@barivia/barsom-mcp 0.7.3 → 0.7.6

package/README.md

@@ -1,6 +1,6 @@
 # @barivia/barsom-mcp
 
-MCP proxy for the Barivia Analytics Engine -- connects any stdio MCP client (Cursor, Claude Desktop, etc.) to the barSOM cloud API. It implements a **Progressive Disclosure** architecture, exposing a `guide_barsom_workflow` top-level SOP tool and comprehensive `jobs` (`train_map`, `train_siom_map`, `train_floop_chain`, status/compare), `results`, `project`, and `inference` capabilities, following 2026 enterprise MCP best practices.
+MCP proxy for the Barivia Analytics Engine — connects any stdio MCP client (Cursor, Claude Desktop, etc.) to the barSOM cloud API. **`guide_barsom_workflow`** is the canonical bootstrap: it returns how the proxy works (env, tool map, async polling, training modes) and the step-by-step SOP. Core tools are `datasets`, `jobs` (`train_map`, `train_siom_map`, `train_floop_siom`; `train_floop_chain` is deprecated), `results`, and `inference`. **Optional MCP App tools** (`training_prep`, `training_monitor`, `results_explorer` / `explore_map`) add embedded or localhost viz; they are **not required** to complete upload → train → poll → results.
 
 ## Installation
 
@@ -33,22 +33,23 @@ This is the standard pattern for MCP servers distributed as npm packages (same a
 
 Legacy `BARSOM_API_KEY` / `BARSOM_API_URL` / `BARSOM_WORKSPACE_ROOT` are also accepted as fallbacks.
 
-## Tools (13 + MCP App)
+## Tools (14 registrations)
 
 All multi-action tools follow the `datasets` pattern: a required `action` enum routes to the correct operation.
 
 ### `guide_barsom_workflow`
-SOP dispatch. Call this first if unsure of the workflow. No parameters.
+Call at the **start of mapping work** (or when the user asks what the MCP can do). Returns **proxy and capabilities** (stdio → REST, `BARIVIA_*` env, tool map, async contract, SOM vs SIOM vs FLooP-SIOM, optional MCP Apps) and the **Workflow (SOP)**. No parameters.
 
 ### `datasets(action)`
 
 | Action | Use when |
 |--------|----------|
 | `upload` | Adding a new CSV — returns dataset_id |
-| `preview` | Before jobs(action=train_map), jobs(action=train_siom_map), or jobs(action=train_floop_chain) — inspect columns, stats, cyclic/datetime hints |
+| `preview` | Before training — inspect columns, stats, cyclic/datetime hints |
+| `analyze` | Pre-training recommendations (correlation, columns to consider dropping, etc.) |
 | `list` | Finding dataset IDs |
 | `subset` | Creating a filtered/sliced copy (row_range, filter conditions) |
-| `add_expression` | Add a derived column from an expression (same as project(expression) without project_onto_job) |
+| `add_expression` | Add a derived column from an expression (formula → new column on the dataset) |
 | `delete` | Removing a dataset |
 
 ### `jobs(action)`
@@ -57,12 +58,15 @@ SOP dispatch. Call this first if unsure of the workflow. No parameters.
 |--------|----------|
 | `train_map` | Submitting a new map training job — full control: model type, grid, epochs, cyclic/temporal features, transforms. Returns `job_id`; poll with `jobs(action=status, job_id=...)`. |
 | `train_siom_map` | Submitting a self-interacting map training job — same grid-map workflow plus SIOM controls such as `gamma`, `siom_decay`, and penalty selection. |
-| `train_floop_chain` | Submitting a FLooP-SIOM training job — use when you want a growing chain or free-topology manifold instead of a fixed 2D grid. |
+| `train_floop_siom` | Submitting a FLooP-SIOM job — growing node-budget manifold; default `topology=free` (CHL); optional `topology=chain` for strict 1D linked list. |
+| `train_floop_chain` | Deprecated alias for `train_floop_siom` — same behavior. |
 | `status` | Polling after any async job — every 10–15s |
 | `list` | Finding job IDs, checking pipeline state |
 | `compare` | Picking the best run from a set (QE, TE, silhouette table) |
 | `cancel` | Stopping a running job |
 | `delete` | Permanently removing a job + its S3 files |
+| `batch_predict` | Submit multiple predict jobs from one parent training job |
+| `run_baseline_study` | Auto-configured baseline SOM for a dataset |
 
 ### `results(action)`
 
@@ -74,23 +78,17 @@ SOP dispatch. Call this first if unsure of the workflow. No parameters.
 | `recolor` | async | Changing colormap or output format without retraining |
 | `transition_flow` | async | Temporal state transition analysis on time-ordered data |
 
-All visualizations and metrics come from **`results(action=get)`**. Grid-map jobs return combined map figures, component planes, and quality metrics; FLooP-SIOM jobs return chain-structure figures, occupation/profile views, and chain metrics. Use `figures=all` or `export_type=...` for more. There is no separate `analyze` tool.
-
-### `project(action)`
-
-| Action | Use when |
-|--------|----------|
-| `expression` | Computing a derived variable from a formula (`revenue / cost`, `diff(temp)`, rolling stats) — add to dataset or project onto the map |
-| `values` | Projecting a pre-computed external array (anomaly scores, labels from another system) onto the map |
+All visualizations and metrics come from **`results(action=get)`**. Grid-map jobs return combined map figures, component planes, and quality metrics; FLooP-SIOM jobs return structure/coverage figures, occupation/profile views, and metrics. Use `figures=all` or `export_type=...` for more. There is no separate `analyze` tool.
 
 ### `inference(action)`
-All actions use a frozen trained map — no retraining. All are async.
+All actions use a frozen trained map — no retraining. Derived columns use **`datasets(action=add_expression)`**; overlaying columns on the map uses **`inference(action=project_columns)`**.
 
 | Action | Output | Timing |
 |--------|--------|--------|
 | `predict` | predictions.csv: per-row bmu_x/y, cluster_id, quantization_error, potential_anomaly (QE > 95th pct); summary includes qe_p95 | 5–120s |
 | `enrich` | enriched.csv: training data + bmu_x/y/node_index/cluster_id | 5–60s |
 | `compare` | density-diff heatmap + top gained/lost nodes — drift, A/B, cohort | 30–120s |
+| `project_columns` | Project one or more dataset columns onto the trained map (component planes) | async |
 | `report` | comprehensive PDF: metrics, views, component grid, cluster table | 30–180s |
 
 ### `account(action)`
@@ -104,8 +102,17 @@ All actions use a frozen trained map — no retraining. All are async.
 | `history` | Viewing recent compute usage and spend |
 | `add_funds` | Getting instructions to add credits |
 
-### `explore_map` (MCP App)
-Interactive inline map explorer — clickable nodes, feature toggles, export controls.
+### MCP App tools (optional UIs)
+
+| Tool | Role |
+|------|------|
+| `training_prep` | Review variables, transforms, hyperparameters before submit; use with `submit_prepared_training` |
+| `training_monitor` | Visual progress for a `job_id`; optional — `jobs(action=status)` is enough |
+| `results_explorer` | Browse metrics and figures after training completes |
+| `explore_map` | Legacy alias of `results_explorer` |
+| `_fetch_figure` | Internal helper for Results Explorer (single figure as image) |
+
+When the client does not advertise MCP Apps support, the proxy starts **`viz-server`** on `127.0.0.1` and tool responses can include `http://localhost:PORT/viz/...` links.
 
