@baton-dx/cli 0.3.0 → 0.3.2

package/dist/{create-BG_VVOTI.mjs → create-BkpEXaht.mjs}

@@ -1,7 +1,7 @@
 #!/usr/bin/env node
 import { r as __toESM } from "./chunk-BbwQpWto.mjs";
 import { a as Ne, h as defineCommand, i as Le, l as We, p as Ct, t as findSourceRoot, u as Ze } from "./context-detection-DqOTnD6_.mjs";
-import { X as KEBAB_CASE_REGEX, h as require_lib } from "./src-BgiJfm14.mjs";
+import { _ as require_lib, tt as KEBAB_CASE_REGEX } from "./src-BCGnnv5D.mjs";
 import "./agent-detection-DTiVeO5W.mjs";
 import "./esm-BagM-kVd.mjs";
 import { mkdir, readFile, readdir, writeFile } from "node:fs/promises";
@@ -79,4 +79,4 @@ async function copyProfileTemplate(sourceDir, targetDir, variables) {
 
 //#endregion
 export { createCommand };
-//# sourceMappingURL=create-BG_VVOTI.mjs.map
+//# sourceMappingURL=create-BkpEXaht.mjs.map

package/dist/{create-BG_VVOTI.mjs.map → create-BkpEXaht.mjs.map}

@@ -1 +1 @@
-{"version":3,"file":"create-BG_VVOTI.mjs","names":["p.text","p.isCancel","Handlebars"],"sources":["../src/commands/profile/create.ts"],"sourcesContent":["import { mkdir, readFile, readdir, writeFile } from \"node:fs/promises\";\nimport { dirname, join } from \"node:path\";\nimport { fileURLToPath } from \"node:url\";\nimport { KEBAB_CASE_REGEX } from \"@baton-dx/core\";\nimport * as p from \"@clack/prompts\";\nimport { defineCommand } from \"citty\";\nimport Handlebars from \"handlebars\";\nimport { findSourceRoot } from \"../../utils/context-detection.js\";\n\nconst __dirname = dirname(fileURLToPath(import.meta.url));\n\nexport const createCommand = defineCommand({\n  meta: {\n    name: \"create\",\n    description: \"Create a new profile in your source repository\",\n  },\n  args: {\n    name: {\n      type: \"positional\",\n      description: \"Profile name (kebab-case)\",\n      required: false,\n    },\n  },\n  async run({ args }) {\n    p.intro(\"Create Profile\");\n\n    // Check for baton.source.yaml in current or parent directories\n    const sourceRoot = await findSourceRoot();\n    if (!sourceRoot) {\n      p.cancel(\"This command must be run inside a source directory (baton.source.yaml not found)\");\n      process.exit(1);\n    }\n\n    // Get profile name — from argument or wizard prompt\n    let name = args.name as string | undefined;\n\n    if (!name) {\n      const nameInput = await p.text({\n        message: \"Profile name (kebab-case)\",\n        placeholder: \"e.g., backend, frontend, my-profile\",\n        validate(value) {\n          if (!value || value.trim().length === 0) {\n            return \"Profile name is required\";\n          }\n          if (!KEBAB_CASE_REGEX.test(value.trim())) {\n            return \"Profile name must be in kebab-case (e.g., my-profile, backend, frontend)\";\n          }\n        },\n      });\n\n      if (p.isCancel(nameInput)) {\n        p.cancel(\"Cancelled.