@bastani/atomic 0.9.10 → 0.9.11-alpha.10

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (2339) hide show
  1. package/CHANGELOG.md +255 -0
  2. package/README.md +15 -10
  3. package/dist/builtin/intercom/CHANGELOG.md +6 -0
  4. package/dist/builtin/intercom/package.json +4 -4
  5. package/dist/builtin/mcp/CHANGELOG.md +18 -0
  6. package/dist/builtin/mcp/README.md +3 -3
  7. package/dist/builtin/mcp/cli.js +0 -1
  8. package/dist/builtin/mcp/commands.ts +7 -3
  9. package/dist/builtin/mcp/config.ts +0 -2
  10. package/dist/builtin/mcp/package.json +6 -6
  11. package/dist/builtin/mcp/sampling-handler.ts +1 -5
  12. package/dist/builtin/mcp/types.ts +0 -1
  13. package/dist/builtin/subagents/CHANGELOG.md +40 -0
  14. package/dist/builtin/subagents/README.md +10 -1
  15. package/dist/builtin/subagents/agents/code-simplifier.md +48 -103
  16. package/dist/builtin/subagents/agents/codebase-analyzer.md +28 -131
  17. package/dist/builtin/subagents/agents/codebase-locator.md +25 -84
  18. package/dist/builtin/subagents/agents/codebase-online-researcher.md +61 -260
  19. package/dist/builtin/subagents/agents/codebase-pattern-finder.md +30 -208
  20. package/dist/builtin/subagents/agents/codebase-research-analyzer.md +29 -151
  21. package/dist/builtin/subagents/agents/codebase-research-locator.md +22 -119
  22. package/dist/builtin/subagents/agents/debugger.md +29 -65
  23. package/dist/builtin/subagents/agents/worker.md +24 -31
  24. package/dist/builtin/subagents/package.json +5 -5
  25. package/dist/builtin/subagents/prompts/gather-context-and-clarify.md +18 -11
  26. package/dist/builtin/subagents/prompts/parallel-cleanup.md +34 -33
  27. package/dist/builtin/subagents/prompts/parallel-context-build.md +22 -36
  28. package/dist/builtin/subagents/prompts/parallel-handoff-plan.md +20 -52
  29. package/dist/builtin/subagents/prompts/parallel-research.md +17 -41
  30. package/dist/builtin/subagents/prompts/parallel-review.md +23 -28
  31. package/dist/builtin/subagents/prompts/review-loop.md +18 -27
  32. package/dist/builtin/subagents/skills/subagent/SKILL.md +6 -6
  33. package/dist/builtin/subagents/src/agents/agent-discovery.ts +26 -15
  34. package/dist/builtin/subagents/src/agents/agent-loaders.ts +48 -34
  35. package/dist/builtin/subagents/src/agents/agent-management-helpers.ts +80 -31
  36. package/dist/builtin/subagents/src/agents/agent-management.ts +194 -55
  37. package/dist/builtin/subagents/src/agents/agent-overrides.ts +85 -32
  38. package/dist/builtin/subagents/src/agents/agent-paths.ts +4 -1
  39. package/dist/builtin/subagents/src/agents/agent-selection.ts +1 -1
  40. package/dist/builtin/subagents/src/agents/agent-serializer.ts +1 -4
  41. package/dist/builtin/subagents/src/agents/agents.ts +9 -9
  42. package/dist/builtin/subagents/src/agents/chain-serializer.ts +9 -5
  43. package/dist/builtin/subagents/src/agents/identity.ts +12 -3
  44. package/dist/builtin/subagents/src/agents/skills-paths.ts +64 -24
  45. package/dist/builtin/subagents/src/agents/skills.ts +29 -26
  46. package/dist/builtin/subagents/src/extension/doctor.ts +31 -20
  47. package/dist/builtin/subagents/src/extension/fanout-child.ts +27 -12
  48. package/dist/builtin/subagents/src/extension/index.ts +119 -43
  49. package/dist/builtin/subagents/src/extension/prompt-guidance.ts +4 -2
  50. package/dist/builtin/subagents/src/extension/schemas.ts +304 -177
  51. package/dist/builtin/subagents/src/extension/startup-maintenance.ts +137 -73
  52. package/dist/builtin/subagents/src/intercom/intercom-bridge.ts +49 -21
  53. package/dist/builtin/subagents/src/intercom/result-intercom.ts +76 -38
  54. package/dist/builtin/subagents/src/runs/background/async-event-journal.ts +12 -6
  55. package/dist/builtin/subagents/src/runs/background/async-execution-chain.ts +183 -57
  56. package/dist/builtin/subagents/src/runs/background/async-execution-common.ts +15 -18
  57. package/dist/builtin/subagents/src/runs/background/async-execution-single.ts +67 -26
  58. package/dist/builtin/subagents/src/runs/background/async-execution-types.ts +8 -8
  59. package/dist/builtin/subagents/src/runs/background/async-execution.ts +1 -1
  60. package/dist/builtin/subagents/src/runs/background/async-job-tracker.ts +86 -32
  61. package/dist/builtin/subagents/src/runs/background/async-resume.ts +93 -36
  62. package/dist/builtin/subagents/src/runs/background/async-status.ts +82 -27
  63. package/dist/builtin/subagents/src/runs/background/completion-claims.ts +12 -5
  64. package/dist/builtin/subagents/src/runs/background/completion-dedupe.ts +3 -1
  65. package/dist/builtin/subagents/src/runs/background/completion-notification.ts +3 -1
  66. package/dist/builtin/subagents/src/runs/background/notify.ts +38 -18
  67. package/dist/builtin/subagents/src/runs/background/parallel-groups.ts +28 -14
  68. package/dist/builtin/subagents/src/runs/background/result-delivery-processor.ts +147 -79
  69. package/dist/builtin/subagents/src/runs/background/result-file-claims.ts +20 -5
  70. package/dist/builtin/subagents/src/runs/background/result-quarantine.ts +7 -2
  71. package/dist/builtin/subagents/src/runs/background/result-status.ts +11 -5
  72. package/dist/builtin/subagents/src/runs/background/result-watcher-data.ts +18 -5
  73. package/dist/builtin/subagents/src/runs/background/result-watcher.ts +104 -35
  74. package/dist/builtin/subagents/src/runs/background/run-id-resolver.ts +28 -7
  75. package/dist/builtin/subagents/src/runs/background/run-status.ts +120 -32
  76. package/dist/builtin/subagents/src/runs/background/stale-run-reconciler.ts +98 -39
  77. package/dist/builtin/subagents/src/runs/background/subagent-runner-dynamic.ts +185 -37
  78. package/dist/builtin/subagents/src/runs/background/subagent-runner-finalize.ts +23 -9
  79. package/dist/builtin/subagents/src/runs/background/subagent-runner-output.ts +6 -2
  80. package/dist/builtin/subagents/src/runs/background/subagent-runner-parallel-helpers.ts +34 -18
  81. package/dist/builtin/subagents/src/runs/background/subagent-runner-parallel.ts +175 -26
  82. package/dist/builtin/subagents/src/runs/background/subagent-runner-sequential.ts +68 -23
  83. package/dist/builtin/subagents/src/runs/background/subagent-runner-state.ts +200 -49
  84. package/dist/builtin/subagents/src/runs/background/subagent-runner-step.ts +82 -49
  85. package/dist/builtin/subagents/src/runs/background/subagent-runner-streaming.ts +33 -11
  86. package/dist/builtin/subagents/src/runs/background/subagent-runner-types.ts +16 -6
  87. package/dist/builtin/subagents/src/runs/background/subagent-runner-utils.ts +2 -3
  88. package/dist/builtin/subagents/src/runs/background/subagent-runner.ts +11 -8
  89. package/dist/builtin/subagents/src/runs/foreground/chain-execution-details.ts +5 -2
  90. package/dist/builtin/subagents/src/runs/foreground/chain-execution-dynamic-step.ts +115 -31
  91. package/dist/builtin/subagents/src/runs/foreground/chain-execution-parallel-runner.ts +71 -54
  92. package/dist/builtin/subagents/src/runs/foreground/chain-execution-parallel-step.ts +104 -37
  93. package/dist/builtin/subagents/src/runs/foreground/chain-execution-sequential-step.ts +102 -61
  94. package/dist/builtin/subagents/src/runs/foreground/chain-execution-types.ts +24 -10
  95. package/dist/builtin/subagents/src/runs/foreground/chain-execution.ts +9 -6
  96. package/dist/builtin/subagents/src/runs/foreground/detached-cleanup-barrier.ts +22 -22
  97. package/dist/builtin/subagents/src/runs/foreground/execution-attempt-control.ts +45 -40
  98. package/dist/builtin/subagents/src/runs/foreground/execution-attempt-finalize.ts +6 -5
  99. package/dist/builtin/subagents/src/runs/foreground/execution-attempt.ts +118 -43
  100. package/dist/builtin/subagents/src/runs/foreground/execution-detach-reservations.ts +17 -7
  101. package/dist/builtin/subagents/src/runs/foreground/execution-detach-route.ts +5 -3
  102. package/dist/builtin/subagents/src/runs/foreground/execution-intercom-detach.ts +39 -35
  103. package/dist/builtin/subagents/src/runs/foreground/execution-run-sync.ts +81 -42
  104. package/dist/builtin/subagents/src/runs/foreground/execution-structured-retries.ts +27 -21
  105. package/dist/builtin/subagents/src/runs/foreground/execution-updates.ts +2 -5
  106. package/dist/builtin/subagents/src/runs/foreground/execution-utils.ts +9 -4
  107. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-async.ts +69 -25
  108. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-chain.ts +36 -19
  109. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-context.ts +95 -62
  110. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-input.ts +30 -9
  111. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-parallel-task.ts +106 -96
  112. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-parallel.ts +68 -36
  113. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-resume.ts +262 -83
  114. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-runtime.ts +6 -1
  115. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-single.ts +67 -41
  116. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-status.ts +129 -44
  117. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-types.ts +20 -3
  118. package/dist/builtin/subagents/src/runs/foreground/subagent-executor-worktree.ts +8 -6
  119. package/dist/builtin/subagents/src/runs/foreground/subagent-executor.ts +65 -47
  120. package/dist/builtin/subagents/src/runs/shared/chain-outputs.ts +37 -12
  121. package/dist/builtin/subagents/src/runs/shared/dynamic-fanout.ts +120 -34
  122. package/dist/builtin/subagents/src/runs/shared/final-drain.ts +12 -7
  123. package/dist/builtin/subagents/src/runs/shared/intercom-group.ts +3 -2
  124. package/dist/builtin/subagents/src/runs/shared/long-running-guard.ts +8 -3
  125. package/dist/builtin/subagents/src/runs/shared/mcp-direct-tool-allowlist.ts +42 -20
  126. package/dist/builtin/subagents/src/runs/shared/model-candidate-filter.ts +8 -4
  127. package/dist/builtin/subagents/src/runs/shared/model-fallback.ts +103 -38
  128. package/dist/builtin/subagents/src/runs/shared/nested-events-control.ts +30 -20
  129. package/dist/builtin/subagents/src/runs/shared/nested-events-core.ts +45 -20
  130. package/dist/builtin/subagents/src/runs/shared/nested-events-projection.ts +57 -23
  131. package/dist/builtin/subagents/src/runs/shared/nested-events-registry.ts +77 -29
  132. package/dist/builtin/subagents/src/runs/shared/nested-events-sanitize.ts +99 -42
  133. package/dist/builtin/subagents/src/runs/shared/nested-events.ts +32 -26
  134. package/dist/builtin/subagents/src/runs/shared/nested-path.ts +22 -17
  135. package/dist/builtin/subagents/src/runs/shared/nested-render.ts +31 -10
  136. package/dist/builtin/subagents/src/runs/shared/parallel-utils.ts +10 -8
  137. package/dist/builtin/subagents/src/runs/shared/pi-args.ts +59 -33
  138. package/dist/builtin/subagents/src/runs/shared/pi-spawn.ts +17 -13
  139. package/dist/builtin/subagents/src/runs/shared/run-history.ts +13 -6
  140. package/dist/builtin/subagents/src/runs/shared/single-output.ts +11 -6
  141. package/dist/builtin/subagents/src/runs/shared/spawn-env.ts +21 -0
  142. package/dist/builtin/subagents/src/runs/shared/structured-output.ts +33 -19
  143. package/dist/builtin/subagents/src/runs/shared/subagent-control.ts +59 -48
  144. package/dist/builtin/subagents/src/runs/shared/subagent-prompt-runtime.ts +18 -11
  145. package/dist/builtin/subagents/src/runs/shared/workflow-graph.ts +41 -11
  146. package/dist/builtin/subagents/src/runs/shared/worktree-post-create.ts +46 -10
  147. package/dist/builtin/subagents/src/runs/shared/worktree-root.ts +21 -5
  148. package/dist/builtin/subagents/src/runs/shared/worktree.ts +89 -34
  149. package/dist/builtin/subagents/src/shared/artifacts.ts +137 -7
  150. package/dist/builtin/subagents/src/shared/event-jsonl-writer.ts +49 -13
  151. package/dist/builtin/subagents/src/shared/fast-mode.ts +13 -6
  152. package/dist/builtin/subagents/src/shared/fork-context.ts +7 -4
  153. package/dist/builtin/subagents/src/shared/formatters.ts +14 -9
  154. package/dist/builtin/subagents/src/shared/jsonl-writer.ts +2 -1
  155. package/dist/builtin/subagents/src/shared/model-info.ts +10 -3
  156. package/dist/builtin/subagents/src/shared/post-exit-stdio-guard.ts +7 -6
  157. package/dist/builtin/subagents/src/shared/session-tokens.ts +2 -1
