@bastani/atomic 0.8.29 → 0.8.30-alpha.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (144) hide show
  1. package/CHANGELOG.md +25 -0
  2. package/dist/builtin/cursor/CHANGELOG.md +4 -0
  3. package/dist/builtin/cursor/package.json +2 -2
  4. package/dist/builtin/intercom/CHANGELOG.md +4 -0
  5. package/dist/builtin/intercom/package.json +2 -2
  6. package/dist/builtin/mcp/CHANGELOG.md +4 -0
  7. package/dist/builtin/mcp/package.json +3 -3
  8. package/dist/builtin/subagents/CHANGELOG.md +9 -0
  9. package/dist/builtin/subagents/README.md +10 -30
  10. package/dist/builtin/subagents/package.json +4 -4
  11. package/dist/builtin/subagents/skills/subagent/SKILL.md +5 -11
  12. package/dist/builtin/subagents/src/agents/agent-management.ts +0 -5
  13. package/dist/builtin/subagents/src/agents/agent-serializer.ts +7 -3
  14. package/dist/builtin/subagents/src/agents/agents.ts +4 -29
  15. package/dist/builtin/subagents/src/agents/chain-serializer.ts +27 -25
  16. package/dist/builtin/subagents/src/extension/schemas.ts +0 -75
  17. package/dist/builtin/subagents/src/runs/background/async-execution.ts +0 -29
  18. package/dist/builtin/subagents/src/runs/background/run-status.ts +1 -2
  19. package/dist/builtin/subagents/src/runs/background/subagent-runner.ts +134 -239
  20. package/dist/builtin/subagents/src/runs/foreground/chain-execution.ts +1 -52
  21. package/dist/builtin/subagents/src/runs/foreground/execution.ts +103 -94
  22. package/dist/builtin/subagents/src/runs/foreground/subagent-executor.ts +0 -10
  23. package/dist/builtin/subagents/src/runs/shared/dynamic-fanout.ts +16 -8
  24. package/dist/builtin/subagents/src/runs/shared/model-fallback.ts +0 -1
  25. package/dist/builtin/subagents/src/runs/shared/parallel-utils.ts +0 -3
  26. package/dist/builtin/subagents/src/runs/shared/structured-output.ts +67 -2
  27. package/dist/builtin/subagents/src/runs/shared/subagent-control.ts +6 -20
  28. package/dist/builtin/subagents/src/runs/shared/subagent-prompt-runtime.ts +1 -1
  29. package/dist/builtin/subagents/src/runs/shared/workflow-graph.ts +2 -6
  30. package/dist/builtin/subagents/src/shared/settings.ts +1 -4
  31. package/dist/builtin/subagents/src/shared/types.ts +1 -156
  32. package/dist/builtin/subagents/src/tui/render.ts +0 -1
  33. package/dist/builtin/web-access/CHANGELOG.md +4 -0
  34. package/dist/builtin/web-access/package.json +2 -2
  35. package/dist/builtin/workflows/CHANGELOG.md +11 -0
  36. package/dist/builtin/workflows/README.md +2 -2
  37. package/dist/builtin/workflows/package.json +2 -2
  38. package/dist/builtin/workflows/src/extension/index.ts +8 -1
  39. package/dist/builtin/workflows/src/extension/wiring.ts +66 -10
  40. package/dist/builtin/workflows/src/runs/foreground/executor.ts +70 -19
  41. package/dist/builtin/workflows/src/runs/foreground/stage-runner.ts +98 -14
  42. package/dist/builtin/workflows/src/runs/shared/model-fallback.ts +0 -1
  43. package/dist/builtin/workflows/src/shared/persistence-restore.ts +4 -0
  44. package/dist/builtin/workflows/src/shared/persistence-session-entries.ts +4 -0
  45. package/dist/builtin/workflows/src/shared/store.ts +2 -0
  46. package/dist/config.d.ts.map +1 -1
  47. package/dist/config.js +18 -4
  48. package/dist/config.js.map +1 -1
  49. package/dist/core/agent-session.d.ts +2 -2
  50. package/dist/core/agent-session.d.ts.map +1 -1
  51. package/dist/core/agent-session.js +21 -9
  52. package/dist/core/agent-session.js.map +1 -1
  53. package/dist/core/compaction/branch-summarization.d.ts.map +1 -1
  54. package/dist/core/compaction/branch-summarization.js +2 -2
  55. package/dist/core/compaction/branch-summarization.js.map +1 -1
  56. package/dist/core/compaction/compaction.d.ts +6 -0
  57. package/dist/core/compaction/compaction.d.ts.map +1 -1
  58. package/dist/core/compaction/compaction.js +2 -0
  59. package/dist/core/compaction/compaction.js.map +1 -1
  60. package/dist/core/compaction/context-compaction.d.ts +43 -16
  61. package/dist/core/compaction/context-compaction.d.ts.map +1 -1
  62. package/dist/core/compaction/context-compaction.js +518 -189
  63. package/dist/core/compaction/context-compaction.js.map +1 -1
  64. package/dist/core/extensions/loader.d.ts +4 -2
  65. package/dist/core/extensions/loader.d.ts.map +1 -1
  66. package/dist/core/extensions/loader.js +11 -7
  67. package/dist/core/extensions/loader.js.map +1 -1
  68. package/dist/core/extensions/types.d.ts +14 -3
  69. package/dist/core/extensions/types.d.ts.map +1 -1
  70. package/dist/core/extensions/types.js.map +1 -1
  71. package/dist/core/model-registry.d.ts.map +1 -1
  72. package/dist/core/model-registry.js +2 -1
  73. package/dist/core/model-registry.js.map +1 -1
  74. package/dist/core/package-manager.d.ts +1 -1
  75. package/dist/core/package-manager.d.ts.map +1 -1
  76. package/dist/core/package-manager.js +52 -18
  77. package/dist/core/package-manager.js.map +1 -1
  78. package/dist/core/resource-loader.d.ts +20 -0
  79. package/dist/core/resource-loader.d.ts.map +1 -1
  80. package/dist/core/resource-loader.js +89 -24
  81. package/dist/core/resource-loader.js.map +1 -1
  82. package/dist/core/session-manager.d.ts +14 -1
  83. package/dist/core/session-manager.d.ts.map +1 -1
  84. package/dist/core/session-manager.js +145 -3
  85. package/dist/core/session-manager.js.map +1 -1
  86. package/dist/core/settings-manager.d.ts +9 -0
  87. package/dist/core/settings-manager.d.ts.map +1 -1
  88. package/dist/core/settings-manager.js +16 -0
  89. package/dist/core/settings-manager.js.map +1 -1
  90. package/dist/core/thinking-blocks.d.ts +7 -0
  91. package/dist/core/thinking-blocks.d.ts.map +1 -0
  92. package/dist/core/thinking-blocks.js +16 -0
  93. package/dist/core/thinking-blocks.js.map +1 -0
  94. package/dist/core/tools/bash.d.ts.map +1 -1
  95. package/dist/core/tools/bash.js +4 -0
  96. package/dist/core/tools/bash.js.map +1 -1
  97. package/dist/index.d.ts +2 -2
  98. package/dist/index.d.ts.map +1 -1
  99. package/dist/index.js +1 -1
  100. package/dist/index.js.map +1 -1
  101. package/dist/main.d.ts.map +1 -1
  102. package/dist/main.js +30 -0
  103. package/dist/main.js.map +1 -1
  104. package/dist/modes/interactive/components/tree-selector.d.ts.map +1 -1
  105. package/dist/modes/interactive/components/tree-selector.js +87 -12
  106. package/dist/modes/interactive/components/tree-selector.js.map +1 -1
  107. package/dist/modes/interactive/interactive-mode.d.ts +1 -0
  108. package/dist/modes/interactive/interactive-mode.d.ts.map +1 -1
  109. package/dist/modes/interactive/interactive-mode.js +37 -18
  110. package/dist/modes/interactive/interactive-mode.js.map +1 -1
  111. package/dist/modes/interactive/theme/theme.d.ts +24 -1
  112. package/dist/modes/interactive/theme/theme.d.ts.map +1 -1
  113. package/dist/modes/interactive/theme/theme.js +58 -13
  114. package/dist/modes/interactive/theme/theme.js.map +1 -1
  115. package/dist/utils/child-process.d.ts +9 -4
  116. package/dist/utils/child-process.d.ts.map +1 -1
  117. package/dist/utils/child-process.js +42 -10
  118. package/dist/utils/child-process.js.map +1 -1
  119. package/dist/utils/version-check.d.ts.map +1 -1
  120. package/dist/utils/version-check.js +4 -27
  121. package/dist/utils/version-check.js.map +1 -1
  122. package/docs/compaction.md +469 -51
  123. package/docs/containerization.md +37 -37
  124. package/docs/extensions.md +23 -14
  125. package/docs/models.md +6 -4
  126. package/docs/packages.md +2 -0
  127. package/docs/providers.md +1 -1
  128. package/docs/subagents.md +11 -4
  129. package/docs/workflows.md +4 -2
  130. package/examples/extensions/README.md +2 -2
  131. package/examples/extensions/custom-provider-anthropic/package-lock.json +2 -2
  132. package/examples/extensions/custom-provider-anthropic/package.json +1 -1
  133. package/examples/extensions/custom-provider-gitlab-duo/package.json +1 -1
  134. package/examples/extensions/gondolin/package-lock.json +2 -2
  135. package/examples/extensions/gondolin/package.json +1 -1
  136. package/examples/extensions/question.ts +39 -18
  137. package/examples/extensions/questionnaire.ts +49 -28
  138. package/examples/extensions/sandbox/package-lock.json +2 -2
  139. package/examples/extensions/sandbox/package.json +1 -1
  140. package/examples/extensions/with-deps/package-lock.json +2 -2
  141. package/examples/extensions/with-deps/package.json +1 -1
  142. package/package.json +7 -5
  143. package/dist/builtin/subagents/src/runs/shared/acceptance.ts +0 -612
  144. package/dist/builtin/subagents/src/runs/shared/completion-guard.ts +0 -147
package/dist/core/session-manager.js.map CHANGED
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{ type AgentMessage } from \"@earendil-works/pi-agent-core\";\nimport type { ImageContent, Message, TextContent } from \"@earendil-works/pi-ai\";\nimport { randomBytes, randomUUID } from \"crypto\";\nimport {\n\tappendFileSync,\n\tcloseSync,\n\texistsSync,\n\tmkdirSync,\n\topenSync,\n\treaddirSync,\n\treadSync,\n\tstatSync,\n\twriteFileSync,\n} from \"fs\";\nimport { readdir, readFile, stat } from \"fs/promises\";\nimport { join, resolve } from \"path\";\nimport { StringDecoder } from \"string_decoder\";\nimport { getAgentDir as getDefaultAgentDir, getSessionsDir } from \"../config.ts\";\nimport { normalizePath, resolvePath } from \"../utils/paths.ts\";\nimport {\n\ttype BashExecutionMessage,\n\ttype CustomMessage,\n\tcreateBranchSummaryMessage,\n\tcreateCustomMessage,\n} from \"./messages.ts\";\n\nexport const CURRENT_SESSION_VERSION = 3;\n\nexport interface SessionHeader {\n\ttype: \"session\";\n\tversion?: number; // v1 sessions don't have this\n\tid: string;\n\ttimestamp: 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Use details for extension-specific metadata (not sent to LLM).\n *\n * display controls TUI rendering:\n * - false: hidden entirely\n * - true: rendered with distinct styling (different from user messages)\n */\nexport interface CustomMessageEntry<T = unknown> extends SessionEntryBase {\n\ttype: \"custom_message\";\n\tcustomType: string;\n\tcontent: string | (TextContent | ImageContent)[];\n\tdetails?: T;\n\tdisplay: boolean;\n\texcludeFromContext?: boolean;\n}\n\n/** Session entry - has id/parentId for tree structure (returned by \"read\" methods in SessionManager) */\nexport type SessionEntry =\n\t| SessionMessageEntry\n\t| ThinkingLevelChangeEntry\n\t| ModelChangeEntry\n\t| CompactionEntry\n\t| ContextCompactionEntry\n\t| BranchSummaryEntry\n\t| CustomEntry\n\t| CustomMessageEntry\n\t| LabelEntry\n\t| SessionInfoEntry;\n\n/** Raw file entry (includes header) */\nexport type FileEntry = SessionHeader | SessionEntry;\n\n/** Tree node for getTree() - defensive copy of session structure */\nexport interface SessionTreeNode {\n\tentry: SessionEntry;\n\tchildren: SessionTreeNode[];\n\t/** Resolved label for this entry, if any */\n\tlabel?: string;\n\t/** Timestamp of the latest label change for this entry, if any */\n\tlabelTimestamp?: string;\n}\n\nexport interface SessionContext {\n\tmessages: AgentMessage[];\n\tthinkingLevel: string;\n\tmodel: { provider: string; modelId: string } | null;\n}\n\nexport interface SessionInfo {\n\tpath: string;\n\tid: string;\n\t/** Working directory where the session was started. 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Mutates in place. */\nfunction migrateV1ToV2(entries: FileEntry[]): void {\n\tconst ids = new Set<string>();\n\tlet prevId: string | null = null;\n\n\tfor (const entry of entries) {\n\t\tif (entry.type === \"session\") {\n\t\t\tentry.version = 2;\n\t\t\tcontinue;\n\t\t}\n\n\t\tentry.id = generateId(ids);\n\t\tentry.parentId = prevId;\n\t\tprevId = entry.id;\n\n\t\t// Convert firstKeptEntryIndex to firstKeptEntryId for compaction\n\t\tif (entry.type === \"compaction\") {\n\t\t\tconst comp = entry as CompactionEntry & { firstKeptEntryIndex?: number };\n\t\t\tif (typeof comp.firstKeptEntryIndex === \"number\") {\n\t\t\t\tconst targetEntry = entries[comp.firstKeptEntryIndex];\n\t\t\t\tif (targetEntry && targetEntry.type !== \"session\") {\n\t\t\t\t\tcomp.firstKeptEntryId = targetEntry.id;\n\t\t\t\t}\n\t\t\t\tdelete comp.firstKeptEntryIndex;\n\t\t\t}\n\t\t}\n\t}\n}\n\n/** Migrate v2 → v3: rename hookMessage role to custom. Mutates in place. */\nfunction migrateV2ToV3(entries: FileEntry[]): void {\n\tfor (const entry of entries) {\n\t\tif (entry.type === \"session\") {\n\t\t\tentry.version = 3;\n\t\t\tcontinue;\n\t\t}\n\n\t\t// Update message entries with hookMessage role\n\t\tif (entry.type === \"message\") {\n\t\t\tconst msgEntry = entry as SessionMessageEntry;\n\t\t\tif (msgEntry.message && (msgEntry.message as { role: string }).role === \"hookMessage\") {\n\t\t\t\t(msgEntry.message as { role: string }).role = \"custom\";\n\t\t\t}\n\t\t}\n\t}\n}\n\n/**\n * Run all necessary migrations to bring entries to current version.\n * Mutates entries in place. Returns true if any migration was applied.\n */\nfunction migrateToCurrentVersion(entries: FileEntry[]): boolean {\n\tconst header = entries.find((e) => e.type === \"session\") as SessionHeader | undefined;\n\tconst version = header?.version ?? 1;\n\n\tif (version >= CURRENT_SESSION_VERSION) return false;\n\n\tif (version < 2) migrateV1ToV2(entries);\n\tif (version < 3) migrateV2ToV3(entries);\n\n\treturn true;\n}\n\n/** Exported for testing */\nexport function migrateSessionEntries(entries: FileEntry[]): void {\n\tmigrateToCurrentVersion(entries);\n}\n\n/** Exported for compaction.test.ts */\nexport function parseSessionEntries(content: string): FileEntry[] {\n\tconst entries: FileEntry[] = [];\n\tconst lines = content.trim().split(\"\\n\");\n\n\tfor (const line of lines) {\n\t\tif (!line.trim()) continue;\n\t\ttry {\n\t\t\tconst entry = JSON.parse(line) as FileEntry;\n\t\t\tentries.push(entry);\n\t\t} catch {\n\t\t\t// Skip malformed lines\n\t\t}\n\t}\n\n\treturn entries;\n}\n\nexport function getLatestCompactionBoundaryEntry(entries: SessionEntry[]): ContextCompactionEntry | null {\n\tfor (let i = entries.length - 1; i >= 0; i--) {\n\t\tconst entry = entries[i];\n\t\tif (entry.type === \"context_compaction\") {\n\t\t\treturn entry;\n\t\t}\n\t}\n\treturn null;\n}\n\nexport interface ContextDeletionFilters {\n\tdeletedEntryIds: Set<string>;\n\tdeletedContentBlocks: Map<string, Set<number>>;\n}\n\nexport function buildContextDeletionFilters(path: SessionEntry[]): ContextDeletionFilters {\n\tconst deletedEntryIds = new Set<string>();\n\tconst deletedContentBlocks = new Map<string, Set<number>>();\n\n\tfor (const entry of path) {\n\t\tif (entry.type !