\");\n        process.exit(0);\n      }\n\n      name = (nameInput as string).trim();\n    }\n\n    // Validate name format (kebab-case)\n    if (!KEBAB_CASE_REGEX.test(name)) {\n      p.cancel(\"Profile name must be in kebab-case (e.g., my-profile, backend, frontend)\");\n      process.exit(1);\n    }\n\n    // Check if profile already exists in profiles/ directory\n    const targetDir = join(sourceRoot, \"profiles\", name);\n    try {\n      await readdir(targetDir);\n      p.cancel(`Profile '${name}' already exists in profiles/${name}/`);\n      process.exit(1);\n    } catch {\n      // Directory doesn't exist - good to proceed\n    }\n\n    // Create profile directory\n    await mkdir(targetDir, { recursive: true });\n\n    // Copy minimal template files\n    const templateDir = join(__dirname, \"templates\", \"profile\", \"minimal\");\n    await copyProfileTemplate(templateDir, targetDir, { name });\n\n    p.outro(`Profile '${name}' created in profiles/${name}/`);\n  },\n});\n\n/**\n * Recursively copy profile template with variable substitution\n */\nasync function copyProfileTemplate(\n  sourceDir: string,\n  targetDir: string,\n  variables: { name: string },\n): Promise<void> {\n  const entries = await readdir(sourceDir, { withFileTypes: true });\n\n  for (const entry of entries) {\n    const sourcePath = join(sourceDir, entry.name);\n    const targetPath = join(targetDir, entry.name);\n\n    if (entry.isDirectory()) {\n      await mkdir(targetPath, { recursive: true });\n      await copyProfileTemplate(sourcePath, targetPath, variables);\n    } else {\n      // Read file content\n      const content = await readFile(sourcePath, \"utf-8\");\n\n      // Apply Handlebars substitution for text files\n      const processed = Handlebars.compile(content, { noEscape: true })(variables);\n\n      // Write processed content\n      await writeFile(targetPath, processed, \"utf-8\");\n    }\n  }\n}\n"],"mappings":";;;;;;;;;;;;AASA,MAAM,YAAY,QAAQ,cAAc,OAAO,KAAK,IAAI,CAAC;AAEzD,MAAa,gBAAgB,cAAc;CACzC,MAAM;EACJ,MAAM;EACN,aAAa;EACd;CACD,MAAM,EACJ,MAAM;EACJ,MAAM;EACN,aAAa;EACb,UAAU;EACX,EACF;CACD,MAAM,IAAI,EAAE,QAAQ;AAClB,KAAQ,iBAAiB;EAGzB,MAAM,aAAa,MAAM,gBAAgB;AACzC,MAAI,CAAC,YAAY;AACf,MAAS,mFAAmF;AAC5F,WAAQ,KAAK,EAAE;;EAIjB,IAAI,OAAO,KAAK;AAEhB,MAAI,CAAC,MAAM;GACT,MAAM,YAAY,MAAMA,GAAO;IAC7B,SAAS;IACT,aAAa;IACb,SAAS,OAAO;AACd,SAAI,CAAC,SAAS,MAAM,MAAM,CAAC,WAAW,EACpC,QAAO;AAET,SAAI,CAAC,iBAAiB,KAAK,MAAM,MAAM,CAAC,CACtC,QAAO;;IAGZ,CAAC;AAEF,OAAIC,GAAW,UAAU,EAAE;AACzB,OAAS,aAAa;AACtB,YAAQ,KAAK,EAAE;;AAGjB,UAAQ,UAAqB,MAAM;;AAIrC,MAAI,CAAC,iBAAiB,KAAK,KAAK,EAAE;AAChC,MAAS,2EAA2E;AACpF,WAAQ,KAAK,EAAE;;EAIjB,MAAM,YAAY,KAAK,YAAY,YAAY,KAAK;AACpD,MAAI;AACF,SAAM,QAAQ,UAAU;AACxB,MAAS,YAAY,KAAK,+BAA+B,KAAK,GAAG;AACjE,WAAQ,KAAK,EAAE;UACT;AAKR,QAAM,MAAM,WAAW,EAAE,WAAW,MAAM,CAAC;AAI3C,QAAM,oBADc,KAAK,WAAW,aAAa,WAAW,UAAU,EAC/B,WAAW,EAAE,MAAM,CAAC;AAE3D,KAAQ,YAAY,KAAK,wBAAwB,KAAK,GAAG;;CAE5D,CAAC;;;;AAKF,eAAe,oBACb,WACA,WACA,WACe;CACf,MAAM,UAAU,MAAM,QAAQ,WAAW,EAAE,eAAe,MAAM,CAAC;AAEjE,MAAK,MAAM,SAAS,SAAS;EAC3B,MAAM,aAAa,KAAK,WAAW,MAAM,KAAK;EAC9C,MAAM,aAAa,KAAK,WAAW,MAAM,KAAK;AAE9C,MAAI,MAAM,aAAa,EAAE;AACvB,SAAM,MAAM,YAAY,EAAE,WAAW,MAAM,CAAC;AAC5C,SAAM,oBAAoB,YAAY,YAAY,UAAU;SACvD;GAEL,MAAM,UAAU,MAAM,SAAS,YAAY,QAAQ;AAMnD,SAAM,UAAU,YAHEC,mBAAW,QAAQ,SAAS,EAAE,UAAU,MAAM,CAAC,CAAC,UAAU,EAGrC,QAAQ"}