  158. package/dist/builtin/subagents/src/shared/settings.ts +43 -43
  159. package/dist/builtin/subagents/src/shared/status-format.ts +10 -2
  160. package/dist/builtin/subagents/src/shared/types-async.ts +22 -19
  161. package/dist/builtin/subagents/src/shared/types-config.ts +1 -1
  162. package/dist/builtin/subagents/src/shared/types-depth.ts +23 -11
  163. package/dist/builtin/subagents/src/shared/types-results.ts +49 -6
  164. package/dist/builtin/subagents/src/shared/types-runtime.ts +16 -17
  165. package/dist/builtin/subagents/src/shared/types.ts +2 -2
  166. package/dist/builtin/subagents/src/shared/utils.ts +34 -20
  167. package/dist/builtin/subagents/src/slash/prompt-template-bridge.ts +44 -47
  168. package/dist/builtin/subagents/src/slash/saved-chain-mapping.ts +5 -7
  169. package/dist/builtin/subagents/src/slash/slash-bridge.ts +3 -3
  170. package/dist/builtin/subagents/src/slash/slash-commands.ts +78 -52
  171. package/dist/builtin/subagents/src/slash/slash-live-state.ts +59 -32
  172. package/dist/builtin/subagents/src/tui/render-chain-graph.ts +120 -32
  173. package/dist/builtin/subagents/src/tui/render-event-formatting.ts +85 -22
  174. package/dist/builtin/subagents/src/tui/render-helpers.ts +16 -6
  175. package/dist/builtin/subagents/src/tui/render-layout.ts +8 -3
  176. package/dist/builtin/subagents/src/tui/render-result-compact.ts +125 -43
  177. package/dist/builtin/subagents/src/tui/render-result.ts +128 -85
  178. package/dist/builtin/subagents/src/tui/render-stable-output.ts +17 -13
  179. package/dist/builtin/subagents/src/tui/render-status-progress.ts +52 -20
  180. package/dist/builtin/subagents/src/tui/render-widget-graph.ts +130 -28
  181. package/dist/builtin/subagents/src/tui/render-widget.ts +54 -27
  182. package/dist/builtin/subagents/src/tui/render.ts +10 -3
  183. package/dist/builtin/web-access/CHANGELOG.md +6 -0
  184. package/dist/builtin/web-access/package.json +2 -2
  185. package/dist/builtin/workflows/CHANGELOG.md +127 -0
  186. package/dist/builtin/workflows/README.md +83 -70
  187. package/dist/builtin/workflows/ambient.d.ts +0 -5
  188. package/dist/builtin/workflows/builtin/adversarial-verification-prompts.ts +7 -4
  189. package/dist/builtin/workflows/builtin/adversarial-verification-runner.ts +1 -1
  190. package/dist/builtin/workflows/builtin/adversarial-verification.ts +2 -1
  191. package/dist/builtin/workflows/builtin/classify-and-act-prompts.ts +5 -2
  192. package/dist/builtin/workflows/builtin/classify-and-act-runner.ts +5 -7
  193. package/dist/builtin/workflows/builtin/classify-and-act.ts +3 -2
  194. package/dist/builtin/workflows/builtin/fan-out-and-synthesize-prompts.ts +6 -3
  195. package/dist/builtin/workflows/builtin/fan-out-and-synthesize-runner.ts +5 -5
  196. package/dist/builtin/workflows/builtin/fan-out-and-synthesize.ts +3 -2
  197. package/dist/builtin/workflows/builtin/generate-and-filter-prompts.ts +7 -4
  198. package/dist/builtin/workflows/builtin/generate-and-filter-runner.ts +6 -3
  199. package/dist/builtin/workflows/builtin/generate-and-filter.ts +3 -2
  200. package/dist/builtin/workflows/builtin/goal-artifacts.ts +1 -1
  201. package/dist/builtin/workflows/builtin/goal-models.ts +39 -39
  202. package/dist/builtin/workflows/builtin/goal-orchestrator-prompts.ts +94 -0
  203. package/dist/builtin/workflows/builtin/goal-prompts.ts +70 -285
  204. package/dist/builtin/workflows/builtin/goal-reducer.ts +1 -1
  205. package/dist/builtin/workflows/builtin/goal-runner.ts +72 -116
  206. package/dist/builtin/workflows/builtin/goal.ts +12 -11
  207. package/dist/builtin/workflows/builtin/index.d.ts +17 -112
  208. package/dist/builtin/workflows/builtin/index.ts +1 -2
  209. package/dist/builtin/workflows/builtin/loop-until-done-prompts.ts +20 -12
  210. package/dist/builtin/workflows/builtin/loop-until-done-runner.ts +3 -0
  211. package/dist/builtin/workflows/builtin/loop-until-done.ts +3 -2
  212. package/dist/builtin/workflows/builtin/open-claude-design-phases.ts +149 -88
  213. package/dist/builtin/workflows/builtin/open-claude-design-runner.ts +102 -78
  214. package/dist/builtin/workflows/builtin/open-claude-design-setup.ts +164 -56
  215. package/dist/builtin/workflows/builtin/open-claude-design-utils.ts +16 -21
  216. package/dist/builtin/workflows/builtin/open-claude-design.ts +2 -1
  217. package/dist/builtin/workflows/builtin/ralph-core.ts +61 -57
  218. package/dist/builtin/workflows/builtin/ralph-forked-prompts.ts +41 -45
  219. package/dist/builtin/workflows/builtin/ralph-models.ts +37 -47
  220. package/dist/builtin/workflows/builtin/ralph-reviewer-prompt.ts +37 -117
  221. package/dist/builtin/workflows/builtin/ralph-runner.ts +83 -108
  222. package/dist/builtin/workflows/builtin/ralph.ts +6 -5
  223. package/dist/builtin/workflows/builtin/shared-prompts.ts +117 -70
  224. package/dist/builtin/workflows/builtin/steering-context.ts +51 -0
  225. package/dist/builtin/workflows/builtin/tournament-prompts.ts +21 -12
  226. package/dist/builtin/workflows/builtin/tournament-runner.ts +3 -0
  227. package/dist/builtin/workflows/builtin/tournament.ts +3 -2
  228. package/dist/builtin/workflows/package.json +4 -4
  229. package/dist/builtin/workflows/skills/create-spec/SKILL.md +1 -1
  230. package/dist/builtin/workflows/skills/impeccable/SKILL.md +33 -129
  231. package/dist/builtin/workflows/skills/impeccable/agents/impeccable_asset_producer.toml +11 -3
  232. package/dist/builtin/workflows/skills/impeccable/agents/impeccable_documenter.toml +26 -0
  233. package/dist/builtin/workflows/skills/impeccable/agents/impeccable_finish_reviewer.toml +35 -0
  234. package/dist/builtin/workflows/skills/impeccable/reference/android.md +1 -1
  235. package/dist/builtin/workflows/skills/impeccable/reference/animate.md +72 -189
  236. package/dist/builtin/workflows/skills/impeccable/reference/audit.md +10 -9
  237. package/dist/builtin/workflows/skills/impeccable/reference/audit.native.md +2 -2
  238. package/dist/builtin/workflows/skills/impeccable/reference/bolder.md +19 -108
  239. package/dist/builtin/workflows/skills/impeccable/reference/clarify.md +59 -253
  240. package/dist/builtin/workflows/skills/impeccable/reference/colorize.md +51 -222
  241. package/dist/builtin/workflows/skills/impeccable/reference/craft-floor.md +45 -0
  242. package/dist/builtin/workflows/skills/impeccable/reference/craft.md +3 -121
  243. package/dist/builtin/workflows/skills/impeccable/reference/critique.md +28 -20
  244. package/dist/builtin/workflows/skills/impeccable/reference/degraded/asset-producer.md +97 -0
  245. package/dist/builtin/workflows/skills/impeccable/reference/degraded/documenter.md +23 -0
  246. package/dist/builtin/workflows/skills/impeccable/reference/degraded/finish-reviewer.md +32 -0
  247. package/dist/builtin/workflows/skills/impeccable/reference/degraded/manual-edit-applier.md +92 -0
  248. package/dist/builtin/workflows/skills/impeccable/reference/delight.md +47 -279
  249. package/dist/builtin/workflows/skills/impeccable/reference/distill.md +2 -2
  250. package/dist/builtin/workflows/skills/impeccable/reference/doctor.md +53 -0
  251. package/dist/builtin/workflows/skills/impeccable/reference/document.md +60 -73
  252. package/dist/builtin/workflows/skills/impeccable/reference/harden.md +1 -12
  253. package/dist/builtin/workflows/skills/impeccable/reference/hooks.md +23 -12
  254. package/dist/builtin/workflows/skills/impeccable/reference/init.md +64 -163
  255. package/dist/builtin/workflows/skills/impeccable/reference/ios.md +1 -1
  256. package/dist/builtin/workflows/skills/impeccable/reference/layout.md +52 -153
  257. package/dist/builtin/workflows/skills/impeccable/reference/live.md +47 -36
  258. package/dist/builtin/workflows/skills/impeccable/reference/new-work.md +105 -0
  259. package/dist/builtin/workflows/skills/impeccable/reference/{product.md → operate.md} +6 -5
  260. package/dist/builtin/workflows/skills/impeccable/reference/optimize.md +4 -4
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  2326. package/dist/core/oauth-compat.js +0 -2
  2327. package/dist/core/oauth-compat.js.map +0 -1
  2328. package/dist/core/oauth-provider-bridge.d.ts +0 -40
  2329. package/dist/core/oauth-provider-bridge.d.ts.map +0 -1
  2330. package/dist/core/oauth-provider-bridge.js +0 -169
  2331. package/dist/core/oauth-provider-bridge.js.map +0 -1
  2332. package/dist/modes/interactive/components/context-window-selector.d.ts +0 -53
  2333. package/dist/modes/interactive/components/context-window-selector.d.ts.map +0 -1
  2334. package/dist/modes/interactive/components/context-window-selector.js +0 -136
  2335. package/dist/modes/interactive/components/context-window-selector.js.map +0 -1
  2336. package/dist/modes/rpc/bounded-writer.d.ts +0 -27
  2337. package/dist/modes/rpc/bounded-writer.d.ts.map +0 -1
  2338. package/dist/modes/rpc/bounded-writer.js +0 -103
  2339. package/dist/modes/rpc/bounded-writer.js.map +0 -1
@@ -114,6 +114,10 @@ interface Usage {
114
114
  }
115
115
  ```
116
116
 
117
+ The pi-ai `StopReason` type also includes `"pending"`, the reason a message carries while it is still streaming. The terminal event replaces it before the assistant message is written, so `"pending"` does not appear in session JSONL.
118
+
119
+ A process can stop after a `toolUse` assistant message reaches JSONL but before every corresponding `toolResult` is appended. Atomic does not rewrite that append-only history. When the inactive session is reopened, its derived context supplies an error result for each unanswered call before rendering, compaction, or another provider request. The error states that execution was interrupted and its result is unavailable; it does not claim the tool had no side effects. Orphaned and duplicate results are also removed from provider-bound derived context. The original JSONL remains the authoritative record of what was actually persisted.
120
+
117
121
  ### Extended Message Types (from Atomic coding-agent)
118
122
 
119
123
  ```typescript
@@ -224,16 +228,6 @@ Emitted when the user changes the thinking/reasoning level.
224
228
  {"type":"thinking_level_change","id":"e5f6g7h8","parentId":"d4e5f6g7","timestamp":"2024-12-03T14:06:00.000Z","thinkingLevel":"high"}
225
229
  ```
226
230
 
227
- ### ContextWindowChangeEntry
228
-
229
- Emitted when the user selects a supported context-window size for the active model. The value is a token count, independent of thinking/reasoning level. Explicit startup selections are journaled even when they equal the model's scalar default so the user's budget choice survives later settings changes and resume.
230
-
231
- ```json
232
- {"type":"context_window_change","id":"f6g7h8i9","parentId":"e5f6g7h8","timestamp":"2024-12-03T14:07:00.000Z","contextWindow":1000000}
233
- ```
234
-
235
- `buildSessionContext()` replays the latest `context_window_change` on the active branch. In-place tree navigation also applies the branch's replayed context window to the active model without appending another `context_window_change` entry or writing context-window defaults to settings. If a historical value is no longer supported by the current model, session creation/navigation falls back to the model default the same way other context-window restore paths do.
236
-
237
231
  ### CompactionEntry
238
232
 
239
233
  Created by `/compact`, RPC `compact`, and automatic compaction. The `summary` field contains the mechanically reconstructed verbatim transcript string, not generated summary prose. `firstKeptEntryId` is the first context-visible entry retained outside compaction, or `null` when no pre-boundary context-visible message is retained (including `preserve_recent: 0`).
@@ -244,7 +238,7 @@ An entry is active only when `details.strategy` is exactly `"verbatim-lines"`:
244
238
  {"type":"compaction","id":"c1","parentId":"m9","timestamp":"2026-07-13T10:00:00.000Z","summary":"[User]: fix the test\n(filtered 42 lines)\n[Assistant]: Fixed.","firstKeptEntryId":"m7","tokensBefore":51234,"details":{"strategy":"verbatim-lines","promptVersion":3,"rung":"planned","parameters":{"compression_ratio":0.5,"preserve_recent":2,"query":"fix the test"},"stats":{"linesBefore":812,"linesDeleted":417,"linesKept":395,"rangeCount":63,"tokensBefore":51234,"tokensAfter":24980,"percentReduction":51.2}}}
245
239
  ```
246
240
 
