npm - @bastani/atomic - Versions diffs - 0.9.11-alpha.4 → 0.9.11-alpha.6 - Mend

@bastani/atomic 0.9.11-alpha.4 → 0.9.11-alpha.6

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1032) hide show

package/dist/core/atomic-guide-command.js CHANGED Viewed

@@ -25,17 +25,22 @@ Atomic turns non-trivial work into executable, inspectable workflows. Default to
 | On-call / broken behavior | Use a focused workflow to reproduce, diagnose, repair, and validate; direct debugger/subagent calls remain useful as stages or for tiny deterministic diagnosis |
 | Research → spec → implementation | Chain \`/skill:research-codebase\` → \`/skill:create-spec\` → a named or custom implementation workflow with explicit validation and review |
 | Testing / regression hardening | Use a workflow for test/fix loops so retries, evidence, and the passing stop condition are tracked |
-| Large repo discovery | Run \`/parallel codebase-locator "map the area" -> codebase-analyzer "trace the current flow" -> codebase-pattern-finder "find patterns" --bg\`, or \`/workflow deep-research-codebase\` for whole-repo synthesis |
+| Large repo discovery | Run \`/parallel codebase-locator "map the area" -> codebase-analyzer "trace the current flow" -> codebase-pattern-finder "find patterns" --bg\`, or use repository-focused \`fan-out-and-synthesize\` branches plus a synthesis barrier |
 | UI / product polish | Run \`/skill:impeccable\` for interface critique and refinement, or \`/workflow open-claude-design\` for generation + refinement loops |
 ## Built-in workflows
 | Workflow | When to use | How to run |
 |---|---|---|
-| \`deep-research-codebase\` | broad repo or cross-cutting research before you decide what to change (for one area, use \`/skill:research-codebase\`; this indexes the whole repo) | \`/workflow deep-research-codebase prompt="How do payment retries work end to end?"\` |
-| \`goal\` | autonomous work that benefits from a durable goal ledger, bounded worker turns, named validation, and reviewer-gated completion; add \`create_pr=true\` only for final PR handoff after approval | \`/workflow goal objective="Implement specs/<date>-<topic>.md, run focused tests, and validate the changed behavior"\` |
-| \`ralph\` | autonomous work that benefits from a durable research-first pipeline, delegated implementation, and iterative review | \`/workflow ralph prompt="Migrate the database layer to Drizzle" create_pr=true\` |
-| \`open-claude-design\` | UI and design-system work that benefits from generation and refinement loops | \`/workflow open-claude-design prompt="Refresh the settings page hierarchy"\` |
+| \`classify-and-act\` | structured routing with a low-confidence human fallback | \`/workflow classify-and-act prompt="Triage this request"\` |
+| \`fan-out-and-synthesize\` | independent slices or repository-focused research with artifact synthesis | \`/workflow fan-out-and-synthesize prompt="Map payment retries by subsystem"\` |
+| \`adversarial-verification\` | fresh verification and bounded repair of a candidate | \`/workflow adversarial-verification task="Verify the migration patch"\` |
+| \`generate-and-filter\` | generate many candidates and keep a distinct shortlist | \`/workflow generate-and-filter prompt="Propose command names"\` |
+| \`tournament\` | compare whole solutions through balanced pairwise judging | \`/workflow tournament prompt="Design the retry strategy"\` |
+| \`loop-until-done\` | iterate until explicit evidence passes or the bound is exhausted | \`/workflow loop-until-done prompt="Repair failures until tests pass"\` |
+| \`goal\` | ledger-backed autonomous work with receipts and reviewer-gated completion | \`/workflow goal objective="Update CLI docs and validate the docs build"\` |
+| \`ralph\` | research-first delegated implementation with bounded multi-model review | \`/workflow ralph prompt="Implement specs/rate-limit.md"\` |
+| \`open-claude-design\` | UI and design-system generation and refinement | \`/workflow open-claude-design prompt="Refresh the settings page hierarchy"\` |
 Use \`/workflow list\` to see what is available and \`/workflow inputs <name>\` to inspect inputs in your environment.
@@ -82,9 +87,9 @@ Use \`/skill:research-codebase\` for a scoped area, subsystem, or directory:
 \`/skill:research-codebase how the rate limiter works in src/middleware/\`
-Use \`deep-research-codebase\` when the answer spans the whole repo or a cross-cutting implementation path:
+For repository-wide research, use \`fan-out-and-synthesize\` with distinct subsystem partitions, artifact outputs, and a synthesis prompt that cites concrete paths:
-\`/workflow deep-research-codebase prompt="How do payment retries work end to end?"\`
+\`/workflow fan-out-and-synthesize prompt="Partition payment retries by subsystem and synthesize cited end-to-end findings"\`
 If the research prompt is vague, tighten it first with \`/skill:prompt-engineer\`:
@@ -100,25 +105,15 @@ Skip this if the implementation request is already precise.
 Default to a workflow for non-trivial implementation and review. Use direct chat only for tiny deterministic low-risk edits; use focused subagents inside workflow stages or for bounded specialist passes. Choose an installed workflow when it fits, or author a custom TypeScript workflow inline from the starter patterns when the task needs a richer graph.
-For work that fits a durable goal ledger, bounded worker turns, and reviewer-gated completion, use \`goal\`:
+For implementation with review built in, author a task-specific worker → fresh verifier → reducer loop. Give it literal acceptance criteria, deterministic checks, evidence-backed repair payloads, and a bounded stop condition:
-\`/workflow goal objective="Implement specs/<date>-<topic>.md, run focused tests, and finish when the documented behavior is validated"\`
+\`Create and run a workflow that implements specs/<date>-<topic>.md, runs focused tests, sends the patch to fresh verifiers, and repairs findings until the documented behavior passes or the iteration bound is reached.\`
-Loop or stop-condition phrasing is a key workflow signal. When the user delegates a loop such as \`do X until Y\`, \`repeat until\`, \`iterate until\`, \`review/fix until passing\`, \`run checks and fix until green\`, or \`keep going until done\`, make the stop condition explicit in the Goal objective:
-\`/workflow goal objective="Fix the flaky checkout test, adjust the smallest necessary code, and finish when the focused test passes three times"\`
-When a clearly delegated autonomous job benefits from a durable research-first pipeline with orchestration and iterative review, use \`ralph\`:
-\`/workflow ralph prompt="Migrate the database layer to Drizzle"\`
-Add \`create_pr=true\` only when you want the final pull-request stage and report after the review gate approves.
+Loop or stop-condition phrasing is a key workflow signal. Encode \`do X until Y\`, \`review/fix until passing\`, or \`run checks and fix until green\` as explicit bounded workflow gates rather than informal retries.
 ## 4. Decide and land
-If you used \`goal\`, the workflow already persisted receipts in a goal ledger and reviewer-gated completion. Use its final status — \`complete\`, \`blocked\`, or \`needs_human\` — plus the remaining-work report to decide whether to ship, unblock, or clarify. If you enabled \`create_pr=true\`, use its final pull-request report to decide whether to ship or iterate again.
-If you used \`ralph\`, the workflow transformed the prompt into a research question, researched the codebase, delegated implementation through sub-agents, reviewed, and iterated. If you enabled \`create_pr=true\`, use its final pull-request report to decide whether to ship or iterate again.
+Use the workflow's deterministic evidence, verifier decision, remaining-work report, and bound-exhaustion state to decide whether to ship, repair, unblock, or clarify. Keep PR/MR creation, deployment, and publication as separately authorized post-approval actions.
 If you implemented directly instead of using a workflow, you can still run:
@@ -144,14 +139,17 @@ Workflow-first is not builtin-only or monolithic. Atomic can author custom TypeS
 | Workflow | When to use | How to run |
 |---|---|---|
-| \`deep-research-codebase\` | broad repo or cross-cutting research before you decide what to change (for one area, use \`/skill:research-codebase\`; this indexes the whole repo) | \`/workflow deep-research-codebase prompt="How do payment retries work end to end?"\` |
-| \`goal\` | autonomous work that benefits from a durable goal ledger, bounded worker turns, named validation, and reviewer-gated completion; add \`create_pr=true\` only for final PR handoff after approval | \`/workflow goal objective="Update the CLI docs, include one usage example, and verify the docs build passes"\` |
-| \`ralph\` | autonomous work that benefits from a durable research-first pipeline, delegated implementation, and iterative review | \`/workflow ralph prompt="Migrate the database layer to Drizzle" create_pr=true\` |
-| \`open-claude-design\` | frontend and product design work | \`/workflow open-claude-design prompt="Refresh the settings page hierarchy"\` |
-Use \`/workflow inputs <name>\` to inspect the exact inputs in your environment.
-Use \`/skill:research-codebase ...\` when you want research on one subsystem, directory, or focused question. Use \`/workflow deep-research-codebase ...\` when the answer needs end-to-end tracing across many parts of the repo.
+| \`classify-and-act\` | structured routing | \`/workflow classify-and-act prompt="Triage this request"\` |
+| \`fan-out-and-synthesize\` | independent slices or repository research | \`/workflow fan-out-and-synthesize prompt="Map payment retries by subsystem"\` |
+| \`adversarial-verification\` | fresh verification and bounded repair | \`/workflow adversarial-verification task="Verify the patch"\` |
+| \`generate-and-filter\` | candidate generation and shortlisting | \`/workflow generate-and-filter prompt="Propose command names"\` |
+| \`tournament\` | balanced whole-solution comparison | \`/workflow tournament prompt="Design the retry strategy"\` |
+| \`loop-until-done\` | bounded convergence on explicit evidence | \`/workflow loop-until-done prompt="Repair failures until tests pass"\` |
+| \`goal\` | durable ledger, bounded orchestration, and reviewer-gated completion | \`/workflow goal objective="Update CLI docs and validate the docs build"\` |
+| \`ralph\` | research-first delegated implementation and iterative review | \`/workflow ralph prompt="Implement specs/rate-limit.md"\` |
+| \`open-claude-design\` | frontend and product design | \`/workflow open-claude-design prompt="Refresh the settings page hierarchy"\` |
+Use \`/workflow inputs <name>\` to inspect exact inputs. Goal and Ralph skip PR creation unless \`create_pr=true\` explicitly authorizes their post-approval final stage. Use \`/skill:research-codebase\` for one focused subsystem and repository-focused \`fan-out-and-synthesize\` for independent whole-repository slices.
 If you are drafting research, reviewer, or synthesis prompts for a workflow, use \`/skill:prompt-engineer\` first. It is a good fit when a stage prompt feels vague, overloaded, or underspecified.
@@ -190,13 +188,13 @@ Why this is good:
 \`/workflow list\`
-\`/workflow inputs goal\`
+\`/workflow inputs fan-out-and-synthesize\`
-\`/workflow goal objective="Fix the settings form validation bug, add the focused test, and finish when invalid emails show the inline error without submitting"\`
+\`/workflow fan-out-and-synthesize prompt="Partition the settings flow by subsystem and synthesize cited findings"\`
-\`/workflow inputs ralph\`
+\`/workflow inputs adversarial-verification\`
-\`/workflow ralph prompt="Migrate the database layer to Drizzle" create_pr=true\`
+\`/workflow adversarial-verification task="Verify the settings form validation patch"\`
 \`/workflow status\`