 ### `send_feedback`
 Submit feedback or feature requests (max 1400 characters, ~190 words).
@@ -121,7 +128,7 @@ When adding or refining tools, follow [MCP best practices](https://modelcontextp
 
 ## Data preparation
 
-To train on a subset of your data (e.g. first 2000 rows, or rows where region=Europe) without re-uploading: use **datasets(action=subset)** with `row_range` and/or `filter` to create a new dataset, then train with **jobs(action=train_map, dataset_id=...)**, **jobs(action=train_siom_map, dataset_id=...)**, or **jobs(action=train_floop_chain, dataset_id=...)** on the new dataset_id; or pass **row_range** in the training job params for a one-off slice.
+To train on a subset of your data (e.g. first 2000 rows, or rows where region=Europe) without re-uploading: use **datasets(action=subset)** with `row_range` and/or `filter` to create a new dataset, then train with **jobs(action=train_map, dataset_id=...)**, **jobs(action=train_siom_map, dataset_id=...)**, or **jobs(action=train_floop_siom, dataset_id=...)** on the new dataset_id; or pass **row_range** in the training job params for a one-off slice.
 
 ## How It Works
 

package/dist/index.js

@@ -1,2 +1,2 @@
 #!/usr/bin/env node
-import{McpServer as e}from"@modelcontextprotocol/sdk/server/mcp.js";import{StdioServerTransport as t}from"@modelcontextprotocol/sdk/server/stdio.js";import{z as o}from"zod";import{getUiCapability as a,registerAppResource as i,RESOURCE_MIME_TYPE as r}from"@modelcontextprotocol/ext-apps/server";import{startVizServer as n}from"./viz-server.js";import{API_KEY as s,apiCall as c,apiRawCall as l,loadViewHtml as d,setVizPort as p,setClientSupportsMcpApps as m}from"./shared.js";import{registerDatasetsTool as u}from"./tools/datasets.js";import{registerJobsTool as g,JOBS_DESCRIPTION_BASE as f}from"./tools/jobs.js";import{registerResultsTool as h}from"./tools/results.js";import{registerExploreMapTool as _,RESULTS_EXPLORER_URI as b}from"./tools/explore_map.js";import{registerAccountTool as y}from"./tools/account.js";import{registerInferenceTool as w}from"./tools/inference.js";import{registerGuideBarsomTool as j}from"./tools/guide_barsom.js";import{registerTrainingGuidanceTool as v}from"./tools/training_guidance.js";import{registerFeedbackTool as x}from"./tools/feedback.js";import{registerTrainingPrepTools as k,TRAINING_PREP_URI as I}from"./tools/training_prep.js";s||(console.error("Error: BARIVIA_API_KEY not set. Set it in your MCP client config."),process.exit(1));const M=new e({name:"analytics-engine",version:"0.6.3",instructions:"# Barivia Mapping Analytics Engine\n\nYou have access to a mapping (Self-Organizing Map) analytics platform that projects high-dimensional data onto a 2D grid, revealing clusters, gradients, and anomalies.\n\n## Typical workflow\n\n1. **Upload** → `datasets(action=upload)` — ingest a CSV\n2. **Preview** → `datasets(action=preview)` — inspect columns, detect cyclics/datetimes; add derived columns with `datasets(action=add_expression)` if needed\n3. **Train** → choose one:\n   - `jobs(action=train_map, dataset_id=...)` for a standard fixed-grid SOM\n   - `jobs(action=train_siom_map, dataset_id=...)` for a fixed-grid SIOM with coverage regularization\n   - `jobs(action=train_floop_chain, dataset_id=...)` for a growing FLooP-SIOM chain/free-topology manifold\n   Returns a job_id; poll `jobs(action=status, job_id=...)` until completed\n4. **Analyze** → `results(action=get)` — view metrics and figures (grid-map or chain-specific; no separate analyze tool)\n5. **Compare / Export / Inference** → `jobs(action=compare)`, `results(download)`, `inference` (predict/enrich/compare/report)\n\nFor the full step-by-step procedure, call `guide_barsom_workflow`.\n\n## Tool categories\n\n| Category | Tools |\n|----------|-------|\n| Data management | `datasets` (upload/preview/list/subset/delete/add_expression) |\n| Jobs & training | `jobs` (train_map/train_siom_map/train_floop_chain/status/list/compare/cancel/delete/batch_predict) |\n| Results | `results` (get/recolor/download/export/transition_flow) |\n| Inference & export | `inference` (predict/enrich/compare/report/project_columns) |\n| Account | `account` (status/request_compute/compute_status/release_compute/history/add_funds) |\n| Utility | `guide_barsom_workflow`, `results_explorer`, `training_prep`, `send_feedback` |\n\n## Async job pattern\n\nMost operations are async. Every tool that submits a job either:\n- **Auto-polls** (results(recolor/transition_flow), inference) — waits up to the action-specific timeout then returns or gives a job_id for manual polling\n- **Returns immediately** (jobs(action=train_map/train_siom_map/train_floop_chain)) — always requires manual `jobs(action=status, job_id=...)` polling\n\n**Do not tell the user a job failed because it is still running.** If a tool returns a job_id, poll `jobs(action=status)` every 10–15 seconds. Grid-map training takes 30s–10min depending on grid size and dataset; FLooP-SIOM jobs can also take several minutes for larger `max_nodes` or `thorough` runs.\nFor FLooP-SIOM, `max_nodes` is a total node budget, not a grid side length. If omitted, the backend uses a dataset-size heuristic; reduce `max_nodes` before increasing `effort` when coverage looks collapsed.\n\n## Credit and cost\n\nJobs consume compute credits. Inference jobs are priced the same as projection jobs. Check `account(action=status)` to see the remaining balance and queue depth before starting large jobs.\n\n## Key constraints\n\n- For parameter guidance (grid, epochs, presets, when to use standard SOM vs SIOM vs FLooP-SIOM), use `training_guidance` or `prepare_training` — do not guess.\n- Column names are case-sensitive; always match exactly what `datasets(action=preview)` returns\n- Uploads may include text/categorical columns, but the default training path is still numeric/cyclic/temporal. If a categorical column truly matters, use explicit `categorical_features` for simple baseline encoding.\n- `predict` input must match the model's supported inference contract. Numeric/batch predict expects the training feature set; single-row stateless inference can also accept raw categorical strings for baseline `categorical_features` models."}),S="ui://barsom/training-monitor";i(M,b,b,{mimeType:r},async()=>{const e=await d("results-explorer");return{contents:[{uri:b,mimeType:r,text:e??"<html><body>Results Explorer view not built yet. Run: npm run build:views</body></html>"}]}}),i(M,I,I,{mimeType:r},async()=>{const e=await d("training-prep");return{contents:[{uri:I,mimeType:r,text:e??"<html><body>Training Preparation view not built yet.</body></html>"}]}}),i(M,S,S,{mimeType:r},async()=>{const e=await d("training-monitor");return{contents:[{uri:S,mimeType:r,text:e??"<html><body>Training Monitor view not built yet.</body></html>"}]}}),_(M),k(M),j(M),u(M),g(M,f),h(M),y(M),w(M),v(M),x(M),M.prompt("info","Overview of the Barivia Mapping MCP: capabilities, workflow, tools, analysis types, and tips. Use when the user asks what this MCP can do, how to get started, or what the process is.",{},()=>({messages:[{role:"user",content:{type:"text",text:["Inform the user using this overview:","","**What it is:** Barivia MCP connects you to a mapping analytics engine that learns a 2D map from high-dimensional data for visualization, clustering, pattern discovery, and temporal analysis.","","**Core workflow:**","0. **Prepare** — CSV with header; no NaNs in used columns; numeric and datetime columns are the default training path; raw categoricals can stay in the CSV but should usually be excluded unless you explicitly use simple `categorical_features` encoding","1. **Upload** — `datasets(action=upload)` with a CSV file path or inline data","2. **Preview** — `datasets(action=preview)` to inspect columns, stats, and detect cyclic/datetime fields","3. **Prepare** — use the `prepare_training` prompt for a guided checklist (column selection, transforms, cyclic encoding, feature weights, grid sizing)","4. **Train** — choose one: `jobs(action=train_map, dataset_id=...)