247
- On rebuild, Atomic emits the durable `summary` as a synthesized visible custom message, then emits original entries beginning at a string `firstKeptEntryId`. When the field is `null`, it emits no pre-boundary ordinary entries. In both cases, messages appended after the boundary are emitted. This exact state survives resume without rerunning a planner. Existing records with string IDs retain their behavior; `details.rung` is `"planned"` or `"extension"`, and `details.backupPath` is optional.
241
+ On rebuild, Atomic emits one synthesized visible custom message: the durable `summary` with the kept tail—the original entries from a string `firstKeptEntryId` up to the boundary—serialized into the same transcript grammar and concatenated onto its end. Those entries are not re-emitted as separate messages, so a tail that starts or ends mid-turn cannot yield out-of-order provider blocks. The tail keeps full tool-result text and carries retained images as image blocks on the boundary message. When the field is `null`, the boundary carries the `summary` alone. In both cases, messages appended after the boundary are emitted as real messages. This exact state survives resume without rerunning a planner. `details.rung` is `"planned"` or `"extension"`, and `details.backupPath` is optional.
248
242
 
249
243
  Historical `compaction` records without `details.strategy: "verbatim-lines"` are retired summary-compaction records. They remain parseable and visible to audit/export tools but are inert in active LLM context.
250
244
 
@@ -332,7 +326,7 @@ Entries form a tree:
332
326
  `buildSessionContext()` walks the active branch from root to leaf and replays model, thinking-level, and context-window changes. It selects the latest `compaction` entry whose `details.strategy` is `"verbatim-lines"`.
333
327
 