package/dist/core/atomic-guide-command.js.map CHANGED Viewed

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Default to a workflow for implementation, build, debugging, bug fixes, migrations, features, scoped multi-file changes, and validated docs/code work, or whenever a request has dependencies, handoffs, uncertainty, review gates, measurable done criteria, or evidence requirements. Use direct chat for tiny deterministic low-risk answers or edits. Loop-shaped prompts such as \\`do X until Y\\`, \\`review/fix until passing\\`, or \\`run checks and fix until green\\` are especially strong workflow signals. Workflow-first is not builtin-only or monolithic: use named workflows, direct modes, author a custom TypeScript \\`workflow({...})\\` inline, or import reusable project/package and builtin definitions from \\`@bastani/workflows/builtin\\` and nest them with \\`ctx.workflow(...)\\`. Nested children may compose further children within \\`maxDepth\\`, enabling powerful research → implementation → verification → approval graphs from reusable parts. Start Atomic in a project with \\`atomic\\`, then talk to it normally. Use \\`@file\\` to attach files, \\`!command\\` to run shell output through the model, and \\`!!command\\` to run shell output without adding it to context.\n\n## Core session commands\n\n\| Command \| Use \|\n\|---\|---\|\n\| \\`/login\\` \| configure auth \|\n\| \\`/model\\` \| switch model \|\n\| \\`/settings\\` \| thinking level, theme, message delivery, transport \|\n\| \\`/new\\`, \\`/resume\\` \| start or resume sessions \|\n\| \\`/tree\\`, \\`/fork\\`, \\`/clone\\` \| branch or navigate session history \|\n\| \\`/compact\\` \| delete safe older context verbatim \|\n\| \\`/hotkeys\\`, \\`/changelog\\` \| local help and release notes \|\n\n## Examples of using Atomic\n\n\| Goal \| How to use \|\n\|---\|---\|\n\| On-call / broken behavior \| Use a focused workflow to reproduce, diagnose, repair, and validate; direct debugger/subagent calls remain useful as stages or for tiny deterministic diagnosis \|\n\| Research → spec → implementation \| Chain \\`/skill:research-codebase\\` → \\`/skill:create-spec\\` → a named or custom implementation workflow with explicit validation and review \|\n\| Testing / regression hardening \| Use a workflow for test/fix loops so retries, evidence, and the passing stop condition are tracked \|\n\| Large repo discovery \| Run \\`/parallel codebase-locator \"map the area\" -> codebase-analyzer \"trace the current flow\" -> codebase-pattern-finder \"find patterns\" --bg\\`, or \\`/workflow deep-research-codebase\\` for whole-repo synthesis \|\n\| UI / product polish \| Run \\`/skill:impeccable\\` for interface critique and refinement, or \\`/workflow open-claude-design\\` for generation + refinement loops \|\n\n## Built-in workflows\n\n\| Workflow \| When to use \| How to run \|\n\|---\|---\|---\|\n\| \\`deep-research-codebase\\` \| broad repo or cross-cutting research before you decide what to change (for one area, use \\`/skill:research-codebase\\`; this indexes the whole repo) \| \\`/workflow deep-research-codebase prompt=\"How do payment retries work end to end?\"\\` \|\n\| \\`goal\\` \| autonomous work that benefits from a durable goal ledger, bounded worker turns, named validation, and reviewer-gated completion; add \\`create_pr=true\\` only for final PR handoff after approval \| \\`/workflow goal objective=\"Implement specs/<date>-<topic>.md, run focused tests, and validate the changed behavior\"\\` \|\n\| \\`ralph\\` \| autonomous work that benefits from a durable research-first pipeline, delegated implementation, and iterative review \| \\`/workflow ralph prompt=\"Migrate the database layer to Drizzle\" create_pr=true\\` \|\n\| \\`open-claude-design\\` \| UI and design-system work that benefits from generation and refinement loops \| \\`/workflow open-claude-design prompt=\"Refresh the settings page hierarchy\"\\` \|\n\nUse \\`/workflow list\\` to see what is available and \\`/workflow inputs <name>\\` to inspect inputs in your environment.\n\n## Top skills\n\n\| Skill \| When to use \| How to run \|\n\|---\|---\|---\|\n\| \\`research-codebase\\` \| write a grounded research artifact for one subsystem or question \| \\`/skill:research-codebase how the rate limiter works in src/middleware/\\` \|\n\| \\`create-spec\\` \| turn research into an implementation-ready plan \| \\`/skill:create-spec from research/docs/<date>-<topic>.md\\` \|\n\| \\`tdd\\` \| do test-first feature or bug work \| \\`/skill:tdd\\` \|\n\| \\`prompt-engineer\\` \| tighten a vague prompt before a long run \| \\`/skill:prompt-engineer Draft a sharper implementation prompt for ...\\` \|\n\| \\`subagent\\` \| learn delegation patterns and exact \\`/run\\`, \\`/parallel\\`, and \\`/chain\\` usage \| \\`/skill:subagent\\` \|\n\| \\`impeccable\\` \| critique or refine frontend and product UI \| \\`/skill:impeccable\\` \|\n\n## Subagents\n\nSubagents are focused child Atomic sessions you can point at one job inside the repo.\n\n\| Built-in subagent \| Use \|\n\|---\|---\|\n\| \\`codebase-locator\\` \| find relevant files, tests, entrypoints, and configs \|\n\| \\`codebase-analyzer\\` \| explain current behavior with file:line refs \|\n\| \\`codebase-pattern-finder\\` \| find existing code to model after \|\n\| \\`debugger\\` \| reproduce, diagnose, and fix broken behavior \|\n\nHow the direct commands map to repo work:\n- \\`/run\\` = one specialist on one job, for example \\`/run codebase-locator \"Map the webhook retry flow\"\\`\n- \\`/parallel\\` = several independent specialists at once, for example \\`/parallel codebase-locator \"map retry files\" -> codebase-pattern-finder \"find existing retry/backoff patterns\" -> codebase-online-researcher \"research current retry guidance\" --bg\\`\n- \\`/chain\\` = ordered handoffs, for example \\`/chain codebase-locator \"find the auth files\" -> codebase-analyzer \"trace the auth flow\" -> debugger \"patch the failing auth edge case\"\\`\n\n─────────────────────────────────────────────────────────────────\n\nWhere to next:\n\n\\`/atomic example\\` — see the pieces used on a code task\n\\`/atomic workflows\\` — learn when to use workflows`;\n\nconst EXAMPLE = `# Practical example\n\nThis example shows a spec-driven development process whose clearly delegated autonomous implementation benefits from durable workflow execution. For interactive or conversation-led work, stay inline or use bounded subagents while the parent remains in control. Type the examples below into the Atomic TUI chat after starting \\`atomic\\` in your project.\n\n## 1. Research what exists\n\nUse \\`/skill:research-codebase\\` for a scoped area, subsystem, or directory:\n\n\\`/skill:research-codebase how the rate limiter works in src/middleware/\\`\n\nUse \\`deep-research-codebase\\` when the answer spans the whole repo or a cross-cutting implementation path:\n\n\\`/workflow deep-research-codebase prompt=\"How do payment retries work end to end?\"\\`\n\nIf the research prompt is vague, tighten it first with \\`/skill:prompt-engineer\\`:\n\n\\`/skill:prompt-engineer Draft a sharper repo-research prompt for understanding payment retries end to end, including retries, queues, and failure handling.\\`\n\n## 2. Create a spec when requirements are fuzzy\n\nSkip this if the implementation request is already precise.\n\n\\`/skill:create-spec from research/docs/<date>-<topic>.md\\`\n\n## 3. Implement with review built in\n\nDefault to a workflow for non-trivial implementation and review. Use direct chat only for tiny deterministic low-risk edits; use focused subagents inside workflow stages or for bounded specialist passes. Choose an installed workflow when it fits, or author a custom TypeScript workflow inline from the starter patterns when the task needs a richer graph.\n\nFor work that fits a durable goal ledger, bounded worker turns, and reviewer-gated completion, use \\`goal\\`:\n\n\\`/workflow goal objective=\"Implement specs/<date>-<topic>.md, run focused tests, and finish when the documented behavior is validated\"\\`\n\nLoop or stop-condition phrasing is a key workflow signal. When the user delegates a loop such as \\`do X until Y\\`, \\`repeat until\\`, \\`iterate until\\`, \\`review/fix until passing\\`, \\`run checks and fix until green\\`, or \\`keep going until done\\`, make the stop condition explicit in the Goal objective:\n\n\\`/workflow goal objective=\"Fix the flaky checkout test, adjust the smallest necessary code, and finish when the focused test passes three times\"\\`\n\nWhen a clearly delegated autonomous job benefits from a durable research-first pipeline with orchestration and iterative review, use \\`ralph\\`:\n\n\\`/workflow ralph prompt=\"Migrate the database layer to Drizzle\"\\`\n\nAdd \\`create_pr=true\\` only when you want the final pull-request stage and report after the review gate approves.\n\n## 4. Decide and land\n\nIf you used \\`goal\\`, the workflow already persisted receipts in a goal ledger and reviewer-gated completion. Use its final status — \\`complete\\`, \\`blocked\\`, or \\`needs_human\\` — plus the remaining-work report to decide whether to ship, unblock, or clarify. If you enabled \\`create_pr=true\\`, use its final pull-request report to decide whether to ship or iterate again.\n\nIf you used \\`ralph\\`, the workflow transformed the prompt into a research question, researched the codebase, delegated implementation through sub-agents, reviewed, and iterated. If you enabled \\`create_pr=true\\`, use its final pull-request report to decide whether to ship or iterate again.\n\nIf you implemented directly instead of using a workflow, you can still run:\n\n\\`/parallel-review current diff\\`\n\nAtomic will synthesize reviewer feedback and ask before applying fixes.\n\n─────────────────────────────────────────────────────────────────\n\nWhere to next:\n\n\\`/atomic workflows\\` — learn when to use workflows\n\\`/atomic overview\\` — quick refresh`;\n\nconst WORKFLOWS = `# Workflows primer\n\nA workflow is a TypeScript-defined pipeline exported from \\`workflow({...})\\`. It can run tasks, chains, parallel fan-out, human-in-the-loop prompts, background status, and model fallback chains.\n\nDefault to workflows for non-trivial work and requests with inherent structure plus a verifiable objective. Implementation, debugging, migrations, multi-file changes, validation, review, evidence requirements, and explicit stop conditions are workflow-shaped; use direct chat only for tiny deterministic low-risk answers or edits.\n\nWorkflow-first is not builtin-only or monolithic. Atomic can author custom TypeScript \\`workflow({...})\\` definitions inline, and workflows can import reusable project/package definitions or builtins from \\`@bastani/workflows/builtin\\`, then nest them with \\`ctx.workflow(...)\\`. Imported children can nest further children within \\`maxDepth\\`, so compose proven research, implementation, design, verification, and approval workflows instead of copying their stages. Use the documented starter patterns for classify-and-act routing, dynamic fan-out and synthesis, adversarial verification, candidate selection, and bounded convergence. Atomic writes the parent definition, reloads it, and runs the composed graph.\n\n## Built-in workflows\n\n\| Workflow \| When to use \| How to run \|\n\|---\|---\|---\|\n\| \\`deep-research-codebase\\` \| broad repo or cross-cutting research before you decide what to change (for one area, use \\`/skill:research-codebase\\`; this indexes the whole repo) \| \\`/workflow deep-research-codebase prompt=\"How do payment retries work end to end?\"\\` \|\n\| \\`goal\\` \| autonomous work that benefits from a durable goal ledger, bounded worker turns, named validation, and reviewer-gated completion; add \\`create_pr=true\\` only for final PR handoff after approval \| \\`/workflow goal objective=\"Update the CLI docs, include one usage example, and verify the docs build passes\"\\` \|\n\| \\`ralph\\` \| autonomous work that benefits from a durable research-first pipeline, delegated implementation, and iterative review \| \\`/workflow ralph prompt=\"Migrate the database layer to Drizzle\" create_pr=true\\` \|\n\| \\`open-claude-design\\` \| frontend and product design work \| \\`/workflow open-claude-design prompt=\"Refresh the settings page hierarchy\"\\` \|\n\nUse \\`/workflow inputs <name>\\` to inspect the exact inputs in your environment.\n\nUse \\`/skill:research-codebase ...\\` when you want research on one subsystem, directory, or focused question. Use \\`/workflow deep-research-codebase ...\\` when the answer needs end-to-end tracing across many parts of the repo.\n\nIf you are drafting research, reviewer, or synthesis prompts for a workflow, use \\`/skill:prompt-engineer\\` first. It is a good fit when a stage prompt feels vague, overloaded, or underspecified.\n\n## What good workflow authoring looks like\n\nA good workflow request is explicit about stage purpose, model choice, handoff, and the decision each step must return.\n\nFor workflow-owned side effects such as filesystem writes, network mutations, and external API actions, prefer \\`ctx.tool(name, args, fn)\\`: completed calls are durably cached, so resume returns the saved result without rerunning \\`fn\\`. Keep pure computation as ordinary TypeScript, and do not wrap agent-stage internals or every function call indiscriminately.\n\nExample: ask Atomic in chat with something like this:\n\n~~~text\nCreate a reusable workflow called review-changes.\n\nIt should accept one required text input called target for a diff, PR summary, or review target.\n\nRun two independent review stages in parallel with fresh context:\n- one reviewer focused on correctness, regressions, and missing tests using openai-codex/gpt-5.5 at xhigh thinking\n- one reviewer focused on edge cases, maintainability, and hidden risks using anthropic/claude-opus-4-8 at xhigh thinking\n\nThen add an aggregate stage that consolidates both reviews, deduplicates overlap, keeps only evidence-backed issues, and separates blockers from optional suggestions using openai/gpt-5.5 at high thinking.