` for a standard fixed-grid SOM, `jobs(action=train_siom_map, dataset_id=...)` for a fixed-grid SIOM with coverage regularization, or `jobs(action=train_floop_chain, dataset_id=...)` for a growing FLooP-SIOM chain/free-topology manifold. Use `preset=quick|standard|refined|high_res` for standard or SIOM map defaults","5. **Monitor** — `jobs(action=status, job_id=...)` to track progress; `results(action=get, job_id=...)` to retrieve figures when complete","6. **View and interpret** — `results(action=get)` returns metrics and figures. Grid-map jobs show U-matrix, component planes, and clusters; FLooP-SIOM jobs show chain structure, occupation/profile views, and chain metrics. Use `results(action=export)` or `results(action=download)` for more.","7. **Feedback** — Ask the user if they'd like to submit feedback via `send_feedback` based on their experience.","8. **Iterate** — `results(action=recolor)` to change colormap, `jobs(action=compare)` to compare hyperparameters, `inference(action=project_columns)` to overlay dataset columns onto the map","","All visualizations and metrics come from `results(action=get)`; use figures=all or export_type=... for more.","","**Data tools:**","- `datasets(action=subset)` — filter by row range, value thresholds (gt/lt/gte/lte), equality, or set membership. Combine row_range + filter","- `datasets(action=add_expression)` — create computed columns from expressions (ratios, differences, etc.)","- `inference(action=project_columns)` — overlay one or more dataset columns onto a trained map (component planes)","","**Output options:** Format (png/pdf/svg) and colormap (coolwarm, viridis, plasma, inferno, hsv, twilight, etc.) can be set at training or changed later via results(action=recolor).","","**Key tools:** datasets, jobs (train_map/train_siom_map/train_floop_chain/status/list/...), results, inference (predict/enrich/compare/project_columns/report), account, guide_barsom_workflow, training_prep, results_explorer.","","**Tips:**","- For the full step-by-step SOP, use the `guide_barsom_workflow` tool","- Always `datasets(action=preview)` before training to understand your data","- Use `account(action=status)` to check GPU availability, queue depth, and plan limits before large jobs","- Start with `preset=quick` for fast iteration, then `refined` for publication quality","- For time-series data, consider `transition_flow` after training","","Keep the reply scannable with headers and bullet points."].join("\n")}}]})),M.prompt("prepare_training","Guided pre-training checklist. Use after uploading a dataset and before calling jobs(action=train_map), jobs(action=train_siom_map), or jobs(action=train_floop_chain). Walks through data inspection, column selection, transforms, cyclic/temporal features, weighting, subsetting, and grid sizing.",{dataset_id:o.string().describe("Dataset ID to prepare for training")},async({dataset_id:e})=>{let t=`Please run datasets(action=preview, dataset_id="${e}") to inspect columns, then datasets(action=analyze, dataset_id="${e}") to see which columns and temporal periods are most informative. Then choose the training path: jobs(action=train_map, dataset_id="${e}", ...) for a standard fixed-grid SOM, jobs(action=train_siom_map, dataset_id="${e}", ...) for a fixed-grid SIOM, or jobs(action=train_floop_chain, dataset_id="${e}", ...) for a growing FLooP-SIOM chain/free-topology manifold.`;try{const o=await c("GET",`/v1/docs/prepare_training?dataset_id=${e}`);o.prompt&&(t=o.prompt)}catch(e){}return{messages:[{role:"user",content:{type:"text",text:t}}]}});const O=new t;(async function(){try{const e=await n(c,l,d);p(e)}catch(e){process.env.BARIVIA_VIZ_PORT&&console.error("Barivia viz server failed to start:",e)}const e=M.server;e.oninitialized=()=>{const t=e.getClientCapabilities(),o=a(t);m(!!o?.mimeTypes?.includes(r))},await M.connect(O)})().catch(console.error);
+import{McpServer as e}from"@modelcontextprotocol/sdk/server/mcp.js";import{StdioServerTransport as t}from"@modelcontextprotocol/sdk/server/stdio.js";import{z as o}from"zod";import{getUiCapability as a,registerAppResource as i,RESOURCE_MIME_TYPE as r}from"@modelcontextprotocol/ext-apps/server";import{startVizServer as n}from"./viz-server.js";import{API_KEY as s,apiCall as c,apiRawCall as l,loadViewHtml as p,setVizPort as d,setClientSupportsMcpApps as m}from"./shared.js";import{registerDatasetsTool as u}from"./tools/datasets.js";import{registerJobsTool as g,JOBS_DESCRIPTION_BASE as f}from"./tools/jobs.js";import{registerResultsTool as _}from"./tools/results.js";import{registerExploreMapTool as h,RESULTS_EXPLORER_URI as b}from"./tools/explore_map.js";import{registerAccountTool as y}from"./tools/account.js";import{registerInferenceTool as w}from"./tools/inference.js";import{registerGuideBarsomTool as j}from"./tools/guide_barsom.js";import{registerTrainingGuidanceTool as v}from"./tools/training_guidance.js";import{registerFeedbackTool as x}from"./tools/feedback.js";import{registerTrainingPrepTools as I,TRAINING_PREP_URI as k}from"./tools/training_prep.js";import{registerTrainingMonitorTool as M,TRAINING_MONITOR_URI as O}from"./tools/training_monitor.js";s||(console.error("Error: BARIVIA_API_KEY not set. Set it in your MCP client config."),process.exit(1));const P=new e({name:"analytics-engine",version:"0.7.6",instructions:"# Barivia Mapping Analytics Engine\n\nYou have access to a mapping (Self-Organizing Map) analytics platform that projects high-dimensional data onto a 2D grid, revealing clusters, gradients, and anomalies.\n\n## Typical workflow\n\n1. **Upload** → `datasets(action=upload)` — ingest a CSV\n2. **Preview** → `datasets(action=preview)` — inspect columns, detect cyclics/datetimes; add derived columns with `datasets(action=add_expression)` if needed\n3. **Train** → choose one:\n   - `jobs(action=train_map, dataset_id=...)` for a standard fixed-grid SOM\n   - `jobs(action=train_siom_map, dataset_id=...)` for a fixed-grid SIOM with coverage regularization\n   - `jobs(action=train_floop_siom, dataset_id=...)` for FLooP-SIOM (default topology=free / CHL; optional topology=chain)\n   Returns a job_id; poll `jobs(action=status, job_id=...)` until completed\n4. **Analyze** → `results(action=get)` — view metrics and figures (grid-map or FLooP-specific; no separate analyze tool)\n5. **Compare / Export / Inference** → `jobs(action=compare)`, `results(download)`, `inference` (predict/enrich/compare/report)\n\nFor **proxy model, full tool map, async rules, training modes, and optional MCP App UIs**, call `guide_barsom_workflow` first—it is the ground-truth bootstrap (this section stays short on purpose).\n\n## Tool categories\n\n| Category | Tools |\n|----------|-------|\n| Data management | `datasets` (upload/preview/list/subset/delete/add_expression) |\n| Jobs & training | `jobs` (train_map/train_siom_map/train_floop_siom/status/list/compare/cancel/delete/batch_predict; deprecated alias train_floop_chain) |\n| Results | `results` (get/recolor/download/export/transition_flow) |\n| Inference & export | `inference` (predict/enrich/compare/report/project_columns) |\n| Account | `account` (status/request_compute/compute_status/release_compute/history/add_funds) |\n| Utility | `guide_barsom_workflow`, `training_guidance`, `training_prep`, `results_explorer`, `training_monitor`, `send_feedback` |\n\n## Optional rich UI (MCP Apps)\n\n**None of these are required** to train, poll, or read results—`jobs` + `results` + text output are enough. **Recommended** for learning: `training_prep` (preparation), `results_explorer` (postprocessing). **Optional:** `training_monitor(job_id)` for visual progress; `jobs(action=status)` is sufficient without it.\n\n## Async job pattern\n\nMost operations are async. Every tool that submits a job either:\n- **Auto-polls** (results(recolor/transition_flow), inference) — waits up to the action-specific timeout then returns or gives a job_id for manual polling\n- **Returns immediately** (jobs(action=train_map/train_siom_map/train_floop_siom)) — always requires manual `jobs(action=status, job_id=...)