+{"version":3,"file":"create-BkpEXaht.mjs","names":["p.text","p.isCancel","Handlebars"],"sources":["../src/commands/profile/create.ts"],"sourcesContent":["import { mkdir, readFile, readdir, writeFile } from \"node:fs/promises\";\nimport { dirname, join } from \"node:path\";\nimport { fileURLToPath } from \"node:url\";\nimport { KEBAB_CASE_REGEX } from \"@baton-dx/core\";\nimport * as p from \"@clack/prompts\";\nimport { defineCommand } from \"citty\";\nimport Handlebars from \"handlebars\";\nimport { findSourceRoot } from \"../../utils/context-detection.js\";\n\nconst __dirname = dirname(fileURLToPath(import.meta.url));\n\nexport const createCommand = defineCommand({\n  meta: {\n    name: \"create\",\n    description: \"Create a new profile in your source repository\",\n  },\n  args: {\n    name: {\n      type: \"positional\",\n      description: \"Profile name (kebab-case)\",\n      required: false,\n    },\n  },\n  async run({ args }) {\n    p.intro(\"Create Profile\");\n\n    // Check for baton.source.yaml in current or parent directories\n    const sourceRoot = await findSourceRoot();\n    if (!sourceRoot) {\n      p.cancel(\"This command must be run inside a source directory (baton.source.yaml not found)\");\n      process.exit(1);\n    }\n\n    // Get profile name — from argument or wizard prompt\n    let name = args.name as string | undefined;\n\n    if (!name) {\n      const nameInput = await p.text({\n        message: \"Profile name (kebab-case)\",\n        placeholder: \"e.g., backend, frontend, my-profile\",\n        validate(value) {\n          if (!value || value.trim().length === 0) {\n            return \"Profile name is required\";\n          }\n          if (!KEBAB_CASE_REGEX.test(value.trim())) {\n            return \"Profile name must be in kebab-case (e.g., my-profile, backend, frontend)\";\n          }\n        },\n      });\n\n      if (p.isCancel(nameInput)) {\n        p.cancel(\"Cancelled.\");\n        process.exit(0);\n      }\n\n      name = (nameInput as string).trim();\n    }\n\n    // Validate name format (kebab-case)\n    if (!KEBAB_CASE_REGEX.test(name)) {\n      p.cancel(\"Profile name must be in kebab-case (e.g., my-profile, backend, frontend)\");\n      process.exit(1);\n    }\n\n    // Check if profile already exists in profiles/ directory\n    const targetDir = join(sourceRoot, \"profiles\", name);\n    try {\n      await readdir(targetDir);\n      p.cancel(`Profile '${name}' already exists in profiles/${name}/`);\n      process.exit(1);\n    } catch {\n      // Directory doesn't exist - good to proceed\n    }\n\n    // Create profile directory\n    await mkdir(targetDir, { recursive: true });\n\n    // Copy minimal template files\n    const templateDir = join(__dirname, \"templates\", \"profile\", \"minimal\");\n    await copyProfileTemplate(templateDir, targetDir, { name });\n\n    p.outro(`Profile '${name}' created in profiles/${name}/`);\n  },\n});\n\n/**\n * Recursively copy profile template with variable substitution\n */\nasync function copyProfileTemplate(\n  sourceDir: string,\n  targetDir: string,\n  variables: { name: string },\n): Promise<void> {\n  const entries = await readdir(sourceDir, { withFileTypes: true });\n\n  for (const entry of entries) {\n    const sourcePath = join(sourceDir, entry.name);\n    const targetPath = join(targetDir, entry.name);\n\n    if (entry.isDirectory()) {\n      await mkdir(targetPath, { recursive: true });\n      await copyProfileTemplate(sourcePath, targetPath, variables);\n    } else {\n      // Read file content\n      const content = await