\n\nFinally add an adjudicate stage using anthropic/claude-sonnet-4 at high thinking that decides what to fix now, what to defer, and what to reject. Return a short action list with rationale.\n\nThe workflow should return structured output with consolidated_review and decision fields.\n~~~\n\nWhy this is good:\n- it names the workflow and required input\n- it specifies which stages are parallel vs sequential\n- each stage has one job\n- it defines the handoff and final outputs\n- it calls out model choice and thinking level where that matters\n\n## Run and inspect\n\n\\`/workflow list\\`\n\n\\`/workflow inputs goal\\`\n\n\\`/workflow goal objective=\"Fix the settings form validation bug, add the focused test, and finish when invalid emails show the inline error without submitting\"\\`\n\n\\`/workflow inputs ralph\\`\n\n\\`/workflow ralph prompt=\"Migrate the database layer to Drizzle\" create_pr=true\\`\n\n\\`/workflow status\\`\n\n\\`/workflow connect <run-id>\\`\n\n\\`/workflow interrupt <run-id>\\`\n\n\\`/workflow quit <run-id>\\`\n\n\\`/workflow resume <run-id>\\`\n\nWorkflows run as background tasks. Use F2 or \\`/workflow connect <run-id>\\` for the graph viewer. Human-in-the-loop prompts appear there, not as chat modals, and awaiting-input states do not wake the main chat agent. Completion and failure notices are steered back into the main chat; answers submitted in the workflow UI interrupt stale main-chat questions so the model does not ask again.\n\n## Author your own\n\nDescribe your workflow in plain chat — say what you want the workflow to accomplish, what inputs it should accept, what stages should run, and what final output or decision it should return. Atomic will use the workflow docs to scaffold a reusable definition under \\`.atomic/workflows/\\`, ask clarifying questions when stage purpose, models, or handoffs are ambiguous, and run \\`/workflow reload\\` so you can launch it immediately.\n\n─────────────────────────────────────────────────────────────────\n\nWhere to next:\n\n\\`/atomic example\\` — see workflows in a normal task flow\n\\`/atomic overview\\` — quick refresh`;\n\nconst GUIDE_SECTIONS = [\n {\n name: \"overview\",\n aliases: [],\n label: \"overview\",\n description: \"30-second overview\",\n render: () => OVERVIEW,\n },\n {\n name: \"workflows\",\n aliases: [\"workflow\"],\n label: \"workflows\",\n description: \"Workflow primer\",\n render: () => WORKFLOWS,\n },\n {\n name: \"example\",\n aliases: [\"examples\"],\n label: \"example\",\n description: \"Practical first workflow\",\n render: () => EXAMPLE,\n },\n {\n name: \"whats-new\",\n aliases: [\"what's new\", \"whats new\", \"news\", \"updates\", \"changelog\"],\n label: \"what's new\",\n description: \"Recent release notes\",\n render: readLatestStableChangelog,\n },\n] as const satisfies readonly {\n readonly name: string;\n readonly aliases: readonly string[];\n readonly label: string;\n readonly description: string;\n readonly render: (cwd: string) => string;\n}[];\n\ntype AtomicGuideSection = (typeof GUIDE_SECTIONS)[number];\ntype AtomicGuideSectionName = AtomicGuideSection[\"name\"];\n\nexport type AtomicGuideHelpChoice = AtomicGuideSection[\"label\"];\n\nexport type AtomicGuideMode = \"help\" \| AtomicGuideSectionName;\n\nexport const ATOMIC_GUIDE_HELP_CHOICES: readonly AtomicGuideHelpChoice[] =\n GUIDE_SECTIONS.map((section) => section.label);\n\nconst GUIDE_SECTIONS_BY_NAME = new Map<\n AtomicGuideSectionName,\n AtomicGuideSection\n>(GUIDE_SECTIONS.map((section) => [section.name, section]));\nconst GUIDE_SECTIONS_BY_LABEL = new Map<string, AtomicGuideSection>(\n GUIDE_SECTIONS.map((section) => [section.label, section]),\n);\nconst GUIDE_SECTIONS_BY_INPUT = new Map<string, AtomicGuideSection>(\n GUIDE_SECTIONS.flatMap((section) =>\n [section.name, section.label, ...section.aliases].map(\n (input) => [input, section] as const,\n ),\n ),\n);\n\nexport function isAtomicGuideHelpChoice(\n choice: string,\n): choice is AtomicGuideHelpChoice {\n return GUIDE_SECTIONS_BY_LABEL.has(choice);\n}\n\nconst ATOMIC_GUIDE_TRAILING_PUNCTUATION = \"?!.,;:\";\n\nfunction stripTrailingAtomicGuidePunctuation(value: string): string {\n let end = value.length;\n while (\n end > 0 &&\n ATOMIC_GUIDE_TRAILING_PUNCTUATION.includes(value.charAt(end - 1))\n ) {\n end--;\n }\n return value.slice(0, end);\n}\n\nfunction getGuideSectionForChoice(\n choice: string,\n): AtomicGuideSection \| undefined {\n return GUIDE_SECTIONS_BY_LABEL.get(choice);\n}\n\nfunction getGuideSectionForMode(\n mode: AtomicGuideSectionName,\n): AtomicGuideSection {\n const section = GUIDE_SECTIONS_BY_NAME.get(mode);\n if (!section) throw new Error(`Unknown Atomic guide section: ${mode}`);\n return section;\n}\n\nfunction getAtomicGuideHelpMenu(): string {\n const sectionHelp = GUIDE_SECTIONS.map(\n (section) => `- \\`${section.label}\\` — run \\`/atomic ${section.label}\\``,\n ).join(\"\\n\");\n return `# Atomic\\n\\nSelect where to start:\\n\\n${sectionHelp}`;\n}\n\nexport function normalizeAtomicGuideMode(args: string): AtomicGuideMode {\n const normalized = stripTrailingAtomicGuidePunctuation(\n args.trim().toLowerCase(),\n );\n if (!normalized) return \"help\";\n\n return GUIDE_SECTIONS_BY_INPUT.get(normalized)?.name ?? \"help\";\n}\n\nexport function getAtomicGuideArgumentCompletions(\n prefix: string,\n): AutocompleteItem[] \| null {\n const query = prefix.trim().toLowerCase();\n const items = GUIDE_SECTIONS.map((section) => ({\n value: section.label,\n label: section.label,\n description: section.description,\n }));\n const filtered = query\n ? items.filter(\n (item) => item.value.startsWith(query) \|\| item.label.startsWith(query),\n )\n : items;\n return filtered.length > 0 ? filtered : null;\n}\n\nfunction readLatestStableChangelog(cwd: string): string {\n const changelogPath = getChangelogPath();\n const stableSections = parseChangelog(changelogPath)\n .filter((entry) => entry.prerelease === null)\n .slice(0, 3)\n .map((entry) => entry.content.trim())\n .filter(Boolean);\n\n if (stableSections.length === 0) {\n return `# What's new\\n\\nNo stable release sections were found. Try \\`/changelog\\` for the interactive changelog viewer.\\n\\n─────────────────────────────────────────────────────────────────\\n\\nWhere to next:\\n\\n\\`/atomic example\\` — see a practical first workflow\\n\\`/atomic overview\\` — quick refresh`;\n }\n\n const relativePath = path.relative(cwd, changelogPath) \|\| changelogPath;\n return `# What's new\\n\\n${stableSections.join(\"\\n\\n\")}\\n\\nSource: \\`${relativePath}\\`\\n\\n─────────────────────────────────────────────────────────────────\\n\\nWhere to next:\\n\\n\\`/atomic example\\` — see a practical first workflow\\n\\`/atomic overview\\` — quick refresh`;\n}\n\nexport function getAtomicGuideMessage(\n mode: AtomicGuideMode,\n cwd: string,\n): string {\n if (mode === \"help\") return getAtomicGuideHelpMenu();\n return getGuideSectionForMode(mode).render(cwd);\n}\n\nexport function atomicGuideModeForChoice(\n choice: AtomicGuideHelpChoice,\n): AtomicGuideMode {\n return getGuideSectionForChoice(choice)?.name ?? \"help\";\n}\n"]}
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Default to a workflow for implementation, build, debugging, bug fixes, migrations, features, scoped multi-file changes, and validated docs/code work, or whenever a request has dependencies, handoffs, uncertainty, review gates, measurable done criteria, or evidence requirements. Use direct chat for tiny deterministic low-risk answers or edits. Loop-shaped prompts such as \\`do X until Y\\`, \\`review/fix until passing\\`, or \\`run checks and fix until green\\` are especially strong workflow signals. Workflow-first is not builtin-only or monolithic: use named workflows, direct modes, author a custom TypeScript \\`workflow({...})\\` inline, or import reusable project/package and builtin definitions from \\`@bastani/workflows/builtin\\` and nest them with \\`ctx.workflow(...)\\`. Nested children may compose further children within \\`maxDepth\\`, enabling powerful research → implementation → verification → approval graphs from reusable parts. Start Atomic in a project with \\`atomic\\`, then talk to it normally. Use \\`@file\\` to attach files, \\`!command\\` to run shell output through the model, and \\`!!command\\` to run shell output without adding it to context.\n\n## Core session commands\n\n\| Command \| Use \|\n\|---\|---\|\n\| \\`/login\\` \| configure auth \|\n\| \\`/model\\` \| switch model \|\n\| \\`/settings\\` \| thinking level, theme, message delivery, transport \|\n\| \\`/new\\`, \\`/resume\\` \| start or resume sessions \|\n\| \\`/tree\\`, \\`/fork\\`, \\`/clone\\` \| branch or navigate session history \|\n\| \\`/compact\\` \| delete safe older context verbatim \|\n\| \\`/hotkeys\\`, \\`/changelog\\` \| local help and release notes \|\n\n## Examples of using Atomic\n\n\| Goal \| How to use \|\n\|---\|---\|\n\| On-call / broken behavior \| Use a focused workflow to reproduce, diagnose, repair, and validate; direct debugger/subagent calls remain useful as stages or for tiny deterministic diagnosis \|\n\| Research → spec → implementation \| Chain \\`/skill:research-codebase\\` → \\`/skill:create-spec\\` → a named or custom implementation workflow with explicit validation and review \|\n\| Testing / regression hardening \| Use a workflow for test/fix loops so retries, evidence, and the passing stop condition are tracked \|\n\| Large repo discovery \| Run \\`/parallel codebase-locator \"map the area\" -> codebase-analyzer \"trace the current flow\" -> codebase-pattern-finder \"find patterns\" --bg\\`, or use repository-focused \\`fan-out-and-synthesize\\` branches plus a synthesis barrier \|\n\| UI / product polish \| Run \\`/skill:impeccable\\` for interface critique and refinement, or \\`/workflow open-claude-design\\` for generation + refinement loops \|\n\n## Built-in workflows\n\n\| Workflow \| When to use \| How to run \|\n\|---\|---\|---\|\n\| \\`classify-and-act\\` \| structured routing with a low-confidence human fallback \| \\`/workflow classify-and-act prompt=\"Triage this request\"\\` \|\n\| \\`fan-out-and-synthesize\\` \| independent slices or repository-focused research with artifact synthesis \| \\`/workflow fan-out-and-synthesize prompt=\"Map payment retries by subsystem\"\\` \|\n\| \\`adversarial-verification\\` \| fresh verification and bounded repair of a candidate \| \\`/workflow adversarial-verification task=\"Verify the migration patch\"\\` \|\n\| \\`generate-and-filter\\` \| generate many candidates and keep a distinct shortlist \| \\`/workflow generate-and-filter prompt=\"Propose command names\"\\` \|\n\| \\`tournament\\` \| compare whole solutions through balanced pairwise judging \| \\`/workflow tournament prompt=\"Design the retry strategy\"\\` \|\n\| \\`loop-until-done\\` \| iterate until explicit evidence passes or the bound is exhausted \| \\`/workflow loop-until-done prompt=\"Repair failures until tests pass\"\\` \|\n\| \\`goal\\` \| ledger-backed autonomous work with receipts and reviewer-gated completion \| \\`/workflow goal objective=\"Update CLI docs and validate the docs build\"\\` \|\n\| \\`ralph\\` \| research-first delegated implementation with bounded multi-model review \| \\`/workflow ralph prompt=\"Implement specs/rate-limit.md\"\\` \|\n\| \\`open-claude-design\\` \| UI and design-system generation and refinement \| \\`/workflow open-claude-design prompt=\"Refresh the settings page hierarchy\"\\` \|\n\nUse \\`/workflow list\\` to see what is available and \\`/workflow inputs <name>\\` to inspect inputs in your environment.\n\n## Top skills\n\n\| Skill \| When to use \| How to run \|\n\|---\|---\|---\|\n\| \\`research-codebase\\` \| write a grounded research artifact for one subsystem or question \| \\`/skill:research-codebase how the rate limiter works in src/middleware/\\` \|\n\| \\`create-spec\\` \| turn research into an implementation-ready plan \| \\`/skill:create-spec from research/docs/<date>-<topic>.md\\` \|\n\| \\`tdd\\` \| do test-first feature or bug work \| \\`/skill:tdd\\` \|\n\| \\`prompt-engineer\\` \| tighten a vague prompt before a long run \| \\`/skill:prompt-engineer Draft a sharper implementation prompt for ...\\` \|\n\| \\`subagent\\` \| learn delegation patterns and exact \\`/run\\`, \\`/parallel\\`, and \\`/chain\\` usage \| \\`/skill:subagent\\` \|\n\| \\`impeccable\\` \| critique or refine frontend and product UI \| \\`/skill:impeccable\\` \|\n\n## Subagents\n\nSubagents are focused child Atomic sessions you can point at one job inside the repo.\n\n\| Built-in subagent \| Use \|\n\|---\|---\|\n\| \\`codebase-locator\\` \| find relevant files, tests, entrypoints, and configs \|\n\| \\`codebase-analyzer\\` \| explain current behavior with file:line refs \|\n\| \\`codebase-pattern-finder\\` \| find existing code to model after \|\n\| \\`debugger\\` \| reproduce, diagnose, and fix broken behavior \|\n\nHow the direct commands map to repo work:\n- \\`/run\\` = one specialist on one job, for example \\`/run codebase-locator \"Map the webhook retry flow\"\\`\n- \\`/parallel\\` = several independent specialists at once, for example \\`/parallel codebase-locator \"map retry files\" -> codebase-pattern-finder \"find existing retry/backoff patterns\" -> codebase-online-researcher \"research current retry guidance\" --bg\\`\n- \\`/chain\\` = ordered handoffs, for example \\`/chain codebase-locator \"find the auth files\" -> codebase-analyzer \"trace the auth flow\" -> debugger \"patch the failing auth edge case\"\\`\n\n─────────────────────────────────────────────────────────────────\n\nWhere to next:\n\n\\`/atomic example\\` — see the pieces used on a code task\n\\`/atomic workflows\\` — learn when to use workflows`;\n\nconst EXAMPLE = `# Practical example\n\nThis example shows a spec-driven development process whose clearly delegated autonomous implementation benefits from durable workflow execution. For interactive or conversation-led work, stay inline or use bounded subagents while the parent remains in control. Type the examples below into the Atomic TUI chat after starting \\`atomic\\` in your project.