` polling (`train_floop_chain` is a deprecated alias for `train_floop_siom`)\n\n**Do not tell the user a job failed because it is still running.** If a tool returns a job_id, poll `jobs(action=status)` every 10–15 seconds. Grid-map training takes 30s–10min depending on grid size and dataset; FLooP-SIOM jobs can also take several minutes for larger `max_nodes` or `thorough` runs.\nFor FLooP-SIOM, `max_nodes` is a total node budget, not a grid side length. If omitted, the backend uses a dataset-size heuristic; reduce `max_nodes` before increasing `effort` when coverage looks collapsed.\n\n## Credit and cost\n\nJobs consume compute credits. Inference jobs are priced the same as projection jobs. Check `account(action=status)` to see the remaining balance and queue depth before starting large jobs.\n\n## Key constraints\n\n- For parameter guidance (grid, epochs, presets, when to use standard SOM vs SIOM vs FLooP-SIOM), use `training_guidance` or `prepare_training` — do not guess.\n- Column names are case-sensitive; always match exactly what `datasets(action=preview)` returns\n- Uploads may include text/categorical columns, but the default training path is still numeric/cyclic/temporal. If a categorical column truly matters, use explicit `categorical_features` for simple baseline encoding.\n- `predict` input must match the model's supported inference contract. Numeric/batch predict expects the training feature set; single-row stateless inference can also accept raw categorical strings for baseline `categorical_features` models."});i(P,b,b,{mimeType:r},async()=>{const e=await p("results-explorer");return{contents:[{uri:b,mimeType:r,text:e??"<html><body>Results Explorer view not built yet. Run: npm run build:views</body></html>"}]}}),i(P,k,k,{mimeType:r},async()=>{const e=await p("training-prep");return{contents:[{uri:k,mimeType:r,text:e??"<html><body>Training Preparation view not built yet.</body></html>"}]}}),i(P,O,O,{mimeType:r},async()=>{const e=await p("training-monitor");return{contents:[{uri:O,mimeType:r,text:e??"<html><body>Training Monitor view not built yet.</body></html>"}]}}),h(P),I(P),M(P),j(P),u(P),g(P,f),_(P),y(P),w(P),v(P),x(P),P.prompt("info","Overview of the Barivia Mapping MCP: capabilities, workflow, tools, analysis types, and tips. Use when the user asks what this MCP can do, how to get started, or what the process is.",{},()=>({messages:[{role:"user",content:{type:"text",text:["Inform the user using this overview:","","**What it is:** Barivia MCP connects you to a mapping analytics engine that learns a 2D map from high-dimensional data for visualization, clustering, pattern discovery, and temporal analysis.","","**Orientation:** Call `guide_barsom_workflow` first for proxy model, full tool list, async rules, training modes, and optional MCP App UIs (defer long-form detail there).","","**Core workflow:**","0. **Prepare** — CSV with header; no NaNs in used columns; numeric and datetime columns are the default training path; raw categoricals can stay in the CSV but should usually be excluded unless you explicitly use simple `categorical_features` encoding","1. **Upload** — `datasets(action=upload)` with a CSV file path or inline data","2. **Preview** — `datasets(action=preview)` to inspect columns, stats, and detect cyclic/datetime fields","3. **Prepare** — use the `prepare_training` prompt for a guided checklist (column selection, transforms, cyclic encoding, feature weights, grid sizing)","4. **Train** — choose one: `jobs(action=train_map, dataset_id=...)` for a standard fixed-grid SOM, `jobs(action=train_siom_map, dataset_id=...)` for a fixed-grid SIOM with coverage regularization, or `jobs(action=train_floop_siom, dataset_id=...)` for FLooP-SIOM (default topology=free / CHL; optional topology=chain). Use `preset=quick|standard|refined|high_res` for standard or SIOM map defaults","5. **Monitor** — `jobs(action=status, job_id=...)` every 10–15s until complete (required path). Optional: `training_monitor(job_id=...)` for a visual panel—not required.","6. **View and interpret** — `results(action=get)` returns metrics and figures. Grid-map jobs show U-matrix, component planes, and clusters; FLooP-SIOM jobs show structure/coverage, occupation/profile views, and metrics. Optional: `results_explorer(job_id=...)` for interactive browsing; `results(action=get)` alone is enough.","7. **Feedback** — Ask the user if they'd like to submit feedback via `send_feedback` based on their experience.","8. **Iterate** — `results(action=recolor)` to change colormap, `jobs(action=compare)` to compare hyperparameters, `inference(action=project_columns)` to overlay dataset columns onto the map","","All visualizations and metrics come from `results(action=get)`; use figures=all or export_type=... for more.","","**Data tools:**","- `datasets(action=subset)` — filter by row range, value thresholds (gt/lt/gte/lte), equality, or set membership. Combine row_range + filter","- `datasets(action=add_expression)` — create computed columns from expressions (ratios, differences, etc.)","- `inference(action=project_columns)` — overlay one or more dataset columns onto a trained map (component planes)","","**Output options:** Format (png/pdf/svg) and colormap (coolwarm, viridis, plasma, inferno, hsv, twilight, etc.) can be set at training or changed later via results(action=recolor).","","**Key tools:** datasets, jobs (train_map/train_siom_map/train_floop_siom/status/list/...), results, inference (predict/enrich/compare/project_columns/report), account, guide_barsom_workflow, training_guidance, training_prep, results_explorer, training_monitor.","","**Optional rich UI:** `training_prep` and `results_explorer` are recommended for prep and postprocessing; `training_monitor` is optional. None are required—`jobs` + `results` complete the workflow.","","**Tips:**","- For the full step-by-step SOP and capabilities text, use the `guide_barsom_workflow` tool","- Always `datasets(action=preview)` before training to understand your data","- Use `account(action=status)` to check GPU availability, queue depth, and plan limits before large jobs","- Start with `preset=quick` for fast iteration, then `refined` for publication quality","- For time-series data, consider `transition_flow` after training","","Keep the reply scannable with headers and bullet points."].join("\n")}}]})),P.prompt("prepare_training","Guided pre-training checklist. Use after uploading a dataset and before calling jobs(action=train_map), jobs(action=train_siom_map), or jobs(action=train_floop_siom). Walks through data inspection, column selection, transforms, cyclic/temporal features, weighting, subsetting, and grid sizing.",{dataset_id:o.string().describe("Dataset ID to prepare for training")},async({dataset_id:e})=>{let t=`Please run datasets(action=preview, dataset_id="${e}") to inspect columns, then datasets(action=analyze, dataset_id="${e}") to see which columns and temporal periods are most informative. Then choose the training path: jobs(action=train_map, dataset_id="${e}", ...) for a standard fixed-grid SOM, jobs(action=train_siom_map, dataset_id="${e}", ...) for a fixed-grid SIOM, or jobs(action=train_floop_siom, dataset_id="${e}", ...) for FLooP-SIOM (default topology=free / CHL; optional topology=chain).`;try{const o=await c("GET",`/v1/docs/prepare_training?dataset_id=${e}`);o.prompt&&(t=o.prompt)}catch(e){}return{messages:[{role:"user",content:{type:"text",text:t}}]}});const C=new t;(async function(){try{const e=await n(c,l,p);d(e)}catch(e){process.env.BARIVIA_VIZ_PORT&&console.error("Barivia viz server failed to start:",e)}const e=P.server;e.oninitialized=()=>{const t=e.getClientCapabilities(),o=a(t);m(!!o?.mimeTypes?.includes(r))},await P.connect(C)})().catch(console.error);