== \"context_compaction\") continue;\n\t\tfor (const target of entry.deletedTargets) {\n\t\t\tif (target.kind === \"entry\") {\n\t\t\t\tdeletedEntryIds.add(target.entryId);\n\t\t\t\tcontinue;\n\t\t\t}\n\t\t\tconst existing = deletedContentBlocks.get(target.entryId) ?? new Set<number>();\n\t\t\texisting.add(target.blockIndex);\n\t\t\tdeletedContentBlocks.set(target.entryId, existing);\n\t\t}\n\t}\n\n\treturn { deletedEntryIds, deletedContentBlocks };\n}\n\nfunction filterContentArray<T>(content: T[], deletedBlocks: ReadonlySet<number>): T[] {\n\treturn content.filter((_, index) => !deletedBlocks.has(index));\n}\n\nfunction filterMessageContentBlocks(\n\tmessage: AgentMessage,\n\tdeletedBlocks: ReadonlySet<number> | undefined,\n): AgentMessage | undefined {\n\tif (!deletedBlocks || deletedBlocks.size === 0) return message;\n\n\tswitch (message.role) {\n\t\tcase \"user\": {\n\t\t\tif (!Array.isArray(message.content)) return message;\n\t\t\tconst content = filterContentArray(message.content, deletedBlocks);\n\t\t\tif (content.length === 0) return undefined;\n\t\t\treturn { ...message, content };\n\t\t}\n\t\tcase \"assistant\": {\n\t\t\tconst content = filterContentArray(message.content, deletedBlocks);\n\t\t\tif (content.length === 0) return undefined;\n\t\t\treturn { ...message, content };\n\t\t}\n\t\tcase \"toolResult\": {\n\t\t\tif (!Array.isArray(message.content)) return message;\n\t\t\tconst content = filterContentArray(message.content, deletedBlocks);\n\t\t\tif (content.length === 0) return undefined;\n\t\t\treturn { ...message, content };\n\t\t}\n\t\tcase \"custom\": {\n\t\t\tif (!Array.isArray(message.content)) return message;\n\t\t\tconst content = filterContentArray(message.content, deletedBlocks);\n\t\t\tif (content.length === 0) return undefined;\n\t\t\treturn { ...message, content };\n\t\t}\n\t\tcase \"bashExecution\":\n\t\tcase \"branchSummary\":\n\t\t\treturn message;\n\t}\n}\n\n/**\n * Return the active branch path after applying logical context-deletion entries.\n * Whole-entry deletions remove the entry from the path. Content-block deletions\n * clone only affected message/custom-message entries so retained blocks stay verbatim.\n */\nexport function buildContextDeletionFilteredPath(\n\tpath: SessionEntry[],\n\tfilters: ContextDeletionFilters = buildContextDeletionFilters(path),\n): SessionEntry[] {\n\tconst filteredPath: SessionEntry[] = [];\n\n\tfor (const entry of path) {\n\t\tif (filters.deletedEntryIds.has(entry.id)) continue;\n\n\t\tconst deletedBlocks = filters.deletedContentBlocks.get(entry.id);\n\t\tif (!deletedBlocks || deletedBlocks.size === 0) {\n\t\t\tfilteredPath.push(entry);\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (entry.type === \"message\") {\n\t\t\tconst message = filterMessageContentBlocks(entry.message, deletedBlocks);\n\t\t\tif (message) filteredPath.push({ ...entry, message });\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (entry.type === \"custom_message\" && Array.isArray(entry.content)) {\n\t\t\tconst content = filterContentArray(entry.content, deletedBlocks);\n\t\t\tif (content.length > 0) filteredPath.push({ ...entry, content });\n\t\t\tcontinue;\n\t\t}\n\n\t\tfilteredPath.push(entry);\n\t}\n\n\treturn filteredPath;\n}\n\n/**\n * Build the session context from entries using tree traversal.\n * If leafId is provided, walks from that entry to root.\n * Applies context-deletion filtering and includes branch summaries along the path.\n */\nexport function buildSessionContext(\n\tentries: SessionEntry[],\n\tleafId?: string | null,\n\tbyId?: Map<string, SessionEntry>,\n): SessionContext {\n\t// Build uuid index if not available\n\tif (!byId) {\n\t\tbyId = new Map<string, SessionEntry>();\n\t\tfor (const entry of entries) {\n\t\t\tbyId.set(entry.id, entry);\n\t\t}\n\t}\n\n\t// Find leaf\n\tlet leaf: SessionEntry | undefined;\n\tif (leafId === null) {\n\t\t// Explicitly null - return no messages (navigated to before first entry)\n\t\treturn { messages: [], thinkingLevel: \"off\", model: null };\n\t}\n\tif (leafId) {\n\t\tleaf = byId.get(leafId);\n\t}\n\tif (!leaf) {\n\t\t// Fallback to last entry (when leafId is undefined)\n\t\tleaf = entries[entries.length - 1];\n\t}\n\n\tif (!leaf) {\n\t\treturn { messages: [], thinkingLevel: \"off\", model: null };\n\t}\n\n\t// Walk from leaf to root, collecting path\n\tconst path: SessionEntry[] = [];\n\tlet current: SessionEntry | undefined = leaf;\n\twhile (current) {\n\t\tpath.unshift(current);\n\t\tcurrent = current.parentId ? byId.get(current.parentId) : undefined;\n\t}\n\n\t// Extract settings\n\tlet thinkingLevel = \"off\";\n\tlet model: { provider: string; modelId: string } | null = null;\n\n\tfor (const entry of path) {\n\t\tif (entry.type === \"thinking_level_change\") {\n\t\t\tthinkingLevel = entry.thinkingLevel;\n\t\t} else if (entry.type === \"model_change\") {\n\t\t\tmodel = { provider: entry.provider, modelId: entry.modelId };\n\t\t} else if (entry.type === \"message\" && entry.message.role === \"assistant\") {\n\t\t\tmodel = { provider: entry.message.provider, modelId: entry.message.model };\n\t\t}\n\t}\n\n\tconst filteredPath = buildContextDeletionFilteredPath(path);\n\n\t// Build active context messages from the filtered path. Legacy \"compaction\"\n\t// entries are archival metadata and intentionally inert here.\n\tconst messages: AgentMessage[] = [];\n\n\tconst appendMessage = (entry: SessionEntry) => {\n\t\tlet message: AgentMessage | undefined;\n\t\tif (entry.type === \"message\") {\n\t\t\tmessage = entry.message;\n\t\t} else if (entry.type === \"custom_message\") {\n\t\t\tmessage = createCustomMessage(\n\t\t\t\tentry.customType,\n\t\t\t\tentry.content,\n\t\t\t\tentry.display,\n\t\t\t\tentry.details,\n\t\t\t\tentry.timestamp,\n\t\t\t\tentry.excludeFromContext,\n\t\t\t);\n\t\t} else if (entry.type === \"branch_summary\" && entry.summary) {\n\t\t\tmessage = createBranchSummaryMessage(entry.summary, entry.fromId, entry.timestamp);\n\t\t}\n\n\t\tif (message) messages.push(message);\n\t};\n\n\tfor (const entry of filteredPath) {\n\t\tappendMessage(entry);\n\t}\n\n\treturn { messages, thinkingLevel, model };\n}\n\n/**\n * Compute the default session directory for a cwd.\n * Encodes cwd into a safe directory name under ~/.atomic/agent/sessions/.\n */\nfunction getDefaultSessionDirPath(cwd: string, agentDir: string = getDefaultAgentDir()): string {\n\tconst resolvedCwd = resolvePath(cwd);\n\tconst resolvedAgentDir = resolvePath(agentDir);\n\tconst safePath = `--${resolvedCwd.replace(/^[/\\\\]/, \"\").replace(/[/\\\\:]/g, \"-\")}--`;\n\treturn join(resolvedAgentDir, \"sessions\", safePath);\n}\n\nexport function getDefaultSessionDir(cwd: string, agentDir: string = getDefaultAgentDir()): string {\n\tconst sessionDir = getDefaultSessionDirPath(cwd, agentDir);\n\tif (!existsSync(sessionDir)) {\n\t\tmkdirSync(sessionDir, { recursive: true });\n\t}\n\treturn sessionDir;\n}\n\nconst SESSION_READ_BUFFER_SIZE = 1024 * 1024;\n\nfunction parseSessionEntryLine(line: string): FileEntry | null {\n\tif (!line.trim()) return null;\n\ttry {\n\t\treturn JSON.parse(line) as FileEntry;\n\t} catch {\n\t\treturn null;\n\t}\n}\n\n/** Exported for testing */\nexport function loadEntriesFromFile(filePath: string): FileEntry[] {\n\tconst resolvedFilePath = normalizePath(filePath);\n\tif (!existsSync(resolvedFilePath)) return [];\n\n\tconst entries: FileEntry[] = [];\n\tconst fd = openSync(resolvedFilePath, \"r\");\n\ttry {\n\t\tconst decoder = new StringDecoder(\"utf8\");\n\t\tconst buffer = Buffer.allocUnsafe(SESSION_READ_BUFFER_SIZE);\n\t\tlet pending = \"\";\n\n\t\twhile (true) {\n\t\t\tconst bytesRead = readSync(fd, buffer, 0, buffer.length, null);\n\t\t\tif (bytesRead === 0) break;\n\n\t\t\tpending += decoder.write(buffer.subarray(0, bytesRead));\n\t\t\tlet lineStart = 0;\n\t\t\tlet newlineIndex = pending.indexOf(\"\\n\", lineStart);\n\t\t\twhile (newlineIndex !== -1) {\n\t\t\t\tconst entry = parseSessionEntryLine(pending.slice(lineStart, newlineIndex));\n\t\t\t\tif (entry) entries.push(entry);\n\t\t\t\tlineStart = newlineIndex + 1;\n\t\t\t\tnewlineIndex = pending.indexOf(\"\\n\", lineStart);\n\t\t\t}\n\t\t\tpending = pending.slice(lineStart);\n\t\t}\n\n\t\tpending += decoder.end();\n\t\tconst finalEntry = parseSessionEntryLine(pending);\n\t\tif (finalEntry) entries.push(finalEntry);\n\t} finally {\n\t\tcloseSync(fd);\n\t}\n\n\t// Validate session header\n\tif (entries.length === 0) return entries;\n\tconst header = entries[0];\n\tif (header.type !== \"session\" || !(\"id\" in header) || typeof header.id !== \"string\") {\n\t\treturn [];\n\t}\n\n\treturn entries;\n}\n\nfunction readSessionHeader(filePath: string): SessionHeader | null {\n\ttry {\n\t\tconst fd = openSync(filePath, \"r\");\n\t\tconst buffer = Buffer.alloc(512);\n\t\tconst bytesRead = readSync(fd, buffer, 0, 512, 0);\n\t\tcloseSync(fd);\n\t\tconst firstLine = buffer.toString(\"utf8\", 0, bytesRead).split(\"\\n\")[0];\n\t\tif (!firstLine) return null;\n\t\tconst header = JSON.parse(firstLine) as Record<string, unknown>;\n\t\tif (header.type !== \"session\" || typeof header.id !== \"string\") {\n\t\t\treturn null;\n\t\t}\n\t\treturn header as unknown as SessionHeader;\n\t} catch {\n\t\treturn null;\n\t}\n}\n\nfunction getSessionHeaderCwd(header: SessionHeader): string | undefined {\n\tconst cwd = (header as { cwd?: unknown }).cwd;\n\treturn typeof cwd === \"string\" ? cwd : undefined;\n}\n\nfunction sessionCwdMatches(cwd: string | undefined, resolvedCwd: string): boolean {\n\treturn cwd !== undefined && cwd !== \"\" && resolvePath(cwd) === resolvedCwd;\n}\n\n/** Exported for testing */\nexport function findMostRecentSession(sessionDir: string, cwd?: string): string | null {\n\tconst resolvedSessionDir = normalizePath(sessionDir);\n\tconst resolvedCwd = cwd ? resolvePath(cwd) : undefined;\n\ttry {\n\t\tconst files = readdirSync(resolvedSessionDir)\n\t\t\t.filter((f) => f.endsWith(\".jsonl\"))\n\t\t\t.map((f) => join(resolvedSessionDir, f))\n\t\t\t.map((path) => ({ path, header: readSessionHeader(path) }))\n\t\t\t.filter(\n\t\t\t\t(file): file is { path: string; header: SessionHeader } =>\n\t\t\t\t\tfile.header !== null &&\n\t\t\t\t\t(!resolvedCwd || sessionCwdMatches(getSessionHeaderCwd(file.header), resolvedCwd)),\n\t\t\t)\n\t\t\t.map(({ path }) => ({ path, mtime: statSync(path).mtime }))\n\t\t\t.sort((a, b) => b.mtime.getTime() - a.mtime.getTime());\n\n\t\treturn files[0]?.path || null;\n\t} catch {\n\t\treturn null;\n\t}\n}\n\nfunction isMessageWithContent(message: AgentMessage): message is Message {\n\treturn typeof (message as Message).role === \"string\" && \"content\" in message;\n}\n\nfunction extractTextContent(message: Message): string {\n\tconst content = message.content;\n\tif (typeof content === \"string\") {\n\t\treturn content;\n\t}\n\treturn content\n\t\t.filter((block): block is TextContent => block.type === \"text\")\n\t\t.map((block) => block.text)\n\t\t.join(\" \");\n}\n\nfunction getLastActivityTime(entries: FileEntry[]): number | undefined {\n\tlet lastActivityTime: number | undefined;\n\n\tfor (const entry of entries) {\n\t\tif (entry.type !== \"message\") continue;\n\n\t\tconst message = (entry as SessionMessageEntry).message;\n\t\tif (!isMessageWithContent(message)) continue;\n\t\tif (message.role !== \"user\" && message.role !== \"assistant\") continue;\n\n\t\tconst msgTimestamp = (message as { timestamp?: number }).timestamp;\n\t\tif (typeof msgTimestamp === \"number\") {\n\t\t\tlastActivityTime = Math.max(lastActivityTime ?? 0, msgTimestamp);\n\t\t\tcontinue;\n\t\t}\n\n\t\tconst entryTimestamp = (entry as SessionEntryBase).timestamp;\n\t\tif (typeof entryTimestamp === \"string\") {\n\t\t\tconst t = new Date(entryTimestamp).getTime();\n\t\t\tif (!Number.isNaN(t)) {\n\t\t\t\tlastActivityTime = Math.max(lastActivityTime ?? 0, t);\n\t\t\t}\n\t\t}\n\t}\n\n\treturn lastActivityTime;\n}\n\nfunction getSessionModifiedDate(entries: FileEntry[], header: SessionHeader, statsMtime: Date): Date {\n\tconst lastActivityTime = getLastActivityTime(entries);\n\tif (typeof lastActivityTime === \"number\" && lastActivityTime > 0) {\n\t\treturn new Date(lastActivityTime);\n\t}\n\n\tconst headerTime = typeof header.timestamp === \"string\" ? new Date(header.timestamp).getTime() : NaN;\n\treturn !Number.isNaN(headerTime) ? new Date(headerTime) : statsMtime;\n}\n\nasync function buildSessionInfo(filePath: string): Promise<SessionInfo | null> {\n\ttry {\n\t\tconst content = await readFile(filePath, \"utf8\");\n\t\tconst entries: FileEntry[] = [];\n\t\tconst lines = content.trim().split(\"\\n\");\n\n\t\tfor (const line of lines) {\n\t\t\tif (!line.trim()) continue;\n\t\t\ttry {\n\t\t\t\tentries.push(JSON.parse(line) as FileEntry);\n\t\t\t} catch {\n\t\t\t\t// Skip malformed lines\n\t\t\t}\n\t\t}\n\n\t\tif (entries.length === 0) return null;\n\t\tconst header = entries[0];\n\t\tif (header.type !== \"session\") return null;\n\n\t\tconst stats = await stat(filePath);\n\t\tlet messageCount = 0;\n\t\tlet firstMessage = \"\";\n\t\tconst allMessages: string[] = [];\n\t\tlet name: string | undefined;\n\n\t\tfor (const entry of entries) {\n\t\t\t// Extract session name (use latest, including explicit clears)\n\t\t\tif (entry.type === \"session_info\") {\n\t\t\t\tconst infoEntry = entry as SessionInfoEntry;\n\t\t\t\tname = infoEntry.name?.trim() || undefined;\n\t\t\t}\n\n\t\t\tif (entry.type !== \"message\") continue;\n\t\t\tmessageCount++;\n\n\t\t\tconst message = (entry as SessionMessageEntry).message;\n\t\t\tif (!isMessageWithContent(message)) continue;\n\t\t\tif (message.role !== \"user\" && message.role !