@bgicli/bgicli 2.3.6 → 2.3.7

package/dist/bgi.js

@@ -13855,7 +13855,7 @@ var TOOL_DEFINITIONS = [
           },
           timeout_ms: {
             type: "number",
-            description: "Timeout in milliseconds (default 300000 / 5 min, max 1800000 / 30 min for long jobs like STAR alignment)"
+            description: "Timeout in milliseconds (default 300000 / 5 min). For downloads (wget/curl/aria2c) or long computations (STAR, HISAT2, etc.) ALWAYS use at least 3600000 (60 min). Never set a short timeout for downloads \u2014 slow networks are normal, be patient."
           }
         },
         required: ["command"]
@@ -13959,13 +13959,14 @@ var TOOL_DEFINITIONS = [
 async function executeTool(name, args, onStream) {
   try {
     switch (name) {
-      case "bash":
-        return await toolBash(
-          args["command"],
-          args["workdir"],
-          args["timeout_ms"] ?? 3e5,
-          onStream
-        );
+      case "bash": {
+        const cmd = args["command"];
+        let timeoutMs = args["timeout_ms"] ?? 3e5;
+        if (/\b(wget|curl|aria2c|axel|rsync)\b/.test(cmd) && timeoutMs < 36e5) {
+          timeoutMs = 36e5;
+        }
+        return await toolBash(cmd, args["workdir"], timeoutMs, onStream);
+      }
       case "read_file":
         return toolReadFile(
           args["path"],
@@ -15961,7 +15962,7 @@ function clearCheckpoints(sessionId) {
 
 // src/index.ts
 var import_fs7 = require("fs");
-var VERSION2 = "2.3.6";
+var VERSION2 = "2.3.7";
 var SKILLHUB_HUBS = {
   bgi: { label: "BGI\u5185\u7F51", apiBase: "https://clawhub.ai", backend: "clawhub" },
   clawhub: { label: "clawhub.ai", apiBase: "https://clawhub.ai", backend: "clawhub" },

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@bgicli/bgicli",
-  "version": "2.3.6",
+  "version": "2.3.7",
   "description": "BGI CLI — Bioinformatics AI terminal for Chinese researchers (百炼/DeepSeek/Kimi/Qwen)",
   "bin": {
     "bgi": "dist/bgi.js"