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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";AAEA;;;;;;;;;;;;;;;;;;;;;GAqBG;AAEH,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AACpE,OAAO,EAAE,oBAAoB,EAAE,MAAM,2CAA2C,CAAC;AACjF,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAAE,eAAe,EAAE,mBAAmB,EAAE,kBAAkB,EAAE,MAAM,uCAAuC,CAAC;AACjH,OAAO,EAAE,cAAc,EAAE,MAAM,iBAAiB,CAAC;AACjD,OAAO,EACL,OAAO,EACP,OAAO,EACP,UAAU,EACV,YAAY,EACZ,UAAU,EACV,wBAAwB,GACzB,MAAM,aAAa,CAAC;AACrB,OAAO,EAAE,oBAAoB,EAAE,MAAM,qBAAqB,CAAC;AAC3D,OAAO,EAAE,gBAAgB,EAAE,qBAAqB,EAAE,MAAM,iBAAiB,CAAC;AAC1E,OAAO,EAAE,mBAAmB,EAAE,MAAM,oBAAoB,CAAC;AACzD,OAAO,EAAE,sBAAsB,EAAE,oBAAoB,EAAE,MAAM,wBAAwB,CAAC;AACtF,OAAO,EAAE,mBAAmB,EAAE,MAAM,oBAAoB,CAAC;AACzD,OAAO,EAAE,qBAAqB,EAAE,MAAM,sBAAsB,CAAC;AAC7D,OAAO,EAAE,uBAAuB,EAAE,MAAM,yBAAyB,CAAC;AAClE,OAAO,EAAE,4BAA4B,EAAE,MAAM,8BAA8B,CAAC;AAC5E,OAAO,EAAE,oBAAoB,EAAE,MAAM,qBAAqB,CAAC;AAC3D,OAAO,EAAE,yBAAyB,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AACxF,OAAO,EAAE,2BAA2B,EAAE,oBAAoB,EAAE,MAAM,6BAA6B,CAAC;AAEhG,8EAA8E;AAC9E,eAAe;AACf,8EAA8E;AAE9E,IAAI,CAAC,OAAO,EAAE,CAAC;IACb,OAAO,CAAC,KAAK,CACX,mEAAmE,CACpE,CAAC;IACF,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC;AAED,8EAA8E;AAC9E,sBAAsB;AACtB,8EAA8E;AAE9E,MAAM,mBAAmB,GAAG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;sPAmD0N,CAAC;AAEvP,8EAA8E;AAC9E,aAAa;AACb,8EAA8E;AAE9E,8DAA8D;AAC9D,MAAM,MAAM,GAAG,IAAI,SAAS,CAAC,EAAE,IAAI,EAAE,kBAAkB,EAAE,OAAO,EAAE,OAAO,EAAE,YAAY,EAAE,mBAAmB,EAAS,CAAC,CAAC;AAEvH,8EAA8E;AAC9E,6DAA6D;AAC7D,8EAA8E;AAE9E,mBAAmB,CACjB,MAAM,EACN,oBAAoB,EACpB,oBAAoB,EACpB,EAAE,QAAQ,EAAE,kBAAkB,EAAE,EAChC,KAAK,IAAI,EAAE;IACT,MAAM,IAAI,GAAG,MAAM,YAAY,CAAC,kBAAkB,CAAC,CAAC;IACpD,OAAO;QACL,QAAQ,EAAE;YACR;gBACE,GAAG,EAAE,oBAAoB;gBACzB,QAAQ,EAAE,kBAAkB;gBAC5B,IAAI,EAAE,IAAI,IAAI,yFAAyF;aACxG;SACF;KACF,CAAC;AACJ,CAAC,CACF,CAAC;AAEF,mBAAmB,CACjB,MAAM,EACN,iBAAiB,EACjB,iBAAiB,EACjB,EAAE,QAAQ,EAAE,kBAAkB,EAAE,EAChC,KAAK,IAAI,EAAE;IACT,MAAM,IAAI,GAAG,MAAM,YAAY,CAAC,eAAe,CAAC,CAAC;IACjD,OAAO;QACL,QAAQ,EAAE,CAAC;gBACT,GAAG,EAAE,iBAAiB;gBACtB,QAAQ,EAAE,kBAAkB;gBAC5B,IAAI,EAAE,IAAI,IAAI,oEAAoE;aACnF,CAAC;KACH,CAAC;AACJ,CAAC,CACF,CAAC;AAEF,mBAAmB,CACjB,MAAM,EACN,oBAAoB,EACpB,oBAAoB,EACpB,EAAE,QAAQ,EAAE,kBAAkB,EAAE,EAChC,KAAK,IAAI,EAAE;IACT,MAAM,IAAI,GAAG,MAAM,YAAY,CAAC,kBAAkB,CAAC,CAAC;IACpD,OAAO;QACL,QAAQ,EAAE,CAAC;gBACT,GAAG,EAAE,oBAAoB;gBACzB,QAAQ,EAAE,kBAAkB;gBAC5B,IAAI,EAAE,IAAI,IAAI,gEAAgE;aAC/E,CAAC;KACH,CAAC;AACJ,CAAC,CACF,CAAC;AAEF,8EAA8E;AAC9E,iBAAiB;AACjB,8EAA8E;AAE9E,sBAAsB,CAAC,MAAM,CAAC,CAAC;AAC/B,yBAAyB,CAAC,MAAM,CAAC,CAAC;AAClC,2BAA2B,CAAC,MAAM,CAAC,CAAC;AACpC,uBAAuB,CAAC,MAAM,CAAC,CAAC;AAChC,oBAAoB,CAAC,MAAM,CAAC,CAAC;AAC7B,gBAAgB,CAAC,MAAM,EAAE,qBAAqB,CAAC,CAAC;AAChD,mBAAmB,CAAC,MAAM,CAAC,CAAC;AAC5B,mBAAmB,CAAC,MAAM,CAAC,CAAC;AAC5B,qBAAqB,CAAC,MAAM,CAAC,CAAC;AAC9B,4BAA4B,CAAC,MAAM,CAAC,CAAC;AACrC,oBAAoB,CAAC,MAAM,CAAC,CAAC;AAE7B,8EAA8E;AAC9E,UAAU;AACV,8EAA8E;AAE9E,MAAM,CAAC,MAAM,CACX,MAAM,EACN,wLAAwL,EACxL,EAAE,EACF,GAAG,EAAE,CAAC,CAAC;IACL,QAAQ,EAAE;QACR;YACE,IAAI,EAAE,MAAe;YACrB,OAAO,EAAE;gBACP,IAAI,EAAE,MAAe;gBACrB,IAAI,EAAE;oBACJ,sCAAsC;oBACtC,EAAE;oBACF,iMAAiM;oBACjM,EAAE;oBACF,4KAA4K;oBAC5K,EAAE;oBACF,oBAAoB;oBACpB,6PAA6P;oBAC7P,+EAA+E;oBAC/E,0GAA0G;oBAC1G,yJAAyJ;oBACzJ,+YAA+Y;oBAC/Y,2KAA2K;oBAC3K,uUAAuU;oBACvU,iHAAiH;oBACjH,+LAA+L;oBAC/L,EAAE;oBACF,8GAA8G;oBAC9G,EAAE;oBACF,iBAAiB;oBACjB,8IAA8I;oBAC9I,4GAA4G;oBAC5G,mHAAmH;oBACnH,EAAE;oBACF,sLAAsL;oBACtL,EAAE;oBACF,sQAAsQ;oBACtQ,EAAE;oBACF,uMAAuM;oBACvM,EAAE;oBACF,WAAW;oBACX,6FAA6F;oBAC7F,6EAA6E;oBAC7E,0GAA0G;oBAC1G,wFAAwF;oBACxF,mEAAmE;oBACnE,EAAE;oBACF,0DAA0D;iBAC3D,CAAC,IAAI,CAAC,IAAI,CAAC;aACb;SACF;KACF;CACF,CAAC,CACH,CAAC;AAEF,MAAM,CAAC,MAAM,CACX,kBAAkB,EAClB,yKAAyK;IACvK,gIAAgI,EAClI,EAAE,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,oCAAoC,CAAC,EAAE,EACzE,KAAK,EAAE,EAAE,UAAU,EAAE,EAAE,EAAE;IACvB,IAAI,UAAU,GAAG,mDAAmD,UAAU,oEAAoE,UAAU,wIAAwI,UAAU,kFAAkF,UAAU,+EAA+E,UAAU,gFAAgF,CAAC;IACpjB,IAAI,CAAC;QACH,MAAM,IAAI,GAAG,MAAM,OAAO,CAAC,KAAK,EAAE,wCAAwC,UAAU,EAAE,CAAC,CAAC;QACxF,IAAK,IAAY,CAAC,MAAM,EAAE,CAAC;YACzB,UAAU,GAAI,IAAY,CAAC,MAAM,CAAC;QACpC,CAAC;IACH,CAAC;IAAC,OAAO,CAAC,EAAE,CAAC;QACX,WAAW;IACb,CAAC;IACD,OAAO;QACL,QAAQ,EAAE;YACR;gBACE,IAAI,EAAE,MAAe;gBACrB,OAAO,EAAE;oBACP,IAAI,EAAE,MAAe;oBACrB,IAAI,EAAE,UAAU;iBACjB;aACF;SACF;KACF,CAAC;AACJ,CAAC,CACF,CAAC;AAEF,8EAA8E;AAC9E,oBAAoB;AACpB,8EAA8E;AAE9E,MAAM,SAAS,GAAG,IAAI,oBAAoB,EAAE,CAAC;AAE7C,KAAK,UAAU,IAAI;IACjB,IAAI,CAAC;QACH,MAAM,IAAI,GAAG,MAAM,cAAc,CAAC,OAAO,EAAE,UAAU,EAAE,YAAY,CAAC,CAAC;QACrE,UAAU,CAAC,IAAI,CAAC,CAAC;IACnB,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,yEAAyE;QACzE,IAAI,OAAO,CAAC,GAAG,CAAC,gBAAgB,EAAE,CAAC;YACjC,OAAO,CAAC,KAAK,CAAC,qCAAqC,EAAE,GAAG,CAAC,CAAC;QAC5D,CAAC;IACH,CAAC;IAED,MAAM,QAAQ,GAAI,MAA2F,CAAC,MAAM,CAAC;IACrH,QAAQ,CAAC,aAAa,GAAG,GAAG,EAAE;QAC5B,MAAM,IAAI,GAAG,QAAQ,CAAC,qBAAqB,EAAE,CAAC;QAC9C,MAAM,KAAK,GAAG,eAAe,CAAC,IAAmE,CAAC,CAAC;QACnG,wBAAwB,CAAC,CAAC,CAAC,KAAK,EAAE,SAAS,EAAE,QAAQ,CAAC,kBAAkB,CAAC,CAAC,CAAC;IAC7E,CAAC,CAAC;IAEF,MAAM,MAAM,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC;AAClC,CAAC;AAED,IAAI,EAAE,CAAC,KAAK,CAAC,OAAO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package/dist/shared.js