== \"assistant\") continue;\n\n\t\t\tconst textContent = extractTextContent(message);\n\t\t\tif (!textContent) continue;\n\n\t\t\tallMessages.push(textContent);\n\t\t\tif (!firstMessage && message.role === \"user\") {\n\t\t\t\tfirstMessage = textContent;\n\t\t\t}\n\t\t}\n\n\t\tconst cwd = typeof (header as SessionHeader).cwd === \"string\" ? (header as SessionHeader).cwd : \"\";\n\t\tconst parentSessionPath = (header as SessionHeader).parentSession;\n\n\t\tconst modified = getSessionModifiedDate(entries, header as SessionHeader, stats.mtime);\n\n\t\treturn {\n\t\t\tpath: filePath,\n\t\t\tid: (header as SessionHeader).id,\n\t\t\tcwd,\n\t\t\tname,\n\t\t\tparentSessionPath,\n\t\t\tcreated: new Date((header as SessionHeader).timestamp),\n\t\t\tmodified,\n\t\t\tmessageCount,\n\t\t\tfirstMessage: firstMessage || \"(no messages)\",\n\t\t\tallMessagesText: allMessages.join(\" \"),\n\t\t};\n\t} catch {\n\t\treturn null;\n\t}\n}\n\nexport type SessionListProgress = (loaded: number, total: number) => void;\n\nasync function listSessionsFromDir(\n\tdir: string,\n\tonProgress?: SessionListProgress,\n\tprogressOffset = 0,\n\tprogressTotal?: number,\n): Promise<SessionInfo[]> {\n\tconst sessions: SessionInfo[] = [];\n\tif (!existsSync(dir)) {\n\t\treturn sessions;\n\t}\n\n\ttry {\n\t\tconst dirEntries = await readdir(dir);\n\t\tconst files = dirEntries.filter((f) => f.endsWith(\".jsonl\")).map((f) => join(dir, f));\n\t\tconst total = progressTotal ?? files.length;\n\n\t\tlet loaded = 0;\n\t\tconst results = await Promise.all(\n\t\t\tfiles.map(async (file) => {\n\t\t\t\tconst info = await buildSessionInfo(file);\n\t\t\t\tloaded++;\n\t\t\t\tonProgress?.(progressOffset + loaded, total);\n\t\t\t\treturn info;\n\t\t\t}),\n\t\t);\n\t\tfor (const info of results) {\n\t\t\tif (info) {\n\t\t\t\tsessions.push(info);\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Return empty list on error\n\t}\n\n\treturn sessions;\n}\n\n/**\n * Manages conversation sessions as append-only trees stored in JSONL files.\n *\n * Each session entry has an id and parentId forming a tree structure. The \"leaf\"\n * pointer tracks the current position. Appending creates a child of the current leaf.\n * Branching moves the leaf to an earlier entry, allowing new branches without\n * modifying history.\n *\n * Use buildSessionContext() to get the resolved message list for the LLM, which\n * applies context-deletion filtering and follows the path from root to current leaf.\n */\nexport class SessionManager {\n\tprivate sessionId: string = \"\";\n\tprivate sessionFile: string | undefined;\n\tprivate sessionDir: string;\n\tprivate cwd: string;\n\tprivate persist: boolean;\n\tprivate flushed: boolean = false;\n\tprivate fileEntries: FileEntry[] = [];\n\tprivate byId: Map<string, SessionEntry> = new Map();\n\tprivate labelsById: Map<string, string> = new Map();\n\tprivate labelTimestampsById: Map<string, string> = new Map();\n\tprivate leafId: string | null = null;\n\n\tprivate constructor(\n\t\tcwd: string,\n\t\tsessionDir: string,\n\t\tsessionFile: string | undefined,\n\t\tpersist: boolean,\n\t\tnewSessionOptions?: NewSessionOptions,\n\t) {\n\t\tthis.cwd = resolvePath(cwd);\n\t\tthis.sessionDir = normalizePath(sessionDir);\n\t\tthis.persist = persist;\n\t\tif (persist && this.sessionDir && !existsSync(this.sessionDir)) {\n\t\t\tmkdirSync(this.sessionDir, { recursive: true });\n\t\t}\n\n\t\tif (sessionFile) {\n\t\t\tthis.setSessionFile(sessionFile);\n\t\t} else {\n\t\t\tthis.newSession(newSessionOptions);\n\t\t}\n\t}\n\n\t/** Switch to a different session file (used for resume and branching) */\n\tsetSessionFile(sessionFile: string): void {\n\t\tthis.sessionFile = resolvePath(sessionFile);\n\t\tif (existsSync(this.sessionFile)) {\n\t\t\tthis.fileEntries = loadEntriesFromFile(this.sessionFile);\n\n\t\t\t// If file was empty or corrupted (no valid header), truncate and start fresh\n\t\t\t// to avoid appending messages without a session header (which breaks the session)\n\t\t\tif (this.fileEntries.length === 0) {\n\t\t\t\tconst explicitPath = this.sessionFile;\n\t\t\t\tthis.newSession();\n\t\t\t\tthis.sessionFile = explicitPath;\n\t\t\t\tthis._rewriteFile();\n\t\t\t\tthis.flushed = true;\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tconst header = this.fileEntries.find((e) => e.type === \"session\") as SessionHeader | undefined;\n\t\t\tthis.sessionId = header?.id ?? createSessionId();\n\n\t\t\tif (migrateToCurrentVersion(this.fileEntries)) {\n\t\t\t\tthis._rewriteFile();\n\t\t\t}\n\n\t\t\tthis._buildIndex();\n\t\t\tthis.flushed = true;\n\t\t} else {\n\t\t\tconst explicitPath = this.sessionFile;\n\t\t\tthis.newSession();\n\t\t\tthis.sessionFile = explicitPath; // preserve explicit path from --session flag\n\t\t}\n\t}\n\n\tnewSession(options?: NewSessionOptions): string | undefined {\n\t\tif (options?.id !== undefined) {\n\t\t\tassertValidSessionId(options.id);\n\t\t}\n\t\tthis.sessionId = options?.id ?? createSessionId();\n\t\tconst timestamp = new Date().toISOString();\n\t\tconst header: SessionHeader = {\n\t\t\ttype: \"session\",\n\t\t\tversion: CURRENT_SESSION_VERSION,\n\t\t\tid: this.sessionId,\n\t\t\ttimestamp,\n\t\t\tcwd: this.cwd,\n\t\t\tparentSession: options?.parentSession,\n\t\t};\n\t\tthis.fileEntries = [header];\n\t\tthis.byId.clear();\n\t\tthis.labelsById.clear();\n\t\tthis.leafId = null;\n\t\tthis.flushed = false;\n\n\t\tif (this.persist) {\n\t\t\tconst fileTimestamp = timestamp.replace(/[:.]/g, \"-\");\n\t\t\tthis.sessionFile = join(this.getSessionDir(), `${fileTimestamp}_${this.sessionId}.jsonl`);\n\t\t}\n\t\treturn this.sessionFile;\n\t}\n\n\tprivate _buildIndex(): void {\n\t\tthis.byId.clear();\n\t\tthis.labelsById.clear();\n\t\tthis.labelTimestampsById.clear();\n\t\tthis.leafId = null;\n\t\tfor (const entry of this.fileEntries) {\n\t\t\tif (entry.type === \"session\") continue;\n\t\t\tthis.byId.set(entry.id, entry);\n\t\t\tthis.leafId = entry.id;\n\t\t\tif (entry.type === \"label\") {\n\t\t\t\tif (entry.label) {\n\t\t\t\t\tthis.labelsById.set(entry.targetId, entry.label);\n\t\t\t\t\tthis.labelTimestampsById.set(entry.targetId, entry.timestamp);\n\t\t\t\t} else {\n\t\t\t\t\tthis.labelsById.delete(entry.targetId);\n\t\t\t\t\tthis.labelTimestampsById.delete(entry.targetId);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate _rewriteFile(): void {\n\t\tif (!this.persist || !this.sessionFile) return;\n\t\tconst content = `${this.fileEntries.map((e) => JSON.stringify(e)).join(\"\\n\")}\\n`;\n\t\twriteFileSync(this.sessionFile, content);\n\t}\n\n\tisPersisted(): boolean {\n\t\treturn this.persist;\n\t}\n\n\tgetCwd(): string {\n\t\treturn this.cwd;\n\t}\n\n\tgetSessionDir(): string {\n\t\treturn this.sessionDir;\n\t}\n\n\tusesDefaultSessionDir(): boolean {\n\t\treturn this.sessionDir === getDefaultSessionDirPath(this.cwd);\n\t}\n\n\tgetSessionId(): string {\n\t\treturn this.sessionId;\n\t}\n\n\tgetSessionFile(): string | undefined {\n\t\treturn this.sessionFile;\n\t}\n\n\t_persist(entry: SessionEntry): void {\n\t\tif (!this.persist || !this.sessionFile) return;\n\n\t\tconst hasAssistant = this.fileEntries.some((e) => e.type === \"message\" && e.message.role === \"assistant\");\n\t\tif (!hasAssistant) {\n\t\t\t// Mark as not flushed so when assistant arrives, all entries get written\n\t\t\tthis.flushed = false;\n\t\t\treturn;\n\t\t}\n\n\t\tif (!this.flushed) {\n\t\t\tfor (const e of this.fileEntries) {\n\t\t\t\tappendFileSync(this.sessionFile, `${JSON.stringify(e)}\\n`);\n\t\t\t}\n\t\t\tthis.flushed = true;\n\t\t} else {\n\t\t\tappendFileSync(this.sessionFile, `${JSON.stringify(entry)}\\n`);\n\t\t}\n\t}\n\n\tprivate _appendEntry(entry: SessionEntry): void {\n\t\tthis.fileEntries.push(entry);\n\t\tthis.byId.set(entry.id, entry);\n\t\tthis.leafId = entry.id;\n\t\tthis._persist(entry);\n\t}\n\n\t/** Append a message as child of current leaf, then advance leaf. Returns entry id.\n\t * Does not allow writing branch summaries or context compaction metadata as regular messages.\n\t * Reason: we want these to be top-level entries in the session, not message session entries,\n\t * so it is easier to find them.\n\t * Branch summaries are appended via appendBranchSummary(), and context compaction metadata via appendContextCompaction().\n\t */\n\tappendMessage(message: Message | CustomMessage | BashExecutionMessage): string {\n\t\tconst entry: SessionMessageEntry = {\n\t\t\ttype: \"message\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tmessage,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Append a thinking level change as child of current leaf, then advance leaf. Returns entry id. */\n\tappendThinkingLevelChange(thinkingLevel: string): string {\n\t\tconst entry: ThinkingLevelChangeEntry = {\n\t\t\ttype: \"thinking_level_change\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tthinkingLevel,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Append a model change as child of current leaf, then advance leaf. Returns entry id. */\n\tappendModelChange(provider: string, modelId: string): string {\n\t\tconst entry: ModelChangeEntry = {\n\t\t\ttype: \"model_change\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tprovider,\n\t\t\tmodelId,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Append logical deletion metadata for deletion-only context compaction. */\n\tappendContextCompaction(\n\t\tdeletedTargets: ContextDeletionTarget[],\n\t\tprotectedEntryIds: string[],\n\t\tstats: ContextCompactionStats,\n\t\tbackupPath?: string,\n\t): string {\n\t\tconst entry: ContextCompactionEntry = {\n\t\t\ttype: \"context_compaction\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tpromptVersion: 1,\n\t\t\tdeletedTargets,\n\t\t\tprotectedEntryIds,\n\t\t\tstats,\n\t\t\tbackupPath,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Write a recoverable snapshot of the current session entries without mutating the active JSONL. */\n\twriteBackupSnapshot(label = \"compact\"): string | undefined {\n\t\tif (!this.persist || !this.sessionFile) return undefined;\n\t\tconst safeLabel = label.replace(/[^a-z0-9_-]/gi, \"-\").replace(/-+/g, \"-\").replace(/^-|-$/g, \"\") || \"backup\";\n\t\tconst timestamp = new Date().toISOString().replace(/[:.]/g, \"-\");\n\t\tconst backupPath = `${this.sessionFile}.${timestamp}.${safeLabel}.bak`;\n\t\tconst content = `${this.fileEntries.map((e) => JSON.stringify(e)).join(\"\\n\")}\\n`;\n\t\twriteFileSync(backupPath, content);\n\t\treturn backupPath;\n\t}\n\n\t/** Append a custom entry (for extensions) as child of current leaf, then advance leaf. Returns entry id. */\n\tappendCustomEntry(customType: string, data?: unknown): string {\n\t\tconst entry: CustomEntry = {\n\t\t\ttype: \"custom\",\n\t\t\tcustomType,\n\t\t\tdata,\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Append a session info entry (e.g., display name). Returns entry id. */\n\tappendSessionInfo(name: string): string {\n\t\tconst entry: SessionInfoEntry = {\n\t\t\ttype: \"session_info\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tname: name.trim(),\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Get the current session name from the latest session_info entry, if any. */\n\tgetSessionName(): string | undefined {\n\t\t// Walk entries in reverse to find the latest session_info entry.\n\t\t// Empty names explicitly clear the session title.\n\t\tconst entries = this.getEntries();\n\t\tfor (let i = entries.length - 1; i >= 0; i--) {\n\t\t\tconst entry = entries[i];\n\t\t\tif (entry.type === \"session_info\") {\n\t\t\t\treturn entry.name?.trim() || undefined;\n\t\t\t}\n\t\t}\n\t\treturn undefined;\n\t}\n\n\t/**\n\t * Append a custom message entry (for extensions) that participates in LLM context unless excluded.\n\t * @param customType Extension identifier for filtering on reload\n\t * @param content Message content (string or TextContent/ImageContent array)\n\t * @param display Whether to show in TUI (true = styled display, false = hidden)\n\t * @param details Optional extension-specific metadata (not sent to LLM)\n\t * @param excludeFromContext Whether to render/persist without adding to LLM context\n\t * @returns Entry id\n\t */\n\tappendCustomMessageEntry<T = unknown>(\n\t\tcustomType: string,\n\t\tcontent: string | (TextContent | ImageContent)[],\n\t\tdisplay: boolean,\n\t\tdetails?: T,\n\t\texcludeFromContext?: boolean,\n\t): string {\n\t\tconst entry: CustomMessageEntry<T> = {\n\t\t\ttype: \"custom_message\",\n\t\t\tcustomType,\n\t\t\tcontent,\n\t\t\tdisplay,\n\t\t\tdetails,\n\t\t\t...(excludeFromContext === true ? { excludeFromContext: true } : {}),\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t// =========================================================================\n\t// Tree Traversal\n\t// =========================================================================\n\n\tgetLeafId(): string | null {\n\t\treturn this.leafId;\n\t}\n\n\tgetLeafEntry(): SessionEntry | undefined {\n\t\treturn this.leafId ? this.byId.get(this.leafId) : undefined;\n\t}\n\n\tgetEntry(id: string): SessionEntry | undefined {\n\t\treturn this.byId.get(id);\n\t}\n\n\t/**\n\t * Get all direct children of an entry.\n\t */\n\tgetChildren(parentId: string): SessionEntry[] {\n\t\tconst children: SessionEntry[] = [];\n\t\tfor (const entry of this.byId.values()) {\n\t\t\tif (entry.parentId === parentId) {\n\t\t\t\tchildren.push(entry);\n\t\t\t}\n\t\t}\n\t\treturn children;\n\t}\n\n\t/**\n\t * Get the label for an entry, if any.\n\t */\n\tgetLabel(id: string): string | undefined {\n\t\treturn this.labelsById.get(id);\n\t}\n\n\t/**\n\t * Set or clear a label on an entry.\n\t * Labels are user-defined markers for bookmarking/navigation.\n\t * Pass undefined or empty string to clear the label.\n\t */\n\tappendLabelChange(targetId: string, label: string | undefined): string {\n\t\tif (!this.byId.has(targetId)) {\n\t\t\tthrow new Error(`Entry ${targetId} not found`);\n\t\t}\n\t\tconst entry: LabelEntry = {\n\t\t\ttype: \"label\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\ttargetId,\n\t\t\tlabel,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\tif (label) {\n\t\t\tthis.labelsById.set(targetId, label);\n\t\t\tthis.labelTimestampsById.set(targetId, entry.timestamp);\n\t\t} else {\n\t\t\tthis.labelsById.delete(targetId);\n\t\t\tthis.labelTimestampsById.delete(targetId);\n\t\t}\n\t\treturn entry.id;\n\t}\n\n\t/**\n\t * Walk from entry to root, returning all entries in path order.\n\t * Includes all entry types (messages, compaction, model changes, etc.).\n\t * Use buildSessionContext() to get the resolved messages for the LLM.