334
328
  - With no active boundary, normal message, custom-message, and branch-summary entries are emitted verbatim.
335
- - With a boundary whose `firstKeptEntryId` is a string, Atomic emits its durable string as a custom-role `customType:"compaction"` message, then original messages from that ID onward, including messages appended after the boundary.
329
+ - With a boundary whose `firstKeptEntryId` is a string, Atomic emits a single custom-role `customType:"compaction"` message whose text is the durable string plus the losslessly serialized kept tail (the entries from that ID up to the boundary, with retained images kept as image blocks on that message), then the messages appended after the boundary.
336
330
  - With `firstKeptEntryId: null`, Atomic emits the boundary and post-boundary messages but no pre-boundary ordinary message.
337
331
  - If a corrupt/foreign boundary's non-null `firstKeptEntryId` is absent, Atomic emits the boundary followed by post-boundary messages rather than resurrecting all older content.
338
332
  - Legacy `context_compaction` entries and non-verbatim `compaction` entries are skipped as inert archival records.
@@ -381,9 +375,6 @@ for (const line of lines) {
381
375
  case "thinking_level_change":
382
376
  console.log(`[${entry.id}] Thinking: ${entry.thinkingLevel}`);
383
377
  break;
384
- case "context_window_change":
385
- console.log(`[${entry.id}] Context window: ${entry.contextWindow}`);
386
- break;
387
378
  }
388
379
  }
389
380
  ```
package/docs/sessions.md CHANGED
@@ -42,7 +42,7 @@ For the JSONL file format and SessionManager API, see [Session Format](/session-
42
42
 
43
43
  `/resume` opens an interactive session picker for the current project. `atomic -r` opens the same picker at startup.
44
44
 
45
- When Atomic reconstructs a resumed session, the latest active verbatim `compaction` entry supplies a durable compacted transcript string followed by the exact original kept tail. A zero-retention boundary stores `firstKeptEntryId: null` and replays no pre-boundary ordinary message. Resume does not rerun a planner or re-derive omissions. Legacy logical-deletion `context_compaction` entries are inert archival records, so previously hidden content can re-enter context in sessions created by older versions.
45
+ When Atomic reconstructs a resumed session, the latest active verbatim `compaction` entry supplies one boundary text message: the durable compacted transcript string with the kept tail serialized and appended to its end rather than replayed as separate message blocks. A zero-retention boundary stores `firstKeptEntryId: null` and replays no pre-boundary ordinary message. Resume does not rerun a planner or re-derive omissions. Legacy logical-deletion `context_compaction` entries are inert archival records, so previously hidden content can re-enter context in sessions created by older versions.
46
46
 
47
47
  In the picker you can:
48
48
 
package/docs/settings.md CHANGED
@@ -36,7 +36,10 @@ Settings and trust JSON files may start with a UTF-8 BOM, as commonly written by
36
36
  | `defaultThinkingLevel` | string | - | `"off"`, `"minimal"`, `"low"`, `"medium"`, `"high"`, `"xhigh"`, `"max"`; the active model must support the selected level |
37
37
  | `hideThinkingBlock` | boolean | `false` | Hide thinking blocks in output |
38
38
  | `thinkingBudgets` | object | - | Custom token budgets per thinking level |
39
- | `fallbackModels` | string[] | - | Ordered main-chat fallback models, written as `"provider/model"` with optional model-supported reasoning suffixes such as `:high`, `:xhigh`, or `:max` |
39
+ | `showCacheMissNotices` | boolean | `false` | Show transcript notices for significant prompt-cache misses and their attributed wasted tokens |
40
+ | `fallbackModels` | string[] | - | Ordered fallback models, written as `"provider/model"` with optional model-supported reasoning suffixes such as `:high`, `:xhigh`, or `:max`. Used by main-chat turns and, since compaction fallback rungs, borrowed for compaction planner requests |
41
+
42
+ `defaultProvider` and `defaultModel` form one exact saved selection when both are present. Atomic waits for built-in, configured, and extension provider registration before classifying that provider. If it remains unsupported, Atomic does not silently switch providers: interactive mode stays live with a generic configuration warning; print and JSON modes write the warning to stderr and exit nonzero before prompting (with JSON stdout remaining JSONL-clean); and RPC rejects `prompt` until a successful explicit `set_model` selects an available model or an explicit model cycle returns a different available model. A null or unchanged cycle does not clear the condition. If the provider is supported but its saved model is unknown or lacks configured authentication, normal automatic selection of an available authenticated model remains enabled; the same is true when either field is omitted. Valid extension-provider defaults can resolve after deferred extension loading. Update an unsupported pair or choose a model with `/model`.
40
43
 
41
44
  #### thinkingBudgets
42
45
 
@@ -53,7 +56,9 @@ Settings and trust JSON files may start with a UTF-8 BOM, as commonly written by
53
56
 
54
57
  #### fallbackModels
55
58
 
56
- `fallbackModels` gives ordinary main-chat turns an ordered model fallback chain. Atomic starts with the selected/default model. If that model exhausts the normal same-model auto-retry loop for a retryable provider/model failure — including rate limits and quota/usage-limit exhaustion such as a provider reporting `The usage limit has been reached` — Atomic switches to the next configured fallback model and continues the same turn. If `retry.enabled` is `false`, Atomic skips same-model retries and moves directly to the next fallback for retryable failures. Non-retryable task failures, cancellations, and context-overflow compaction paths do not trigger model fallback.
59
+ `fallbackModels` gives ordinary main-chat turns an ordered model fallback chain. Atomic starts with the selected/default model. If that model exhausts the normal same-model auto-retry loop for a retryable provider/model failure — including rate limits and quota/usage-limit exhaustion such as a provider reporting `The usage limit has been reached` — Atomic switches to the next configured fallback model and continues the same turn. If `retry.enabled` is `false`, Atomic skips same-model retries and moves directly to the next fallback for retryable failures. Non-retryable task failures and cancellations do not trigger model fallback.
60
+
61
+ The same list is also **borrowed by compaction**. When the compaction range planner cannot produce a usable plan on the current model — a rate limit, quota exhaustion, provider error, context overflow, or an empty plan — Atomic runs one planner request against the next configured candidate, using that candidate's own credentials. **A configured fallback model may therefore receive the compaction transcript.** Borrowing is planner-only: it never changes the session model, thinking level, or model history, it appends no model-change entry, and it emits no fallback status. See [Compaction](/compaction#planning-rungs-and-failure-behavior).
57
62
 
58
63
  Fallback entries should be fully qualified `provider/model` ids. Add a reasoning suffix to a candidate to override the effort for that fallback only; valid suffixes are `:off`, `:minimal`, `:low`, `:medium`, `:high`, `:xhigh`, and `:max`. Atomic clamps or hides levels that the selected model's capability map does not support.
59
64
 
@@ -102,6 +107,8 @@ Use `/fast` in interactive mode to edit these settings. Atomic applies fast mode
102
107
  | `enableInstallTelemetry` | boolean | `true` | Send an anonymous install/update version ping after first install or changelog-detected updates. This does not control update checks |
103
108
  | `firstRunOnboardingStartedVersion` | string | - | Internal first-run onboarding start marker used when no prior Atomic startup state identifies the user as returning |
104
109
  | `onboardedVersion` | string | - | Internal one-time first-run onboarding completion marker. Returning-user detection from prior startup state or displaying the first-run workflow-engine explanation sets it |
110
+ | `enableAnalytics` | boolean | `false` | Opt in to analytics during first-run setup |
111
+ | `trackingId` | string | - | Locally generated analytics identifier when analytics is enabled |
105
112
  | `doubleEscapeAction` | string | `"tree"` | Action for double-escape: `"tree"`, `"fork"`, or `"none"` |
106
113
  | `treeFilterMode` | string | `"default"` | Default filter for `/tree`: `"default"`, `"no-tools"`, `"user-only"`, `"labeled-only"`, `"all"` |
107
114
  | `editorPaddingX` | number | `0` | Horizontal padding for input editor (0-3) |
@@ -110,12 +117,27 @@ Use `/fast` in interactive mode to edit these settings. Atomic applies fast mode
110
117
  | `autocompleteMaxVisible` | number | `5` | Max visible items in autocomplete dropdown (3-20) |
111
118
  | `showHardwareCursor` | boolean | `false` | Show the terminal cursor while TUI positions it for IME support |
112
119
 
120
+ Ctrl+G in main chat, embedded chat, and extension editor dialogs uses one shared asynchronous launcher. Atomic chooses `externalEditor`, then `$VISUAL`, then `$EDITOR`, then Notepad on Windows or `nano` elsewhere. Each edit uses a private `atomic-editor-*` directory containing only `prompt.md`, removes the directory recursively afterward, and never scans the system temporary directory. A successful empty edit is preserved; a failed editor leaves the original text unchanged, and the TUI always restarts and renders after the editor exits.
121
+
113
122
  ### Telemetry and update checks
114
123
 
115
124
  `enableInstallTelemetry` only controls the anonymous install/update ping to `https://pi.dev/api/report-install`. Opting out of telemetry does not disable update checks; Atomic can still fetch the npm registry latest package metadata at `https://registry.npmjs.org/@bastani/atomic/latest` to look for the latest version.
116
125
 
117
126
  Set `ATOMIC_SKIP_VERSION_CHECK=1` to disable the Atomic version update check. Use `--offline` or `ATOMIC_OFFLINE=1` to disable all startup network operations described here, including update checks, package update checks, and install/update telemetry. Legacy `PI_*` aliases are also supported for app-specific environment variables.
118
127
 
128
+
129
+ On a genuine first run, Atomic previews available themes and asks whether to opt into analytics. The choice and locally generated identifier are stored as `enableAnalytics` and `trackingId`; analytics remains off unless explicitly enabled.
130
+
131
+ ### Network proxy
132
+
133
+ | Setting | Type | Default | Description |
134
+ |---------|------|---------|-------------|
135
+ | `httpProxy` | string | - | HTTP proxy URL applied as `HTTP_PROXY` and `HTTPS_PROXY`. Global setting only. |
136
+
137
+ ```json
138
+ { "httpProxy": "http://127.0.0.1:7890" }
139
+ ```
140
+
119
141
  ### Warnings
120
142
 
121
143
  | Setting | Type | Default | Description |
@@ -195,7 +217,7 @@ When a provider requests a retry delay longer than `retry.provider.maxRetryDelay
195
217
 
196
218
  | Setting | Type | Default | Description |
197
219
  |---------|------|---------|-------------|
198
- | `httpIdleTimeoutMs` | number | `600000` | HTTP header/body idle timeout in milliseconds. Must be a non-negative finite number; decimals are rounded down. Set to `0` to disable the idle timeout. |
220
+ | `httpIdleTimeoutMs` | number or string | `600000` | HTTP idle timeout as milliseconds, a duration such as `"30s"`, `"5m"`, or `"1h"`, or `"disabled"`. `0` also disables it. |
199
221
 
200
222
  Atomic applies this timeout to the global HTTP dispatcher used by `fetch` and provider SDK HTTP clients. The default is 600,000 ms (10 minutes), which keeps slow long-context requests working while reclaiming stale idle connections. Atomic does not impose a separate fixed connect-phase timeout; connection failures surface through the provider and agent retry/error paths.
201
223
 
@@ -208,7 +230,7 @@ The `/settings` picker offers these presets:
208
230
  | `5 min` | `300000` |
209
231
  | `10 min` | `600000` |
210
232
  | `30 min` | `1800000` |
211
- | `Disabled` | `0` |
233
+ | `Disabled` | `"disabled"` (or `0`) |
212
234
 
213
235
  ```json
214
236
  {
@@ -223,7 +245,7 @@ The `/settings` picker offers these presets:
223
245
  | `steeringMode` | string | `"one-at-a-time"` | How steering messages are sent: `"all"` or `"one-at-a-time"` |
224
246
  | `followUpMode` | string | `"one-at-a-time"` | How follow-up messages are sent: `"all"` or `"one-at-a-time"` |
225
247
  | `transport` | string | `"auto"` | Preferred transport for providers that support multiple transports: `"sse"`, `"websocket"`, `"websocket-cached"`, or `"auto"` |
226
- | `httpIdleTimeoutMs` | number | `600000` | HTTP header/body idle timeout in milliseconds, also used by providers with explicit stream idle timeouts. Set to `0` to disable. |
248
+ | `httpIdleTimeoutMs` | number or string | `600000` | HTTP idle timeout in milliseconds, a duration string, or `"disabled"`; also used by providers with explicit stream idle timeouts. |
227
249
  | `websocketConnectTimeoutMs` | number | `15000` | WebSocket connect/open handshake timeout in milliseconds for providers that support WebSocket transports. Set to `0` to disable. |
228
250
 
