Checkout repository
-        uses: actions/checkout@v4
-
-      - name: Setup Node.js
-        uses: actions/setup-node@v4
-        with:
-          node-version: 22
-
-      - name: Install pnpm
-        run: npm install -g pnpm@9
-
-      - name: Install dependencies
-        run: pnpm install
-
-      - name: Build package
-        run: pnpm run build
-
-      - name: Configure npm authentication
-        run: |
-          echo "//registry.npmjs.org/:_authToken=${NPM_TOKEN}" > ~/.npmrc
-        env:
-          NPM_TOKEN: ${{ secrets.NPM_TOKEN }}
-
-      - name: Publish to npm
-        env:
-          NODE_AUTH_TOKEN: ${{ secrets.NPM_TOKEN }}
-        run: pnpm publish --access public --no-git-checks

package/.github/workflows/release.yml

@@ -1,37 +0,0 @@
-name: Release
-
-on:
-  push:
-    branches:
-      - main
-
-permissions:
-  contents: write
-  id-token: write
-
-jobs:
-  release:
-    runs-on: ubuntu-latest
-
-    steps:
-      - name: Checkout repository
-        uses: actions/checkout@v4
-        with:
-          fetch-depth: 0
-          token: ${{ secrets.GH_PAT }}
-
-      - name: Setup Node.js
-        uses: actions/setup-node@v4
-        with:
-          node-version: 22
-
-      - name: Install pnpm
-        run: npm install -g pnpm@9
-
-      - name: Install dependencies
-        run: pnpm install
-
-      - name: Run Semantic Release
-        env:
-          GITHUB_TOKEN: ${{ secrets.GH_PAT }}
-        run: pnpm exec semantic-release

package/.github/workflows/test.yml

@@ -1,21 +0,0 @@
-name: Node CI
-
-on:
-  push:
-  pull_request:
-    branches:
-      - main
-
-jobs:
-
-  build:
-
-    runs-on: ubuntu-latest
-
-    steps:
-      - uses: actions/checkout@v5
-      - uses: pnpm/action-setup@v4
-        with:
-          run_install: true
-      - run: pnpm check
-      - run: pnpm lint

package/.releaserc.json

@@ -1,29 +0,0 @@
-{
-  "branches": ["main"],
-  "repositoryUrl": "https://github.com/BioNGFF/vizarr.git",
-  "plugins": [
-    "@semantic-release/commit-analyzer",
-    "@semantic-release/release-notes-generator",
-    [
-      "@semantic-release/changelog",
-      {
-        "changelogFile": "CHANGELOG.md",
-        "changelogTitle": "# Changelog"
-      }
-    ],
-    [
-      "@semantic-release/npm",
-      {
-        "npmPublish": false
-      }
-    ],
-    [
-      "@semantic-release/git",
-      {
-        "assets": ["package.json", "package-lock.json", "CHANGELOG.md"],
-        "message": "chore(release): ${nextRelease.version} [skip ci]\n\n${nextRelease.notes}"
-      }
-    ],
-    ["@semantic-release/github", { "releaseNameTemplate": "<%= nextRelease.version %>" }]
-  ]
-}