\n\n## 1. Research what exists\n\nUse \\`/skill:research-codebase\\` for a scoped area, subsystem, or directory:\n\n\\`/skill:research-codebase how the rate limiter works in src/middleware/\\`\n\nFor repository-wide research, use \\`fan-out-and-synthesize\\` with distinct subsystem partitions, artifact outputs, and a synthesis prompt that cites concrete paths:\n\n\\`/workflow fan-out-and-synthesize prompt=\"Partition payment retries by subsystem and synthesize cited end-to-end findings\"\\`\n\nIf the research prompt is vague, tighten it first with \\`/skill:prompt-engineer\\`:\n\n\\`/skill:prompt-engineer Draft a sharper repo-research prompt for understanding payment retries end to end, including retries, queues, and failure handling.\\`\n\n## 2. Create a spec when requirements are fuzzy\n\nSkip this if the implementation request is already precise.\n\n\\`/skill:create-spec from research/docs/<date>-<topic>.md\\`\n\n## 3. Implement with review built in\n\nDefault to a workflow for non-trivial implementation and review. Use direct chat only for tiny deterministic low-risk edits; use focused subagents inside workflow stages or for bounded specialist passes. Choose an installed workflow when it fits, or author a custom TypeScript workflow inline from the starter patterns when the task needs a richer graph.\n\nFor implementation with review built in, author a task-specific worker → fresh verifier → reducer loop. Give it literal acceptance criteria, deterministic checks, evidence-backed repair payloads, and a bounded stop condition:\n\n\\`Create and run a workflow that implements specs/<date>-<topic>.md, runs focused tests, sends the patch to fresh verifiers, and repairs findings until the documented behavior passes or the iteration bound is reached.\\`\n\nLoop or stop-condition phrasing is a key workflow signal. Encode \\`do X until Y\\`, \\`review/fix until passing\\`, or \\`run checks and fix until green\\` as explicit bounded workflow gates rather than informal retries.\n\n## 4. Decide and land\n\nUse the workflow's deterministic evidence, verifier decision, remaining-work report, and bound-exhaustion state to decide whether to ship, repair, unblock, or clarify. Keep PR/MR creation, deployment, and publication as separately authorized post-approval actions.\n\nIf you implemented directly instead of using a workflow, you can still run:\n\n\\`/parallel-review current diff\\`\n\nAtomic will synthesize reviewer feedback and ask before applying fixes.\n\n─────────────────────────────────────────────────────────────────\n\nWhere to next:\n\n\\`/atomic workflows\\` — learn when to use workflows\n\\`/atomic overview\\` — quick refresh`;\n\nconst WORKFLOWS = `# Workflows primer\n\nA workflow is a TypeScript-defined pipeline exported from \\`workflow({...})\\`. It can run tasks, chains, parallel fan-out, human-in-the-loop prompts, background status, and model fallback chains.\n\nDefault to workflows for non-trivial work and requests with inherent structure plus a verifiable objective. Implementation, debugging, migrations, multi-file changes, validation, review, evidence requirements, and explicit stop conditions are workflow-shaped; use direct chat only for tiny deterministic low-risk answers or edits.\n\nWorkflow-first is not builtin-only or monolithic. Atomic can author custom TypeScript \\`workflow({...})\\` definitions inline, and workflows can import reusable project/package definitions or builtins from \\`@bastani/workflows/builtin\\`, then nest them with \\`ctx.workflow(...)\\`. Imported children can nest further children within \\`maxDepth\\`, so compose proven research, implementation, design, verification, and approval workflows instead of copying their stages. Use the documented starter patterns for classify-and-act routing, dynamic fan-out and synthesis, adversarial verification, candidate selection, and bounded convergence. Atomic writes the parent definition, reloads it, and runs the composed graph.\n\n## Built-in workflows\n\n\| Workflow \| When to use \| How to run \|\n\|---\|---\|---\|\n\| \\`classify-and-act\\` \| structured routing \| \\`/workflow classify-and-act prompt=\"Triage this request\"\\` \|\n\| \\`fan-out-and-synthesize\\` \| independent slices or repository research \| \\`/workflow fan-out-and-synthesize prompt=\"Map payment retries by subsystem\"\\` \|\n\| \\`adversarial-verification\\` \| fresh verification and bounded repair \| \\`/workflow adversarial-verification task=\"Verify the patch\"\\` \|\n\| \\`generate-and-filter\\` \| candidate generation and shortlisting \| \\`/workflow generate-and-filter prompt=\"Propose command names\"\\` \|\n\| \\`tournament\\` \| balanced whole-solution comparison \| \\`/workflow tournament prompt=\"Design the retry strategy\"\\` \|\n\| \\`loop-until-done\\` \| bounded convergence on explicit evidence \| \\`/workflow loop-until-done prompt=\"Repair failures until tests pass\"\\` \|\n\| \\`goal\\` \| durable ledger, bounded orchestration, and reviewer-gated completion \| \\`/workflow goal objective=\"Update CLI docs and validate the docs build\"\\` \|\n\| \\`ralph\\` \| research-first delegated implementation and iterative review \| \\`/workflow ralph prompt=\"Implement specs/rate-limit.md\"\\` \|\n\| \\`open-claude-design\\` \| frontend and product design \| \\`/workflow open-claude-design prompt=\"Refresh the settings page hierarchy\"\\` \|\n\nUse \\`/workflow inputs <name>\\` to inspect exact inputs. Goal and Ralph skip PR creation unless \\`create_pr=true\\` explicitly authorizes their post-approval final stage. Use \\`/skill:research-codebase\\` for one focused subsystem and repository-focused \\`fan-out-and-synthesize\\` for independent whole-repository slices.\n\nIf you are drafting research, reviewer, or synthesis prompts for a workflow, use \\`/skill:prompt-engineer\\` first. It is a good fit when a stage prompt feels vague, overloaded, or underspecified.\n\n## What good workflow authoring looks like\n\nA good workflow request is explicit about stage purpose, model choice, handoff, and the decision each step must return.\n\nFor workflow-owned side effects such as filesystem writes, network mutations, and external API actions, prefer \\`ctx.tool(name, args, fn)\\`: completed calls are durably cached, so resume returns the saved result without rerunning \\`fn\\`. Keep pure computation as ordinary TypeScript, and do not wrap agent-stage internals or every function call indiscriminately.\n\nExample: ask Atomic in chat with something like this:\n\n~~~text\nCreate a reusable workflow called review-changes.\n\nIt should accept one required text input called target for a diff, PR summary, or review target.\n\nRun two independent review stages in parallel with fresh context:\n- one reviewer focused on correctness, regressions, and missing tests using openai-codex/gpt-5.5 at xhigh thinking\n- one reviewer focused on edge cases, maintainability, and hidden risks using anthropic/claude-opus-4-8 at xhigh thinking\n\nThen add an aggregate stage that consolidates both reviews, deduplicates overlap, keeps only evidence-backed issues, and separates blockers from optional suggestions using openai/gpt-5.5 at high thinking.\n\nFinally add an adjudicate stage using anthropic/claude-sonnet-4 at high thinking that decides what to fix now, what to defer, and what to reject. Return a short action list with rationale.\n\nThe workflow should return structured output with consolidated_review and decision fields.\n~~~\n\nWhy this is good:\n- it names the workflow and required input\n- it specifies which stages are parallel vs sequential\n- each stage has one job\n- it defines the handoff and final outputs\n- it calls out model choice and thinking level where that matters\n\n## Run and inspect\n\n\\`/workflow list\\`\n\n\\`/workflow inputs fan-out-and-synthesize\\`\n\n\\`/workflow fan-out-and-synthesize prompt=\"Partition the settings flow by subsystem and synthesize cited findings\"\\`\n\n\\`/workflow inputs adversarial-verification\\`\n\n\\`/workflow adversarial-verification task=\"Verify the settings form validation patch\"\\`\n\n\\`/workflow status\\`\n\n\\`/workflow connect <run-id>\\`\n\n\\`/workflow interrupt <run-id>\\`\n\n\\`/workflow quit <run-id>\\`\n\n\\`/workflow resume <run-id>\\`\n\nWorkflows run as background tasks. Use F2 or \\`/workflow connect <run-id>\\` for the graph viewer. Human-in-the-loop prompts appear there, not as chat modals, and awaiting-input states do not wake the main chat agent. Completion and failure notices are steered back into the main chat; answers submitted in the workflow UI interrupt stale main-chat questions so the model does not ask again.\n\n## Author your own\n\nDescribe your workflow in plain chat — say what you want the workflow to accomplish, what inputs it should accept, what stages should run, and what final output or decision it should return. Atomic will use the workflow docs to scaffold a reusable definition under \\`.atomic/workflows/\\`, ask clarifying questions when stage purpose, models, or handoffs are ambiguous, and run \\`/workflow reload\\` so you can launch it immediately.\n\n─────────────────────────────────────────────────────────────────\n\nWhere to next:\n\n\\`/atomic example\\` — see workflows in a normal task flow\n\\`/atomic overview\\` — quick refresh`;\n\nconst GUIDE_SECTIONS = [\n {\n name: \"overview\",\n aliases: [],\n label: \"overview\",\n description: \"30-second overview\",\n render: () => OVERVIEW,\n },\n {\n name: \"workflows\",\n aliases: [\"workflow\"],\n label: \"workflows\",\n description: \"Workflow primer\",\n render: () => WORKFLOWS,\n },\n {\n name: \"example\",\n aliases: [\"examples\"],\n label: \"example\",\n description: \"Practical first workflow\",\n render: () => EXAMPLE,\n },\n {\n name: \"whats-new\",\n aliases: [\"what's new\", \"whats new\", \"news\", \"updates\", \"changelog\"],\n label: \"what's new\",\n description: \"Recent release notes\",\n render: readLatestStableChangelog,\n },\n] as const satisfies readonly {\n readonly name: string;\n readonly aliases: readonly string[];\n readonly label: string;\n readonly description: string;\n readonly render: (cwd: string) => string;\n}[];\n\ntype AtomicGuideSection = (typeof GUIDE_SECTIONS)[number];\ntype AtomicGuideSectionName = AtomicGuideSection[\"name\"];\n\nexport type AtomicGuideHelpChoice = AtomicGuideSection[\"label\"];\n\nexport type AtomicGuideMode = \"help\" \| AtomicGuideSectionName;\n\nexport const ATOMIC_GUIDE_HELP_CHOICES: readonly AtomicGuideHelpChoice[] =\n GUIDE_SECTIONS.map((section) => section.label);\n\nconst GUIDE_SECTIONS_BY_NAME = new Map<\n AtomicGuideSectionName,\n AtomicGuideSection\n>(GUIDE_SECTIONS.map((section) => [section.name, section]));\nconst GUIDE_SECTIONS_BY_LABEL = new Map<string, AtomicGuideSection>(\n GUIDE_SECTIONS.map((section) => [section.label, section]),\n);\nconst GUIDE_SECTIONS_BY_INPUT = new Map<string, AtomicGuideSection>(\n GUIDE_SECTIONS.flatMap((section) =>\n [section.name, section.label, ...section.aliases].map(\n (input) => [input, section] as const,\n ),\n ),\n);\n\nexport function isAtomicGuideHelpChoice(\n choice: string,\n): choice is AtomicGuideHelpChoice {\n return GUIDE_SECTIONS_BY_LABEL.has(choice);\n}\n\nconst ATOMIC_GUIDE_TRAILING_PUNCTUATION = \"?!.,;:\";\n\nfunction stripTrailingAtomicGuidePunctuation(value: string): string {\n let end = value.length;\n while (\n end > 0 &&\n ATOMIC_GUIDE_TRAILING_PUNCTUATION.includes(value.charAt(end - 1))\n ) {\n end--;\n }\n return value.slice(0, end);\n}\n\nfunction getGuideSectionForChoice(\n choice: string,\n): AtomicGuideSection \| undefined {\n return GUIDE_SECTIONS_BY_LABEL.get(choice);\n}\n\nfunction getGuideSectionForMode(\n mode: AtomicGuideSectionName,\n): AtomicGuideSection {\n const section = GUIDE_SECTIONS_BY_NAME.get(mode);\n if (!section) throw new Error(`Unknown Atomic guide section: ${mode}`);\n return section;\n}\n\nfunction getAtomicGuideHelpMenu(): string {\n const sectionHelp = GUIDE_SECTIONS.map(\n (section) => `- \\`${section.label}\\` — run \\`/atomic ${section.label}\\``,\n ).join(\"\\n\");\n return `# Atomic\\n\\nSelect where to start:\\n\\n${sectionHelp}`;\n}\n\nexport function normalizeAtomicGuideMode(args: string): AtomicGuideMode {\n const normalized = stripTrailingAtomicGuidePunctuation(\n args.trim().toLowerCase(),\n );\n if (!normalized) return \"help\";\n\n return GUIDE_SECTIONS_BY_INPUT.get(normalized)?.name ?? \"help\";\n}\n\nexport function getAtomicGuideArgumentCompletions(\n prefix: string,\n): AutocompleteItem[] \| null {\n const query = prefix.trim().toLowerCase();\n const items = GUIDE_SECTIONS.map((section) => ({\n value: section.label,\n label: section.label,\n description: section.description,\n }));\n const filtered = query\n ? items.filter(\n (item) => item.value.startsWith(query) \|\| item.label.startsWith(query),\n )\n : items;\n return filtered.length > 0 ? filtered : null;\n}\n\nfunction readLatestStableChangelog(cwd: string): string {\n const changelogPath = getChangelogPath();\n const stableSections = parseChangelog(changelogPath)\n .filter((entry) => entry.prerelease === null)\n .slice(0, 3)\n .map((entry) => entry.content.trim())\n .filter(Boolean);\n\n if (stableSections.length === 0) {\n return `# What's new\\n\\nNo stable release sections were found. Try \\`/changelog\\` for the interactive changelog viewer.\\n\\n─────────────────────────────────────────────────────────────────\\n\\nWhere to next:\\n\\n\\`/atomic example\\` — see a practical first workflow\\n\\`/atomic overview\\` — quick refresh`;\n }\n\n const relativePath = path.relative(cwd, changelogPath) \|\| changelogPath;\n return `# What's new\\n\\n${stableSections.join(\"\\n\\n\")}\\n\\nSource: \\`${relativePath}\\`\\n\\n─────────────────────────────────────────────────────────────────\\n\\nWhere to next:\\n\\n\\`/atomic example\\` — see a practical first workflow\\n\\`/atomic overview\\` — quick refresh`;\n}\n\nexport function getAtomicGuideMessage(\n mode: AtomicGuideMode,\n cwd: string,\n): string {\n if (mode === \"help\") return getAtomicGuideHelpMenu();\n return getGuideSectionForMode(mode).render(cwd);\n}\n\nexport function atomicGuideModeForChoice(\n choice: AtomicGuideHelpChoice,\n): AtomicGuideMode {\n return getGuideSectionForChoice(choice)?.name ?? \"help\";\n}\n"]}