229
251
  ### Terminal & Images
@@ -276,25 +298,15 @@ When multiple sources specify a session directory, precedence is `--session-dir`
276
298
  | Setting | Type | Default | Description |
277
299
  |---------|------|---------|-------------|
278
300
  | `enabledModels` | string[] | - | Model patterns for CTRL+P cycling (same format as `--models` CLI flag). In interactive TTY startup, these patterns are resolved again after deferred extension/resource loading so extension-provided providers can match without blocking first paint. |
279
- | `defaultContextWindow` | number \| string | model default | Optional global fallback context window for models that expose selectable context windows. Accepts raw token counts or compact labels such as `400k` and `1m`. Unsupported values are ignored for models that do not support them. |
280
- | `defaultContextWindows` | object | `{}` | Per-model preferred context windows keyed as `provider/modelId`. The interactive `/model` context picker writes this setting so a Copilot-specific prompt cap such as `936k` does not leak into Anthropic, Cursor, or other providers. |
281
301
 
282
302
  ```json
283
303
  {
284
304
  "enabledModels": ["claude-*", "gpt-4o", "gemini-2*"],
285
- "fallbackModels": ["anthropic/claude-opus-4-8:xhigh", "github-copilot/gpt-5.5:high"],
286
- "defaultContextWindow": "1m",
287
- "defaultContextWindows": {
288
- "github-copilot/claude-opus-4.8": "936k",
289
- "github-copilot/claude-sonnet-5": "936k",
290
- "github-copilot/gpt-5.5": "922k"
291
- }
305
+ "fallbackModels": ["anthropic/claude-opus-4-8:xhigh", "github-copilot/gpt-5.5:high"]
292
306
  }
293
307
  ```
294
308
 
295
- Context-window settings are independent of `defaultThinkingLevel`: selecting a larger context window does not change reasoning effort. Interactive users can change the active model's budget through the `/model` selection flow, which prompts for a context window whenever the chosen model supports more than one window and persists the effective selection under `defaultContextWindows["provider/modelId"]`. Atomic treats `defaultContextWindow` as a broad fallback only: if the active model does not support that value, the model's own default is used without a startup warning; targeted `defaultContextWindows` entries still warn when they become unsupported for their exact model. Larger provider context windows can carry higher usage cost. For catalog-advertised GitHub Copilot long-context models (including dynamically populated plain catalog ids such as `github-copilot/claude-sonnet-5`, while namespaced enterprise deployment ids containing `/` are skipped), selecting `1m` raises Atomic's local prompt budget to the largest advertised long-context tier at or below that rounded request (for example `922k` or `936k`) and sends `X-GitHub-Api-Version: 2026-06-01`; GitHub then applies the long-context tier server-side by prompt token count. That tier consumes more Copilot AI credits and requires Copilot long-context/usage-based billing entitlement, otherwise requests over the server cap are rejected with a friendly hint. Custom providers and explicit model overrides can still declare their own selectable `contextWindowOptions`.
296
-
297
- `fallbackModels` is independent of both context-window defaults and `enabledModels`: it is consulted only after a retryable main-chat provider/model failure, and each fallback candidate applies its own model-specific context-window defaults when selected.
309
+ `fallbackModels` is independent of `enabledModels`: it is consulted only after a retryable main-chat provider/model failure or a terminal compaction planner outcome.
298
310
 
299
311
  ### Markdown
300
312
 
@@ -354,7 +366,6 @@ See [Atomic packages](/packages) for package management details.
354
366
  "defaultProvider": "anthropic",
355
367
  "defaultModel": "claude-sonnet-4-20250514",
356
368
  "defaultThinkingLevel": "medium",
357
- "defaultContextWindow": "400k",
358
369
  "theme": "dark",
359
370
  "compaction": {
360
371
  "enabled": true,
package/docs/skills.md CHANGED
@@ -70,6 +70,12 @@ For project-level Claude Code skills, add to `.atomic/settings.json` (legacy `.p
70
70
 
71
71
  This is progressive disclosure: only descriptions are always in context, full instructions load on-demand.
72
72
 
73
+ ### Built-in prompt engineering guidance
74
+
75
+ The bundled `/skill:prompt-engineer` creates, optimizes, evaluates, and troubleshoots prompts for GPT-5.6, Claude Opus 5, and Claude Fable 5. It teaches a delete-first workflow: preserve outcomes, safety, permissions, evidence, output, and stopping contracts while removing repetition, generic self-checks, and obsolete process scaffolding. For autonomous prompts it recommends a compact `Role · Goal · Success criteria · Constraints · Tools · Output · Stop rules` shape, context-dependent tool routing, explicit effort and response-length controls, restrained delegation, grounded progress claims, and documents-first/query-last ordering for long inputs.
76
+
77
+ The skill no longer recommends response prefilling, which returns an error on Claude 4.6 and later, or visible chain-of-thought as a primary technique. Use explicit output instructions, schemas, tools, or post-processing instead of prefilling. Request conclusions, citations, commands, and observed results rather than reconstructed private reasoning; such requests can trigger Claude Fable 5's `reasoning_extraction` safeguard and force a model fallback.
78
+
73
79
  ## Skill Commands
74
80
 
75
81
  Skills register as `/skill:name` commands:
@@ -134,6 +140,8 @@ Use relative file paths from the skill directory (these are bundled skill files,
134
140
  See the API reference at `references/api-reference.md` for details.
135
141
  ```
136
142
 
143
+ Keep authored instructions outcome-first and concise. State observable completion and stop conditions, give a short reason for material constraints, and use decision rules for judgment calls instead of `ALWAYS`/`NEVER` language. Put detailed or model-specific material in `references/` so it loads only when needed. Do not ask models to reproduce private reasoning or repeatedly verify their own work; require evidence or validation results where correctness matters.
144
+
137
145
  ## Frontmatter
138
146
 
139
147
  Per the [Agent Skills specification](https://agentskills.io/specification#frontmatter-required):
package/docs/subagents.md CHANGED
@@ -68,11 +68,12 @@ Atomic currently bundles these agents from `@bastani/subagents`:
68
68
  | `codebase-pattern-finder` | Find similar implementations, conventions, and test examples to model after. | No |
69
69
  | `codebase-research-locator` | Locate prior `research/` and `specs/` documents related to the task. | No |
70
70
  | `codebase-research-analyzer` | Extract decisions, constraints, and still-relevant conclusions from prior local docs. | No |
71
- | `codebase-online-researcher` | Research official docs, ecosystem behavior, and open-source source references online. | Can write research notes |
72
- | `debugger` | Reproduce, diagnose, and fix failures or unexpected behavior. | Yes |
73
- | `code-simplifier` | Clean up recently changed code while preserving behavior. | Yes |
71
+ | `codebase-online-researcher` | Research official docs, ecosystem behavior, and open-source source references online; it may persist reusable research notes. | Research notes only |
72
+ | `debugger` | Reproduce a concrete failure, prove its root cause, apply the smallest in-scope fix, and rerun the failing scenario. | Yes |
73
+ | `code-simplifier` | Simplify recently changed code under its behavior-preservation “doors” rubric. | Yes |
74
+ | `worker` | Implement an approved task or handoff, validate the narrow change, and escalate product, architecture, or scope decisions to its supervisor. | Yes |
74
75
 
75
- Read-oriented agents should inspect and report. `debugger` and `code-simplifier` can edit files, so run them with an explicit scope and validation target.
76
+ The bundled definitions keep their routing and model frontmatter but use compact, outcome-first bodies: role and goal, success criteria, constraints and tool routes, output contract, and stop rules where applicable. Report-producing agents ground progress claims in tool results and return concise evidence rather than narrating internal reasoning. Read-oriented agents inspect and report. `debugger`, `code-simplifier`, and `worker` can edit files, so give them an explicit scope and validation target. The debugger should finish an in-scope diagnosis by applying and validating the fix, not stop at a proposed patch.
76
77
 
77
78
  ## Review compositions
78
79
 
@@ -94,7 +95,7 @@ Example request:
94
95
  Review the current diff with fresh-context specialists: analyze correctness, inspect failure modes without editing, and compare the implementation to existing patterns. Synthesize only issues worth fixing now.
95
96
  ```
96
97
 