readFile(sourcePath, \"utf-8\");\n\n      // Apply Handlebars substitution for text files\n      const processed = Handlebars.compile(content, { noEscape: true })(variables);\n\n      // Write processed content\n      await writeFile(targetPath, processed, \"utf-8\");\n    }\n  }\n}\n"],"mappings":";;;;;;;;;;;;AASA,MAAM,YAAY,QAAQ,cAAc,OAAO,KAAK,IAAI,CAAC;AAEzD,MAAa,gBAAgB,cAAc;CACzC,MAAM;EACJ,MAAM;EACN,aAAa;EACd;CACD,MAAM,EACJ,MAAM;EACJ,MAAM;EACN,aAAa;EACb,UAAU;EACX,EACF;CACD,MAAM,IAAI,EAAE,QAAQ;AAClB,KAAQ,iBAAiB;EAGzB,MAAM,aAAa,MAAM,gBAAgB;AACzC,MAAI,CAAC,YAAY;AACf,MAAS,mFAAmF;AAC5F,WAAQ,KAAK,EAAE;;EAIjB,IAAI,OAAO,KAAK;AAEhB,MAAI,CAAC,MAAM;GACT,MAAM,YAAY,MAAMA,GAAO;IAC7B,SAAS;IACT,aAAa;IACb,SAAS,OAAO;AACd,SAAI,CAAC,SAAS,MAAM,MAAM,CAAC,WAAW,EACpC,QAAO;AAET,SAAI,CAAC,iBAAiB,KAAK,MAAM,MAAM,CAAC,CACtC,QAAO;;IAGZ,CAAC;AAEF,OAAIC,GAAW,UAAU,EAAE;AACzB,OAAS,aAAa;AACtB,YAAQ,KAAK,EAAE;;AAGjB,UAAQ,UAAqB,MAAM;;AAIrC,MAAI,CAAC,iBAAiB,KAAK,KAAK,EAAE;AAChC,MAAS,2EAA2E;AACpF,WAAQ,KAAK,EAAE;;EAIjB,MAAM,YAAY,KAAK,YAAY,YAAY,KAAK;AACpD,MAAI;AACF,SAAM,QAAQ,UAAU;AACxB,MAAS,YAAY,KAAK,+BAA+B,KAAK,GAAG;AACjE,WAAQ,KAAK,EAAE;UACT;AAKR,QAAM,MAAM,WAAW,EAAE,WAAW,MAAM,CAAC;AAI3C,QAAM,oBADc,KAAK,WAAW,aAAa,WAAW,UAAU,EAC/B,WAAW,EAAE,MAAM,CAAC;AAE3D,KAAQ,YAAY,KAAK,wBAAwB,KAAK,GAAG;;CAE5D,CAAC;;;;AAKF,eAAe,oBACb,WACA,WACA,WACe;CACf,MAAM,UAAU,MAAM,QAAQ,WAAW,EAAE,eAAe,MAAM,CAAC;AAEjE,MAAK,MAAM,SAAS,SAAS;EAC3B,MAAM,aAAa,KAAK,WAAW,MAAM,KAAK;EAC9C,MAAM,aAAa,KAAK,WAAW,MAAM,KAAK;AAE9C,MAAI,MAAM,aAAa,EAAE;AACvB,SAAM,MAAM,YAAY,EAAE,WAAW,MAAM,CAAC;AAC5C,SAAM,oBAAoB,YAAY,YAAY,UAAU;SACvD;GAEL,MAAM,UAAU,MAAM,SAAS,YAAY,QAAQ;AAMnD,SAAM,UAAU,YAHEC,mBAAW,QAAQ,SAAS,EAAE,UAAU,MAAM,CAAC,CAAC,UAAU,EAGrC,QAAQ"}

package/dist/index.mjs

@@ -1,13 +1,12 @@
 #!/usr/bin/env node
 import { r as __toESM } from "./chunk-BbwQpWto.mjs";
 import { a as Ne, c as Ve, d as bt, f as je, g as runMain, h as defineCommand, i as Le, l as We, m as require_dist, o as R, p as Ct, r as Je, s as Re, t as findSourceRoot, u as Ze } from "./context-detection-DqOTnD6_.mjs";
-import { $ as getAgentConfig, A as discoverProfilesInSourceRepo, B as getRegisteredIdePlatforms, C as isLockedProfile, D as resolveProfileChain, E as resolveProfileSupport, F as resolveVersion, G as parseFrontmatter, H as isKnownIdePlatform, I as cloneGitSource, J as loadProfileManifest, K as parseSource, L as collectProfileSupportPatterns, M as generateLock, N as readLock, O as detectLegacyPaths, P as writeLock, Q as SourceParseError, R as updateGitignore, S as getProfileWeight, T as mergeContentParts, U as getAdaptersForKeys, V as idePlatformRegistry, W as getAllAdapters, X as KEBAB_CASE_REGEX, Y as loadProjectManifest, Z as FileNotFoundError, _ as mergeMemoryWithWarnings, a as clearIdeCache, b as mergeSkills, c as getDefaultGlobalSource, d as getGlobalSources, et as getAgentPath, f as removeGlobalSource, g as mergeMemory, h as require_lib, i as computeIntersection, j as findSourceManifest, k as placeFile, l as getGlobalAiTools, m as setGlobalIdePlatforms, n as readProjectPreferences, o as detectInstalledIdes, p as setGlobalAiTools, q as loadLockfile, r as writeProjectPreferences, s as addGlobalSource, t as resolvePreferences, tt as getAllAgentKeys, u as getGlobalIdePlatforms, v as mergeRules, w as sortProfilesByWeight, x as mergeSkillsWithWarnings, y as mergeRulesWithWarnings, z as getIdePlatformTargetDir } from "./src-BgiJfm14.mjs";