\n\t */\n\tgetBranch(fromId?: string): SessionEntry[] {\n\t\tconst path: SessionEntry[] = [];\n\t\tconst startId = fromId ?? this.leafId;\n\t\tlet current = startId ? this.byId.get(startId) : undefined;\n\t\twhile (current) {\n\t\t\tpath.unshift(current);\n\t\t\tcurrent = current.parentId ? this.byId.get(current.parentId) : undefined;\n\t\t}\n\t\treturn path;\n\t}\n\n\t/**\n\t * Build the session context (what gets sent to the LLM).\n\t * Uses tree traversal from current leaf.\n\t */\n\tbuildSessionContext(): SessionContext {\n\t\treturn buildSessionContext(this.getEntries(), this.leafId, this.byId);\n\t}\n\n\t/**\n\t * Get session header.\n\t */\n\tgetHeader(): SessionHeader | null {\n\t\tconst h = this.fileEntries.find((e) => e.type === \"session\");\n\t\treturn h ? (h as SessionHeader) : null;\n\t}\n\n\t/**\n\t * Get all session entries (excludes header). Returns a shallow copy.\n\t * The session is append-only: use appendXXX() to add entries, branch() to\n\t * change the leaf pointer. Entries cannot be modified or deleted.\n\t */\n\tgetEntries(): SessionEntry[] {\n\t\treturn this.fileEntries.filter((e): e is SessionEntry => e.type !== \"session\");\n\t}\n\n\t/**\n\t * Get the session as a tree structure. Returns a shallow defensive copy of all entries.\n\t * A well-formed session has exactly one root (first entry with parentId === null).\n\t * Orphaned entries (broken parent chain) are also returned as roots.\n\t */\n\tgetTree(): SessionTreeNode[] {\n\t\tconst entries = this.getEntries();\n\t\tconst nodeMap = new Map<string, SessionTreeNode>();\n\t\tconst roots: SessionTreeNode[] = [];\n\n\t\t// Create nodes with resolved labels\n\t\tfor (const entry of entries) {\n\t\t\tconst label = this.labelsById.get(entry.id);\n\t\t\tconst labelTimestamp = this.labelTimestampsById.get(entry.id);\n\t\t\tnodeMap.set(entry.id, { entry, children: [], label, labelTimestamp });\n\t\t}\n\n\t\t// Build tree\n\t\tfor (const entry of entries) {\n\t\t\tconst node = nodeMap.get(entry.id)!;\n\t\t\tif (entry.parentId === null || entry.parentId === entry.id) {\n\t\t\t\troots.push(node);\n\t\t\t} else {\n\t\t\t\tconst parent = nodeMap.get(entry.parentId);\n\t\t\t\tif (parent) {\n\t\t\t\t\tparent.children.push(node);\n\t\t\t\t} else {\n\t\t\t\t\t// Orphan - treat as root\n\t\t\t\t\troots.push(node);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\n\t\t// Sort children by timestamp (oldest first, newest at bottom)\n\t\t// Use iterative approach to avoid stack overflow on deep trees\n\t\tconst stack: SessionTreeNode[] = [...roots];\n\t\twhile (stack.length > 0) {\n\t\t\tconst node = stack.pop()!;\n\t\t\tnode.children.sort((a, b) => new Date(a.entry.timestamp).getTime() - new Date(b.entry.timestamp).getTime());\n\t\t\tstack.push(...node.children);\n\t\t}\n\n\t\treturn roots;\n\t}\n\n\t// =========================================================================\n\t// Branching\n\t// =========================================================================\n\n\t/**\n\t * Start a new branch from an earlier entry.\n\t * Moves the leaf pointer to the specified entry. The next appendXXX() call\n\t * will create a child of that entry, forming a new branch. Existing entries\n\t * are not modified or deleted.\n\t */\n\tbranch(branchFromId: string): void {\n\t\tif (!this.byId.has(branchFromId)) {\n\t\t\tthrow new Error(`Entry ${branchFromId} not found`);\n\t\t}\n\t\tthis.leafId = branchFromId;\n\t}\n\n\t/**\n\t * Reset the leaf pointer to null (before any entries).\n\t * The next appendXXX() call will create a new root entry (parentId = null).\n\t * Use this when navigating to re-edit the first user message.\n\t */\n\tresetLeaf(): void {\n\t\tthis.leafId = null;\n\t}\n\n\t/**\n\t * Start a new branch with a summary of the abandoned path.\n\t * Same as branch(), but also appends a branch_summary entry that captures\n\t * context from the abandoned conversation path.\n\t */\n\tbranchWithSummary(branchFromId: string | null, summary: string, details?: unknown, fromHook?: boolean): string {\n\t\tif (branchFromId !== null && !this.byId.has(branchFromId)) {\n\t\t\tthrow new Error(`Entry ${branchFromId} not found`);\n\t\t}\n\t\tthis.leafId = branchFromId;\n\t\tconst entry: BranchSummaryEntry = {\n\t\t\ttype: \"branch_summary\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: branchFromId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tfromId: branchFromId ?? \"root\",\n\t\t\tsummary,\n\t\t\tdetails,\n\t\t\tfromHook,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/**\n\t * Create a new session file containing only the path from root to the specified leaf.\n\t * Useful for extracting a single conversation path from a branched session.\n\t * Returns the new session file path, or undefined if not persisting.\n\t */\n\tcreateBranchedSession(leafId: string): string | undefined {\n\t\tconst previousSessionFile = this.sessionFile;\n\t\tconst path = this.getBranch(leafId);\n\t\tif (path.length === 0) {\n\t\t\tthrow new Error(`Entry ${leafId} not found`);\n\t\t}\n\n\t\t// Filter out LabelEntry from path - we'll recreate them from the resolved map\n\t\tconst pathWithoutLabels = path.filter((e) => e.type !== \"label\");\n\n\t\tconst newSessionId = createSessionId();\n\t\tconst timestamp = new Date().toISOString();\n\t\tconst fileTimestamp = timestamp.replace(/[:.]/g, \"-\");\n\t\tconst newSessionFile = join(this.getSessionDir(), `${fileTimestamp}_${newSessionId}.jsonl`);\n\n\t\tconst header: SessionHeader = {\n\t\t\ttype: \"session\",\n\t\t\tversion: CURRENT_SESSION_VERSION,\n\t\t\tid: newSessionId,\n\t\t\ttimestamp,\n\t\t\tcwd: this.cwd,\n\t\t\tparentSession: this.persist ? previousSessionFile : undefined,\n\t\t};\n\n\t\t// Collect labels for entries in the path\n\t\tconst pathEntryIds = new Set(pathWithoutLabels.map((e) => e.id));\n\t\tconst labelsToWrite: Array<{ targetId: string; label: string; timestamp: string }> = [];\n\t\tfor (const [targetId, label] of this.labelsById) {\n\t\t\tif (pathEntryIds.has(targetId)) {\n\t\t\t\tlabelsToWrite.push({ targetId, label, timestamp: this.labelTimestampsById.get(targetId)! });\n\t\t\t}\n\t\t}\n\n\t\tif (this.persist) {\n\t\t\t// Build label entries\n\t\t\tconst lastEntryId = pathWithoutLabels[pathWithoutLabels.length - 1]?.id || null;\n\t\t\tlet parentId = lastEntryId;\n\t\t\tconst labelEntries: LabelEntry[] = [];\n\t\t\tfor (const { targetId, label, timestamp: labelTimestamp } of labelsToWrite) {\n\t\t\t\tconst labelEntry: LabelEntry = {\n\t\t\t\t\ttype: \"label\",\n\t\t\t\t\tid: generateId(new Set(pathEntryIds)),\n\t\t\t\t\tparentId,\n\t\t\t\t\ttimestamp: labelTimestamp,\n\t\t\t\t\ttargetId,\n\t\t\t\t\tlabel,\n\t\t\t\t};\n\t\t\t\tpathEntryIds.add(labelEntry.id);\n\t\t\t\tlabelEntries.push(labelEntry);\n\t\t\t\tparentId = labelEntry.id;\n\t\t\t}\n\n\t\t\tthis.fileEntries = [header, ...pathWithoutLabels, ...labelEntries];\n\t\t\tthis.sessionId = newSessionId;\n\t\t\tthis.sessionFile = newSessionFile;\n\t\t\tthis._buildIndex();\n\n\t\t\t// Only write the file now if it contains an assistant message.\n\t\t\t// Otherwise defer to _persist(), which creates the file on the\n\t\t\t// first assistant response, matching the newSession() contract\n\t\t\t// and avoiding the duplicate-header bug when _persist()'s\n\t\t\t// no-assistant guard later resets flushed to false.\n\t\t\tconst hasAssistant = this.fileEntries.some((e) => e.type === \"message\" && e.message.role === \"assistant\");\n\t\t\tif (hasAssistant) {\n\t\t\t\tthis._rewriteFile();\n\t\t\t\tthis.flushed = true;\n\t\t\t} else {\n\t\t\t\tthis.flushed = false;\n\t\t\t}\n\n\t\t\treturn newSessionFile;\n\t\t}\n\n\t\t// In-memory mode: replace current session with the path + labels\n\t\tconst labelEntries: LabelEntry[] = [];\n\t\tlet parentId = pathWithoutLabels[pathWithoutLabels.length - 1]?.id || null;\n\t\tfor (const { targetId, label, timestamp: labelTimestamp } of labelsToWrite) {\n\t\t\tconst labelEntry: LabelEntry = {\n\t\t\t\ttype: \"label\",\n\t\t\t\tid: generateId(new Set([...pathEntryIds, ...labelEntries.map((e) => e.id)])),\n\t\t\t\tparentId,\n\t\t\t\ttimestamp: labelTimestamp,\n\t\t\t\ttargetId,\n\t\t\t\tlabel,\n\t\t\t};\n\t\t\tlabelEntries.push(labelEntry);\n\t\t\tparentId = labelEntry.id;\n\t\t}\n\t\tthis.fileEntries = [header, ...pathWithoutLabels, ...labelEntries];\n\t\tthis.sessionId = newSessionId;\n\t\tthis._buildIndex();\n\t\treturn undefined;\n\t}\n\n\t/**\n\t * Create a new session.\n\t * @param cwd Working directory (stored in session header)\n\t * @param sessionDir Optional session directory. If omitted, uses default (~/.atomic/agent/sessions/<encoded-cwd>/).\n\t */\n\tstatic create(cwd: string, sessionDir?: string, options?: NewSessionOptions): SessionManager {\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : getDefaultSessionDir(cwd);\n\t\treturn new SessionManager(cwd, dir, undefined, true, options);\n\t}\n\n\t/**\n\t * Open a specific session file.\n\t * @param path Path to session file\n\t * @param sessionDir Optional session directory for /new or /branch. If omitted, derives from file's parent.\n\t * @param cwdOverride Optional cwd override instead of the session header cwd.\n\t */\n\tstatic open(path: string, sessionDir?: string, cwdOverride?: string): SessionManager {\n\t\tconst resolvedPath = resolvePath(path);\n\t\t// Extract cwd from session header if possible, otherwise use process.cwd()\n\t\tconst entries = loadEntriesFromFile(resolvedPath);\n\t\tconst header = entries.find((e) => e.type === \"session\") as SessionHeader | undefined;\n\t\tconst cwd = cwdOverride ?? header?.cwd ?? process.cwd();\n\t\t// If no sessionDir provided, derive from file's parent directory\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : resolve(resolvedPath, \"..\");\n\t\treturn new SessionManager(cwd, dir, resolvedPath, true);\n\t}\n\n\t/**\n\t * Continue the most recent session, or create new if none.\n\t * @param cwd Working directory\n\t * @param sessionDir Optional session directory. If omitted, uses default (~/.atomic/agent/sessions/<encoded-cwd>/).\n\t */\n\tstatic continueRecent(cwd: string, sessionDir?: string): SessionManager {\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : getDefaultSessionDir(cwd);\n\t\tconst filterCwd = sessionDir !== undefined && dir !== getDefaultSessionDirPath(cwd);\n\t\tconst mostRecent = findMostRecentSession(dir, filterCwd ? cwd : undefined);\n\t\tif (mostRecent) {\n\t\t\treturn new SessionManager(cwd, dir, mostRecent, true);\n\t\t}\n\t\treturn new SessionManager(cwd, dir, undefined, true);\n\t}\n\n\t/** Create an in-memory session (no file persistence) */\n\tstatic inMemory(cwd: string = process.cwd()): SessionManager {\n\t\treturn new SessionManager(cwd, \"\", undefined, false);\n\t}\n\n\t/**\n\t * Fork a session from another project directory into the current project.\n\t * Creates a new session in the target cwd with the full history from the source session.\n\t * @param sourcePath Path to the source session file\n\t * @param targetCwd Target working directory (where the new session will be stored)\n\t * @param sessionDir Optional session directory. If omitted, uses default for targetCwd.\n\t */\n\tstatic forkFrom(\n\t\tsourcePath: string,\n\t\ttargetCwd: string,\n\t\tsessionDir?: string,\n\t\toptions?: NewSessionOptions,\n\t): SessionManager {\n\t\tconst resolvedSourcePath = resolvePath(sourcePath);\n\t\tconst resolvedTargetCwd = resolvePath(targetCwd);\n\t\tconst sourceEntries = loadEntriesFromFile(resolvedSourcePath);\n\t\tif (sourceEntries.length === 0) {\n\t\t\tthrow new Error(`Cannot fork: source session file is empty or invalid: ${resolvedSourcePath}`);\n\t\t}\n\n\t\tconst sourceHeader = sourceEntries.find((e) => e.type === \"session\") as SessionHeader | undefined;\n\t\tif (!sourceHeader) {\n\t\t\tthrow new Error(`Cannot fork: source session has no header: ${resolvedSourcePath}`);\n\t\t}\n\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : getDefaultSessionDir(resolvedTargetCwd);\n\t\tif (!existsSync(dir)) {\n\t\t\tmkdirSync(dir, { recursive: true });\n\t\t}\n\n\t\t// Create new session file with new ID but forked content\n\t\tif (options?.id !== undefined) {\n\t\t\tassertValidSessionId(options.id);\n\t\t}\n\t\tconst newSessionId = options?.id ?? createSessionId();\n\t\tconst timestamp = new Date().toISOString();\n\t\tconst fileTimestamp = timestamp.replace(/[:.]/g, \"-\");\n\t\tconst newSessionFile = join(dir, `${fileTimestamp}_${newSessionId}.jsonl`);\n\n\t\t// Write new header pointing to source as parent, with updated cwd\n\t\tconst newHeader: SessionHeader = {\n\t\t\ttype: \"session\",\n\t\t\tversion: CURRENT_SESSION_VERSION,\n\t\t\tid: newSessionId,\n\t\t\ttimestamp,\n\t\t\tcwd: resolvedTargetCwd,\n\t\t\tparentSession: resolvedSourcePath,\n\t\t};\n\t\tappendFileSync(newSessionFile, `${JSON.stringify(newHeader)}\\n`);\n\n\t\t// Copy all non-header entries from source\n\t\tfor (const entry of sourceEntries) {\n\t\t\tif (entry.type !== \"session\") {\n\t\t\t\tappendFileSync(newSessionFile, `${JSON.stringify(entry)}\\n`);\n\t\t\t}\n\t\t}\n\n\t\treturn new SessionManager(resolvedTargetCwd, dir, newSessionFile, true);\n\t}\n\n\t/**\n\t * List all sessions for a directory.\n\t * @param cwd Working directory (used to compute default session directory)\n\t * @param sessionDir Optional session directory. If omitted, uses default (~/.atomic/agent/sessions/<encoded-cwd>/).\n\t * @param onProgress Optional callback for progress updates (loaded, total)\n\t */\n\tstatic async list(cwd: string, sessionDir?: string, onProgress?: SessionListProgress): Promise<SessionInfo[]> {\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : getDefaultSessionDir(cwd);\n\t\tconst filterCwd = sessionDir !== undefined && dir !== getDefaultSessionDirPath(cwd);\n\t\tconst resolvedCwd = resolvePath(cwd);\n\t\tconst sessions = (await listSessionsFromDir(dir, onProgress)).filter(\n\t\t\t(session) => !filterCwd || sessionCwdMatches(session.cwd, resolvedCwd),\n\t\t);\n\t\tsessions.sort((a, b) => b.modified.getTime() - a.modified.getTime());\n\t\treturn sessions;\n\t}\n\n\t/**\n\t * List all sessions across all project directories.\n\t * @param onProgress Optional callback for progress updates (loaded, total)\n\t */\n\tstatic async listAll(onProgress?: SessionListProgress): Promise<SessionInfo[]>;\n\tstatic async listAll(sessionDir?: string, onProgress?: SessionListProgress): Promise<SessionInfo[]>;\n\tstatic async listAll(\n\t\tsessionDirOrOnProgress?: string | SessionListProgress,\n\t\tonProgress?: SessionListProgress,\n\t): Promise<SessionInfo[]> {\n\t\tconst customSessionDir =\n\t\t\ttypeof sessionDirOrOnProgress === \"string\" ? normalizePath(sessionDirOrOnProgress) : undefined;\n\t\tconst progress = typeof sessionDirOrOnProgress === \"function\" ? sessionDirOrOnProgress : onProgress;\n\t\tif (customSessionDir) {\n\t\t\tconst sessions = await listSessionsFromDir(customSessionDir, progress);\n\t\t\tsessions.sort((a, b) => b.modified.getTime() - a.modified.getTime());\n\t\t\treturn sessions;\n\t\t}\n\n\t\tconst sessionsDir = getSessionsDir();\n\n\t\ttry {\n\t\t\tif (!existsSync(sessionsDir)) {\n\t\t\t\treturn [];\n\t\t\t}\n\t\t\tconst entries = await readdir(sessionsDir, { withFileTypes: true });\n\t\t\tconst dirs = entries.filter((e) => e.isDirectory()).map((e) => join(sessionsDir, e.name));\n\n\t\t\t// Count total files first for accurate progress\n\t\t\tlet totalFiles = 0;\n\t\t\tconst dirFiles: string[][] = [];\n\t\t\tfor (const dir of dirs) {\n\t\t\t\ttry {\n\t\t\t\t\tconst files = (await readdir(dir)).filter((f) => f.endsWith(\".jsonl\"));\n\t\t\t\t\tdirFiles.push(files.map((f) => join(dir, f)));\n\t\t\t\t\ttotalFiles += files.length;\n\t\t\t\t} catch {\n\t\t\t\t\tdirFiles.push([]);\n\t\t\t\t}\n\t\t\t}\n\n\t\t\t// Process all files with progress tracking\n\t\t\tlet loaded = 0;\n\t\t\tconst sessions: SessionInfo[] = [];\n\t\t\tconst allFiles = dirFiles.flat();\n\n\t\t\tconst results = await Promise.all(\n\t\t\t\tallFiles.map(async (file) => {\n\t\t\t\t\tconst info = await buildSessionInfo(file);\n\t\t\t\t\tloaded++;\n\t\t\t\t\tprogress?.(loaded, totalFiles);\n\t\t\t\t\treturn info;\n\t\t\t\t}),\n\t\t\t);\n\n\t\t\tfor (const info of results) {\n\t\t\t\tif (info) {\n\t\t\t\t\tsessions.push(info);\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tsessions.sort((a, b) => b.modified.getTime() - a.modified.getTime());\n\t\t\treturn sessions;\n\t\t} catch {\n\t\t\treturn [];\n\t\t}\n\t}\n}\n"]}