@@ -331,13 +331,13 @@ export function getCaptionForImage(filename) {
     if (base.startsWith("coverage_overview"))
         return "FLooP coverage overview — single-panel Voronoi colored by SIOM occupation measure.";
     if (base.startsWith("structure"))
-        return "FLooP structure overview — topology-aware surface without the extra node/edge overlay clutter.";
+        return "FLooP structure overview — default free (CHL) topology; surface without the extra node/edge overlay clutter.";
     if (base.startsWith("umatrix"))
         return "U-matrix — weight distance between neighbors. Dark = similar (cluster interior), bright = dissimilar (boundary).";
     if (base.startsWith("hit_histogram"))
         return "Hit histogram — sample count per node. Hot = dense clusters; empty = sparse or oversized grid.";
     if (base.startsWith("hits"))
-        return "FLooP hit distribution — Voronoi cells colored by how often chain nodes win.";
+        return "FLooP hit distribution — Voronoi cells colored by how often nodes win the BMU (free or chain topology).";
     if (base.startsWith("clusters"))
         return "Cluster analysis — boundary detection. Colors = cluster assignments.";
     if (base.startsWith("transition_flow"))

package/dist/shared.js.map

@@ -1 +1 @@
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package/dist/tools/account.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"account.d.ts","sourceRoot":"","sources":["../../src/tools/account.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAGzE,wBAAgB,mBAAmB,CAAC,MAAM,EAAE,SAAS,GAAG,IAAI,CAgK3D"}
+{"version":3,"file":"account.d.ts","sourceRoot":"","sources":["../../src/tools/account.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAGzE,wBAAgB,mBAAmB,CAAC,MAAM,EAAE,SAAS,GAAG,IAAI,CAyK3D"}