package/dist/core/auth-storage.js CHANGED Viewed

@@ -194,7 +194,7 @@ export class AuthStorage {
             return true;
         if (this.data[provider])
             return true;
-        if (getEnvApiKey(provider))
+        if (findEnvKeys(provider)?.[0])
             return true;
         if (this.fallbackResolver?.(provider))
             return true;
@@ -212,7 +212,7 @@ export class AuthStorage {
         }
         const envKeys = findEnvKeys(provider);
         if (envKeys?.[0]) {
-            return { configured: false, source: "environment", label: envKeys[0] };
+            return { configured: true, source: "environment", label: envKeys[0] };
         }
         if (this.fallbackResolver?.(provider)) {
             return { configured: false, source: "fallback", label: "custom provider config" };

package/dist/core/auth-storage.js.map CHANGED Viewed

	@@ -1 +1 @@
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Credential storage for API keys and OAuth tokens.\n * Handles loading, saving, and refreshing credentials from auth.json.\n \n Uses file locking to prevent race conditions when multiple pi instances\n * try to refresh tokens simultaneously.\n /\n\nimport {\n\ttype Credential,\n\ttype CredentialInfo,\n\ttype CredentialStore,\n\ttype ModelAuth,\n\ttype OAuthCredential as PiOAuthCredential,\n\ttype OAuthCredentials,\n} from \"@earendil-works/pi-ai\";\nimport { findEnvKeys, getEnvApiKey } from \"@earendil-works/pi-ai/compat\";\nimport { join } from \"path\";\nimport { getAgentConfigPaths, getAgentDir } from \"../config.ts\";\nimport { FileAuthStorageBackend, InMemoryAuthStorageBackend, type AuthStorageBackend } from \"./auth-storage-backends.ts\";\nimport {\n\ttype AtomicOAuthLoginCallbacks,\n\tgetOAuthProviderDescriptors,\n\tloginOAuthProvider,\n\toauthCredentialToAuth,\n\trefreshOAuthProvider,\n} from \"./oauth-provider-bridge.ts\";\nimport { resolveConfigValue } from \"./resolve-config-value.ts\";\n\nexport type ApiKeyCredential = {\n\ttype: \"api_key\";\n\tkey?: string;\n\t/* Provider-scoped configuration persisted alongside the credential. /\n\tenv?: Record<string, string>;\n};\n\nexport type OAuthCredential = {\n\ttype: \"oauth\";\n} & OAuthCredentials;\n\nexport type AuthCredential = ApiKeyCredential \| OAuthCredential;\n\nexport type AuthStorageData = Record<string, AuthCredential>;\n\nexport type AuthStatus = {\n\tconfigured: boolean;\n\tsource?: \"stored\" \| \"runtime\" \| \"environment\" \| \"fallback\" \| \"models_json_key\" \| \"models_json_command\";\n\tlabel?: string;\n};\n\nexport { FileAuthStorageBackend, InMemoryAuthStorageBackend, type AuthStorageBackend } from \"./auth-storage-backends.ts\";\n\n/* Read one persisted provider credential using Atomic's layered config paths. /\nexport function readStoredCredential(providerId: string, authPath?: string \| string[]): Credential \| undefined {\n\treturn AuthStorage.create(authPath).get(providerId) as Credential \| undefined;\n}\n\n/\n Credential storage backed by a JSON file.\n /\nexport class AuthStorage {\n\tprivate data: AuthStorageData = {};\n\tprivate runtimeOverrides: Map<string, string> = new Map();\n\tprivate fallbackResolver?: (provider: string) => string \| undefined;\n\tprivate loadError: Error \| null = null;\n\tprivate errors: Error[] = [];\n\tprivate credentialMutationTail: Promise<void> = Promise.resolve();\n\tprivate credentialVersions = new Map<string, number>();\n\n\tdeclare private storage: AuthStorageBackend;\n\n\tprivate constructor(storage: AuthStorageBackend) {\n\t\tthis.storage = storage;\n\t\tthis.reload();\n\t}\n\n\tstatic create(authPath?: string \| string[]): AuthStorage {\n\t\tconst paths = authPath === undefined\n\t\t\t? getAgentConfigPaths(\"auth.json\")\n\t\t\t: Array.isArray(authPath) ? authPath : [authPath];\n\t\treturn new AuthStorage(new FileAuthStorageBackend(paths[0] ?? join(getAgentDir(), \"auth.json\"), paths));\n\t}\n\n\tstatic fromStorage(storage: AuthStorageBackend): AuthStorage {\n\t\treturn new AuthStorage(storage);\n\t}\n\n\tstatic inMemory(data: AuthStorageData = {}): AuthStorage {\n\t\tconst storage = new InMemoryAuthStorageBackend();\n\t\tstorage.withLock(() => ({ result: undefined, next: JSON.stringify(data, null, 2) }));\n\t\treturn AuthStorage.fromStorage(storage);\n\t}\n\n\t/\n\t Set a runtime API key override (not persisted to disk).\n\t * Used for CLI --api-key flag.\n\t /\n\tsetRuntimeApiKey(provider: string, apiKey: string): void {\n\t\tthis.runtimeOverrides.set(provider, apiKey);\n\t}\n\t/* Read a non-persisted request override without resolving stored credentials. /\n\tgetRuntimeApiKey(provider: string): string \| undefined {\n\t\treturn this.runtimeOverrides.get(provider);\n\t}\n\n\n\t/\n\t Remove a runtime API key override.\n\t /\n\tremoveRuntimeApiKey(provider: string): void {\n\t\tthis.runtimeOverrides.delete(provider);\n\t}\n\n\t/\n\t Set a fallback resolver for API keys not found in auth.json or env vars.\n\t * Used for custom provider keys from models.json.\n\t /\n\tsetFallbackResolver(resolver: (provider: string) => string \| undefined): void {\n\t\tthis.fallbackResolver = resolver;\n\t}\n\n\tprivate recordError(error: unknown): void {\n\t\tconst normalizedError = error instanceof Error ? error : new Error(String(error));\n\t\tthis.errors.push(normalizedError);\n\t}\n\n\tprivate parseStorageData(content: string \| undefined): AuthStorageData {\n\t\tif (!content) {\n\t\t\treturn {};\n\t\t}\n\t\treturn JSON.parse(content) as AuthStorageData;\n\t}\n\n\t/\n\t Reload credentials from storage.\n\t /\n\treload(): void {\n\t\ttry {\n\t\t\t// Pure read: never take the exclusive write lock. Writers replace\n\t\t\t// auth.json atomically, so a lock-free read always sees a complete\n\t\t\t// snapshot. This keeps many concurrent sessions from starving each other\n\t\t\t// on the lock and misreporting configured providers as unreadable under\n\t\t\t// contention (issue #1431).\n\t\t\tconst content = this.readSnapshot();\n\t\t\tthis.data = this.parseStorageData(content);\n\t\t\tthis.loadError = null;\n\t\t} catch (error) {\n\t\t\tthis.loadError = error as Error;\n\t\t\tthis.recordError(error);\n\t\t}\n\t}\n\n\t/\n\t Read the credential snapshot, preferring the backend's lock-free `read()`.\n\t * Falls back to a `withLock`-based read for custom backends that predate\n\t * `read()` so the released `AuthStorageBackend` interface stays compatible.\n\t /\n\tprivate readSnapshot(): string \| undefined {\n\t\tif (this.storage.read) {\n\t\t\treturn this.storage.read();\n\t\t}\n\t\tlet content: string \| undefined;\n\t\tthis.storage.withLock((current) => {\n\t\t\tcontent = current;\n\t\t\treturn { result: undefined };\n\t\t});\n\t\treturn content;\n\t}\n\n\tprivate bumpCredentialVersion(provider: string): void {\n\t\tthis.credentialVersions.set(provider, (this.credentialVersions.get(provider) ?? 0) + 1);\n\t}\n\n\tprivate persistProviderChange(provider: string, credential: AuthCredential \| undefined): void {\n\t\tif (this.loadError) {\n\t\t\tthis.reload();\n\t\t\tif (this.loadError) throw this.loadError;\n\t\t}\n\n\t\ttry {\n\t\t\tconst persistedData = this.storage.withLock((current) => {\n\t\t\t\tconst currentData = this.parseStorageData(current);\n\t\t\t\tconst merged: AuthStorageData = { ...currentData };\n\t\t\t\tif (credential) {\n\t\t\t\t\tmerged[provider] = credential;\n\t\t\t\t} else {\n\t\t\t\t\tdelete merged[provider];\n\t\t\t\t}\n\t\t\t\treturn { result: merged, next: JSON.stringify(merged, null, 2) };\n\t\t\t});\n\t\t\tthis.data = persistedData;\n\t\t\tthis.bumpCredentialVersion(provider);\n\t\t\tthis.loadError = null;\n\t\t} catch (error) {\n\t\t\tthis.recordError(error);\n\t\t\tthrow error instanceof Error ? error : new Error(String(error));\n\t\t}\n\t}\n\n\t/\n\t Get credential for a provider.\n\t /\n\tget(provider: string): AuthCredential \| undefined {\n\t\treturn this.data[provider] ?? undefined;\n\t}\n\n\t/\n\t Set credential for a provider.\n\t /\n\tset(provider: string, credential: AuthCredential): void {\n\t\tthis.persistProviderChange(provider, credential);\n\t}\n\n\t/\n\t Remove credential for a provider.\n\t /\n\tremove(provider: string): void {\n\t\tif (!this.storage.deleteProvider) {\n\t\t\tthis.persistProviderChange(provider, undefined);\n\t\t\treturn;\n\t\t}\n\t\ttry {\n\t\t\tthis.data = this.parseStorageData(this.storage.deleteProvider(provider));\n\t\t\tthis.bumpCredentialVersion(provider);\n\t\t\tthis.loadError = null;\n\t\t} catch (error) {\n\t\t\tthis.recordError(error);\n\t\t\tthrow error instanceof Error ? error : new Error(String(error));\n\t\t}\n\t}\n\n\t/\n\t List all providers with credentials.\n\t /\n\tlist(): string[] {\n\t\treturn Object.keys(this.data);\n\t}\n\n\t/\n\t Check if credentials exist for a provider in auth.json.\n\t /\n\thas(provider: string): boolean {\n\t\treturn provider in this.data;\n\t}\n\n\t/\n\t Check if any form of auth is configured for a provider.\n\t * Unlike getApiKey(), this doesn't refresh OAuth tokens.\n\t /\n\thasAuth(provider: string): boolean {\n\t\tif (this.runtimeOverrides.has(provider)) return true;\n\t\tif (this.data[provider]) return true;\n\t\tif (getEnvApiKey(provider)) return true;\n\t\tif (this.fallbackResolver?.(provider)) return true;\n\t\treturn false;\n\t}\n\n\t/\n\t Return auth status without exposing credential values or refreshing tokens.\n\t /\n\tgetAuthStatus(provider: string): AuthStatus {\n\t\tif (this.data[provider]) {\n\t\t\treturn { configured: true, source: \"stored\" };\n\t\t}\n\n\t\tif (this.runtimeOverrides.has(provider)) {\n\t\t\treturn { configured: false, source: \"runtime\", label: \"--api-key\" };\n\t\t}\n\n\t\tconst envKeys = findEnvKeys(provider);\n\t\tif (envKeys?.[0]) {\n\t\t\treturn { configured: false, source: \"environment\", label: envKeys[0] };\n\t\t}\n\n\t\tif (this.fallbackResolver?.(provider)) {\n\t\t\treturn { configured: false, source: \"fallback\", label: \"custom provider config\" };\n\t\t}\n\n\t\treturn { configured: false };\n\t}\n\n\t/* Return a copy of all persisted credentials. /\n\tgetAll(): AuthStorageData {\n\t\treturn { ...this.data };\n\t}\n\n\tdrainErrors(): Error[] {\n\t\tconst drained = [...this.errors];\n\t\tthis.errors = [];\n\t\treturn drained;\n\t}\n\n\t/\n\t Returns the error from the most recent failed credential load, or null when\n\t * the last reload succeeded.\n\t \n\t A non-null value means stored credentials could NOT be read — e.g. the auth\n\t * file was temporarily locked by another process (ELOCKED) or contained\n\t * invalid JSON — so an empty/absent credential set is NOT authoritative.\n\t * Callers that would otherwise report \"No API key found\" should surface this\n\t * load failure instead of treating the provider as unauthenticated\n\t * (issue #1431).\n\t /\n\tgetLoadError(): Error \| null {\n\t\treturn this.loadError;\n\t}\n\n\t/\n\t Login to an OAuth provider.\n\t /\n\tasync login(providerId: string, callbacks: AtomicOAuthLoginCallbacks): Promise<void> {\n\t\tconst credential = await loginOAuthProvider(providerId, callbacks);\n\t\tawait this.asCredentialStore().modify(providerId, async () => credential);\n\t}\n\n\t/* Logout through the preserved synchronous persistence path. /\n\tlogout(provider: string): void {\n\t\tthis.remove(provider);\n\t}\n\n\t/* Serialized logout for callers that need persistence completion. /\n\tasync logoutAsync(provider: string): Promise<void> {\n\t\tawait this.asCredentialStore().delete(provider);\n\t}\n\n\t/\n\t Refresh OAuth token with backend locking to prevent race conditions.\n\t * Multiple pi instances may try to refresh simultaneously when tokens expire.\n\t /\n\tprivate async refreshOAuthTokenWithLock(\n\t\tproviderId: string,\n\t): Promise<{ auth: ModelAuth; newCredentials: OAuthCredentials } \| null> {\n\t\treturn this.runCredentialMutation(async () => {\n\t\t\tlet synchronizedData: AuthStorageData \| undefined;\n\t\t\tconst credentialVersion = this.credentialVersions.get(providerId) ?? 0;\n\t\t\tconst result = await this.storage.withLockAsync(async (current) => {\n\t\t\t\tconst currentData = this.parseStorageData(current);\n\t\t\t\tsynchronizedData = currentData;\n\t\t\t\tconst cred = currentData[providerId];\n\t\t\t\tif (cred?.type !== \"oauth\") return { result: null };\n\n\t\t\t\tconst oauthCredential: PiOAuthCredential = { ...cred, type: \"oauth\" };\n\t\t\t\tif (Date.now() < cred.expires) {\n\t\t\t\t\tconst auth = await oauthCredentialToAuth(providerId, oauthCredential);\n\t\t\t\t\treturn { result: auth ? { auth, newCredentials: cred } : null };\n\t\t\t\t}\n\n\t\t\t\tconst refreshed = await refreshOAuthProvider(providerId, oauthCredential);\n\t\t\t\tif (!refreshed) return { result: null };\n\t\t\t\tif ((this.credentialVersions.get(providerId) ?? 0) !== credentialVersion) {\n\t\t\t\t\tsynchronizedData = undefined;\n\t\t\t\t\treturn { result: null };\n\t\t\t\t}\n\t\t\t\tconst merged: AuthStorageData = {\n\t\t\t\t\t...currentData,\n\t\t\t\t\t[providerId]: refreshed.credential,\n\t\t\t\t};\n\t\t\t\tsynchronizedData = merged;\n\t\t\t\treturn {\n\t\t\t\t\tresult: { auth: refreshed.auth, newCredentials: refreshed.credential },\n\t\t\t\t\tnext: JSON.stringify(merged, null, 2),\n\t\t\t\t};\n\t\t\t});\n\n\t\t\tif (synchronizedData) this.data = synchronizedData;\n\t\t\tthis.loadError = null;\n\t\t\treturn result;\n\t\t});\n\t}\n\n\t/\n\t Get API key for a provider.\n\t * Priority:\n\t * 1. Runtime override (CLI --api-key)\n\t * 2. API key from auth.json\n\t * 3. OAuth token from auth.json (auto-refreshed with locking)\n\t * 4. Environment variable\n\t * 5. Fallback resolver (models.json custom providers)\n\t /\n\tasync getModelAuth(providerId: string, options?: { includeFallback?: boolean }): Promise<ModelAuth \| undefined> {\n\t\tconst runtimeKey = this.runtimeOverrides.get(providerId);\n\t\tif (runtimeKey) return { apiKey: runtimeKey };\n\n\t\tconst cred = this.data[providerId];\n\t\tif (cred?.type === \"api_key\" && cred.key) return { apiKey: resolveConfigValue(cred.key) };\n\n\t\tif (cred?.type === \"oauth\") {\n\t\t\ttry {\n\t\t\t\tif (Date.now() >= cred.expires) {\n\t\t\t\t\treturn (await this.refreshOAuthTokenWithLock(providerId))?.auth;\n\t\t\t\t}\n\t\t\t\treturn await oauthCredentialToAuth(providerId, { ...cred, type: \"oauth\" });\n\t\t\t} catch (error) {\n\t\t\t\tthis.recordError(error);\n\t\t\t\tthis.reload();\n\t\t\t\tconst updated = this.data[providerId];\n\t\t\t\tif (updated?.type === \"oauth\" && Date.now() < updated.expires) {\n\t\t\t\t\treturn oauthCredentialToAuth(providerId, { ...updated, type: \"oauth\" });\n\t\t\t\t}\n\t\t\t\treturn undefined;\n\t\t\t}\n\t\t}\n\n\t\tconst envKey = getEnvApiKey(providerId);\n\t\tif (envKey) return { apiKey: envKey };\n\t\tif (options?.includeFallback !== false) {\n\t\t\tconst fallback = this.fallbackResolver?.(providerId);\n\t\t\tif (fallback) return { apiKey: fallback };\n\t\t}\n\t\treturn undefined;\n\t}\n\n\tasync getApiKey(providerId: string, options?: { includeFallback?: boolean }): Promise<string \| undefined> {\n\t\treturn (await this.getModelAuth(providerId, options))?.apiKey;\n\t}\n\n\t/\n\t Get all registered OAuth providers\n\t /\n\tgetOAuthProviders() {\n\t\treturn getOAuthProviderDescriptors();\n\t}\n\n\tprivate runCredentialMutation<T>(operation: () => Promise<T>): Promise<T> {\n\t\tconst result = this.credentialMutationTail.then(operation, operation);\n\t\tthis.credentialMutationTail = result.then(\n\t\t\t() => undefined,\n\t\t\t() => undefined,\n\t\t);\n\t\treturn result;\n\t}\n\n\t/* Private async adapter for pi-ai's provider-owned Models runtime. */\n\tasCredentialStore(): CredentialStore {\n\t\tconst runtimeCredential = (providerId: string): Credential \| undefined => {\n\t\t\tconst key = this.runtimeOverrides.get(providerId);\n\t\t\treturn key === undefined ? undefined : { type: \"api_key\", key };\n\t\t};\n\t\treturn {\n\t\t\tread: async (providerId) => runtimeCredential(providerId) ?? (this.get(providerId) as Credential \| undefined),\n\t\t\tlist: async (): Promise<readonly CredentialInfo[]> => {\n\t\t\t\tconst providers = new Set([...this.list(), ...this.runtimeOverrides.keys()]);\n\t\t\t\treturn [...providers].map((providerId) => ({\n\t\t\t\t\tproviderId,\n\t\t\t\t\ttype: runtimeCredential(providerId)?.type ?? this.data[providerId].type,\n\t\t\t\t}));\n\t\t\t},\n\t\t\tmodify: (providerId, fn) =>\n\t\t\t\tthis.runCredentialMutation(async () => {\n\t\t\t\t\tlet synchronizedData: AuthStorageData \| undefined;\n\t\t\t\t\ttry {\n\t\t\t\t\t\tconst result = await this.storage.withLockAsync(async (current) => {\n\t\t\t\t\t\t\tconst data = this.parseStorageData(current);\n\t\t\t\t\t\t\tconst next = await fn(data[providerId] as Credential \| undefined);\n\t\t\t\t\t\t\tif (next === undefined) {\n\t\t\t\t\t\t\t\tsynchronizedData = data;\n\t\t\t\t\t\t\t\treturn { result: data[providerId] as Credential \| undefined };\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tconst merged = { ...data, [providerId]: next as AuthCredential };\n\t\t\t\t\t\t\tsynchronizedData = merged;\n\t\t\t\t\t\t\treturn { result: next, next: JSON.stringify(merged, null, 2) };\n\t\t\t\t\t\t});\n\t\t\t\t\t\tif (synchronizedData) {\n\t\t\t\t\t\t\tthis.data = synchronizedData;\n\t\t\t\t\t\t\tthis.bumpCredentialVersion(providerId);\n\t\t\t\t\t\t}\n\t\t\t\t\t\tthis.loadError = null;\n\t\t\t\t\t\treturn result;\n\t\t\t\t\t} catch (error) {\n\t\t\t\t\t\tthis.recordError(error);\n\t\t\t\t\t\tthrow error;\n\t\t\t\t\t}\n\t\t\t\t}),\n\t\t\tdelete: (providerId) =>\n\t\t\t\tthis.runCredentialMutation(async () => {\n\t\t\t\t\ttry {\n\t\t\t\t\t\tif (this.storage.deleteProviderAsync) {\n\t\t\t\t\t\t\tthis.data = this.parseStorageData(await this.storage.deleteProviderAsync(providerId));\n\t\t\t\t\t\t} else {\n\t\t\t\t\t\t\tlet synchronizedData: AuthStorageData \| undefined;\n\t\t\t\t\t\t\tawait this.storage.withLockAsync(async (current) => {\n\t\t\t\t\t\t\t\tconst data = this.parseStorageData(current);\n\t\t\t\t\t\t\t\tdelete data[providerId];\n\t\t\t\t\t\t\t\tsynchronizedData = data;\n\t\t\t\t\t\t\t\treturn { result: undefined, next: JSON.stringify(data, null, 2) };\n\t\t\t\t\t\t\t});\n\t\t\t\t\t\t\tif (synchronizedData) this.data = synchronizedData;\n\t\t\t\t\t\t}\n\t\t\t\t\t\tthis.bumpCredentialVersion(providerId);\n\t\t\t\t\t\tthis.loadError = null;\n\t\t\t\t\t} catch (error) {\n\t\t\t\t\t\tthis.recordError(error);\n\t\t\t\t\t\tthrow error;\n\t\t\t\t\t}\n\t\t\t\t}),\n\t\t};\n\t}\n}\n"]}