1
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Mutates in place. */\nfunction migrateV1ToV2(entries: FileEntry[]): void {\n\tconst ids = new Set<string>();\n\tlet prevId: string | null = null;\n\n\tfor (const entry of entries) {\n\t\tif (entry.type === \"session\") {\n\t\t\tentry.version = 2;\n\t\t\tcontinue;\n\t\t}\n\n\t\tentry.id = generateId(ids);\n\t\tentry.parentId = prevId;\n\t\tprevId = entry.id;\n\n\t\t// Convert firstKeptEntryIndex to firstKeptEntryId for compaction\n\t\tif (entry.type === \"compaction\") {\n\t\t\tconst comp = entry as CompactionEntry & { firstKeptEntryIndex?: number };\n\t\t\tif (typeof comp.firstKeptEntryIndex === \"number\") {\n\t\t\t\tconst targetEntry = entries[comp.firstKeptEntryIndex];\n\t\t\t\tif (targetEntry && targetEntry.type !== \"session\") {\n\t\t\t\t\tcomp.firstKeptEntryId = targetEntry.id;\n\t\t\t\t}\n\t\t\t\tdelete comp.firstKeptEntryIndex;\n\t\t\t}\n\t\t}\n\t}\n}\n\n/** Migrate v2 → v3: rename hookMessage role to custom. Mutates in place. */\nfunction migrateV2ToV3(entries: FileEntry[]): void {\n\tfor (const entry of entries) {\n\t\tif (entry.type === \"session\") {\n\t\t\tentry.version = 3;\n\t\t\tcontinue;\n\t\t}\n\n\t\t// Update message entries with hookMessage role\n\t\tif (entry.type === \"message\") {\n\t\t\tconst msgEntry = entry as SessionMessageEntry;\n\t\t\tif (msgEntry.message && (msgEntry.message as { role: string }).role === \"hookMessage\") {\n\t\t\t\t(msgEntry.message as { role: string }).role = \"custom\";\n\t\t\t}\n\t\t}\n\t}\n}\n\n/**\n * Run all necessary migrations to bring entries to current version.\n * Mutates entries in place. Returns true if any migration was applied.\n */\nfunction migrateToCurrentVersion(entries: FileEntry[]): boolean {\n\tconst header = entries.find((e) => e.type === \"session\") as SessionHeader | undefined;\n\tconst version = header?.version ?? 1;\n\n\tif (version >= CURRENT_SESSION_VERSION) return false;\n\n\tif (version < 2) migrateV1ToV2(entries);\n\tif (version < 3) migrateV2ToV3(entries);\n\n\treturn true;\n}\n\n/** Exported for testing */\nexport function migrateSessionEntries(entries: FileEntry[]): void {\n\tmigrateToCurrentVersion(entries);\n}\n\n/** Exported for compaction.test.ts */\nexport function parseSessionEntries(content: string): FileEntry[] {\n\tconst entries: FileEntry[] = [];\n\tconst lines = content.trim().split(\"\\n\");\n\n\tfor (const line of lines) {\n\t\tif (!line.trim()) continue;\n\t\ttry {\n\t\t\tconst entry = JSON.parse(line) as FileEntry;\n\t\t\tentries.push(entry);\n\t\t} catch {\n\t\t\t// Skip malformed lines\n\t\t}\n\t}\n\n\treturn entries;\n}\n\nexport function getLatestCompactionBoundaryEntry(entries: SessionEntry[]): ContextCompactionEntry | null {\n\tfor (let i = entries.length - 1; i >= 0; i--) {\n\t\tconst entry = entries[i];\n\t\tif (entry.type === \"context_compaction\") {\n\t\t\treturn entry;\n\t\t}\n\t}\n\treturn null;\n}\n\nexport interface ContextDeletionFilters {\n\tdeletedEntryIds: Set<string>;\n\tdeletedContentBlocks: Map<string, Set<number>>;\n}\n\n/**\n * Build raw deletion filters from persisted context_compaction entries.\n *\n * These raw filters do not apply replay-safety repair for latest assistant\n * thinking/redacted_thinking blocks or their paired tool results. Production\n * context rebuild paths should prefer `buildEffectiveContextDeletionFilters`\n * or `buildContextDeletionFilteredPath(path)` unless they intentionally need\n * the un-repaired historical deletion plan for diagnostics.\n */\nexport function buildContextDeletionFilters(path: SessionEntry[]): ContextDeletionFilters {\n\tconst deletedEntryIds = new Set<string>();\n\tconst deletedContentBlocks = new Map<string, Set<number>>();\n\n\tfor (const entry of path) {\n\t\tif (entry.type !== \"context_compaction\") continue;\n\t\tfor (const target of entry.deletedTargets) {\n\t\t\tif (target.kind === \"entry\") {\n\t\t\t\tdeletedEntryIds.add(target.entryId);\n\t\t\t\tcontinue;\n\t\t\t}\n\t\t\tconst existing = deletedContentBlocks.get(target.entryId) ?? new Set<number>();\n\t\t\texisting.add(target.blockIndex);\n\t\t\tdeletedContentBlocks.set(target.entryId, existing);\n\t\t}\n\t}\n\n\treturn { deletedEntryIds, deletedContentBlocks };\n}\n\nfunction getToolCallContentBlockId(block: unknown): string | undefined {\n\tif (!block || typeof block !== \"object\") return undefined;\n\tconst candidate = block as { type?: unknown; id?: unknown };\n\treturn candidate.type === \"toolCall\" && typeof candidate.id === \"string\" ? candidate.id : undefined;\n}\n\nfunction getToolResultCallId(message: AgentMessage): string | undefined {\n\tif (message.role !== \"toolResult\") return undefined;\n\tconst toolCallId = (message as { toolCallId?: unknown }).toolCallId;\n\treturn typeof toolCallId === \"string\" ? toolCallId : undefined;\n}\n\nfunction collectToolCallContentBlockIds(content: readonly unknown[]): Set<string> {\n\tconst toolCallIds = new Set<string>();\n\tfor (const block of content) {\n\t\tconst toolCallId = getToolCallContentBlockId(block);\n\t\tif (toolCallId) toolCallIds.add(toolCallId);\n\t}\n\treturn toolCallIds;\n}\n\nfunction addDeletionTarget(filters: ContextDeletionFilters, target: ContextCompactionEntry[\"deletedTargets\"][number]): void {\n\tif (target.kind === \"entry\") {\n\t\tfilters.deletedEntryIds.add(target.entryId);\n\t\treturn;\n\t}\n\tconst existing = filters.deletedContentBlocks.get(target.entryId) ?? new Set<number>();\n\texisting.add(target.blockIndex);\n\tfilters.deletedContentBlocks.set(target.entryId, existing);\n}\n\nfunction buildToolResultEntryIdsByCallId(path: SessionEntry[]): Map<string, Set<string>> {\n\tconst toolResultEntryIdsByCallId = new Map<string, Set<string>>();\n\tfor (const entry of path) {\n\t\tif (entry.type !== \"message\") continue;\n\t\tconst toolCallId = getToolResultCallId(entry.message);\n\t\tif (!toolCallId) continue;\n\t\tconst existing = toolResultEntryIdsByCallId.get(toolCallId) ?? new Set<string>();\n\t\texisting.add(entry.id);\n\t\ttoolResultEntryIdsByCallId.set(toolCallId, existing);\n\t}\n\treturn toolResultEntryIdsByCallId;\n}\n\nfunction findLatestRetainedAssistant(\n\tpath: SessionEntry[],\n\tdeletedEntryIds: ReadonlySet<string>,\n): SessionMessageEntry | undefined {\n\tfor (let index = path.length - 1; index >= 0; index -= 1) {\n\t\tconst entry = path[index];\n\t\tif (entry?.type !== \"message\") continue;\n\t\tif (deletedEntryIds.has(entry.id)) continue;\n\t\tif (entry.message.role === \"assistant\") return entry;\n\t}\n\treturn undefined;\n}\n\nexport function buildEffectiveContextDeletionFilters(path: SessionEntry[]): ContextDeletionFilters {\n\tconst filters = buildContextDeletionFilters(path);\n\tif (!path.some((entry) => entry.type === \"context_compaction\")) return filters;\n\n\tconst rawDeletedEntryIds = new Set<string>();\n\tfor (const compaction of path) {\n\t\tif (compaction.type !== \"context_compaction\") continue;\n\t\tfor (const target of compaction.deletedTargets) {\n\t\t\tif (target.kind === \"entry\") rawDeletedEntryIds.add(target.entryId);\n\t\t}\n\t}\n\tconst latestRetainedAssistant = findLatestRetainedAssistant(path, rawDeletedEntryIds);\n\tconst latestRetainedAssistantContent = latestRetainedAssistant?.message.role === \"assistant\"\n\t\t? latestRetainedAssistant.message.content\n\t\t: undefined;\n\tconst latestRetainedThinkingAssistant = latestRetainedAssistant !== undefined &&\n\t\tlatestRetainedAssistantContent !== undefined &&\n\t\tcontentArrayHasAssistantThinkingBlock(latestRetainedAssistantContent)\n\t\t? latestRetainedAssistant\n\t\t: undefined;\n\tconst toolResultEntryIdsByCallId = buildToolResultEntryIdsByCallId(path);\n\tconst effectiveFilters: ContextDeletionFilters = {\n\t\tdeletedEntryIds: new Set<string>(),\n\t\tdeletedContentBlocks: new Map<string, Set<number>>(),\n\t};\n\tconst allRestoredToolResultEntryIds = new Set<string>();\n\n\tfor (const compaction of path) {\n\t\tif (compaction.type !== \"context_compaction\") continue;\n\t\tfor (const target of compaction.deletedTargets) {\n\t\t\tif (target.kind !== \"content_block\") continue;\n\t\t\tif (target.entryId !== latestRetainedThinkingAssistant?.id) continue;\n\t\t\tconst content = (latestRetainedThinkingAssistant.message as { content: readonly unknown[] }).content;\n\t\t\tfor (const toolCallId of collectToolCallContentBlockIds(content)) {\n\t\t\t\tfor (const entryId of toolResultEntryIdsByCallId.get(toolCallId) ?? []) {\n\t\t\t\t\tallRestoredToolResultEntryIds.add(entryId);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t}\n\n\tfor (const compaction of path) {\n\t\tif (compaction.type !== \"context_compaction\") continue;\n\t\tlet restoresLatestThinkingAssistant = false;\n\t\tfor (const target of compaction.deletedTargets) {\n\t\t\tif (target.kind === \"content_block\" && target.entryId === latestRetainedThinkingAssistant?.id) {\n\t\t\t\trestoresLatestThinkingAssistant = true;\n\t\t\t\tbreak;\n\t\t\t}\n\t\t}\n\n\t\tfor (const target of compaction.deletedTargets) {\n\t\t\tif (target.kind === \"content_block\" && target.entryId === latestRetainedThinkingAssistant?.id) {\n\t\t\t\tcontinue;\n\t\t\t}\n\t\t\t// When a stale persisted plan tried to partially filter the latest\n\t\t\t// thinking-bearing assistant, treat the same compaction entry as one\n\t\t\t// unsafe unit and restore its paired tool results. Later compaction\n\t\t\t// entries may still trim those restored multi-block results normally,\n\t\t\t// but whole-entry deletion of those paired results remains unsafe in any\n\t\t\t// later compaction because the latest assistant tool call is retained.\n\t\t\tif (restoresLatestThinkingAssistant && allRestoredToolResultEntryIds.has(target.entryId)) continue;\n\t\t\tif (target.kind === \"entry\" && allRestoredToolResultEntryIds.has(target.entryId)) continue;\n\t\t\taddDeletionTarget(effectiveFilters, target);\n\t\t}\n\t}\n\n\treturn effectiveFilters;\n}\n\nfunction filterContentArray<T>(content: T[], deletedBlocks: ReadonlySet<number>): T[] {\n\treturn content.filter((_, index) => !deletedBlocks.has(index));\n}\n\nfunction filterMessageContentBlocks(\n\tmessage: AgentMessage,\n\tdeletedBlocks: ReadonlySet<number> | undefined,\n): AgentMessage | undefined {\n\tif (!deletedBlocks || deletedBlocks.size === 0) return message;\n\n\tswitch (message.role) {\n\t\tcase \"user\": {\n\t\t\tif (!Array.isArray(message.content)) return message;\n\t\t\tconst content = filterContentArray(message.content, deletedBlocks);\n\t\t\tif (content.length === 0) return undefined;\n\t\t\treturn { ...message, content };\n\t\t}\n\t\tcase \"assistant\": {\n\t\t\tconst content = filterContentArray(message.content, deletedBlocks);\n\t\t\tif (content.length === 0) return undefined;\n\t\t\treturn { ...message, content };\n\t\t}\n\t\tcase \"toolResult\": {\n\t\t\tif (!Array.isArray(message.content)) return message;\n\t\t\tconst content = filterContentArray(message.content, deletedBlocks);\n\t\t\tif (content.length === 0) return undefined;\n\t\t\treturn { ...message, content };\n\t\t}\n\t\tcase \"custom\": {\n\t\t\tif (!Array.isArray(message.content)) return message;\n\t\t\tconst content = filterContentArray(message.content, deletedBlocks);\n\t\t\tif (content.length === 0) return undefined;\n\t\t\treturn { ...message, content };\n\t\t}\n\t\tcase \"bashExecution\":\n\t\tcase \"branchSummary\":\n\t\t\treturn message;\n\t}\n}\n\n/**\n * Return the active branch path after applying logical context-deletion entries.\n * Whole-entry deletions remove the entry from the path. Content-block deletions\n * clone only affected message/custom-message entries so retained blocks stay verbatim.\n * The optional filters parameter is for callers that already computed effective\n * filters with `buildEffectiveContextDeletionFilters(path)` and want to avoid\n * repeating the repair pass.