package/dist/tools/account.js

@@ -35,8 +35,17 @@ NOT FOR: Training itself — use jobs(action=train_map). This tool only manages
             const fmtLimit = (v) => v === -1 || v === "-1" ? "unlimited" : String(v ?? "?");
             const historyData = await apiCall("GET", "/v1/compute/history?limit=5").catch(() => null);
             const leaseData = await apiCall("GET", "/v1/compute/lease").catch(() => null);
+            const algoNames = {
+                train_som: "SOM",
+                train_siom: "SIOM",
+                train_floop_siom: "FLooP-SIOM",
+            };
+            const algos = Array.isArray(plan.allowed_algorithms) && plan.allowed_algorithms.length > 0
+                ? plan.allowed_algorithms.map((a) => algoNames[a] ?? a).join(", ")
+                : "All";
             const lines = [
                 `Plan: ${String(plan.tier ?? "unknown").charAt(0).toUpperCase()}${String(plan.tier ?? "unknown").slice(1)} | Compute: ${computeDesc}`,
+                `  Algorithms: ${algos}`,
                 `  Concurrency: ${plan.max_concurrent_jobs ?? "?"} jobs | Datasets: ${fmtLimit(plan.max_datasets)} (${fmtLimit(plan.max_dataset_rows)} rows each)`,
                 `  Monthly Jobs: ${fmtLimit(plan.max_monthly_jobs)} | Grid Size: ${fmtLimit(plan.max_grid_size)} | Features: ${fmtLimit(plan.max_features)}`,
             ];

package/dist/tools/account.js.map

@@ -1 +1 @@
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+{"version":3,"file":"account.js","sourceRoot":"","sources":["../../src/tools/account.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,OAAO,EAAE,MAAM,cAAc,CAAC;AAEvC,MAAM,UAAU,mBAAmB,CAAC,MAAiB;IACnD,MAAM,CAAC,IAAI,CACT,SAAS,EACT;;;;;;;;;;;;;;6GAcyG,EACzG;QACE,MAAM,EAAE,CAAC;aACN,IAAI,CAAC,CAAC,QAAQ,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,iBAAiB,EAAE,SAAS,EAAE,WAAW,CAAC,CAAC;aAChG,QAAQ,CAAC,4LAA4L,CAAC;QACzM,IAAI,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,6LAA6L,CAAC;QACnO,gBAAgB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,iEAAiE,CAAC;QACnH,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,2DAA2D,CAAC;KACnG,EACD,KAAK,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,gBAAgB,EAAE,KAAK,EAAE,EAAE,EAAE;QAClD,IAAI,MAAM,KAAK,QAAQ,EAAE,CAAC;YACxB,MAAM,IAAI,GAAG,CAAC,MAAM,OAAO,CAAC,KAAK,EAAE,iBAAiB,CAAC,CAA4B,CAAC;YAClF,MAAM,IAAI,GAAI,IAAI,CAAC,IAAgC,IAAI,EAAE,CAAC;YAC1D,MAAM,OAAO,GAAI,IAAI,CAAC,OAAmC,IAAI,EAAE,CAAC;YAChE,MAAM,MAAM,GAAI,IAAI,CAAC,MAAkC,IAAI,EAAE,CAAC;YAC9D,MAAM,SAAS,GAAI,IAAI,CAAC,+BAA2D,IAAI,EAAE,CAAC;YAC1F,MAAM,IAAI,GAAI,IAAI,CAAC,eAA2C,IAAI,EAAE,CAAC;YACrE,MAAM,UAAU,GAAG,IAAI,CAAC,WAAW,IAAI,IAAI,CAAC,aAAa,IAAI,KAAK,CAAC;YACnE,MAAM,WAAW,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC,CAAC,QAAQ,OAAO,CAAC,SAAS,GAAG,OAAO,CAAC,WAAW,CAAC,CAAC,CAAC,KAAK,OAAO,CAAC,WAAW,IAAI,CAAC,CAAC,CAAC,EAAE,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC;YACnK,MAAM,QAAQ,GAAG,CAAC,CAAU,EAAE,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,KAAK,IAAI,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,IAAI,GAAG,CAAC,CAAC;YACzF,MAAM,WAAW,GAAQ,MAAM,OAAO,CAAC,KAAK,EAAE,6BAA6B,CAAC,CAAC,KAAK,CAAC,GAAG,EAAE,CAAC,IAAI,CAAC,CAAC;YAC/F,MAAM,SAAS,GAAG,MAAM,OAAO,CAAC,KAAK,EAAE,mBAAmB,CAAC,CAAC,KAAK,CAAC,GAAG,EAAE,CAAC,IAAI,CAAC,CAAC;YAC9E,MAAM,SAAS,GAA2B;gBACxC,SAAS,EAAE,KAAK;gBAChB,UAAU,EAAE,MAAM;gBAClB,gBAAgB,EAAE,YAAY;aAC/B,CAAC;YACF,MAAM,KAAK,GAAG,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,kBAAkB,CAAC,IAAI,IAAI,CAAC,kBAAkB,CAAC,MAAM,GAAG,CAAC;gBACxF,CAAC,CAAC,IAAI,CAAC,kBAAkB,CAAC,GAAG,CAAC,CAAC,CAAS,EAAE,EAAE,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC;gBAC1E,CAAC,CAAC,KAAK,CAAC;YACV,MAAM,KAAK,GAAa;gBACtB,SAAS,MAAM,CAAC,IAAI,CAAC,IAAI,IAAI,SAAS,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,WAAW,EAAE,GAAG,MAAM,CAAC,IAAI,CAAC,IAAI,IAAI,SAAS,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,eAAe,WAAW,EAAE;gBACrI,iBAAiB,KAAK,EAAE;gBACxB,kBAAkB,IAAI,CAAC,mBAAmB,IAAI,GAAG,qBAAqB,QAAQ,CAAC,IAAI,CAAC,YAAY,CAAC,KAAK,QAAQ,CAAC,IAAI,CAAC,gBAAgB,CAAC,aAAa;gBAClJ,mBAAmB,QAAQ,CAAC,IAAI,CAAC,gBAAgB,CAAC,iBAAiB,QAAQ,CAAC,IAAI,CAAC,aAAa,CAAC,gBAAgB,QAAQ,CAAC,IAAI,CAAC,YAAY,CAAC,EAAE;aAC7I,CAAC;YACF,IAAI,WAAW,EAAE,CAAC;gBAChB,MAAM,WAAW,GAAG,WAAW,CAAC,YAAY,IAAI,SAAS,CAAC;gBAC1D,IAAI,WAAW,KAAK,UAAU,EAAE,CAAC;oBAC/B,KAAK,CAAC,IAAI,CAAC,sCAAsC,CAAC,CAAC;gBACrD,CAAC;qBAAM,IAAI,WAAW,KAAK,SAAS,EAAE,CAAC;oBACrC,KAAK,CAAC,IAAI,CAAC,eAAe,CAAC,WAAW,CAAC,oBAAoB,GAAG,GAAG,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC;gBAC7F,CAAC;qBAAM,CAAC;oBACN,qEAAqE;oBACrE,MAAM,KAAK,GAAG,WAAW,CAAC,oBAAoB,IAAI,CAAC,CAAC;oBACpD,IAAI,KAAK,KAAK,CAAC,EAAE,CAAC;wBAChB,KAAK,CAAC,IAAI,CAAC,wDAAwD,CAAC,CAAC;oBACvE,CAAC;yBAAM,CAAC;wBACN,KAAK,CAAC,IAAI,CAAC,eAAe,CAAC,KAAK,GAAG,GAAG,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC;oBAClE,CAAC;gBACH,CAAC;YACH,CAAC;YACD,IAAI,OAAO,CAAC,SAAS;gBAAE,KAAK,CAAC,IAAI,CAAC,qBAAqB,OAAO,CAAC,SAAS,KAAK,CAAC,CAAC;YAC/E,IAAI,SAAS,IAAK,SAAiB,CAAC,QAAQ,EAAE,CAAC;gBAC7C,KAAK,CAAC,IAAI,CAAC,EAAE,EAAE,uBAAwB,SAAiB,CAAC,IAAI,MAAM,IAAI,CAAC,KAAK,CAAE,SAAiB,CAAC,iBAAiB,GAAG,KAAK,CAAC,WAAW,CAAC,CAAC;YAC1I,CAAC;YACD,MAAM,OAAO,GAAG,MAAM,CAAC,MAAM,CAAC,YAAY,IAAI,IAAI,CAAC,YAAY,IAAI,CAAC,CAAC,CAAC;YACtE,MAAM,OAAO,GAAG,MAAM,CAAC,MAAM,CAAC,YAAY,IAAI,IAAI,CAAC,YAAY,IAAI,CAAC,CAAC,CAAC;YACtE,MAAM,WAAW,GAAG,MAAM,CAAE,SAAiB,EAAE,KAAK,IAAI,CAAC,CAAC,CAAC;YAC3D,KAAK,CAAC,IAAI,CAAC,EAAE,EAAE,eAAe,OAAO,cAAc,OAAO,eAAe,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,GAAG,CAAC,CAAC,GAAG,WAAW,CAAC,GAAG,EAAE,CAAC,WAAW,CAAC,CAAC;YACpI,IAAI,IAAI,CAAC,WAAW,KAAK,SAAS;gBAAE,KAAK,CAAC,IAAI,CAAC,YAAY,IAAI,CAAC,WAAW,IAAI,IAAI,CAAC,kBAAkB,UAAU,CAAC,CAAC;YAClH,IAAI,MAAM,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;gBACtC,KAAK,CAAC,IAAI,CAAC,EAAE,EAAE,0BAA0B,CAAC,CAAC;gBAC3C,KAAK,MAAM,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,MAAM,CAAC,OAAO,CAAC,SAAS,CAAC,EAAE,CAAC;oBAC/C,IAAI,CAAC,KAAK,SAAS;wBAAE,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gBACpD,CAAC;YACH,CAAC;YACD,OAAO,EAAE,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAe,EAAE,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;QAC1E,CAAC;QACD,IAAI,MAAM,KAAK,iBAAiB,EAAE,CAAC;YACjC,IAAI,CAAC,IAAI,EAAE,CAAC;gBACV,IAAI,CAAC;oBACH,MAAM,SAAS,GAAG,MAAM,OAAO,CAAC,KAAK,EAAE,mBAAmB,CAAgD,CAAC;oBAC3G,MAAM,KAAK,GAAG,CAAC,0BAA0B,CAAC,CAAC;oBAC3C,KAAK,MAAM,CAAC,GAAG,EAAE,KAAK,CAAC,IAAI,MAAM,CAAC,OAAO,CAAC,SAAS,CAAC,KAAK,CAAC,EAAE,CAAC;wBAC3D,KAAK,CAAC,IAAI,CAAC,KAAK,GAAG,KAAK,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC;oBACxC,CAAC;oBACD,OAAO,EAAE,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;gBACjE,CAAC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package/dist/tools/explore_map.js