1	+ 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Credential storage for API keys and OAuth tokens.\n * Handles loading, saving, and refreshing credentials from auth.json.\n \n Uses file locking to prevent race conditions when multiple pi instances\n * try to refresh tokens simultaneously.\n /\n\nimport {\n\ttype Credential,\n\ttype CredentialInfo,\n\ttype CredentialStore,\n\ttype ModelAuth,\n\ttype OAuthCredential as PiOAuthCredential,\n\ttype OAuthCredentials,\n} from \"@earendil-works/pi-ai\";\nimport { findEnvKeys, getEnvApiKey } from \"@earendil-works/pi-ai/compat\";\nimport { join } from \"path\";\nimport { getAgentConfigPaths, getAgentDir } from \"../config.ts\";\nimport { FileAuthStorageBackend, InMemoryAuthStorageBackend, type AuthStorageBackend } from \"./auth-storage-backends.ts\";\nimport {\n\ttype AtomicOAuthLoginCallbacks,\n\tgetOAuthProviderDescriptors,\n\tloginOAuthProvider,\n\toauthCredentialToAuth,\n\trefreshOAuthProvider,\n} from \"./oauth-provider-bridge.ts\";\nimport { resolveConfigValue } from \"./resolve-config-value.ts\";\n\nexport type ApiKeyCredential = {\n\ttype: \"api_key\";\n\tkey?: string;\n\t/* Provider-scoped configuration persisted alongside the credential. /\n\tenv?: Record<string, string>;\n};\n\nexport type OAuthCredential = {\n\ttype: \"oauth\";\n} & OAuthCredentials;\n\nexport type AuthCredential = ApiKeyCredential \| OAuthCredential;\n\nexport type AuthStorageData = Record<string, AuthCredential>;\n\nexport type AuthStatus = {\n\tconfigured: boolean;\n\tsource?: \"stored\" \| \"runtime\" \| \"environment\" \| \"fallback\" \| \"models_json_key\" \| \"models_json_command\";\n\tlabel?: string;\n};\n\nexport { FileAuthStorageBackend, InMemoryAuthStorageBackend, type AuthStorageBackend } from \"./auth-storage-backends.ts\";\n\n/* Read one persisted provider credential using Atomic's layered config paths. /\nexport function readStoredCredential(providerId: string, authPath?: string \| string[]): Credential \| undefined {\n\treturn AuthStorage.create(authPath).get(providerId) as Credential \| undefined;\n}\n\n/\n Credential storage backed by a JSON file.\n /\nexport class AuthStorage {\n\tprivate data: AuthStorageData = {};\n\tprivate runtimeOverrides: Map<string, string> = new Map();\n\tprivate fallbackResolver?: (provider: string) => string \| undefined;\n\tprivate loadError: Error \| null = null;\n\tprivate errors: Error[] = [];\n\tprivate credentialMutationTail: Promise<void> = Promise.resolve();\n\tprivate credentialVersions = new Map<string, number>();\n\n\tdeclare private storage: AuthStorageBackend;\n\n\tprivate constructor(storage: AuthStorageBackend) {\n\t\tthis.storage = storage;\n\t\tthis.reload();\n\t}\n\n\tstatic create(authPath?: string \| string[]): AuthStorage {\n\t\tconst paths = authPath === undefined\n\t\t\t? getAgentConfigPaths(\"auth.json\")\n\t\t\t: Array.isArray(authPath) ? authPath : [authPath];\n\t\treturn new AuthStorage(new FileAuthStorageBackend(paths[0] ?? join(getAgentDir(), \"auth.json\"), paths));\n\t}\n\n\tstatic fromStorage(storage: AuthStorageBackend): AuthStorage {\n\t\treturn new AuthStorage(storage);\n\t}\n\n\tstatic inMemory(data: AuthStorageData = {}): AuthStorage {\n\t\tconst storage = new InMemoryAuthStorageBackend();\n\t\tstorage.withLock(() => ({ result: undefined, next: JSON.stringify(data, null, 2) }));\n\t\treturn AuthStorage.fromStorage(storage);\n\t}\n\n\t/\n\t Set a runtime API key override (not persisted to disk).\n\t * Used for CLI --api-key flag.\n\t /\n\tsetRuntimeApiKey(provider: string, apiKey: string): void {\n\t\tthis.runtimeOverrides.set(provider, apiKey);\n\t}\n\t/* Read a non-persisted request override without resolving stored credentials. /\n\tgetRuntimeApiKey(provider: string): string \| undefined {\n\t\treturn this.runtimeOverrides.get(provider);\n\t}\n\n\n\t/\n\t Remove a runtime API key override.\n\t /\n\tremoveRuntimeApiKey(provider: string): void {\n\t\tthis.runtimeOverrides.delete(provider);\n\t}\n\n\t/\n\t Set a fallback resolver for API keys not found in auth.json or env vars.\n\t * Used for custom provider keys from models.json.\n\t /\n\tsetFallbackResolver(resolver: (provider: string) => string \| undefined): void {\n\t\tthis.fallbackResolver = resolver;\n\t}\n\n\tprivate recordError(error: unknown): void {\n\t\tconst normalizedError = error instanceof Error ? error : new Error(String(error));\n\t\tthis.errors.push(normalizedError);\n\t}\n\n\tprivate parseStorageData(content: string \| undefined): AuthStorageData {\n\t\tif (!content) {\n\t\t\treturn {};\n\t\t}\n\t\treturn JSON.parse(content) as AuthStorageData;\n\t}\n\n\t/\n\t Reload credentials from storage.\n\t /\n\treload(): void {\n\t\ttry {\n\t\t\t// Pure read: never take the exclusive write lock. Writers replace\n\t\t\t// auth.json atomically, so a lock-free read always sees a complete\n\t\t\t// snapshot. This keeps many concurrent sessions from starving each other\n\t\t\t// on the lock and misreporting configured providers as unreadable under\n\t\t\t// contention (issue #1431).\n\t\t\tconst content = this.readSnapshot();\n\t\t\tthis.data = this.parseStorageData(content);\n\t\t\tthis.loadError = null;\n\t\t} catch (error) {\n\t\t\tthis.loadError = error as Error;\n\t\t\tthis.recordError(error);\n\t\t}\n\t}\n\n\t/\n\t Read the credential snapshot, preferring the backend's lock-free `read()`.\n\t * Falls back to a `withLock`-based read for custom backends that predate\n\t * `read()` so the released `AuthStorageBackend` interface stays compatible.\n\t /\n\tprivate readSnapshot(): string \| undefined {\n\t\tif (this.storage.read) {\n\t\t\treturn this.storage.read();\n\t\t}\n\t\tlet content: string \| undefined;\n\t\tthis.storage.withLock((current) => {\n\t\t\tcontent = current;\n\t\t\treturn { result: undefined };\n\t\t});\n\t\treturn content;\n\t}\n\n\tprivate bumpCredentialVersion(provider: string): void {\n\t\tthis.credentialVersions.set(provider, (this.credentialVersions.get(provider) ?? 0) + 1);\n\t}\n\n\tprivate persistProviderChange(provider: string, credential: AuthCredential \| undefined): void {\n\t\tif (this.loadError) {\n\t\t\tthis.reload();\n\t\t\tif (this.loadError) throw this.loadError;\n\t\t}\n\n\t\ttry {\n\t\t\tconst persistedData = this.storage.withLock((current) => {\n\t\t\t\tconst currentData = this.parseStorageData(current);\n\t\t\t\tconst merged: AuthStorageData = { ...currentData };\n\t\t\t\tif (credential) {\n\t\t\t\t\tmerged[provider] = credential;\n\t\t\t\t} else {\n\t\t\t\t\tdelete merged[provider];\n\t\t\t\t}\n\t\t\t\treturn { result: merged, next: JSON.stringify(merged, null, 2) };\n\t\t\t});\n\t\t\tthis.data = persistedData;\n\t\t\tthis.bumpCredentialVersion(provider);\n\t\t\tthis.loadError = null;\n\t\t} catch (error) {\n\t\t\tthis.recordError(error);\n\t\t\tthrow error instanceof Error ? error : new Error(String(error));\n\t\t}\n\t}\n\n\t/\n\t Get credential for a provider.\n\t /\n\tget(provider: string): AuthCredential \| undefined {\n\t\treturn this.data[provider] ?? undefined;\n\t}\n\n\t/\n\t Set credential for a provider.\n\t /\n\tset(provider: string, credential: AuthCredential): void {\n\t\tthis.persistProviderChange(provider, credential);\n\t}\n\n\t/\n\t Remove credential for a provider.\n\t /\n\tremove(provider: string): void {\n\t\tif (!this.storage.deleteProvider) {\n\t\t\tthis.persistProviderChange(provider, undefined);\n\t\t\treturn;\n\t\t}\n\t\ttry {\n\t\t\tthis.data = this.parseStorageData(this.storage.deleteProvider(provider));\n\t\t\tthis.bumpCredentialVersion(provider);\n\t\t\tthis.loadError = null;\n\t\t} catch (error) {\n\t\t\tthis.recordError(error);\n\t\t\tthrow error instanceof Error ? error : new Error(String(error));\n\t\t}\n\t}\n\n\t/\n\t List all providers with credentials.\n\t /\n\tlist(): string[] {\n\t\treturn Object.keys(this.data);\n\t}\n\n\t/\n\t Check if credentials exist for a provider in auth.json.\n\t /\n\thas(provider: string): boolean {\n\t\treturn provider in this.data;\n\t}\n\n\t/\n\t Check if any form of auth is configured for a provider.\n\t * Unlike getApiKey(), this doesn't refresh OAuth tokens.\n\t /\n\thasAuth(provider: string): boolean {\n\t\tif (this.runtimeOverrides.has(provider)) return true;\n\t\tif (this.data[provider]) return true;\n\t\tif (findEnvKeys(provider)?.[0]) return true;\n\t\tif (this.fallbackResolver?.(provider)) return true;\n\t\treturn false;\n\t}\n\n\t/\n\t Return auth status without exposing credential values or refreshing tokens.\n\t /\n\tgetAuthStatus(provider: string): AuthStatus {\n\t\tif (this.data[provider]) {\n\t\t\treturn { configured: true, source: \"stored\" };\n\t\t}\n\n\t\tif (this.runtimeOverrides.has(provider)) {\n\t\t\treturn { configured: false, source: \"runtime\", label: \"--api-key\" };\n\t\t}\n\n\t\tconst envKeys = findEnvKeys(provider);\n\t\tif (envKeys?.[0]) {\n\t\t\treturn { configured: true, source: \"environment\", label: envKeys[0] };\n\t\t}\n\n\t\tif (this.fallbackResolver?.(provider)) {\n\t\t\treturn { configured: false, source: \"fallback\", label: \"custom provider config\" };\n\t\t}\n\n\t\treturn { configured: false };\n\t}\n\n\t/* Return a copy of all persisted credentials. /\n\tgetAll(): AuthStorageData {\n\t\treturn { ...this.data };\n\t}\n\n\tdrainErrors(): Error[] {\n\t\tconst drained = [...this.errors];\n\t\tthis.errors = [];\n\t\treturn drained;\n\t}\n\n\t/\n\t Returns the error from the most recent failed credential load, or null when\n\t * the last reload succeeded.\n\t \n\t A non-null value means stored credentials could NOT be read — e.g. the auth\n\t * file was temporarily locked by another process (ELOCKED) or contained\n\t * invalid JSON — so an empty/absent credential set is NOT authoritative.\n\t * Callers that would otherwise report \"No API key found\" should surface this\n\t * load failure instead of treating the provider as unauthenticated\n\t * (issue #1431).\n\t /\n\tgetLoadError(): Error \| null {\n\t\treturn this.loadError;\n\t}\n\n\t/\n\t Login to an OAuth provider.\n\t /\n\tasync login(providerId: string, callbacks: AtomicOAuthLoginCallbacks): Promise<void> {\n\t\tconst credential = await loginOAuthProvider(providerId, callbacks);\n\t\tawait this.asCredentialStore().modify(providerId, async () => credential);\n\t}\n\n\t/* Logout through the preserved synchronous persistence path. /\n\tlogout(provider: string): void {\n\t\tthis.remove(provider);\n\t}\n\n\t/* Serialized logout for callers that need persistence completion. /\n\tasync logoutAsync(provider: string): Promise<void> {\n\t\tawait this.asCredentialStore().delete(provider);\n\t}\n\n\t/\n\t Refresh OAuth token with backend locking to prevent race conditions.\n\t * Multiple pi instances may try to refresh simultaneously when tokens expire.\n\t /\n\tprivate async refreshOAuthTokenWithLock(\n\t\tproviderId: string,\n\t): Promise<{ auth: ModelAuth; newCredentials: OAuthCredentials } \| null> {\n\t\treturn this.runCredentialMutation(async () => {\n\t\t\tlet synchronizedData: AuthStorageData \| undefined;\n\t\t\tconst credentialVersion = this.credentialVersions.get(providerId) ?? 0;\n\t\t\tconst result = await this.storage.withLockAsync(async (current) => {\n\t\t\t\tconst currentData = this.parseStorageData(current);\n\t\t\t\tsynchronizedData = currentData;\n\t\t\t\tconst cred = currentData[providerId];\n\t\t\t\tif (cred?.type !== \"oauth\") return { result: null };\n\n\t\t\t\tconst oauthCredential: PiOAuthCredential = { ...cred, type: \"oauth\" };\n\t\t\t\tif (Date.now() < cred.expires) {\n\t\t\t\t\tconst auth = await oauthCredentialToAuth(providerId, oauthCredential);\n\t\t\t\t\treturn { result: auth ? { auth, newCredentials: cred } : null };\n\t\t\t\t}\n\n\t\t\t\tconst refreshed = await refreshOAuthProvider(providerId, oauthCredential);\n\t\t\t\tif (!refreshed) return { result: null };\n\t\t\t\tif ((this.credentialVersions.get(providerId) ?? 0) !== credentialVersion) {\n\t\t\t\t\tsynchronizedData = undefined;\n\t\t\t\t\treturn { result: null };\n\t\t\t\t}\n\t\t\t\tconst merged: AuthStorageData = {\n\t\t\t\t\t...currentData,\n\t\t\t\t\t[providerId]: refreshed.credential,\n\t\t\t\t};\n\t\t\t\tsynchronizedData = merged;\n\t\t\t\treturn {\n\t\t\t\t\tresult: { auth: refreshed.auth, newCredentials: refreshed.credential },\n\t\t\t\t\tnext: JSON.stringify(merged, null, 2),\n\t\t\t\t};\n\t\t\t});\n\n\t\t\tif (synchronizedData) this.data = synchronizedData;\n\t\t\tthis.loadError = null;\n\t\t\treturn result;\n\t\t});\n\t}\n\n\t/\n\t Get API key for a provider.\n\t * Priority:\n\t * 1. Runtime override (CLI --api-key)\n\t * 2. API key from auth.json\n\t * 3. OAuth token from auth.json (auto-refreshed with locking)\n\t * 4. Environment variable\n\t * 5. Fallback resolver (models.json custom providers)\n\t /\n\tasync getModelAuth(providerId: string, options?: { includeFallback?: boolean }): Promise<ModelAuth \| undefined> {\n\t\tconst runtimeKey = this.runtimeOverrides.get(providerId);\n\t\tif (runtimeKey) return { apiKey: runtimeKey };\n\n\t\tconst cred = this.data[providerId];\n\t\tif (cred?.type === \"api_key\" && cred.key) return { apiKey: resolveConfigValue(cred.key) };\n\n\t\tif (cred?.type === \"oauth\") {\n\t\t\ttry {\n\t\t\t\tif (Date.now() >= cred.expires) {\n\t\t\t\t\treturn (await this.refreshOAuthTokenWithLock(providerId))?.auth;\n\t\t\t\t}\n\t\t\t\treturn await oauthCredentialToAuth(providerId, { ...cred, type: \"oauth\" });\n\t\t\t} catch (error) {\n\t\t\t\tthis.recordError(error);\n\t\t\t\tthis.reload();\n\t\t\t\tconst updated = this.data[providerId];\n\t\t\t\tif (updated?.type === \"oauth\" && Date.now() < updated.expires) {\n\t\t\t\t\treturn oauthCredentialToAuth(providerId, { ...updated, type: \"oauth\" });\n\t\t\t\t}\n\t\t\t\treturn undefined;\n\t\t\t}\n\t\t}\n\n\t\tconst envKey = getEnvApiKey(providerId);\n\t\tif (envKey) return { apiKey: envKey };\n\t\tif (options?.includeFallback !== false) {\n\t\t\tconst fallback = this.fallbackResolver?.(providerId);\n\t\t\tif (fallback) return { apiKey: fallback };\n\t\t}\n\t\treturn undefined;\n\t}\n\n\tasync getApiKey(providerId: string, options?: { includeFallback?: boolean }): Promise<string \| undefined> {\n\t\treturn (await this.getModelAuth(providerId, options))?.apiKey;\n\t}\n\n\t/\n\t Get all registered OAuth providers\n\t /\n\tgetOAuthProviders() {\n\t\treturn getOAuthProviderDescriptors();\n\t}\n\n\tprivate runCredentialMutation<T>(operation: () => Promise<T>): Promise<T> {\n\t\tconst result = this.credentialMutationTail.then(operation, operation);\n\t\tthis.credentialMutationTail = result.then(\n\t\t\t() => undefined,\n\t\t\t() => undefined,\n\t\t);\n\t\treturn result;\n\t}\n\n\t/* Private async adapter for pi-ai's provider-owned Models runtime. */\n\tasCredentialStore(): CredentialStore {\n\t\tconst runtimeCredential = (providerId: string): Credential \| undefined => {\n\t\t\tconst key = this.runtimeOverrides.get(providerId);\n\t\t\treturn key === undefined ? undefined : { type: \"api_key\", key };\n\t\t};\n\t\treturn {\n\t\t\tread: async (providerId) => runtimeCredential(providerId) ?? (this.get(providerId) as Credential \| undefined),\n\t\t\tlist: async (): Promise<readonly CredentialInfo[]> => {\n\t\t\t\tconst providers = new Set([...this.list(), ...this.runtimeOverrides.keys()]);\n\t\t\t\treturn [...providers].map((providerId) => ({\n\t\t\t\t\tproviderId,\n\t\t\t\t\ttype: runtimeCredential(providerId)?.type ?? this.data[providerId].type,\n\t\t\t\t}));\n\t\t\t},\n\t\t\tmodify: (providerId, fn) =>\n\t\t\t\tthis.runCredentialMutation(async () => {\n\t\t\t\t\tlet synchronizedData: AuthStorageData \| undefined;\n\t\t\t\t\ttry {\n\t\t\t\t\t\tconst result = await this.storage.withLockAsync(async (current) => {\n\t\t\t\t\t\t\tconst data = this.parseStorageData(current);\n\t\t\t\t\t\t\tconst next = await fn(data[providerId] as Credential \| undefined);\n\t\t\t\t\t\t\tif (next === undefined) {\n\t\t\t\t\t\t\t\tsynchronizedData = data;\n\t\t\t\t\t\t\t\treturn { result: data[providerId] as Credential \| undefined };\n\t\t\t\t\t\t\t}\n\t\t\t\t\t\t\tconst merged = { ...data, [providerId]: next as AuthCredential };\n\t\t\t\t\t\t\tsynchronizedData = merged;\n\t\t\t\t\t\t\treturn { result: next, next: JSON.stringify(merged, null, 2) };\n\t\t\t\t\t\t});\n\t\t\t\t\t\tif (synchronizedData) {\n\t\t\t\t\t\t\tthis.data = synchronizedData;\n\t\t\t\t\t\t\tthis.bumpCredentialVersion(providerId);\n\t\t\t\t\t\t}\n\t\t\t\t\t\tthis.loadError = null;\n\t\t\t\t\t\treturn result;\n\t\t\t\t\t} catch (error) {\n\t\t\t\t\t\tthis.recordError(error);\n\t\t\t\t\t\tthrow error;\n\t\t\t\t\t}\n\t\t\t\t}),\n\t\t\tdelete: (providerId) =>\n\t\t\t\tthis.runCredentialMutation(async () => {\n\t\t\t\t\ttry {\n\t\t\t\t\t\tif (this.storage.deleteProviderAsync) {\n\t\t\t\t\t\t\tthis.data = this.parseStorageData(await this.storage.deleteProviderAsync(providerId));\n\t\t\t\t\t\t} else {\n\t\t\t\t\t\t\tlet synchronizedData: AuthStorageData \| undefined;\n\t\t\t\t\t\t\tawait this.storage.withLockAsync(async (current) => {\n\t\t\t\t\t\t\t\tconst data = this.parseStorageData(current);\n\t\t\t\t\t\t\t\tdelete data[providerId];\n\t\t\t\t\t\t\t\tsynchronizedData = data;\n\t\t\t\t\t\t\t\treturn { result: undefined, next: JSON.stringify(data, null, 2) };\n\t\t\t\t\t\t\t});\n\t\t\t\t\t\t\tif (synchronizedData) this.data = synchronizedData;\n\t\t\t\t\t\t}\n\t\t\t\t\t\tthis.bumpCredentialVersion(providerId);\n\t\t\t\t\t\tthis.loadError = null;\n\t\t\t\t\t} catch (error) {\n\t\t\t\t\t\tthis.recordError(error);\n\t\t\t\t\t\tthrow error;\n\t\t\t\t\t}\n\t\t\t\t}),\n\t\t};\n\t}\n}\n"]}