97
- Useful prompt templates include `/parallel-review`, `/review-loop`, `/parallel-research`, `/parallel-context-build`, `/parallel-handoff-plan`, and `/parallel-cleanup`. Treat them as reusable compositions, not as separate bundled agent names.
98
+ Useful prompt templates include `/parallel-review`, `/review-loop`, `/parallel-research`, `/parallel-context-build`, `/parallel-handoff-plan`, and `/parallel-cleanup`. Treat them as reusable compositions, not as separate bundled agent names. Their task templates define the requested outcome, evidence and delegation boundaries, downstream output shape, and an explicit stop rule; preserve those contracts when adapting a template.
98
99
 
99
100
  ## Background work and control
100
101
 
@@ -133,6 +134,14 @@ Inside workflow stages, completion delivery observes the stage generation bounda
133
134
 
134
135
  When a workflow graph overlay is open, Atomic also publishes the live async subagent summary into the shared status surface. The below-editor async widget remains available when the workflow overlay is hidden, and the overlay statusline keeps the run count/state visible while the graph fills the terminal.
135
136
 
137
+ ## Orchestrator model and group policy
138
+
139
+ Atomic applies the same delegation policy to any parent chat or workflow stage that orchestrates subagents. A named agent uses the model and fallback chain declared by its agent definition, so the orchestrator normally omits the subagent tool's explicit `model` argument. An override needs either the user's exact model request or a documented task-specific reason recorded before launch; model diversity alone is not enough.
140
+
141
+ If an agent declares no model or fallback policy, the orchestrator consults the role guidance in [Model selection](/models/model-selection), then calls `workflow({ action: "models" })` when that tool is available. It may pin only a returned `fullId` and may add a thinking suffix only when the model entry lists that level. When the catalog tool is unavailable, the catalog is empty, or no recommended model is present, the child stays unpinned and the orchestrator reports the limit instead of inventing a model or inspecting credentials.
142
+
143
+ Each workflow invocation automatically receives one stable, non-`"default"` Intercom group. Its stages and delegated children inherit that group across single, parallel, chain, async, and follow-up work unless a call explicitly overrides `group`. Outside workflows, children inherit the launching session's group. This isolates workflow runs from unrelated runs and the main chat while `contact_supervisor` retains its authorized cross-group route.
144
+
136
145
  ## Context and execution modes
137
146
 
138
147
  Subagents can run with fresh or forked context:
@@ -148,7 +157,7 @@ Fresh child processes use normal Atomic package discovery when an agent omits `e
148
157
 
149
158
  Top-level parallel calls support up to 50 subagents after expanding each task's optional `count`. The extension's `parallel.maxTasks` setting defaults to 50 and can enforce a lower task limit; `parallel.concurrency` independently controls how many of those children run at once.
150
159
 
151
- Subagent tasks, parallel/chain items, and the top-level call accept a `group` field that sets the spawned child's [Intercom](/intercom) home group, so same-group subagents can intercom each other while staying isolated from other groups. A named string joins that group; `true` auto-generates one shared UUID group per parallel set (shared across all items in that set). Precedence is `explicit subagent group > inherited current-session (stage) group > env ATOMIC_INTERCOM_GROUP > config > "default"`. When a subagent does not specify a group, it **inherits the launching session's group** read race-safely from the session, not from global env so subagents spawned by a grouped workflow stage automatically join that stage's group and can coordinate with the stage and its sibling subagents. The child intercom group is applied only when the child actually has intercom access (the peer `intercom` tool or the subagent-only `contact_supervisor` tool); a child without intercom is never placed into a group. `contact_supervisor` still reaches the supervisor across group boundaries because Atomic requests a broker capability before spawn and binds the child's registration to the issuing supervisor. Foreground and single-child paths use exact child scopes; asynchronous chains use bounded per-child slots so indexes shifted by dynamic fanout remain valid. Capability environment values are explicitly cleared for descendants without a fresh grant, and parent-held grants are restored after reconnects. The lightweight Intercom wrapper lazy-loads the authorization provider; provider failures propagate and abort launch, while hosts without a provider omit supervisor metadata instead of exposing a broken `contact_supervisor` channel.
160
+ Subagent tasks, parallel/chain items, and the top-level call accept a `group` field that sets the spawned child's [Intercom](/intercom) home group, so same-group subagents can intercom each other while staying isolated from other groups. A named string joins that group; `true` auto-generates one shared UUID group per parallel set. Precedence is `explicit subagent group > inherited current-session group > env ATOMIC_INTERCOM_GROUP > config > "default"`. Workflow stages already carry their runtime-owned invocation group, so children launched without `group` automatically join the workflow group; callers do not need to copy or generate an ID. In other sessions, omission inherits that launching session's resolved group. The child group is applied only when the child has Intercom access (the peer `intercom` tool or subagent-only `contact_supervisor` tool); a child without Intercom receives no group. `contact_supervisor` still reaches the supervisor across group boundaries because Atomic requests a broker capability before spawn and binds the child's registration to the issuing supervisor. Foreground and single-child paths use exact child scopes; asynchronous chains use bounded per-child slots so indexes shifted by dynamic fanout remain valid. Capability environment values are cleared for descendants without a fresh grant, and parent-held grants are restored after reconnects. The lightweight Intercom wrapper lazy-loads the authorization provider; provider failures abort launch, while hosts without a provider omit supervisor metadata instead of exposing a broken channel.
152
161
 
153
162
  When a subagent call, parallel task, chain step, or background run uses a `cwd`, Atomic validates that working directory before starting the child runtime. Missing or non-directory paths are reported as `cwd` problems instead of lower-level process-spawn errors, so failures point at the requested child workspace rather than at the runtime binary.
154
163
 
@@ -175,7 +184,7 @@ This keeps the parent session responsible for orchestration unless you deliberat
175
184
 
176
185
  ## Custom agents
177
186
 
178
- Custom agents are Markdown files with YAML frontmatter and a system prompt body. Common locations are:
187
+ Custom agents are Markdown files with YAML frontmatter and a system prompt body. Keep the body outcome-first and locally complete: state the role or goal, observable success criteria, constraints and context-dependent tool routes, required output shape, and stop conditions. Reserve absolute wording for true invariants, request evidence and conclusions rather than private reasoning, and avoid repeated self-check instructions. Common locations are:
179
188
 
180
189
  | Scope | Path |
181
190
  |---|---|
@@ -194,7 +203,14 @@ fallbackModels: openai/gpt-5-mini
194
203
  inheritProjectContext: true
195
204
  ---
196
205
 
197
- You are a read-only inspector. Inspect the current diff, cite evidence with file paths, and return only issues worth fixing now. Do not edit files.
206
+ ## Role and goal
207
+ Inspect the current diff for correctness and regressions without editing files.
208
+
209
+ ## Success criteria
210
+ Cite each actionable issue with file:line evidence and the observed failure or risk.
211
+
212
+ ## Output and stop rule
213
+ Return only issues worth fixing now. Stop when the relevant diff and affected call paths have been inspected, or name the evidence you could not access.
198
214
  ```
199
215
 
200
216
  If an agent or chain step uses an explicit empty `tools: []` allowlist together with `outputSchema`, Atomic starts the child with only `structured_output` enabled for the required final answer. It does not omit `--tools` and accidentally restore default tools. Path-only tool entries remain extension paths and do not create a builtin allowlist by themselves. The child prompt-runtime extension is loaded before user/tool extensions so its schema-backed `structured_output` tool is registered before explicit allowlists are applied.
package/docs/themes.md CHANGED
@@ -135,13 +135,22 @@ vim ~/.atomic/agent/themes/my-theme.json
135
135
  "muted": "gray",
136
136
  "text": "",
137
137
  ...
138
+ },
139
+ "workingIndicator": {
140
+ "dark": "#70759f",
141
+ "lift": "#7f849c",
142
+ "muted": "#789bd0",
143
+ "accent": "blue",
144
+ "bright": "#b8d2ff",
145
+ "peak": "#eef4ff"
138
146
  }
139
147
  }
140
148
  ```
141
149
 
142
150
  - `name` is required, must be unique, and must not contain `/`.
143
- - `vars` is optional. Define reusable colors here, then reference them in `colors`.
151
+ - `vars` is optional. Define reusable colors here, then reference them in `colors` or `workingIndicator`.
144
152
  - `colors` must define all 51 required tokens.
153
+ - `workingIndicator` is optional and may override any subset of the six tones in the outward half of the ordinary `∀` ramp; Atomic derives omitted tones from selected background, accent, and text roles, then mirrors the palette back after `peak`. Explicit numeric values from 0 through 255 remain exact terminal palette indices. When a numeric index from 0 through 15 seeds an omitted tone, Atomic mixes from its built-in approximation of the common ANSI RGB value; the terminal still controls the actual appearance of the explicit index. Both explicit and derived tones update on theme hot reload.
145
154
 