+import { $ as loadProfileManifest, A as detectLegacyPaths, B as collectComprehensivePatterns, C as mergeSkillsWithWarnings, D as mergeContentParts, E as sortProfilesByWeight, F as generateLock, G as getRegisteredIdePlatforms, H as removeGitignoreManagedSection, I as readLock, J as getAdaptersForKeys, K as idePlatformRegistry, L as writeLock, M as discoverProfilesInSourceRepo, N as findSourceManifest, O as resolveProfileSupport, P as removePlacedFiles, Q as loadLockfile, R as resolveVersion, S as mergeSkills, T as isLockedProfile, U as updateGitignore, V as ensureBatonDirGitignored, W as getIdePlatformTargetDir, X as parseFrontmatter, Y as getAllAdapters, Z as parseSource, _ as require_lib, a as clearIdeCache, at as getAgentPath, b as mergeRules, c as getBatonHome, d as getGlobalConfigPath, et as loadProjectManifest, f as getGlobalIdePlatforms, g as setGlobalIdePlatforms, h as setGlobalAiTools, i as computeIntersection, it as getAgentConfig, j as placeFile, k as resolveProfileChain, l as getDefaultGlobalSource, m as removeGlobalSource, n as readProjectPreferences, nt as FileNotFoundError, o as detectInstalledIdes, ot as getAllAgentKeys, p as getGlobalSources, q as isKnownIdePlatform, r as writeProjectPreferences, rt as SourceParseError, s as addGlobalSource, t as resolvePreferences, tt as KEBAB_CASE_REGEX, u as getGlobalAiTools, v as mergeMemory, w as getProfileWeight, x as mergeRulesWithWarnings, y as mergeMemoryWithWarnings, z as cloneGitSource } from "./src-BCGnnv5D.mjs";
 import { n as detectInstalledAgents, t as clearAgentCache } from "./agent-detection-DTiVeO5W.mjs";
 import { d as esm_default } from "./esm-BagM-kVd.mjs";
-import { access, mkdir, readFile, readdir, rm, rmdir, stat, unlink, writeFile } from "node:fs/promises";
-import { dirname, join, resolve } from "node:path";
+import { access, mkdir, readFile, readdir, rm, stat, writeFile } from "node:fs/promises";
+import { dirname, isAbsolute, join, relative, resolve } from "node:path";
 import { fileURLToPath } from "node:url";
-import { homedir } from "node:os";
 
 //#region src/commands/ai-tools/configure.ts
 const aiToolsConfigureCommand = defineCommand({
@@ -421,7 +420,6 @@ function formatIntersectionSummary(intersection) {
 
 //#endregion
 //#region src/commands/config.ts
-const CONFIG_FILE = join(homedir(), ".baton", "config.yaml");
 const VALID_KEYS = [
 	"cache-dir",
 	"default-scope",
@@ -429,16 +427,18 @@ const VALID_KEYS = [
 	"default-tools"
 ];
 async function loadConfig() {
+	const configFile = getGlobalConfigPath();
 	try {
-		await access(CONFIG_FILE);
+		await access(configFile);
 	} catch {
 		return {};
 	}
-	return (0, import_dist.parse)(await readFile(CONFIG_FILE, "utf-8"));
+	return (0, import_dist.parse)(await readFile(configFile, "utf-8"));
 }
 async function saveConfig(config) {
-	await mkdir(dirname(CONFIG_FILE), { recursive: true });
-	await writeFile(CONFIG_FILE, (0, import_dist.stringify)(config), "utf-8");
+	const configFile = getGlobalConfigPath();
+	await mkdir(getBatonHome(), { recursive: true });
+	await writeFile(configFile, (0, import_dist.stringify)(config), "utf-8");
 }
 async function showDashboard() {