\n */\nexport function buildContextDeletionFilteredPath(\n\tpath: SessionEntry[],\n\teffectiveFilters: ContextDeletionFilters = buildEffectiveContextDeletionFilters(path),\n): SessionEntry[] {\n\tconst filteredPath: SessionEntry[] = [];\n\n\tfor (const entry of path) {\n\t\tif (effectiveFilters.deletedEntryIds.has(entry.id)) continue;\n\n\t\tconst deletedBlocks = effectiveFilters.deletedContentBlocks.get(entry.id);\n\t\tif (!deletedBlocks || deletedBlocks.size === 0) {\n\t\t\tfilteredPath.push(entry);\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (entry.type === \"message\") {\n\t\t\tconst message = filterMessageContentBlocks(entry.message, deletedBlocks);\n\t\t\tif (message) filteredPath.push({ ...entry, message });\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (entry.type === \"custom_message\" && Array.isArray(entry.content)) {\n\t\t\tconst content = filterContentArray(entry.content, deletedBlocks);\n\t\t\tif (content.length > 0) filteredPath.push({ ...entry, content });\n\t\t\tcontinue;\n\t\t}\n\n\t\tfilteredPath.push(entry);\n\t}\n\n\treturn filteredPath;\n}\n\n/**\n * Build the session context from entries using tree traversal.\n * If leafId is provided, walks from that entry to root.\n * Applies context-deletion filtering and includes branch summaries along the path.\n */\nexport function buildSessionContext(\n\tentries: SessionEntry[],\n\tleafId?: string | null,\n\tbyId?: Map<string, SessionEntry>,\n): SessionContext {\n\t// Build uuid index if not available\n\tif (!byId) {\n\t\tbyId = new Map<string, SessionEntry>();\n\t\tfor (const entry of entries) {\n\t\t\tbyId.set(entry.id, entry);\n\t\t}\n\t}\n\n\t// Find leaf\n\tlet leaf: SessionEntry | undefined;\n\tif (leafId === null) {\n\t\t// Explicitly null - return no messages (navigated to before first entry)\n\t\treturn { messages: [], thinkingLevel: \"off\", model: null };\n\t}\n\tif (leafId) {\n\t\tleaf = byId.get(leafId);\n\t}\n\tif (!leaf) {\n\t\t// Fallback to last entry (when leafId is undefined)\n\t\tleaf = entries[entries.length - 1];\n\t}\n\n\tif (!leaf) {\n\t\treturn { messages: [], thinkingLevel: \"off\", model: null };\n\t}\n\n\t// Walk from leaf to root, collecting path\n\tconst path: SessionEntry[] = [];\n\tlet current: SessionEntry | undefined = leaf;\n\twhile (current) {\n\t\tpath.unshift(current);\n\t\tcurrent = current.parentId ? byId.get(current.parentId) : undefined;\n\t}\n\n\t// Extract settings\n\tlet thinkingLevel = \"off\";\n\tlet model: { provider: string; modelId: string } | null = null;\n\n\tfor (const entry of path) {\n\t\tif (entry.type === \"thinking_level_change\") {\n\t\t\tthinkingLevel = entry.thinkingLevel;\n\t\t} else if (entry.type === \"model_change\") {\n\t\t\tmodel = { provider: entry.provider, modelId: entry.modelId };\n\t\t} else if (entry.type === \"message\" && entry.message.role === \"assistant\") {\n\t\t\tmodel = { provider: entry.message.provider, modelId: entry.message.model };\n\t\t}\n\t}\n\n\tconst filteredPath = buildContextDeletionFilteredPath(path);\n\n\t// Build active context messages from the filtered path. Legacy \"compaction\"\n\t// entries are archival metadata and intentionally inert here.\n\tconst messages: AgentMessage[] = [];\n\n\tconst appendMessage = (entry: SessionEntry) => {\n\t\tlet message: AgentMessage | undefined;\n\t\tif (entry.type === \"message\") {\n\t\t\tmessage = entry.message;\n\t\t} else if (entry.type === \"custom_message\") {\n\t\t\tmessage = createCustomMessage(\n\t\t\t\tentry.customType,\n\t\t\t\tentry.content,\n\t\t\t\tentry.display,\n\t\t\t\tentry.details,\n\t\t\t\tentry.timestamp,\n\t\t\t\tentry.excludeFromContext,\n\t\t\t);\n\t\t} else if (entry.type === \"branch_summary\" && entry.summary) {\n\t\t\tmessage = createBranchSummaryMessage(entry.summary, entry.fromId, entry.timestamp);\n\t\t}\n\n\t\tif (message) messages.push(message);\n\t};\n\n\tfor (const entry of filteredPath) {\n\t\tappendMessage(entry);\n\t}\n\n\treturn { messages, thinkingLevel, model };\n}\n\n/**\n * Compute the default session directory for a cwd.\n * Encodes cwd into a safe directory name under ~/.atomic/agent/sessions/.\n */\nfunction getDefaultSessionDirPath(cwd: string, agentDir: string = getDefaultAgentDir()): string {\n\tconst resolvedCwd = resolvePath(cwd);\n\tconst resolvedAgentDir = resolvePath(agentDir);\n\tconst safePath = `--${resolvedCwd.replace(/^[/\\\\]/, \"\").replace(/[/\\\\:]/g, \"-\")}--`;\n\treturn join(resolvedAgentDir, \"sessions\", safePath);\n}\n\nexport function getDefaultSessionDir(cwd: string, agentDir: string = getDefaultAgentDir()): string {\n\tconst sessionDir = getDefaultSessionDirPath(cwd, agentDir);\n\tif (!existsSync(sessionDir)) {\n\t\tmkdirSync(sessionDir, { recursive: true });\n\t}\n\treturn sessionDir;\n}\n\nconst SESSION_READ_BUFFER_SIZE = 1024 * 1024;\n\nfunction parseSessionEntryLine(line: string): FileEntry | null {\n\tif (!line.trim()) return null;\n\ttry {\n\t\treturn JSON.parse(line) as FileEntry;\n\t} catch {\n\t\treturn null;\n\t}\n}\n\n/** Exported for testing */\nexport function loadEntriesFromFile(filePath: string): FileEntry[] {\n\tconst resolvedFilePath = normalizePath(filePath);\n\tif (!existsSync(resolvedFilePath)) return [];\n\n\tconst entries: FileEntry[] = [];\n\tconst fd = openSync(resolvedFilePath, \"r\");\n\ttry {\n\t\tconst decoder = new StringDecoder(\"utf8\");\n\t\tconst buffer = Buffer.allocUnsafe(SESSION_READ_BUFFER_SIZE);\n\t\tlet pending = \"\";\n\n\t\twhile (true) {\n\t\t\tconst bytesRead = readSync(fd, buffer, 0, buffer.length, null);\n\t\t\tif (bytesRead === 0) break;\n\n\t\t\tpending += decoder.write(buffer.subarray(0, bytesRead));\n\t\t\tlet lineStart = 0;\n\t\t\tlet newlineIndex = pending.indexOf(\"\\n\", lineStart);\n\t\t\twhile (newlineIndex !== -1) {\n\t\t\t\tconst entry = parseSessionEntryLine(pending.slice(lineStart, newlineIndex));\n\t\t\t\tif (entry) entries.push(entry);\n\t\t\t\tlineStart = newlineIndex + 1;\n\t\t\t\tnewlineIndex = pending.indexOf(\"\\n\", lineStart);\n\t\t\t}\n\t\t\tpending = pending.slice(lineStart);\n\t\t}\n\n\t\tpending += decoder.end();\n\t\tconst finalEntry = parseSessionEntryLine(pending);\n\t\tif (finalEntry) entries.push(finalEntry);\n\t} finally {\n\t\tcloseSync(fd);\n\t}\n\n\t// Validate session header\n\tif (entries.length === 0) return entries;\n\tconst header = entries[0];\n\tif (header.type !== \"session\" || !(\"id\" in header) || typeof header.id !== \"string\") {\n\t\treturn [];\n\t}\n\n\treturn entries;\n}\n\nfunction readSessionHeader(filePath: string): SessionHeader | null {\n\ttry {\n\t\tconst fd = openSync(filePath, \"r\");\n\t\tconst buffer = Buffer.alloc(512);\n\t\tconst bytesRead = readSync(fd, buffer, 0, 512, 0);\n\t\tcloseSync(fd);\n\t\tconst firstLine = buffer.toString(\"utf8\", 0, bytesRead).split(\"\\n\")[0];\n\t\tif (!firstLine) return null;\n\t\tconst header = JSON.parse(firstLine) as Record<string, unknown>;\n\t\tif (header.type !== \"session\" || typeof header.id !== \"string\") {\n\t\t\treturn null;\n\t\t}\n\t\treturn header as unknown as SessionHeader;\n\t} catch {\n\t\treturn null;\n\t}\n}\n\nfunction getSessionHeaderCwd(header: SessionHeader): string | undefined {\n\tconst cwd = (header as { cwd?: unknown }).cwd;\n\treturn typeof cwd === \"string\" ? cwd : undefined;\n}\n\nfunction sessionCwdMatches(cwd: string | undefined, resolvedCwd: string): boolean {\n\treturn cwd !== undefined && cwd !== \"\" && resolvePath(cwd) === resolvedCwd;\n}\n\n/** Exported for testing */\nexport function findMostRecentSession(sessionDir: string, cwd?: string): string | null {\n\tconst resolvedSessionDir = normalizePath(sessionDir);\n\tconst resolvedCwd = cwd ? resolvePath(cwd) : undefined;\n\ttry {\n\t\tconst files = readdirSync(resolvedSessionDir)\n\t\t\t.filter((f) => f.endsWith(\".jsonl\"))\n\t\t\t.map((f) => join(resolvedSessionDir, f))\n\t\t\t.map((path) => ({ path, header: readSessionHeader(path) }))\n\t\t\t.filter(\n\t\t\t\t(file): file is { path: string; header: SessionHeader } =>\n\t\t\t\t\tfile.header !== null &&\n\t\t\t\t\t(!resolvedCwd || sessionCwdMatches(getSessionHeaderCwd(file.header), resolvedCwd)),\n\t\t\t)\n\t\t\t.map(({ path }) => ({ path, mtime: statSync(path).mtime }))\n\t\t\t.sort((a, b) => b.mtime.getTime() - a.mtime.getTime());\n\n\t\treturn files[0]?.path || null;\n\t} catch {\n\t\treturn null;\n\t}\n}\n\nfunction isMessageWithContent(message: AgentMessage): message is Message {\n\treturn typeof (message as Message).role === \"string\" && \"content\" in message;\n}\n\nfunction extractTextContent(message: Message): string {\n\tconst content = message.content;\n\tif (typeof content === \"string\") {\n\t\treturn content;\n\t}\n\treturn content\n\t\t.filter((block): block is TextContent => block.type === \"text\")\n\t\t.map((block) => block.text)\n\t\t.join(\" \");\n}\n\nfunction getLastActivityTime(entries: FileEntry[]): number | undefined {\n\tlet lastActivityTime: number | undefined;\n\n\tfor (const entry of entries) {\n\t\tif (entry.type !== \"message\") continue;\n\n\t\tconst message = (entry as SessionMessageEntry).message;\n\t\tif (!isMessageWithContent(message)) continue;\n\t\tif (message.role !== \"user\" && message.role !== \"assistant\") continue;\n\n\t\tconst msgTimestamp = (message as { timestamp?: number }).timestamp;\n\t\tif (typeof msgTimestamp === \"number\") {\n\t\t\tlastActivityTime = Math.max(lastActivityTime ?? 0, msgTimestamp);\n\t\t\tcontinue;\n\t\t}\n\n\t\tconst entryTimestamp = (entry as SessionEntryBase).timestamp;\n\t\tif (typeof entryTimestamp === \"string\") {\n\t\t\tconst t = new Date(entryTimestamp).getTime();\n\t\t\tif (!Number.isNaN(t)) {\n\t\t\t\tlastActivityTime = Math.max(lastActivityTime ?? 0, t);\n\t\t\t}\n\t\t}\n\t}\n\n\treturn lastActivityTime;\n}\n\nfunction getSessionModifiedDate(entries: FileEntry[], header: SessionHeader, statsMtime: Date): Date {\n\tconst lastActivityTime = getLastActivityTime(entries);\n\tif (typeof lastActivityTime === \"number\" && lastActivityTime > 0) {\n\t\treturn new Date(lastActivityTime);\n\t}\n\n\tconst headerTime = typeof header.timestamp === \"string\" ? new Date(header.timestamp).getTime() : NaN;\n\treturn !Number.isNaN(headerTime) ? new Date(headerTime) : statsMtime;\n}\n\nasync function buildSessionInfo(filePath: string): Promise<SessionInfo | null> {\n\ttry {\n\t\tconst content = await readFile(filePath, \"utf8\");\n\t\tconst entries: FileEntry[] = [];\n\t\tconst lines = content.trim().split(\"\\n\");\n\n\t\tfor (const line of lines) {\n\t\t\tif (!line.trim()) continue;\n\t\t\ttry {\n\t\t\t\tentries.push(JSON.parse(line) as FileEntry);\n\t\t\t} catch {\n\t\t\t\t// Skip malformed lines\n\t\t\t}\n\t\t}\n\n\t\tif (entries.length === 0) return null;\n\t\tconst header = entries[0];\n\t\tif (header.type !== \"session\") return null;\n\n\t\tconst stats = await stat(filePath);\n\t\tlet messageCount = 0;\n\t\tlet firstMessage = \"\";\n\t\tconst allMessages: string[] = [];\n\t\tlet name: string | undefined;\n\n\t\tfor (const entry of entries) {\n\t\t\t// Extract session name (use latest, including explicit clears)\n\t\t\tif (entry.type === \"session_info\") {\n\t\t\t\tconst infoEntry = entry as SessionInfoEntry;\n\t\t\t\tname = infoEntry.name?.trim() || undefined;\n\t\t\t}\n\n\t\t\tif (entry.type !== \"message\") continue;\n\t\t\tmessageCount++;\n\n\t\t\tconst message = (entry as SessionMessageEntry).message;\n\t\t\tif (!isMessageWithContent(message)) continue;\n\t\t\tif (message.role !== \"user\" && message.role !== \"assistant\") continue;\n\n\t\t\tconst textContent = extractTextContent(message);\n\t\t\tif (!textContent) continue;\n\n\t\t\tallMessages.push(textContent);\n\t\t\tif (!firstMessage && message.role === \"user\") {\n\t\t\t\tfirstMessage = textContent;\n\t\t\t}\n\t\t}\n\n\t\tconst cwd = typeof (header as SessionHeader).cwd === \"string\" ? (header as SessionHeader).cwd : \"\";\n\t\tconst parentSessionPath = (header as SessionHeader).parentSession;\n\n\t\tconst modified = getSessionModifiedDate(entries, header as SessionHeader, stats.mtime);\n\n\t\treturn {\n\t\t\tpath: filePath,\n\t\t\tid: (header as SessionHeader).id,\n\t\t\tcwd,\n\t\t\tname,\n\t\t\tparentSessionPath,\n\t\t\tcreated: new Date((header as SessionHeader).timestamp),\n\t\t\tmodified,\n\t\t\tmessageCount,\n\t\t\tfirstMessage: firstMessage || \"(no messages)\",\n\t\t\tallMessagesText: allMessages.join(\" \"),\n\t\t};\n\t} catch {\n\t\treturn null;\n\t}\n}\n\nexport type SessionListProgress = (loaded: number, total: number) => void;\n\nasync function listSessionsFromDir(\n\tdir: string,\n\tonProgress?: SessionListProgress,\n\tprogressOffset = 0,\n\tprogressTotal?: number,\n): Promise<SessionInfo[]> {\n\tconst sessions: SessionInfo[] = [];\n\tif (!existsSync(dir)) {\n\t\treturn sessions;\n\t}\n\n\ttry {\n\t\tconst dirEntries = await readdir(dir);\n\t\tconst files = dirEntries.filter((f) => f.endsWith(\".jsonl\")).map((f) => join(dir, f));\n\t\tconst total = progressTotal ?? files.length;\n\n\t\tlet loaded = 0;\n\t\tconst results = await Promise.all(\n\t\t\tfiles.map(async (file) => {\n\t\t\t\tconst info = await buildSessionInfo(file);\n\t\t\t\tloaded++;\n\t\t\t\tonProgress?.(progressOffset + loaded, total);\n\t\t\t\treturn info;\n\t\t\t}),\n\t\t);\n\t\tfor (const info of results) {\n\t\t\tif (info) {\n\t\t\t\tsessions.push(info);\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Return empty list on error\n\t}\n\n\treturn sessions;\n}\n\n/**\n * Manages conversation sessions as append-only trees stored in JSONL files.\n *\n * Each session entry has an id and parentId forming a tree structure. The \"leaf\"\n * pointer tracks the current position. Appending creates a child of the current leaf.\n * Branching moves the leaf to an earlier entry, allowing new branches without\n * modifying history.\n *\n * Use buildSessionContext() to get the resolved message list for the LLM, which\n * applies context-deletion filtering and follows the path from root to current leaf.