146
155
  The `$schema` field enables editor auto-completion and validation.
147
156
 
package/docs/tui.md CHANGED
@@ -501,10 +501,13 @@ interface MyTheme {
501
501
 
502
502
  ## Debug logging
503
503
 
504
- Set `ATOMIC_TUI_WRITE_LOG` to capture the raw ANSI stream written to stdout.
504
+ Set `PI_TUI_WRITE_LOG` to capture the raw ANSI stream written to stdout. The
505
+ variable is read by the vendored `@earendil-works/pi-tui` terminal, so it keeps
506
+ its upstream name; a directory path writes one `tui-<timestamp>-<pid>.log` file
507
+ per process.
505
508
 
506
509
  ```bash
507
- ATOMIC_TUI_WRITE_LOG=/tmp/tui-ansi.log atomic
510
+ PI_TUI_WRITE_LOG=/tmp/tui-ansi.log atomic
508
511
  ```
509
512
 
510
513
  Atomic vendors TUI components through the installed `@earendil-works/pi-tui` dependency.
@@ -795,7 +798,7 @@ ctx.ui.setStatus("my-ext", undefined);
795
798
 
796
799
  ### Pattern 4b: Working Indicator Customization
797
800
 
798
- Customize the inline working indicator shown while Atomic is streaming a response.
801
+ Customize the inline Working indicator shown from accepted interactive prompt submission through the active agent turn.
799
802
 
800
803
  ```typescript
801
804
  // Static indicator
@@ -815,11 +818,13 @@ ctx.ui.setWorkingIndicator({
815
818
  // Hide the indicator entirely
816
819
  ctx.ui.setWorkingIndicator({ frames: [] });
817
820
 
818
- // Restore Atomic's default spinner
821
+ // Restore Atomic's default one-cell identity pulse
819
822
  ctx.ui.setWorkingIndicator();
820
823
  ```
821
824
 
822
- This only affects the normal streaming working indicator. Compaction and retry loaders keep their built-in styling. During successful post-tool autocompaction, Atomic temporarily replaces the working indicator with the compaction loader and restores the working indicator before the same stream continues; no additional user input is required. Custom frames are rendered verbatim, so extensions must add their own colors when needed.
825
+ This affects the normal Working indicator from accepted prompt submission through response streaming. Working appears immediately during attachment and other pre-stream startup, then continues without a visible gap when the agent turn begins. A no-turn result, prompt failure, or turn completion removes it. An accepted manual retry clears stale status from the prior prompt before showing new pre-stream activity. Factual automatic retry and fallback status takes precedence while that transition is active; ordinary Working resumes only when a later Working lifecycle actually starts. With no extension override, Atomic renders the exact one-cell `∀` immediately before one of its 453 original randomized whimsical working verbs, selected once per turn. Every agent and SDK turn starts at regular weight with a fresh lifecycle-relative 88ms cadence, then follows a ten-frame, theme-aware dark → accent → bright/bold → accent → dark luminance ramp without changing glyph or geometry. Optional theme tone overrides control any desired phases exactly, including terminal palette indices 0–255; Atomic derives omitted tones from selected-surface, `accent`, and `text` roles. Dark, light, custom, and dynamically reloaded themes therefore retain their own palette. Under `NO_COLOR`, the same cadence remains visible through regular/bold weight without foreground-color escapes. Turn completion and terminal cleanup stop the timer cleanly. Restoring Atomic's default after an extension override also restarts at the dark regular phase; custom extension frames and intervals remain unchanged and render verbatim. `ATOMIC_REDUCED_MOTION=1` shows a static regular accent `∀` without an animation timer. The icon and longest message fit standard and 64-column widths. Factual status copy takes precedence. Compaction and retry loaders keep their plain built-in styling. During successful post-tool autocompaction, Atomic temporarily replaces the Working indicator with the compaction loader and restores it before the same stream continues; no additional user input is required.
826
+
827
+ Post-tool autocompaction is more precisely delimited by its own event pair. Pi opens the follow-up turn while the compaction is still unmatched, so the compaction status — not a generic Working message — owns the status surface from `compaction_start` until `compaction_end`, and the interposed turn does not take it back early. The status paints as soon as the compaction starts rather than on the next animation frame, in the main chat and in an attached workflow-stage chat alike. Ordinary Working then resumes for the continuing stream on any successful mid-turn completion, including a compaction that found nothing to compact and therefore reports no result. A cancelled or failed compaction stops all activity instead. The main chat reports automatic cancellation; an attached workflow-stage chat clears the transient status because the abort event carries no error text. Failures retain their event-provided error text.
823
828
 
824
829
  **Examples:** [working-indicator.ts](https://github.com/bastani-inc/atomic/blob/main/packages/coding-agent/examples/extensions/working-indicator.ts)
825
830
 
@@ -871,6 +876,8 @@ ctx.ui.setFooter((tui, theme, footerData) => ({
871
876
  ctx.ui.setFooter(undefined); // restore default
872
877
  ```
873
878
 
879
+ `ctx.ui.getFooterDataProvider()` exposes the same read-only provider to embedded extension UIs. In isolated interactive mode Atomic maintains the provider inside the engine session, mirrors every `setStatus()` update into it, and uses the session cwd with the same cached Git-branch watcher, so synchronous renderers can read current status and branch data without an RPC round trip or per-render Git process.
880
+
874
881
  Token stats available via `ctx.sessionManager.getBranch()` and `ctx.model`.
875
882
 
876
883
  **Examples:** [custom-footer.ts](https://github.com/bastani-inc/atomic/blob/main/packages/coding-agent/examples/extensions/custom-footer.ts)
@@ -934,9 +941,9 @@ class VimEditor extends CustomEditor {
934
941
 
935
942
  export default function (pi: ExtensionAPI) {
936
943
  pi.on("session_start", (_event, ctx) => {
937
- // Factory receives theme and keybindings from the app
944
+ // Factory receives the TUI, theme, and keybindings from the app
938
945
  ctx.ui.setEditorComponent((tui, theme, keybindings) =>
939
- new VimEditor(theme, keybindings)
946
+ new VimEditor(tui, theme, keybindings)
940
947
  );
941
948
  });
942
949
  }
package/docs/usage.md CHANGED
@@ -15,6 +15,12 @@ The interface has four main areas:
15
15
 
16
16
  The editor can be replaced temporarily by built-in UI such as `/settings` or by custom extension UI.
17
17
 
18
+ ### Startup and Working Identity
19
+
20
+ On an interactive TTY, the startup ∀ assembles from two separated halves in whole-column steps, lands its shadow and session identity, then reveals the one-time manifesto beat. Any key—including Ctrl+C—completes the sequence immediately before normal input routing continues. Terminals narrower than the mark show compact textual identity throughout assembly instead of a blank startup area. Quiet startup suppresses the sequence; a mounted interactive UI without a TTY, or with `ATOMIC_REDUCED_MOTION=1`, starts in the complete settled state. `NO_COLOR` suppresses foreground color across the mark, metadata, and manifesto while retaining weight emphasis.
21
+
22
+ While ordinary agent work is active, the exact one-cell `∀` remains visible and follows a pronounced ten-frame dark → accent → bright/bold → accent → dark luminance ramp at an 88ms cadence. Optional theme tone overrides control any terminal-supported foreground phase exactly, including palette indices 0–255; Atomic derives omitted tones from selected-surface, `accent`, and `text` roles. Dark, light, custom, and dynamically reloaded themes therefore remain correct without changing glyph shape or geometry. It occupies the same inline, one-row footprint as the standard spinner: one glyph immediately before the existing text. Main and workflow-stage chat preserve all 453 of Atomic's original randomized whimsical working verbs, selecting one message per turn; even the longest fits the tested 64-column surface. Every agent and SDK turn resets to the dark regular phase with a fresh lifecycle-relative cadence, while turn, terminal, error, replacement, and disposal paths stop the active timer cleanly. Restoring the ordinary indicator after an extension override also resets its phase and cadence; extension-provided frames and intervals remain unchanged and render verbatim. Under `NO_COLOR`, regular/bold weight preserves visible activity without foreground-color escapes. With `ATOMIC_REDUCED_MOTION=1`, `∀` remains static, regular, and accent-colored without an animation timer. Factual retry, fallback, error, cancellation, and compaction status suppresses the thematic indicator, while blocker and human-approval/prompt surfaces hide ordinary work chrome and factual receipts remain verbatim.
23
+
18
24
  ### Editor Features
19
25
 
20
26
  | Feature | How |
@@ -64,8 +70,10 @@ You can submit messages while the agent is still working:
64
70
 
65
71
  - **Enter** queues a steering message, delivered after the current assistant turn finishes executing its tool calls.
66
72
  - **ALT+Enter** queues a follow-up message, delivered after the agent finishes all work.
67
- - **Escape** or **Ctrl+C** aborts the running agent and restores queued messages to the editor. When idle, Ctrl+C clears the editor (press twice to exit).
68
- - **ALT+Up** retrieves queued messages back to the editor.
73
+ - **Escape** or **Ctrl+C** aborts active/queued work and pauses queued messages in place. They remain queued, in their original per-queue order, until you submit the next ordinary chat message; that submission resumes the chat and makes each queued item eligible once. After the abort settles, a later idle Ctrl+C clears the editor without releasing the hold, and a second quick idle press exits.
74
+ - **ALT+Up** explicitly retrieves queued messages back to the editor without resuming them. Even when retrieval empties the queue, the pause remains active until the next ordinary submission.
75
+
76
+ Both abort routes are cooperative: they ask the agent to stop and wait for it — Escape waits as long as the agent needs — and never terminate the engine that runs your tools. Ctrl+C additionally acts as an escape hatch: it always reaches Atomic when an extension's custom UI has taken over the screen — closing that UI if it does not handle the key itself — and it replaces the engine when it stops answering entirely, including a replacement that hangs before it finishes starting or one that failed to start. A message that could not be sent comes back to the editor rather than being lost: exactly as you typed it, with pasted content intact, placed above anything you typed while the send was pending and separated by a blank line, together with anything still queued behind it in the order you entered it. Atomic does not also show a red error for it. See [Keybindings](/keybindings#application).
69
77
 
70
78
  On Windows Terminal, ALT+Enter is fullscreen by default. Remap it as described in [Terminal setup](/terminal-setup) if you want Atomic to receive the shortcut.
71
79
 
@@ -109,6 +117,15 @@ Use context files for project conventions, commands, safety rules, and preferenc
109
117
 
110
118
  ### System Prompt Files
111
119
 
120
+ Atomic's default `Guidelines` section applies Orwell's six writing rules to every standard session:
121
+
122
+ 1. Never use a familiar printed metaphor, simile, or figure of speech.
123
+ 2. Never use a long word where a short one will do.
124
+ 3. Cut every word that can be cut.
125
+ 4. Use active rather than passive voice where possible.
126
+ 5. Prefer everyday English to foreign phrases, scientific terms, and jargon.
127
+ 6. Break any rule rather than say anything outright barbarous.
128
+
112
129
  Replace the default system prompt with:
113
130
 
114
131
  - `.atomic/SYSTEM.md` for a project
@@ -130,6 +147,12 @@ Treat exported and shared sessions as sensitive: transcripts can contain source
130
147
  atomic [options] [@files...] [messages...]
131
148
  ```
132
149
 