 	We("Baton Dashboard");
@@ -1650,7 +1650,22 @@ const initCommand = defineCommand({
 			}
 		}
 		await showProfileIntersections(profileSources);
-		const yamlContent = (0, import_dist.stringify)({ profiles: profileSources.map((source) => ({ source })) });
+		let gitignoreSetting = true;
+		if (isInteractive) {
+			const shouldGitignore = await Re({
+				message: "Add synced AI tool and IDE config files to .gitignore?",
+				initialValue: true
+			});
+			if (Ct(shouldGitignore)) {
+				Ne("Setup cancelled.");
+				process.exit(0);
+			}
+			gitignoreSetting = shouldGitignore;
+		}
+		const yamlContent = (0, import_dist.stringify)({
+			profiles: profileSources.map((source) => ({ source })),
+			gitignore: gitignoreSetting
+		});
 		spinner.start("Creating baton.yaml...");
 		await writeFile(join(cwd, "baton.yaml"), yamlContent, "utf-8");
 		spinner.stop("✅ Created baton.yaml");
@@ -1660,10 +1675,11 @@ const initCommand = defineCommand({
 		try {
 			gitignoreContent = await readFile(gitignorePath, "utf-8");
 		} catch (_error) {}
-		if (!gitignoreContent.includes(".baton/")) {
-			await writeFile(gitignorePath, gitignoreContent ? `${gitignoreContent}\n\n# Baton cache\n.baton/\n` : "# Baton cache\n.baton/\n", "utf-8");
-			spinner.stop("✅ Added .baton/ to .gitignore");
-		} else spinner.stop("✅ .gitignore already contains .baton/");
+		if (!gitignoreContent.includes(".baton/")) await writeFile(gitignorePath, gitignoreContent ? `${gitignoreContent}\n\n# Baton cache\n.baton/\n` : "# Baton cache\n.baton/\n", "utf-8");
+		if (gitignoreSetting) {
+			await updateGitignore(cwd, collectComprehensivePatterns({ fileTargets: [] }));
+			spinner.stop("✅ Updated .gitignore with managed file patterns");
+		} else spinner.stop("✅ Added .baton/ to .gitignore");
 		spinner.start("Creating .baton directory...");
 		try {
 			await mkdir(join(cwd, ".baton"), { recursive: true });
@@ -1965,13 +1981,33 @@ async function handleRemoveBaton(cwd) {
 		R.warn("Cancelled.");
 		return false;
 	}
+	const lockPath = join(cwd, "baton.lock");
+	await cleanupPlacedFilesFromLock(lockPath, cwd);
 	await rm(join(cwd, "baton.yaml"), { force: true });
-	await rm(join(cwd, "baton.lock"), { force: true });
+	await rm(lockPath, { force: true });
 	R.success("Baton has been removed from this project.");
-	R.info("Note: Synced files (rules, skills, memory) were not removed.");
-	R.info("Run 'baton sync' before removing to clean up, or delete them manually.");
 	return true;
 }
+async function cleanupPlacedFilesFromLock(lockPath, projectRoot) {
+	let placedPaths;
+	try {
+		const lockfile = await readLock(lockPath);
+		placedPaths = Object.values(lockfile.packages).flatMap((pkg) => Object.keys(pkg.integrity));
+	} catch (error) {
+		if (error instanceof FileNotFoundError) return;
+		return;
+	}
+	if (placedPaths.length === 0) return;
+	R.info(`Found ${placedPaths.length} placed file(s):`);
+	for (const filePath of placedPaths) R.info(`  ${filePath}`);
+	const shouldClean = await Re({
+		message: `Also remove ${placedPaths.length} placed file(s)?`,
+		initialValue: false
+	});
+	if (Ct(shouldClean) || !shouldClean) return;
+	const removedCount = await removePlacedFiles(placedPaths, projectRoot);
+	R.success(`Removed ${removedCount} placed file(s).`);