package/CHANGELOG.md

@@ -1,70 +0,0 @@
-# Changelog
-
-## [1.1.1](https://github.com/BioNGFF/vizarr/compare/v1.1.0...v1.1.1) (2025-11-14)
-
-
-### Bug Fixes
-
-* zipfilestore import ([58ead65](https://github.com/BioNGFF/vizarr/commit/58ead65c09aaabcfa2d944f9cb7e575c2e39365d))
-
-# [1.1.0](https://github.com/BioNGFF/vizarr/compare/v1.0.1...v1.1.0) (2025-11-14)
-
-
-### Features
-
-* try zarrita ZipFileStore ([ae5d6a7](https://github.com/BioNGFF/vizarr/commit/ae5d6a72875cc5df5839d32ca4d78ce6047ccf36))
-
-## [1.0.1](https://github.com/BioNGFF/vizarr/compare/v1.0.0...v1.0.1) (2025-11-12)
-
-
-### Bug Fixes
-
-* npm publish workflow ([283baee](https://github.com/BioNGFF/vizarr/commit/283baee9c93391f3d86fd39ddfce706d868be2e9))
-* npm publish workflow ([85873a6](https://github.com/BioNGFF/vizarr/commit/85873a6282eb5addcd4c6ac79db3b735cebe1b6e))
-* npm publish workflow ([cc0e915](https://github.com/BioNGFF/vizarr/commit/cc0e91541fe921b67a11fb35720fcbcf509d28df))
-* npm publish workflow ([baefeae](https://github.com/BioNGFF/vizarr/commit/baefeaea38c9fb2b8eacecffcf7ac2c54eb37a4d))
-* update main npm-publish workflow ([2a4d56e](https://github.com/BioNGFF/vizarr/commit/2a4d56ec747b5a5b1bf677c583eb00571d391527))
-
-# 1.0.0 (2025-11-12)
-
-
-### Bug Fixes
-
-* add semantic-release workflow ([b6044bf](https://github.com/BioNGFF/vizarr/commit/b6044bf34ae1ba7436e39e5360cea3b22d075867))
-* **channel-controller:** update contrast-limits range ([#148](https://github.com/BioNGFF/vizarr/issues/148)) ([4f576cc](https://github.com/BioNGFF/vizarr/commit/4f576ccc942b1016bb51a2bd454473b9a6aa5257))
-* convert to pnpm ([3d3c904](https://github.com/BioNGFF/vizarr/commit/3d3c9048aa3dd52749fd2f9169ff7bfec3e2ae7b))
-* convert to pnpm ([009fe1d](https://github.com/BioNGFF/vizarr/commit/009fe1d5af4135b2491d6350a392b6d443f674d8))
-* convert to pnpm ([f15ec2b](https://github.com/BioNGFF/vizarr/commit/f15ec2be66d4725ed0ab41b83dc27ea992715a4c))
-* convert to pnpm ([0ad3523](https://github.com/BioNGFF/vizarr/commit/0ad352304c4a05d9192ec5b13d2d4bc4d18fde15))
-* convert to pnpm ([44a2d30](https://github.com/BioNGFF/vizarr/commit/44a2d30c8bff873eddfbb7aed639f22bc28b7f14))
-* Float64 data type support ([#257](https://github.com/BioNGFF/vizarr/issues/257)) ([d1d36ec](https://github.com/BioNGFF/vizarr/commit/d1d36ece36b6e161f6be6de42d7c8388e266bc9c))
-* format .releaserc.json ([64d0620](https://github.com/BioNGFF/vizarr/commit/64d06203762e5c05af1dc35eb91272cc8ff360e4))
-* limit number of initial channels to max allowed ([#154](https://github.com/BioNGFF/vizarr/issues/154)) ([2ac2ccc](https://github.com/BioNGFF/vizarr/commit/2ac2ccc7c1853ff046a88b24d82c01397966c803))
-* opacityslider onchange error ([455c545](https://github.com/BioNGFF/vizarr/commit/455c5450a7fb67aaba32d95e6e13a1d588f2b7a9))
-* patch `@vivjs/loaders` to exclude `zarr` and `lzw-tiff-decoder` from final bundle ([#256](https://github.com/BioNGFF/vizarr/issues/256)) ([9a35a92](https://github.com/BioNGFF/vizarr/commit/9a35a9278f14a9c568901c9abc6e9ccf77520d22))
-* reference store initialization fromJson ([23eb8fc](https://github.com/BioNGFF/vizarr/commit/23eb8fc57fa726b2bec06b2a9938d408d11be6b2))
-* restore LRUCacheStore ([#116](https://github.com/BioNGFF/vizarr/issues/116)) ([95b37b3](https://github.com/BioNGFF/vizarr/commit/95b37b3757f1cf1e08c3c2d83812a30271e2f123))
-* Use nullish coalescing over || op for channel_axis ([#115](https://github.com/BioNGFF/vizarr/issues/115)) ([5aaec6d](https://github.com/BioNGFF/vizarr/commit/5aaec6d1e4c6a10f0b0923ce6b8653544252666f))
-
-
-### Features
-
-* add jpeg2k codec ([#129](https://github.com/BioNGFF/vizarr/issues/129)) ([c8c3ff7](https://github.com/BioNGFF/vizarr/commit/c8c3ff705156ff78c3d42ca166b49e21d48d7447))
-* Add menuOpen option ([5c6d5b6](https://github.com/BioNGFF/vizarr/commit/5c6d5b67cb73fb10a8d25e169f7bde9c3c029e11))
-* add npm deploy ([0d31a4d](https://github.com/BioNGFF/vizarr/commit/0d31a4de5bd649adab0da83eb23d31411b545b4a))
-* add semnatic-release setup ([3db098d](https://github.com/BioNGFF/vizarr/commit/3db098d39e1378df04f8039f3c5c366093f7132e))
-* bump Viv to latest ([#159](https://github.com/BioNGFF/vizarr/issues/159)) ([593ac2c](https://github.com/BioNGFF/vizarr/commit/593ac2cec34357c80861cb2b35030f15e465dd5a))
-* Bump viv to v0.16 ([#178](https://github.com/BioNGFF/vizarr/issues/178)) ([0d7abd8](https://github.com/BioNGFF/vizarr/commit/0d7abd89cbea0a2c762f41d596d6a3a2cdd5ac32))
-* **experimental:** Add Jupyter Widget ([#176](https://github.com/BioNGFF/vizarr/issues/176)) ([a88c413](https://github.com/BioNGFF/vizarr/commit/a88c4134dc3782003566c7ed51c9ff968b89f240))
-* Handle no channel axis ([#173](https://github.com/BioNGFF/vizarr/issues/173)) ([0c16bb4](https://github.com/BioNGFF/vizarr/commit/0c16bb4f23f6cb5e550257520a8bcd55aaeaf147))
-* **ngff:** Support displaying "labels" for "multiscales" nodes ([#242](https://github.com/BioNGFF/vizarr/issues/242)) ([eb2b77f](https://github.com/BioNGFF/vizarr/commit/eb2b77fed92a08c78c5770144bc7ccf19e9c7658))
-* open vizarrr with default view (in dev) ([#133](https://github.com/BioNGFF/vizarr/issues/133)) ([fdd444e](https://github.com/BioNGFF/vizarr/commit/fdd444e2a55b506e80d3c92c43389f4b089d0a9d))
-* **python:** Migrate vizarr to zarrita bindings ([#185](https://github.com/BioNGFF/vizarr/issues/185)) ([9b77d4b](https://github.com/BioNGFF/vizarr/commit/9b77d4b6c00f0c2ca5c179452c861556066df18b))
-* **python:** Use anywidget `default` export ([#250](https://github.com/BioNGFF/vizarr/issues/250)) ([bc0c98b](https://github.com/BioNGFF/vizarr/commit/bc0c98b79506ae41fcb8147de719c218e8520ad4))
-* **python:** Use async API ([#179](https://github.com/BioNGFF/vizarr/issues/179)) ([ca1b1c5](https://github.com/BioNGFF/vizarr/commit/ca1b1c5693f3cdc355a1e2f2f6b7bb57ba62d4ed))
-* Remove mitt dependency ([#183](https://github.com/BioNGFF/vizarr/issues/183)) ([c18e5f6](https://github.com/BioNGFF/vizarr/commit/c18e5f6a7ac12116e4fa8fd8102b471f648c3902))
-* replace zarr.js with zarrita.js ([#172](https://github.com/BioNGFF/vizarr/issues/172)) ([5fd49df](https://github.com/BioNGFF/vizarr/commit/5fd49df0e79b4031256df15687e54703ae41f515))
-* Update Vite build ([#175](https://github.com/BioNGFF/vizarr/issues/175)) ([c5a1091](https://github.com/BioNGFF/vizarr/commit/c5a10910b239f3cac61e331ad3b2752e61d42f12))
-* **viewer:** Add destroy API ([#182](https://github.com/BioNGFF/vizarr/issues/182)) ([693b7bb](https://github.com/BioNGFF/vizarr/commit/693b7bbe5965f01ef0f5d041ae025b3b95c4a104))
-* **viewer:** allow screenshots of deck.gl canvas ([#150](https://github.com/BioNGFF/vizarr/issues/150)) ([833954c](https://github.com/BioNGFF/vizarr/commit/833954ccf04fff1ba9b1705f6dd90ffd5a713c92))
-* **viewer:** dynamic contrast limits ([#137](https://github.com/BioNGFF/vizarr/issues/137)) ([325ee46](https://github.com/BioNGFF/vizarr/commit/325ee46956701e8e74875b6eee247b9aa2217c4b))