package/dist/core/bash-executor.d.ts CHANGED Viewed

@@ -5,12 +5,14 @@
  * - AgentSession.executeBash() for interactive and RPC modes
  * - Direct calls from modes that need bash execution
  */
-import type { BashOperations } from "./tools/bash.ts";
+import type { BashOperations, BashOutputChannel } from "./tools/bash.ts";
 export interface BashExecutorOptions {
-    /** Callback for streaming output chunks (already sanitized) */
-    onChunk?: (chunk: string) => void;
+    /** Callback for streaming output chunks (already sanitized), preserving the source channel. */
+    onChunk?: (chunk: string, channel: BashOutputChannel) => void;
     /** AbortSignal for cancellation */
     signal?: AbortSignal;
+    /** Complete environment for the execution backend. */
+    env?: NodeJS.ProcessEnv;
     /** Run with PTY handling when supported by the operations backend */
     pty?: boolean;
 }

package/dist/core/bash-executor.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"bash-executor.d.ts","sourceRoot":"","sources":["../../src/core/bash-executor.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AASH,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,iBAAiB,CAAC;~~AAOtD~~,MAAM,WAAW,mBAAmB;IACnC,+~~DAA~~+D;IAC/D,OAAO,CAAC,EAAE,CAAC,KAAK,EAAE,MAAM,KAAK,IAAI,CAAC;~~IAClC~~,mCAAmC;IACnC,MAAM,CAAC,EAAE,WAAW,CAAC;IACrB,qEAAqE;IACrE,GAAG,CAAC,EAAE,OAAO,CAAC;CACd;AAED,MAAM,WAAW,UAAU;IAC1B,sEAAsE;IACtE,MAAM,EAAE,MAAM,CAAC;IACf,wDAAwD;IACxD,QAAQ,EAAE,MAAM,GAAG,SAAS,CAAC;IAC7B,mDAAmD;IACnD,SAAS,EAAE,OAAO,CAAC;IACnB,uCAAuC;IACvC,SAAS,EAAE,OAAO,CAAC;IACnB,yFAAyF;IACzF,cAAc,CAAC,EAAE,MAAM,CAAC;CACxB;AAMD;;;GAGG;AACH,wBAAsB,yBAAyB,CAC9C,OAAO,EAAE,MAAM,EACf,GAAG,EAAE,MAAM,EACX,UAAU,EAAE,cAAc,EAC1B,OAAO,CAAC,EAAE,mBAAmB,GAC3B,OAAO,CAAC,UAAU,CAAC,CAsGrB"}
1	+ {"version":3,"file":"bash-executor.d.ts","sourceRoot":"","sources":["../../src/core/bash-executor.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AASH,OAAO,KAAK,EAAE,cAAc,EAAE,iBAAiB,EAAE,MAAM,iBAAiB,CAAC;AAOzE,MAAM,WAAW,mBAAmB;IACnC,+FAA+F;IAC/F,OAAO,CAAC,EAAE,CAAC,KAAK,EAAE,MAAM,EAAE,OAAO,EAAE,iBAAiB,KAAK,IAAI,CAAC;IAC9D,mCAAmC;IACnC,MAAM,CAAC,EAAE,WAAW,CAAC;IACrB,sDAAsD;IACtD,GAAG,CAAC,EAAE,MAAM,CAAC,UAAU,CAAC;IACxB,qEAAqE;IACrE,GAAG,CAAC,EAAE,OAAO,CAAC;CACd;AAED,MAAM,WAAW,UAAU;IAC1B,sEAAsE;IACtE,MAAM,EAAE,MAAM,CAAC;IACf,wDAAwD;IACxD,QAAQ,EAAE,MAAM,GAAG,SAAS,CAAC;IAC7B,mDAAmD;IACnD,SAAS,EAAE,OAAO,CAAC;IACnB,uCAAuC;IACvC,SAAS,EAAE,OAAO,CAAC;IACnB,yFAAyF;IACzF,cAAc,CAAC,EAAE,MAAM,CAAC;CACxB;AAMD;;;GAGG;AACH,wBAAsB,yBAAyB,CAC9C,OAAO,EAAE,MAAM,EACf,GAAG,EAAE,MAAM,EACX,UAAU,EAAE,cAAc,EAC1B,OAAO,CAAC,EAAE,mBAAmB,GAC3B,OAAO,CAAC,UAAU,CAAC,CAsGrB"}