+}
 function formatIdeName(ideKey) {
 	return {
 		vscode: "VS Code",
@@ -2112,6 +2148,31 @@ async function handleConfigureIdes(cwd) {
 	});
 	R.success(`Project configured with ${selectedKeys.length} IDE platform(s).`);
 }
+async function handleConfigureGitignore(cwd) {
+	const manifestPath = join(cwd, "baton.yaml");
+	const manifest = await loadProjectManifestSafe(cwd);
+	if (!manifest) {
+		R.error("Could not load baton.yaml");
+		return;
+	}
+	const currentSetting = manifest.gitignore !== false;
+	R.info(currentSetting ? "Currently: synced files ARE gitignored" : "Currently: synced files are NOT gitignored (committed to repo)");
+	const newSetting = await Re({
+		message: "Add synced AI tool and IDE config files to .gitignore?",
+		initialValue: currentSetting
+	});
+	if (Ct(newSetting)) {
+		R.warn("Cancelled.");
+		return;
+	}
+	if (newSetting === currentSetting) {
+		R.info("No change.");
+		return;
+	}
+	manifest.gitignore = newSetting;
+	await writeFile(manifestPath, (0, import_dist.stringify)(manifest), "utf-8");
+	R.success(newSetting ? "Enabled .gitignore management. Run 'baton sync' to update." : "Disabled .gitignore management. Run 'baton sync' to clean up.");
+}
 const manageCommand = defineCommand({
 	meta: {
 		name: "manage",
@@ -2154,6 +2215,11 @@ const manageCommand = defineCommand({
 						label: "Configure IDEs for this project",
 						hint: "Choose which IDEs to sync"
 					},
+					{
+						value: "configure-gitignore",
+						label: "Configure .gitignore",
+						hint: "Choose whether synced files are gitignored"
+					},
 					{
 						value: "remove-baton",
 						label: "Remove Baton",
@@ -2189,6 +2255,10 @@ const manageCommand = defineCommand({
 				console.log("");
 				await handleConfigureIdes(cwd);
 				console.log("");
+			} else if (action === "configure-gitignore") {
+				console.log("");
+				await handleConfigureGitignore(cwd);
+				console.log("");
 			} else if (action === "remove-baton") {
 				console.log("");
 				if (await handleRemoveBaton(cwd)) {
@@ -2209,8 +2279,8 @@ const profileCommand = defineCommand({
 		description: "Manage profiles (create, list, remove)"
 	},
 	subCommands: {
-		create: () => import("./create-BG_VVOTI.mjs").then((m) => m.createCommand),
-		list: () => import("./list-CCzjta6J.mjs").then((m) => m.profileListCommand),
+		create: () => import("./create-BkpEXaht.mjs").then((m) => m.createCommand),
+		list: () => import("./list-DSLwzhBG.mjs").then((m) => m.profileListCommand),
 		remove: () => import("./remove-BBs6Mv8t.mjs").then((m) => m.profileRemoveCommand)
 	}
 });
@@ -2668,35 +2738,25 @@ async function copyDirectoryRecursive(sourceDir, targetDir) {
 	return placed;
 }
 /**
-* Collect profile-support-based .gitignore patterns and update .gitignore.
-* Uses ALL tools the profile supports (not just the developer's intersection)
-* to ensure consistent .gitignore across all team members.
+* Handle .gitignore update based on the project manifest's gitignore setting.
+*
+* When gitignore is enabled (default): writes comprehensive patterns for ALL
+* known AI tools and IDE platforms to ensure stable, dev-independent content.
+* When disabled: removes any existing managed section.
+* Always ensures .baton/ is gitignored regardless of setting.