150
+ Use `--` to end option parsing when positional prompt text begins with `-`, `--`, or `@`. Every argument after the terminator is treated as literal message text rather than an option or file argument:
151
+
152
+ ```bash
153
+ atomic --print -- "- leading-dash prompt"
154
+ ```
155
+
133
156
  ### Package Commands
134
157
 
135
158
  ```bash
@@ -150,6 +173,38 @@ These commands manage Atomic packages and `atomic update` can update the Atomic
150
173
 
151
174
  See [Atomic Packages](/packages) for package sources and security notes.
152
175
 
176
+ ### Credential Commands
177
+
178
+ ```bash
179
+ atomic auth print-api-key --model <model> [--provider <p>]
180
+ atomic auth print-bearer-token --model <model> [--provider <p>] [--min-expiry <dur>]
181
+ ```
182
+
183
+ Print one configured credential for an external client — a proxy, a script, or another tool that needs the same key Atomic already holds. The credential goes to **stdout and nothing else**; warnings, provider selection, refresh notices, and help all go to stderr, so `KEY=$(atomic auth print-api-key --model gpt-5.5)` can never capture a diagnostic.
184
+
185
+ `--model` is required. There is no ambient "current model", so the command cannot emit a credential you did not name. When several configured providers offer the model, pass `--provider` to choose one. `--provider` and `--model` are the only options either subcommand accepts: any other flag — including `--export`, `--session-dir`, `--print`, and `--help` — is a usage error rather than a flag this path happens to ignore.
186
+
187
+ `atomic auth` on its own — and `atomic auth help`, `--help`, or `-h` — prints this usage on stderr and exits `0`. Any other subcommand exits `1` and names the two valid ones. Help never uses stdout, so stdout from this command family is a credential or empty.
188
+
189
+ `print-bearer-token` works only on OAuth providers and `print-api-key` only on API-key providers; asking for the wrong kind is an error rather than a silent fallback. A bearer token with less than `--min-expiry` remaining (default `30m`, accepting `ms`, `s`, `m`, or `h`) is refreshed first. Both `--min-expiry 30m` and `--min-expiry=30m` are accepted. `--min-expiry` with `print-api-key` is a usage error — an API key has no expiry. A failed refresh leaves your stored credential untouched.
190
+
191
+ | Exit | Meaning |
192
+ |------|---------|
193
+ | `0` | Credential written to stdout, one trailing newline |
194
+ | `1` | Usage error |
195
+ | `2` | No credential configured for that model/provider |
196
+ | `3` | Several configured providers match — pass `--provider` |
197
+ | `4` | That credential kind is unsupported for the provider |
198
+ | `5` | OAuth refresh failed; the stored credential is unchanged |
199
+ | `6` | The provider cannot mint a token that lives as long as `--min-expiry` |
200
+ | `7` | The provider's OAuth credential could not be used — no claim is made about the stored credential |
201
+ | `8` | The credential could not be written; nothing was emitted |
202
+ | `9` | Only part of the credential was written; discard the output |
203
+
204
+ Exit `5` is reported only for a refresh that itself failed, which happens before anything is persisted; that is the only exit that promises your stored credential is untouched. Any other OAuth failure exits `7` and makes no such promise.
205
+
206
+ Stdout is empty on every non-zero exit but one. Once the credential reaches stdout the command has succeeded: if the stream then fails to drain — a reader that closed the pipe, for example — that is reported on stderr and the exit code stays `0`, because a non-zero exit here would contradict the bytes the caller already holds. The exception is exit `9`, which reports that only part of the credential was written before the stream failed; those bytes cannot be recalled, so stdout is not empty, and the output is a fragment to discard rather than a credential to use. See [Security](/security#credential-export) before wiring this into a script.
207
+
153
208
  ### Modes
154
209
 
155
210
  | Flag | Description |
@@ -287,12 +342,26 @@ atomic --tools read,search,find,ls -p "Review the code"
287
342
  | `ATOMIC_CODING_AGENT_DIR` | Override config directory; default is `~/.atomic/agent`. Bundled intercom runtime/config files live under its `intercom/` subdirectory |
288
343
  | `ATOMIC_CODING_AGENT_SESSION_DIR` | Override session storage directory; overridden by `--session-dir` |
289
344
  | `ATOMIC_PACKAGE_DIR` | Override package directory, useful for Nix/Guix store paths |
345
+ | `ATOMIC_REDUCED_MOTION` | Set to `1` to skip startup choreography and render the ordinary working identity as a static regular accent `∀` without a timer |
290
346
  | `ATOMIC_OFFLINE` | Disable startup network operations, including update checks, package update checks, and install/update telemetry |
291
347
  | `ATOMIC_SKIP_VERSION_CHECK` | Skip the Atomic version update check at startup. This prevents the latest-version request |
292
348
  | `ATOMIC_TELEMETRY` | Override install/update telemetry: `1`/`true`/`yes` or `0`/`false`/`no`. This does not disable update checks |
349
+ | `NODE_COMPILE_CACHE` | Override the directory for Node's persistent compile cache, which Atomic enables automatically on Node >= 22.8 to speed up startup (most noticeable on Windows). Set `NODE_DISABLE_COMPILE_CACHE=1` to opt out |
293
350
  | `PI_CACHE_RETENTION` | Provider/upstream-specific prompt-cache retention knob; set to `long` where supported |
294
351
  | `VISUAL`, `EDITOR` | External editor for CTRL+G |
295
352
 
353
+ Every foreground or background bash execution receives one execution-time snapshot of the active session:
354
+
355
+ | Atomic variable | Exact compatibility alias | Value |
356
+ |-----------------|---------------------------|-------|
357
+ | `ATOMIC_SESSION_ID` | `PI_SESSION_ID` | Active session ID |
358
+ | `ATOMIC_SESSION_FILE` | `PI_SESSION_FILE` | Active session JSONL path; omitted for unsaved sessions |
359
+ | `ATOMIC_PROVIDER` | `PI_PROVIDER` | Active model provider; omitted when no model is selected |
360
+ | `ATOMIC_MODEL` | `PI_MODEL` | Active model ID; omitted when no model is selected |
361
+ | `ATOMIC_REASONING_LEVEL` | `PI_REASONING_LEVEL` | Active reasoning level |
362
+
363
+ The snapshot is taken when the command executes, not when the tool is created, so resumed sessions, workflow stages, isolated sessions, model changes, and concurrent sessions cannot reuse stale metadata. Atomic preserves all unrelated inherited and caller-supplied environment variables; only the ten names above are cleared and overlaid. Factory-created bash tools expose the same metadata by default and can set `exposeSessionEnvironment: false` to omit it.
364
+
296
365
  `PI_*` aliases are also supported for app-specific `ATOMIC_*` variables for legacy compatibility. For example, [Intercom](/intercom) honors `PI_CODING_AGENT_DIR` when `ATOMIC_CODING_AGENT_DIR` is unset and still reads legacy `~/.pi/agent/intercom/config.json` when the Atomic config is absent. `PI_CACHE_RETENTION` is not one of those aliases and has no `ATOMIC_*` equivalent. Use `PI_CACHE_RETENTION=long` when configuring prompt-cache retention for providers/upstreams that support long-lived caches. Intercom's default broker starter works across Node-based installs, Bun source checkouts, and standalone Atomic binaries without requiring `npx`, `tsx`, or `bun` to be present on `PATH`; custom broker commands remain explicit opt-in overrides.
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  ## Design Principles
package/docs/windows.md CHANGED
@@ -26,4 +26,4 @@ On Windows, Atomic canonicalizes paths before starting native filesystem watcher
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  When self-update starts on Windows, Atomic first cleans any previous `.atomic-native-quarantine` directory under the global package root. If native add-ons from the current install are loaded by the running process, Atomic moves those files into a per-run quarantine directory and copies them back into place before invoking the package manager. This lets the package manager replace native dependency files that Windows would otherwise keep locked.
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- If Atomic cannot safely self-update the current installation, it exits with a clear message instead of guessing. The message explains that the install is unsupported, unmanaged, or not writable; prints the detected executable path when available; and tells you to update Atomic with the package manager, wrapper, source checkout, or release artifact that originally installed it.
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+ If Atomic cannot safely self-update the current installation, it exits with a clear message instead of guessing. The message explains that the install is unsupported, unmanaged, or not writable; prints the detected executable path when available; and tells you to update Atomic with the package manager, wrapper, source checkout, or release artifact that originally installed it. Standalone Bun binaries direct users to the current [Atomic releases](https://github.com/bastani-inc/atomic/releases/latest), never upstream Pi artifacts.