package/CITATION.cff

@@ -1,56 +0,0 @@
-cff-version: 1.2.0
-message: "If you use this software, please cite it using these metadata."
-authors:
-  - given-names: "Trevor"
-    family-names: "Manz"
-    affiliation: "Harvard Medical School"
-  - given-names: "Will"
-    family-names: "Moore"
-    affiliation: "Open Microscopy Environment"
-title: "Vizarr"
-url: "https://github.com/hms-dbmi/vizarr"
-preferred-citation:
-  type: article
-  title: "Viv: multiscale visualization of high-resolution multiplexed bioimaging data on the web"
-  authors:
-    - given-names: "Trevor"
-      family-names: "Manz"
-      orcid: "https://orcid.org/0000-0001-7694-5164"
-      affiliation: "Harvard Medical School"
-    - given-names: "Ilan"
-      family-names: "Gold"
-      orcid: "https://orcid.org/0000-0002-5823-1026"
-      affiliation: "Harvard Medical School"
-    - given-names: "Nathan Heath"
-      family-names: "Patterson"
-      affiliation: "Vanderbilt University"
-      orcid: "https://orcid.org/0000-0002-0064-1583"
-    - given-names: "Chuck"
-      family-names: "McCallum"
-      affiliation: "Harvard Medical School"
-      orcid: "https://orcid.org/0000-0003-4039-9768"
-    - given-names: "Mark S."
-      family-names: "Keller"
-      affiliation: "Harvard Medical School"
-      orcid: "https://orcid.org/0000-0003-3003-874X"
-    - given-names: "Bruce W."
-      family-names: "Herr"
-      name-suffix: "II"
-      affiliation: "Indiana University"
-      orcid: "https://orcid.org/0000-0002-6703-7647"
-    - given-names: "Kay"
-      family-names: "Börner"
-      affiliation: "Indiana University"
-      orcid: "https://orcid.org/0000-0002-3321-6137"
-    - given-names: "Jeffrey M."
-      family-names: "Spraggins"
-      affiliation: "Vanderbilt University"
-      orcid: "https://orcid.org/0000-0001-9198-5498"
-    - given-names: "Nils"
-      family-names: "Gehlenborg"
-      affiliation: "Harvard Medical School"
-      orcid: "https://orcid.org/0000-0003-0327-8297"
-  doi: "10.1038/s41592-022-01482-7"
-  journal: "Nature Methods"
-  month: 5
-  year: 2022