 */
-async function updateGitignorePatterns(params) {
-	const { allIntersections, adapters, ideMap, mergedSkills, mergedRules, mergedMemory, mergedCommandCount, fileMap, projectRoot, spinner } = params;
-	const profileSupportedAiTools = /* @__PURE__ */ new Set();
-	const profileSupportedIdePlatforms = /* @__PURE__ */ new Set();
-	if (allIntersections) for (const intersection of allIntersections.values()) {
-		for (const tool of intersection.aiTools.synced) profileSupportedAiTools.add(tool);
-		for (const tool of intersection.aiTools.unavailable) profileSupportedAiTools.add(tool);
-		for (const plat of intersection.idePlatforms.synced) profileSupportedIdePlatforms.add(plat);
-		for (const plat of intersection.idePlatforms.unavailable) profileSupportedIdePlatforms.add(plat);
-	}
-	else {
-		for (const adapter of adapters) profileSupportedAiTools.add(adapter.key);
-		for (const entry of ideMap.values()) profileSupportedIdePlatforms.add(entry.ideKey);
-	}
-	const hasContent = mergedSkills.length > 0 || mergedRules.length > 0 || mergedMemory.length > 0 || mergedCommandCount > 0;
-	const gitignorePatterns = collectProfileSupportPatterns({
-		profileAiTools: [...profileSupportedAiTools],
-		profileIdePlatforms: [...profileSupportedIdePlatforms],
-		fileTargets: [...fileMap.values()].map((f) => f.target),
-		hasContent
-	});
-	if (gitignorePatterns.length > 0) {
+async function handleGitignoreUpdate(params) {
+	const { projectManifest, fileMap, projectRoot, spinner } = params;
+	const gitignoreEnabled = projectManifest.gitignore !== false;
+	await ensureBatonDirGitignored(projectRoot);
+	if (gitignoreEnabled) {
 		spinner.start("Updating .gitignore...");
-		const updated = await updateGitignore(projectRoot, gitignorePatterns);
-		spinner.stop(updated ? "Updated .gitignore with synced patterns" : ".gitignore already up to date");
+		const updated = await updateGitignore(projectRoot, collectComprehensivePatterns({ fileTargets: [...fileMap.values()].map((f) => f.target) }));
+		spinner.stop(updated ? "Updated .gitignore with managed patterns" : ".gitignore already up to date");
+	} else {
+		spinner.start("Checking .gitignore...");
+		const removed = await removeGitignoreManagedSection(projectRoot);
+		spinner.stop(removed ? "Removed managed section from .gitignore" : ".gitignore unchanged");
 	}
 }
 /**
@@ -2750,23 +2810,7 @@ async function cleanupOrphanedFiles(params) {
 		return;
 	}
 	spinner.start("Removing orphaned files...");
-	let removedCount = 0;
-	for (const orphanedPath of orphanedPaths) {
-		const absolutePath = orphanedPath.startsWith("/") ? orphanedPath : resolve(projectRoot, orphanedPath);
-		try {
-			await unlink(absolutePath);
-			removedCount++;
-			let dir = dirname(absolutePath);
-			while (dir !== projectRoot && dir.startsWith(projectRoot)) try {
-				if ((await readdir(dir)).length === 0) {
-					await rmdir(dir);
-					dir = dirname(dir);
-				} else break;
-			} catch {
-				break;
-			}
-		} catch {}
-	}
+	const removedCount = await removePlacedFiles(orphanedPaths, projectRoot);
 	spinner.stop(`Removed ${removedCount} orphaned file(s)`);
 }
 const syncCommand = defineCommand({
@@ -3214,9 +3258,10 @@ const syncCommand = defineCommand({
 				const combinedContent = entry.parts.join("\n\n");
 				const result = await placeFile(combinedContent, entry.adapter, entry.type, "project", entry.name, placementConfig);
 				if (result.action !== "skipped") stats.created++;
+				const relPath = isAbsolute(result.path) ? relative(projectRoot, result.path) : result.path;
 				for (const profileName of entry.profiles) {
 					const pf = getOrCreatePlacedFiles(placedFiles, profileName);
-					pf[result.path] = {
+					pf[relPath] = {
 						content: combinedContent,
 						tool: entry.adapter.key,
 						category: "ai"
@@ -3246,8 +3291,9 @@ const syncCommand = defineCommand({
 						}
 						const result = await placeFile(content, adapter, "commands", "project", commandName, placementConfig);
 						if (result.action !== "skipped") stats.created++;
+						const cmdRelPath = isAbsolute(result.path) ? relative(projectRoot, result.path) : result.path;
 						const pf = getOrCreatePlacedFiles(placedFiles, profile.name);
-						pf[result.path] = {
+						pf[cmdRelPath] = {
 							content,
 							tool: adapter.key,
 							category: "ai"
@@ -3321,14 +3367,8 @@ const syncCommand = defineCommand({
 				stats.errors++;
 			}
 			spinner.stop(dryRun ? `Would place files for ${adapters.length} agent(s)` : `Placed ${stats.created} file(s) for ${adapters.length} agent(s)`);
-			if (!dryRun) await updateGitignorePatterns({
-				allIntersections,
-				adapters,
-				ideMap,
-				mergedSkills,
-				mergedRules,
-				mergedMemory,
-				mergedCommandCount,
+			if (!dryRun) await handleGitignoreUpdate({
+				projectManifest,
 				fileMap,
 				projectRoot,
 				spinner