package/dist/core/bash-executor.js CHANGED Viewed

@@ -38,11 +38,11 @@ export async function executeBashWithOperations(command, cwd, operations, option
             tempFileStream.write(chunk);
         }
     };
-    const decoder = new TextDecoder();
-    const onData = (data) => {
+    const decoders = { stdout: new TextDecoder(), stderr: new TextDecoder() };
+    const onData = (data, channel = "stdout") => {
         totalBytes += data.length;
         // Sanitize: strip ANSI, replace binary garbage, normalize newlines
-        const text = sanitizeBinaryOutput(stripAnsi(decoder.decode(data, { stream: true }))).replace(/\r/g, "");
+        const text = sanitizeBinaryOutput(stripAnsi(decoders[channel].decode(data, { stream: true }))).replace(/\r/g, "");
         // Start writing to temp file if exceeds threshold
         if (totalBytes > DEFAULT_MAX_BYTES) {
             ensureTempFile();
@@ -59,13 +59,14 @@ export async function executeBashWithOperations(command, cwd, operations, option
         }
         // Stream to callback
         if (options?.onChunk) {
-            options.onChunk(text);
+            options.onChunk(text, channel);
         }
     };
     try {
         const result = await operations.exec(command, cwd, {
             onData,
             signal: options?.signal,
+            env: options?.env,
             pty: options?.pty,
         });
         const fullOutput = outputChunks.join("");

package/dist/core/bash-executor.js.map CHANGED Viewed

	@@ -1 +1 @@
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Bash command execution with streaming support and cancellation.\n \n This module provides a unified bash execution implementation used by:\n * - AgentSession.executeBash() for interactive and RPC modes\n * - Direct calls from modes that need bash execution\n /\n\nimport { randomBytes } from \"node:crypto\";\nimport { createWriteStream, type WriteStream } from \"node:fs\";\nimport { tmpdir } from \"node:os\";\nimport { join } from \"node:path\";\nimport { APP_NAME } from \"../config.ts\";\nimport { stripAnsi } from \"../utils/ansi.ts\";\nimport { sanitizeBinaryOutput } from \"../utils/shell.ts\";\nimport type { BashOperations, BashOutputChannel } from \"./tools/bash.ts\";\nimport { DEFAULT_MAX_BYTES, truncateTail } from \"./tools/truncate.ts\";\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface BashExecutorOptions {\n\t/* Callback for streaming output chunks (already sanitized), preserving the source channel. /\n\tonChunk?: (chunk: string, channel: BashOutputChannel) => void;\n\t/* AbortSignal for cancellation /\n\tsignal?: AbortSignal;\n\t/* Complete environment for the execution backend. /\n\tenv?: NodeJS.ProcessEnv;\n\t/* Run with PTY handling when supported by the operations backend /\n\tpty?: boolean;\n}\n\nexport interface BashResult {\n\t/* Combined stdout + stderr output (sanitized, possibly truncated) /\n\toutput: string;\n\t/* Process exit code (undefined if killed/cancelled) /\n\texitCode: number \| undefined;\n\t/* Whether the command was cancelled via signal /\n\tcancelled: boolean;\n\t/* Whether the output was truncated /\n\ttruncated: boolean;\n\t/* Path to temp file containing full output (if output exceeded truncation threshold) /\n\tfullOutputPath?: string;\n}\n\n// ============================================================================\n// Implementation\n// ============================================================================\n\n/\n Execute a bash command using custom BashOperations.\n * Used for remote execution (SSH, containers, etc.).\n /\nexport async function executeBashWithOperations(\n\tcommand: string,\n\tcwd: string,\n\toperations: BashOperations,\n\toptions?: BashExecutorOptions,\n): Promise<BashResult> {\n\tconst outputChunks: string[] = [];\n\tlet outputBytes = 0;\n\tconst maxOutputBytes = DEFAULT_MAX_BYTES 2;\n\n\tlet tempFilePath: string \| undefined;\n\tlet tempFileStream: WriteStream \| undefined;\n\tlet totalBytes = 0;\n\n\tconst ensureTempFile = () => {\n\t\tif (tempFilePath) {\n\t\t\treturn;\n\t\t}\n\t\tconst id = randomBytes(8).toString(\"hex\");\n\t\ttempFilePath = join(tmpdir(), `${APP_NAME}-bash-${id}.log`);\n\t\ttempFileStream = createWriteStream(tempFilePath);\n\t\tfor (const chunk of outputChunks) {\n\t\t\ttempFileStream.write(chunk);\n\t\t}\n\t};\n\n\tconst decoders: Record<BashOutputChannel, TextDecoder> = { stdout: new TextDecoder(), stderr: new TextDecoder() };\n\tconst onData = (data: Buffer, channel: BashOutputChannel = \"stdout\") => {\n\t\ttotalBytes += data.length;\n\n\t\t// Sanitize: strip ANSI, replace binary garbage, normalize newlines\n\t\tconst text = sanitizeBinaryOutput(stripAnsi(decoders[channel].decode(data, { stream: true }))).replace(/\\r/g, \"\");\n\n\t\t// Start writing to temp file if exceeds threshold\n\t\tif (totalBytes > DEFAULT_MAX_BYTES) {\n\t\t\tensureTempFile();\n\t\t}\n\n\t\tif (tempFileStream) {\n\t\t\ttempFileStream.write(text);\n\t\t}\n\n\t\t// Keep rolling buffer\n\t\toutputChunks.push(text);\n\t\toutputBytes += text.length;\n\t\twhile (outputBytes > maxOutputBytes && outputChunks.length > 1) {\n\t\t\tconst removed = outputChunks.shift()!;\n\t\t\toutputBytes -= removed.length;\n\t\t}\n\n\t\t// Stream to callback\n\t\tif (options?.onChunk) {\n\t\t\toptions.onChunk(text, channel);\n\t\t}\n\t};\n\n\ttry {\n\t\tconst result = await operations.exec(command, cwd, {\n\t\t\tonData,\n\t\t\tsignal: options?.signal,\n\t\t\tenv: options?.env,\n\t\t\tpty: options?.pty,\n\t\t});\n\n\t\tconst fullOutput = outputChunks.join(\"\");\n\t\tconst truncationResult = truncateTail(fullOutput);\n\t\tif (truncationResult.truncated) {\n\t\t\tensureTempFile();\n\t\t}\n\t\tif (tempFileStream) {\n\t\t\ttempFileStream.end();\n\t\t}\n\t\tconst cancelled = options?.signal?.aborted ?? false;\n\n\t\treturn {\n\t\t\toutput: truncationResult.truncated ? truncationResult.content : fullOutput,\n\t\t\texitCode: cancelled ? undefined : (result.exitCode ?? undefined),\n\t\t\tcancelled,\n\t\t\ttruncated: truncationResult.truncated,\n\t\t\tfullOutputPath: tempFilePath,\n\t\t};\n\t} catch (err) {\n\t\t// Check if it was an abort\n\t\tif (options?.signal?.aborted) {\n\t\t\tconst fullOutput = outputChunks.join(\"\");\n\t\t\tconst truncationResult = truncateTail(fullOutput);\n\t\t\tif (truncationResult.truncated) {\n\t\t\t\tensureTempFile();\n\t\t\t}\n\t\t\tif (tempFileStream) {\n\t\t\t\ttempFileStream.end();\n\t\t\t}\n\t\t\treturn {\n\t\t\t\toutput: truncationResult.truncated ? truncationResult.content : fullOutput,\n\t\t\t\texitCode: undefined,\n\t\t\t\tcancelled: true,\n\t\t\t\ttruncated: truncationResult.truncated,\n\t\t\t\tfullOutputPath: tempFilePath,\n\t\t\t};\n\t\t}\n\n\t\tif (tempFileStream) {\n\t\t\ttempFileStream.end();\n\t\t}\n\n\t\tthrow err;\n\t}\n}\n"]}

package/dist/core/builtin-packages.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/core/builtin-packages.js CHANGED Viewed

@@ -33,12 +33,6 @@ const WORKSPACE_BUILTINS = [
         distDirName: "intercom",
         requiredEntry: "index.ts",
     },
-    {
-        packageName: "@bastani/cursor",
-        workspaceDirName: "cursor",
-        distDirName: "cursor",
-        requiredEntry: "index.ts",
-    },
 ];
 const BUILTIN_PACKAGES = WORKSPACE_BUILTINS.map((spec) => ({
     packageName: spec.packageName,

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	@@ -1 +1 @@
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{ existsSync, readFileSync } from \"node:fs\";\nimport { join, resolve } from \"node:path\";\nimport { getPackageDir } from \"../config.ts\";\nimport { moduleDirFromMetaUrl } from \"../utils/split-launcher.ts\";\n\ninterface BuiltinPackageDescriptor {\n\treadonly packageName: string;\n\treadonly distDirName: string;\n\treadonly requiredEntry: string;\n\treadonly sourceCandidates: (context: BuiltinPackageCandidateContext) => string[];\n}\n\ninterface BuiltinPackageCandidateContext {\n\treadonly here: string;\n\treadonly packageDir: string;\n\treadonly isSourceCheckout: boolean;\n}\n\ninterface WorkspaceBuiltinSpec {\n\treadonly packageName: string;\n\treadonly workspaceDirName: string;\n\treadonly distDirName: string;\n\treadonly requiredEntry: string;\n}\n\nconst WORKSPACE_BUILTINS: readonly WorkspaceBuiltinSpec[] = [\n\t{\n\t\tpackageName: \"@bastani/workflows\",\n\t\tworkspaceDirName: \"workflows\",\n\t\tdistDirName: \"workflows\",\n\t\trequiredEntry: join(\"src\", \"extension\", \"index.ts\"),\n\t},\n\t{\n\t\tpackageName: \"@bastani/subagents\",\n\t\tworkspaceDirName: \"subagents\",\n\t\tdistDirName: \"subagents\",\n\t\trequiredEntry: join(\"src\", \"extension\", \"index.ts\"),\n\t},\n\t{\n\t\tpackageName: \"@bastani/mcp\",\n\t\tworkspaceDirName: \"mcp\",\n\t\tdistDirName: \"mcp\",\n\t\trequiredEntry: \"index.ts\",\n\t},\n\t{\n\t\tpackageName: \"@bastani/web-access\",\n\t\tworkspaceDirName: \"web-access\",\n\t\tdistDirName: \"web-access\",\n\t\trequiredEntry: \"index.ts\",\n\t},\n\t{\n\t\tpackageName: \"@bastani/intercom\",\n\t\tworkspaceDirName: \"intercom\",\n\t\tdistDirName: \"intercom\",\n\t\trequiredEntry: \"index.ts\",\n\t},\n];\n\nconst BUILTIN_PACKAGES: readonly BuiltinPackageDescriptor[] = WORKSPACE_BUILTINS.map(\n\t(spec): BuiltinPackageDescriptor => ({\n\t\tpackageName: spec.packageName,\n\t\tdistDirName: spec.distDirName,\n\t\trequiredEntry: spec.requiredEntry,\n\t\tsourceCandidates: ({ here, packageDir, isSourceCheckout }) =>\n\t\t\tisSourceCheckout\n\t\t\t\t? [\n\t\t\t\t\t\tjoin(packageDir, \"..\", spec.workspaceDirName),\n\t\t\t\t\t\tjoin(here, \"..\", \"..\", \"..\", spec.workspaceDirName),\n\t\t\t\t\t]\n\t\t\t\t: [],\n\t}),\n);\n\nfunction readPackageName(packageJsonPath: string): string \| undefined {\n\ttry {\n\t\tconst pkg = JSON.parse(readFileSync(packageJsonPath, \"utf-8\")) as { name?: string };\n\t\treturn pkg.name;\n\t} catch {\n\t\treturn undefined;\n\t}\n}\n\nfunction isPackageDir(dir: string, descriptor: BuiltinPackageDescriptor): boolean {\n\treturn (\n\t\texistsSync(join(dir, descriptor.requiredEntry)) &&\n\t\treadPackageName(join(dir, \"package.json\")) === descriptor.packageName\n\t);\n}\n\nfunction firstExistingPackageDir(candidates: string[], descriptor: BuiltinPackageDescriptor): string \| undefined {\n\tconst seen = new Set<string>();\n\n\tfor (const candidate of candidates) {\n\t\tconst resolved = resolve(candidate);\n\t\tif (seen.has(resolved)) {\n\t\t\tcontinue;\n\t\t}\n\t\tseen.add(resolved);\n\t\tif (isPackageDir(resolved, descriptor)) {\n\t\t\treturn resolved;\n\t\t}\n\t}\n\n\treturn undefined;\n}\n\nfunction distCandidates(context: BuiltinPackageCandidateContext, descriptor: BuiltinPackageDescriptor): string[] {\n\tconst { here, packageDir } = context;\n\treturn [\n\t\tjoin(here, \"..\", \"builtin\", descriptor.distDirName),\n\t\tjoin(packageDir, \"builtin\", descriptor.distDirName),\n\t\tjoin(packageDir, \"dist\", \"builtin\", descriptor.distDirName),\n\t];\n}\nfunction getBuiltinPackageCandidateContext(): BuiltinPackageCandidateContext {\n\tconst packageDir = getPackageDir();\n\t// In the split launcher the bundled import.meta.url is a foreign-OS build\n\t// path; fall back to the package dir (the executable dir), where `builtin/`\n\t// sits, so distCandidates still resolves.\n\tconst context: BuiltinPackageCandidateContext = {\n\t\there: moduleDirFromMetaUrl(import.meta.url),\n\t\tpackageDir,\n\t\tisSourceCheckout: false,\n\t};\n\treturn {\n\t\t...context,\n\t\tisSourceCheckout: existsSync(join(context.packageDir, \"src\", \"main.ts\")),\n\t};\n}\n\n/*\n Built-in pi package roots shipped with this Atomic distribution.\n \n Development layout:\n * packages/coding-agent/src/core -> packages/<builtin>\n \n npm/dist layout:\n * packages/coding-agent/dist/core -> packages/coding-agent/dist/builtin/<package>\n \n Bun binary layout:\n * process executable dir -> builtin/<package>\n */\nexport function getBuiltinPackagePaths(): string[] {\n\tconst context = getBuiltinPackageCandidateContext();\n\n\treturn BUILTIN_PACKAGES.flatMap((descriptor) => {\n\t\tconst packageDir = firstExistingPackageDir(\n\t\t\t[...descriptor.sourceCandidates(context), ...distCandidates(context, descriptor)],\n\t\t\tdescriptor,\n\t\t);\n\t\treturn packageDir ? [packageDir] : [];\n\t});\n}\n"]}