\n */\nexport class SessionManager {\n\tprivate sessionId: string = \"\";\n\tprivate sessionFile: string | undefined;\n\tprivate sessionDir: string;\n\tprivate cwd: string;\n\tprivate persist: boolean;\n\tprivate flushed: boolean = false;\n\tprivate fileEntries: FileEntry[] = [];\n\tprivate byId: Map<string, SessionEntry> = new Map();\n\tprivate labelsById: Map<string, string> = new Map();\n\tprivate labelTimestampsById: Map<string, string> = new Map();\n\tprivate leafId: string | null = null;\n\n\tprivate constructor(\n\t\tcwd: string,\n\t\tsessionDir: string,\n\t\tsessionFile: string | undefined,\n\t\tpersist: boolean,\n\t\tnewSessionOptions?: NewSessionOptions,\n\t) {\n\t\tthis.cwd = resolvePath(cwd);\n\t\tthis.sessionDir = normalizePath(sessionDir);\n\t\tthis.persist = persist;\n\t\tif (persist && this.sessionDir && !existsSync(this.sessionDir)) {\n\t\t\tmkdirSync(this.sessionDir, { recursive: true });\n\t\t}\n\n\t\tif (sessionFile) {\n\t\t\tthis.setSessionFile(sessionFile);\n\t\t} else {\n\t\t\tthis.newSession(newSessionOptions);\n\t\t}\n\t}\n\n\t/** Switch to a different session file (used for resume and branching) */\n\tsetSessionFile(sessionFile: string): void {\n\t\tthis.sessionFile = resolvePath(sessionFile);\n\t\tif (existsSync(this.sessionFile)) {\n\t\t\tthis.fileEntries = loadEntriesFromFile(this.sessionFile);\n\n\t\t\t// If file was empty or corrupted (no valid header), truncate and start fresh\n\t\t\t// to avoid appending messages without a session header (which breaks the session)\n\t\t\tif (this.fileEntries.length === 0) {\n\t\t\t\tconst explicitPath = this.sessionFile;\n\t\t\t\tthis.newSession();\n\t\t\t\tthis.sessionFile = explicitPath;\n\t\t\t\tthis._rewriteFile();\n\t\t\t\tthis.flushed = true;\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tconst header = this.fileEntries.find((e) => e.type === \"session\") as SessionHeader | undefined;\n\t\t\tthis.sessionId = header?.id ?? createSessionId();\n\n\t\t\tif (migrateToCurrentVersion(this.fileEntries)) {\n\t\t\t\tthis._rewriteFile();\n\t\t\t}\n\n\t\t\tthis._buildIndex();\n\t\t\tthis.flushed = true;\n\t\t} else {\n\t\t\tconst explicitPath = this.sessionFile;\n\t\t\tthis.newSession();\n\t\t\tthis.sessionFile = explicitPath; // preserve explicit path from --session flag\n\t\t}\n\t}\n\n\tnewSession(options?: NewSessionOptions): string | undefined {\n\t\tif (options?.id !== undefined) {\n\t\t\tassertValidSessionId(options.id);\n\t\t}\n\t\tthis.sessionId = options?.id ?? createSessionId();\n\t\tconst timestamp = new Date().toISOString();\n\t\tconst header: SessionHeader = {\n\t\t\ttype: \"session\",\n\t\t\tversion: CURRENT_SESSION_VERSION,\n\t\t\tid: this.sessionId,\n\t\t\ttimestamp,\n\t\t\tcwd: this.cwd,\n\t\t\tparentSession: options?.parentSession,\n\t\t};\n\t\tthis.fileEntries = [header];\n\t\tthis.byId.clear();\n\t\tthis.labelsById.clear();\n\t\tthis.leafId = null;\n\t\tthis.flushed = false;\n\n\t\tif (this.persist) {\n\t\t\tconst fileTimestamp = timestamp.replace(/[:.]/g, \"-\");\n\t\t\tthis.sessionFile = join(this.getSessionDir(), `${fileTimestamp}_${this.sessionId}.jsonl`);\n\t\t}\n\t\treturn this.sessionFile;\n\t}\n\n\tprivate _buildIndex(): void {\n\t\tthis.byId.clear();\n\t\tthis.labelsById.clear();\n\t\tthis.labelTimestampsById.clear();\n\t\tthis.leafId = null;\n\t\tfor (const entry of this.fileEntries) {\n\t\t\tif (entry.type === \"session\") continue;\n\t\t\tthis.byId.set(entry.id, entry);\n\t\t\tthis.leafId = entry.id;\n\t\t\tif (entry.type === \"label\") {\n\t\t\t\tif (entry.label) {\n\t\t\t\t\tthis.labelsById.set(entry.targetId, entry.label);\n\t\t\t\t\tthis.labelTimestampsById.set(entry.targetId, entry.timestamp);\n\t\t\t\t} else {\n\t\t\t\t\tthis.labelsById.delete(entry.targetId);\n\t\t\t\t\tthis.labelTimestampsById.delete(entry.targetId);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate _rewriteFile(): void {\n\t\tif (!this.persist || !this.sessionFile) return;\n\t\tconst content = `${this.fileEntries.map((e) => JSON.stringify(e)).join(\"\\n\")}\\n`;\n\t\twriteFileSync(this.sessionFile, content);\n\t}\n\n\tisPersisted(): boolean {\n\t\treturn this.persist;\n\t}\n\n\tgetCwd(): string {\n\t\treturn this.cwd;\n\t}\n\n\tgetSessionDir(): string {\n\t\treturn this.sessionDir;\n\t}\n\n\tusesDefaultSessionDir(): boolean {\n\t\treturn this.sessionDir === getDefaultSessionDirPath(this.cwd);\n\t}\n\n\tgetSessionId(): string {\n\t\treturn this.sessionId;\n\t}\n\n\tgetSessionFile(): string | undefined {\n\t\treturn this.sessionFile;\n\t}\n\n\t_persist(entry: SessionEntry): void {\n\t\tif (!this.persist || !this.sessionFile) return;\n\n\t\tconst hasAssistant = this.fileEntries.some((e) => e.type === \"message\" && e.message.role === \"assistant\");\n\t\tif (!hasAssistant) {\n\t\t\t// Mark as not flushed so when assistant arrives, all entries get written\n\t\t\tthis.flushed = false;\n\t\t\treturn;\n\t\t}\n\n\t\tif (!this.flushed) {\n\t\t\tfor (const e of this.fileEntries) {\n\t\t\t\tappendFileSync(this.sessionFile, `${JSON.stringify(e)}\\n`);\n\t\t\t}\n\t\t\tthis.flushed = true;\n\t\t} else {\n\t\t\tappendFileSync(this.sessionFile, `${JSON.stringify(entry)}\\n`);\n\t\t}\n\t}\n\n\tprivate _appendEntry(entry: SessionEntry): void {\n\t\tthis.fileEntries.push(entry);\n\t\tthis.byId.set(entry.id, entry);\n\t\tthis.leafId = entry.id;\n\t\tthis._persist(entry);\n\t}\n\n\t/** Append a message as child of current leaf, then advance leaf. Returns entry id.\n\t * Does not allow writing branch summaries or context compaction metadata as regular messages.\n\t * Reason: we want these to be top-level entries in the session, not message session entries,\n\t * so it is easier to find them.\n\t * Branch summaries are appended via appendBranchSummary(), and context compaction metadata via appendContextCompaction().\n\t */\n\tappendMessage(message: Message | CustomMessage | BashExecutionMessage): string {\n\t\tconst entry: SessionMessageEntry = {\n\t\t\ttype: \"message\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tmessage,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Append a thinking level change as child of current leaf, then advance leaf. Returns entry id. */\n\tappendThinkingLevelChange(thinkingLevel: string): string {\n\t\tconst entry: ThinkingLevelChangeEntry = {\n\t\t\ttype: \"thinking_level_change\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tthinkingLevel,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Append a model change as child of current leaf, then advance leaf. Returns entry id. */\n\tappendModelChange(provider: string, modelId: string): string {\n\t\tconst entry: ModelChangeEntry = {\n\t\t\ttype: \"model_change\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tprovider,\n\t\t\tmodelId,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Append logical deletion metadata for deletion-only context compaction. */\n\tappendContextCompaction(\n\t\tdeletedTargets: ContextDeletionTarget[],\n\t\tprotectedEntryIds: string[],\n\t\tstats: ContextCompactionStats,\n\t\tbackupPath?: string,\n\t): string {\n\t\tconst entry: ContextCompactionEntry = {\n\t\t\ttype: \"context_compaction\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tpromptVersion: 1,\n\t\t\tdeletedTargets,\n\t\t\tprotectedEntryIds,\n\t\t\tstats,\n\t\t\tbackupPath,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Write a recoverable snapshot of the current session entries without mutating the active JSONL. */\n\twriteBackupSnapshot(label = \"compact\"): string | undefined {\n\t\tif (!this.persist || !this.sessionFile) return undefined;\n\t\tconst safeLabel = label.replace(/[^a-z0-9_-]/gi, \"-\").replace(/-+/g, \"-\").replace(/^-|-$/g, \"\") || \"backup\";\n\t\tconst timestamp = new Date().toISOString().replace(/[:.]/g, \"-\");\n\t\tconst backupPath = `${this.sessionFile}.${timestamp}.${safeLabel}.bak`;\n\t\tconst content = `${this.fileEntries.map((e) => JSON.stringify(e)).join(\"\\n\")}\\n`;\n\t\twriteFileSync(backupPath, content);\n\t\treturn backupPath;\n\t}\n\n\t/** Append a custom entry (for extensions) as child of current leaf, then advance leaf. Returns entry id. */\n\tappendCustomEntry(customType: string, data?: unknown): string {\n\t\tconst entry: CustomEntry = {\n\t\t\ttype: \"custom\",\n\t\t\tcustomType,\n\t\t\tdata,\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Append a session info entry (e.g., display name). Returns entry id. */\n\tappendSessionInfo(name: string): string {\n\t\tconst entry: SessionInfoEntry = {\n\t\t\ttype: \"session_info\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tname: name.trim(),\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/** Get the current session name from the latest session_info entry, if any. */\n\tgetSessionName(): string | undefined {\n\t\t// Walk entries in reverse to find the latest session_info entry.\n\t\t// Empty names explicitly clear the session title.\n\t\tconst entries = this.getEntries();\n\t\tfor (let i = entries.length - 1; i >= 0; i--) {\n\t\t\tconst entry = entries[i];\n\t\t\tif (entry.type === \"session_info\") {\n\t\t\t\treturn entry.name?.trim() || undefined;\n\t\t\t}\n\t\t}\n\t\treturn undefined;\n\t}\n\n\t/**\n\t * Append a custom message entry (for extensions) that participates in LLM context unless excluded.\n\t * @param customType Extension identifier for filtering on reload\n\t * @param content Message content (string or TextContent/ImageContent array)\n\t * @param display Whether to show in TUI (true = styled display, false = hidden)\n\t * @param details Optional extension-specific metadata (not sent to LLM)\n\t * @param excludeFromContext Whether to render/persist without adding to LLM context\n\t * @returns Entry id\n\t */\n\tappendCustomMessageEntry<T = unknown>(\n\t\tcustomType: string,\n\t\tcontent: string | (TextContent | ImageContent)[],\n\t\tdisplay: boolean,\n\t\tdetails?: T,\n\t\texcludeFromContext?: boolean,\n\t): string {\n\t\tconst entry: CustomMessageEntry<T> = {\n\t\t\ttype: \"custom_message\",\n\t\t\tcustomType,\n\t\t\tcontent,\n\t\t\tdisplay,\n\t\t\tdetails,\n\t\t\t...(excludeFromContext === true ? { excludeFromContext: true } : {}),\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t// =========================================================================\n\t// Tree Traversal\n\t// =========================================================================\n\n\tgetLeafId(): string | null {\n\t\treturn this.leafId;\n\t}\n\n\tgetLeafEntry(): SessionEntry | undefined {\n\t\treturn this.leafId ? this.byId.get(this.leafId) : undefined;\n\t}\n\n\tgetEntry(id: string): SessionEntry | undefined {\n\t\treturn this.byId.get(id);\n\t}\n\n\t/**\n\t * Get all direct children of an entry.\n\t */\n\tgetChildren(parentId: string): SessionEntry[] {\n\t\tconst children: SessionEntry[] = [];\n\t\tfor (const entry of this.byId.values()) {\n\t\t\tif (entry.parentId === parentId) {\n\t\t\t\tchildren.push(entry);\n\t\t\t}\n\t\t}\n\t\treturn children;\n\t}\n\n\t/**\n\t * Get the label for an entry, if any.\n\t */\n\tgetLabel(id: string): string | undefined {\n\t\treturn this.labelsById.get(id);\n\t}\n\n\t/**\n\t * Set or clear a label on an entry.\n\t * Labels are user-defined markers for bookmarking/navigation.\n\t * Pass undefined or empty string to clear the label.\n\t */\n\tappendLabelChange(targetId: string, label: string | undefined): string {\n\t\tif (!this.byId.has(targetId)) {\n\t\t\tthrow new Error(`Entry ${targetId} not found`);\n\t\t}\n\t\tconst entry: LabelEntry = {\n\t\t\ttype: \"label\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: this.leafId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\ttargetId,\n\t\t\tlabel,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\tif (label) {\n\t\t\tthis.labelsById.set(targetId, label);\n\t\t\tthis.labelTimestampsById.set(targetId, entry.timestamp);\n\t\t} else {\n\t\t\tthis.labelsById.delete(targetId);\n\t\t\tthis.labelTimestampsById.delete(targetId);\n\t\t}\n\t\treturn entry.id;\n\t}\n\n\t/**\n\t * Walk from entry to root, returning all entries in path order.\n\t * Includes all entry types (messages, compaction, model changes, etc.).\n\t * Use buildSessionContext() to get the resolved messages for the LLM.\n\t */\n\tgetBranch(fromId?: string): SessionEntry[] {\n\t\tconst path: SessionEntry[] = [];\n\t\tconst startId = fromId ?? this.leafId;\n\t\tlet current = startId ? this.byId.get(startId) : undefined;\n\t\twhile (current) {\n\t\t\tpath.unshift(current);\n\t\t\tcurrent = current.parentId ? this.byId.get(current.parentId) : undefined;\n\t\t}\n\t\treturn path;\n\t}\n\n\t/**\n\t * Build the session context (what gets sent to the LLM).\n\t * Uses tree traversal from current leaf.\n\t */\n\tbuildSessionContext(): SessionContext {\n\t\treturn buildSessionContext(this.getEntries(), this.leafId, this.byId);\n\t}\n\n\t/**\n\t * Get session header.\n\t */\n\tgetHeader(): SessionHeader | null {\n\t\tconst h = this.fileEntries.find((e) => e.type === \"session\");\n\t\treturn h ? (h as SessionHeader) : null;\n\t}\n\n\t/**\n\t * Get all session entries (excludes header). Returns a shallow copy.\n\t * The session is append-only: use appendXXX() to add entries, branch() to\n\t * change the leaf pointer. Entries cannot be modified or deleted.\n\t */\n\tgetEntries(): SessionEntry[] {\n\t\treturn this.fileEntries.filter((e): e is SessionEntry => e.type !== \"session\");\n\t}\n\n\t/**\n\t * Get the session as a tree structure. Returns a shallow defensive copy of all entries.\n\t * A well-formed session has exactly one root (first entry with parentId === null).\n\t * Orphaned entries (broken parent chain) are also returned as roots.\n\t */\n\tgetTree(): SessionTreeNode[] {\n\t\tconst entries = this.getEntries();\n\t\tconst nodeMap = new Map<string, SessionTreeNode>();\n\t\tconst roots: SessionTreeNode[] = [];\n\n\t\t// Create nodes with resolved labels\n\t\tfor (const entry of entries) {\n\t\t\tconst label = this.labelsById.get(entry.id);\n\t\t\tconst labelTimestamp = this.labelTimestampsById.get(entry.id);\n\t\t\tnodeMap.set(entry.id, { entry, children: [], label, labelTimestamp });\n\t\t}\n\n\t\t// Build tree\n\t\tfor (const entry of entries) {\n\t\t\tconst node = nodeMap.get(entry.id)!;\n\t\t\tif (entry.parentId === null || entry.parentId === entry.id) {\n\t\t\t\troots.push(node);\n\t\t\t} else {\n\t\t\t\tconst parent = nodeMap.get(entry.parentId);\n\t\t\t\tif (parent) {\n\t\t\t\t\tparent.children.push(node);\n\t\t\t\t} else {\n\t\t\t\t\t// Orphan - treat as root\n\t\t\t\t\troots.push(node);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\n\t\t// Sort children by timestamp (oldest first, newest at bottom)\n\t\t// Use iterative approach to avoid stack overflow on deep trees\n\t\tconst stack: SessionTreeNode[] = [...roots];\n\t\twhile (stack.length > 0) {\n\t\t\tconst node = stack.pop()!;\n\t\t\tnode.children.sort((a, b) => new Date(a.entry.timestamp).getTime() - new Date(b.entry.timestamp).getTime());\n\t\t\tstack.push(...node.children);\n\t\t}\n\n\t\treturn roots;\n\t}\n\n\t// =========================================================================\n\t// Branching\n\t// =========================================================================\n\n\t/**\n\t * Start a new branch from an earlier entry.\n\t * Moves the leaf pointer to the specified entry. The next appendXXX() call\n\t * will create a child of that entry, forming a new branch. Existing entries\n\t * are not modified or deleted.\n\t */\n\tbranch(branchFromId: string): void {\n\t\tif (!this.byId.has(branchFromId)) {\n\t\t\tthrow new Error(`Entry ${branchFromId} not found`);\n\t\t}\n\t\tthis.leafId = branchFromId;\n\t}\n\n\t/**\n\t * Reset the leaf pointer to null (before any entries).\n\t * The next appendXXX() call will create a new root entry (parentId = null).\n\t * Use this when navigating to re-edit the first user message.\n\t */\n\tresetLeaf(): void {\n\t\tthis.leafId = null;\n\t}\n\n\t/**\n\t * Start a new branch with a summary of the abandoned path.\n\t * Same as branch(), but also appends a branch_summary entry that captures\n\t * context from the abandoned conversation path.\n\t */\n\tbranchWithSummary(branchFromId: string | null, summary: string, details?: unknown, fromHook?: boolean): string {\n\t\tif (branchFromId !== null && !this.byId.has(branchFromId)) {\n\t\t\tthrow new Error(`Entry ${branchFromId} not found`);\n\t\t}\n\t\tthis.leafId = branchFromId;\n\t\tconst entry: BranchSummaryEntry = {\n\t\t\ttype: \"branch_summary\",\n\t\t\tid: generateId(this.byId),\n\t\t\tparentId: branchFromId,\n\t\t\ttimestamp: new Date().toISOString(),\n\t\t\tfromId: branchFromId ?? \"root\",\n\t\t\tsummary,\n\t\t\tdetails,\n\t\t\tfromHook,\n\t\t};\n\t\tthis._appendEntry(entry);\n\t\treturn entry.id;\n\t}\n\n\t/**\n\t * Create a new session file containing only the path from root to the specified leaf.\n\t * Useful for extracting a single conversation path from a branched session.\n\t * Returns the new session file path, or undefined if not persisting.\n\t */\n\tcreateBranchedSession(leafId: string): string | undefined {\n\t\tconst previousSessionFile = this.sessionFile;\n\t\tconst path = this.getBranch(leafId);\n\t\tif (path.length === 0) {\n\t\t\tthrow new Error(`Entry ${leafId} not found`);\n\t\t}\n\n\t\t// Filter out LabelEntry from path - we'll recreate them from the resolved map\n\t\tconst pathWithoutLabels = path.filter((e) => e.type !== \"label\");\n\n\t\tconst newSessionId = createSessionId();\n\t\tconst timestamp = new Date().toISOString();\n\t\tconst fileTimestamp = timestamp.replace(/[:.]/g, \"-\");\n\t\tconst newSessionFile = join(this.getSessionDir(), `${fileTimestamp}_${newSessionId}.jsonl`);\n\n\t\tconst header: SessionHeader = {\n\t\t\ttype: \"session\",\n\t\t\tversion: CURRENT_SESSION_VERSION,\n\t\t\tid: newSessionId,\n\t\t\ttimestamp,\n\t\t\tcwd: this.cwd,\n\t\t\tparentSession: this.persist ? previousSessionFile : undefined,\n\t\t};\n\n\t\t// Collect labels for entries in the path\n\t\tconst pathEntryIds = new Set(pathWithoutLabels.map((e) => e.id));\n\t\tconst labelsToWrite: Array<{ targetId: string; label: string; timestamp: string }> = [];\n\t\tfor (const [targetId, label] of this.labelsById) {\n\t\t\tif (pathEntryIds.has(targetId)) {\n\t\t\t\tlabelsToWrite.push({ targetId, label, timestamp: this.labelTimestampsById.get(targetId)! });\n\t\t\t}\n\t\t}\n\n\t\tif (this.persist) {\n\t\t\t// Build label entries\n\t\t\tconst lastEntryId = pathWithoutLabels[pathWithoutLabels.length - 1]?.id || null;\n\t\t\tlet parentId = lastEntryId;\n\t\t\tconst labelEntries: LabelEntry[] = [];\n\t\t\tfor (const { targetId, label, timestamp: labelTimestamp } of labelsToWrite) {\n\t\t\t\tconst labelEntry: LabelEntry = {\n\t\t\t\t\ttype: \"label\",\n\t\t\t\t\tid: generateId(new Set(pathEntryIds)),\n\t\t\t\t\tparentId,\n\t\t\t\t\ttimestamp: labelTimestamp,\n\t\t\t\t\ttargetId,\n\t\t\t\t\tlabel,\n\t\t\t\t};\n\t\t\t\tpathEntryIds.add(labelEntry.id);\n\t\t\t\tlabelEntries.push(labelEntry);\n\t\t\t\tparentId = labelEntry.id;\n\t\t\t}\n\n\t\t\tthis.fileEntries = [header, ...pathWithoutLabels, ...labelEntries];\n\t\t\tthis.sessionId = newSessionId;\n\t\t\tthis.sessionFile = newSessionFile;\n\t\t\tthis._buildIndex();\n\n\t\t\t// Only write the file now if it contains an assistant message.\n\t\t\t// Otherwise defer to _persist(), which creates the file on the\n\t\t\t// first assistant response, matching the newSession() contract\n\t\t\t// and avoiding the duplicate-header bug when _persist()'s\n\t\t\t// no-assistant guard later resets flushed to false.\n\t\t\tconst hasAssistant = this.fileEntries.some((e) => e.type === \"message\" && e.message.role === \"assistant\");\n\t\t\tif (hasAssistant) {\n\t\t\t\tthis._rewriteFile();\n\t\t\t\tthis.flushed = true;\n\t\t\t} else {\n\t\t\t\tthis.flushed = false;\n\t\t\t}\n\n\t\t\treturn newSessionFile;\n\t\t}\n\n\t\t// In-memory mode: replace current session with the path + labels\n\t\tconst labelEntries: LabelEntry[] = [];\n\t\tlet parentId = pathWithoutLabels[pathWithoutLabels.length - 1]?.id || null;\n\t\tfor (const { targetId, label, timestamp: labelTimestamp } of labelsToWrite) {\n\t\t\tconst labelEntry: LabelEntry = {\n\t\t\t\ttype: \"label\",\n\t\t\t\tid: generateId(new Set([...pathEntryIds, ...labelEntries.map((e) => e.id)])),\n\t\t\t\tparentId,\n\t\t\t\ttimestamp: labelTimestamp,\n\t\t\t\ttargetId,\n\t\t\t\tlabel,\n\t\t\t};\n\t\t\tlabelEntries.push(labelEntry);\n\t\t\tparentId = labelEntry.id;\n\t\t}\n\t\tthis.fileEntries = [header, ...pathWithoutLabels, ...labelEntries];\n\t\tthis.sessionId = newSessionId;\n\t\tthis._buildIndex();\n\t\treturn undefined;\n\t}\n\n\t/**\n\t * Create a new session.\n\t * @param cwd Working directory (stored in session header)\n\t * @param sessionDir Optional session directory. If omitted, uses default (~/.atomic/agent/sessions/<encoded-cwd>/).\n\t */\n\tstatic create(cwd: string, sessionDir?: string, options?: NewSessionOptions): SessionManager {\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : getDefaultSessionDir(cwd);\n\t\treturn new SessionManager(cwd, dir, undefined, true, options);\n\t}\n\n\t/**\n\t * Open a specific session file.\n\t * @param path Path to session file\n\t * @param sessionDir Optional session directory for /new or /branch. If omitted, derives from file's parent.\n\t * @param cwdOverride Optional cwd override instead of the session header cwd.\n\t */\n\tstatic open(path: string, sessionDir?: string, cwdOverride?: string): SessionManager {\n\t\tconst resolvedPath = resolvePath(path);\n\t\t// Extract cwd from session header if possible, otherwise use process.cwd()\n\t\tconst entries = loadEntriesFromFile(resolvedPath);\n\t\tconst header = entries.find((e) => e.type === \"session\") as SessionHeader | undefined;\n\t\tconst cwd = cwdOverride ?? header?.cwd ?? process.cwd();\n\t\t// If no sessionDir provided, derive from file's parent directory\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : resolve(resolvedPath, \"..\");\n\t\treturn new SessionManager(cwd, dir, resolvedPath, true);\n\t}\n\n\t/**\n\t * Continue the most recent session, or create new if none.\n\t * @param cwd Working directory\n\t * @param sessionDir Optional session directory. If omitted, uses default (~/.atomic/agent/sessions/<encoded-cwd>/).\n\t */\n\tstatic continueRecent(cwd: string, sessionDir?: string): SessionManager {\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : getDefaultSessionDir(cwd);\n\t\tconst filterCwd = sessionDir !== undefined && dir !== getDefaultSessionDirPath(cwd);\n\t\tconst mostRecent = findMostRecentSession(dir, filterCwd ? cwd : undefined);\n\t\tif (mostRecent) {\n\t\t\treturn new SessionManager(cwd, dir, mostRecent, true);\n\t\t}\n\t\treturn new SessionManager(cwd, dir, undefined, true);\n\t}\n\n\t/** Create an in-memory session (no file persistence) */\n\tstatic inMemory(cwd: string = process.cwd()): SessionManager {\n\t\treturn new SessionManager(cwd, \"\", undefined, false);\n\t}\n\n\t/**\n\t * Fork a session from another project directory into the current project.\n\t * Creates a new session in the target cwd with the full history from the source session.\n\t * @param sourcePath Path to the source session file\n\t * @param targetCwd Target working directory (where the new session will be stored)\n\t * @param sessionDir Optional session directory. If omitted, uses default for targetCwd.\n\t */\n\tstatic forkFrom(\n\t\tsourcePath: string,\n\t\ttargetCwd: string,\n\t\tsessionDir?: string,\n\t\toptions?: NewSessionOptions,\n\t): SessionManager {\n\t\tconst resolvedSourcePath = resolvePath(sourcePath);\n\t\tconst resolvedTargetCwd = resolvePath(targetCwd);\n\t\tconst sourceEntries = loadEntriesFromFile(resolvedSourcePath);\n\t\tif (sourceEntries.length === 0) {\n\t\t\tthrow new Error(`Cannot fork: source session file is empty or invalid: ${resolvedSourcePath}`);\n\t\t}\n\n\t\tconst sourceHeader = sourceEntries.find((e) => e.type === \"session\") as SessionHeader | undefined;\n\t\tif (!sourceHeader) {\n\t\t\tthrow new Error(`Cannot fork: source session has no header: ${resolvedSourcePath}`);\n\t\t}\n\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : getDefaultSessionDir(resolvedTargetCwd);\n\t\tif (!existsSync(dir)) {\n\t\t\tmkdirSync(dir, { recursive: true });\n\t\t}\n\n\t\t// Create new session file with new ID but forked content\n\t\tif (options?.id !== undefined) {\n\t\t\tassertValidSessionId(options.id);\n\t\t}\n\t\tconst newSessionId = options?.id ?? createSessionId();\n\t\tconst timestamp = new Date().toISOString();\n\t\tconst fileTimestamp = timestamp.replace(/[:.]/g, \"-\");\n\t\tconst newSessionFile = join(dir, `${fileTimestamp}_${newSessionId}.jsonl`);\n\n\t\t// Write new header pointing to source as parent, with updated cwd\n\t\tconst newHeader: SessionHeader = {\n\t\t\ttype: \"session\",\n\t\t\tversion: CURRENT_SESSION_VERSION,\n\t\t\tid: newSessionId,\n\t\t\ttimestamp,\n\t\t\tcwd: resolvedTargetCwd,\n\t\t\tparentSession: resolvedSourcePath,\n\t\t};\n\t\tappendFileSync(newSessionFile, `${JSON.stringify(newHeader)}\\n`);\n\n\t\t// Copy all non-header entries from source\n\t\tfor (const entry of sourceEntries) {\n\t\t\tif (entry.type !== \"session\") {\n\t\t\t\tappendFileSync(newSessionFile, `${JSON.stringify(entry)}\\n`);\n\t\t\t}\n\t\t}\n\n\t\treturn new SessionManager(resolvedTargetCwd, dir, newSessionFile, true);\n\t}\n\n\t/**\n\t * List all sessions for a directory.\n\t * @param cwd Working directory (used to compute default session directory)\n\t * @param sessionDir Optional session directory. If omitted, uses default (~/.atomic/agent/sessions/<encoded-cwd>/).\n\t * @param onProgress Optional callback for progress updates (loaded, total)\n\t */\n\tstatic async list(cwd: string, sessionDir?: string, onProgress?: SessionListProgress): Promise<SessionInfo[]> {\n\t\tconst dir = sessionDir ? normalizePath(sessionDir) : getDefaultSessionDir(cwd);\n\t\tconst filterCwd = sessionDir !== undefined && dir !== getDefaultSessionDirPath(cwd);\n\t\tconst resolvedCwd = resolvePath(cwd);\n\t\tconst sessions = (await listSessionsFromDir(dir, onProgress)).filter(\n\t\t\t(session) => !filterCwd || sessionCwdMatches(session.cwd, resolvedCwd),\n\t\t);\n\t\tsessions.sort((a, b) => b.modified.getTime() - a.modified.getTime());\n\t\treturn sessions;\n\t}\n\n\t/**\n\t * List all sessions across all project directories.\n\t * @param onProgress Optional callback for progress updates (loaded, total)\n\t */\n\tstatic async listAll(onProgress?: SessionListProgress): Promise<SessionInfo[]>;\n\tstatic async listAll(sessionDir?: string, onProgress?: SessionListProgress): Promise<SessionInfo[]>;\n\tstatic async listAll(\n\t\tsessionDirOrOnProgress?: string | SessionListProgress,\n\t\tonProgress?: SessionListProgress,\n\t): Promise<SessionInfo[]> {\n\t\tconst customSessionDir =\n\t\t\ttypeof sessionDirOrOnProgress === \"string\" ? normalizePath(sessionDirOrOnProgress) : undefined;\n\t\tconst progress = typeof sessionDirOrOnProgress === \"function\" ? sessionDirOrOnProgress : onProgress;\n\t\tif (customSessionDir) {\n\t\t\tconst sessions = await listSessionsFromDir(customSessionDir, progress);\n\t\t\tsessions.sort((a, b) => b.modified.getTime() - a.modified.getTime());\n\t\t\treturn sessions;\n\t\t}\n\n\t\tconst sessionsDir = getSessionsDir();\n\n\t\ttry {\n\t\t\tif (!existsSync(sessionsDir)) {\n\t\t\t\treturn [];\n\t\t\t}\n\t\t\tconst entries = await readdir(sessionsDir, { withFileTypes: true });\n\t\t\tconst dirs = entries.filter((e) => e.isDirectory()).map((e) => join(sessionsDir, e.name));\n\n\t\t\t// Count total files first for accurate progress\n\t\t\tlet totalFiles = 0;\n\t\t\tconst dirFiles: string[][] = [];\n\t\t\tfor (const dir of dirs) {\n\t\t\t\ttry {\n\t\t\t\t\tconst files = (await readdir(dir)).filter((f) => f.endsWith(\".jsonl\"));\n\t\t\t\t\tdirFiles.push(files.map((f) => join(dir, f)));\n\t\t\t\t\ttotalFiles += files.length;\n\t\t\t\t} catch {\n\t\t\t\t\tdirFiles.push([]);\n\t\t\t\t}\n\t\t\t}\n\n\t\t\t// Process all files with progress tracking\n\t\t\tlet loaded = 0;\n\t\t\tconst sessions: SessionInfo[] = [];\n\t\t\tconst allFiles = dirFiles.flat();\n\n\t\t\tconst results = await Promise.all(\n\t\t\t\tallFiles.map(async (file) => {\n\t\t\t\t\tconst info = await buildSessionInfo(file);\n\t\t\t\t\tloaded++;\n\t\t\t\t\tprogress?.(loaded, totalFiles);\n\t\t\t\t\treturn info;\n\t\t\t\t}),\n\t\t\t);\n\n\t\t\tfor (const info of results) {\n\t\t\t\tif (info) {\n\t\t\t\t\tsessions.push(info);\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tsessions.sort((a, b) => b.modified.getTime() - a.modified.getTime());\n\t\t\treturn sessions;\n\t\t} catch {\n\t\t\treturn [];\n\t\t}\n\t}\n}\n"]}
package/dist/core/settings-manager.d.ts CHANGED
@@ -2,6 +2,9 @@ import type { Transport } from "@earendil-works/pi-ai";
2
2
  export interface CompactionSettings {
3
3
  enabled?: boolean;
4
4
  reserveTokens?: number;
5
+ compression_ratio?: number;
6
+ preserve_recent?: number;
7
+ query?: string;
5
8
  }
6
9
  export interface BranchSummarySettings {
7
10
  reserveTokens?: number;
@@ -201,9 +204,15 @@ export declare class SettingsManager {
201
204
  getCompactionEnabled(): boolean;
202
205
  setCompactionEnabled(enabled: boolean): void;
203
206
  getCompactionReserveTokens(): number;
207
+ getCompactionCompressionRatio(): number;
208
+ getCompactionPreserveRecent(): number;
209
+ getCompactionQuery(): string | undefined;
204
210
  getCompactionSettings(): {
205
211
  enabled: boolean;
206
212
  reserveTokens: number;
213
+ compression_ratio: number;
214
+ preserve_recent: number;
215
+ query?: string;
207
216
  };
208
217
  getBranchSummarySettings(): {
209
218
  reserveTokens: number;