@@ -52,7 +52,7 @@ function buildMetrics(summary) {
     const samples = String(summary.n_samples ?? "N/A");
     const features = String(summary.n_features ?? "N/A");
     if (jobType === "train_floop_siom") {
-        const topology = String(summary.topology ?? "chain");
+        const topology = String(summary.topology ?? "free");
         const coverage = summary.coverage;
         const utilization = coverage?.utilization != null ? `${(Number(coverage.utilization) * 100).toFixed(1)}%` : "N/A";
         const deadFraction = coverage?.dead_fraction != null ? `${(Number(coverage.dead_fraction) * 100).toFixed(1)}%` : "N/A";

package/dist/tools/explore_map.js.map

@@ -1 +1 @@
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package/dist/tools/guide_barsom.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"guide_barsom.d.ts","sourceRoot":"","sources":["../../src/tools/guide_barsom.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAEzE,wBAAgB,uBAAuB,CAAC,MAAM,EAAE,SAAS,GAAG,IAAI,CAkD/D"}
+{"version":3,"file":"guide_barsom.d.ts","sourceRoot":"","sources":["../../src/tools/guide_barsom.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAmEzE,wBAAgB,uBAAuB,CAAC,MAAM,EAAE,SAAS,GAAG,IAAI,CAgB/D"}

package/dist/tools/guide_barsom.js

@@ -1,15 +1,34 @@
-export function registerGuideBarsomTool(server) {
-    server.tool("guide_barsom_workflow", `Retrieve the Standard Operating Procedure (SOP) for the mapping analysis pipeline.
-ALWAYS call this tool first if you are unsure of the steps to execute a complete mapping analysis.
-The workflow explains the exact sequence of tool calls needed: Upload → Preprocess → Train → Wait → Analyze.
-For parameter hints (grid, epochs, model, etc.), call the training_guidance tool or use the prepare_training prompt before train_map.`, {}, async () => {
-        return {
-            content: [
-                {
-                    type: "text",
-                    text: `Mapping Analysis Standard Operating Procedure (SOP)
+const BOOTSTRAP = `## Proxy and capabilities
+
+**What this MCP is:** A local stdio server that forwards tool calls to the Barivia REST API. Configure \`BARIVIA_API_KEY\` and \`BARIVIA_API_URL\` in the client; there is no direct DB or object storage access from the MCP process.
+
+**Tool map (high level):**
+- \`datasets\` — upload, preview, list, subset, delete, add_expression
+- \`jobs\` — \`train_map\`, \`train_siom_map\`, \`train_floop_siom\` (and deprecated alias \`train_floop_chain\`), plus \`status\`, \`list\`, \`compare\`, \`cancel\`, \`delete\`, \`batch_predict\`, \`run_baseline_study\`
+- \`results\` — get, recolor, download, export, transition_flow
+- \`inference\` — predict, enrich, compare, report, project_columns
+- \`account\` — status, compute credits, history
+- \`training_guidance\` — API-served parameter hints (grid, epochs, presets, SIOM/FLooP knobs)
+- \`training_prep\`, \`results_explorer\`, \`training_monitor\` — **optional** rich UIs (see below)
+- \`send_feedback\`, \`guide_barsom_workflow\` (this tool)
+
+**Async contract:** Training submits return \`job_id\` immediately. Poll \`jobs(action=status, job_id=...)\` every **10–15s**. “Still running” is not failure; allow several minutes for larger grids or FLooP-SIOM (\`max_nodes\` is a node budget, not a grid side).
+
+**Training modes (when to use which):**
+- **Standard SOM** — \`jobs(action=train_map)\`: fixed hex/grid map.
+- **SIOM** — \`jobs(action=train_siom_map)\`: same grid flow with coverage regularization.
+- **FLooP-SIOM** — \`jobs(action=train_floop_siom)\`: growing manifold; default \`topology=free\` (CHL); optional \`topology=chain\`.
 
-Step 1: Upload Data
+**MCP Apps (optional rich UI):** **Not required** for any outcome—the same work completes with \`jobs\`, \`results\`, and thread text alone. **Recommended** for clarity: **preparation** → \`training_prep\`; **postprocessing / exploration** → \`results_explorer\` after completion. **Monitoring** → \`training_monitor(job_id)\` is optional polish (charts); \`jobs(action=status)\` is sufficient. If the host has no MCP Apps, ignore these or use standalone URLs from tool responses when offered.
+
+**Where to go next:** Parameter presets and field-level hints → \`training_guidance\` or the \`prepare_training\` prompt. Full step order → **Workflow (SOP)** below.
+
+---
+
+## Workflow (SOP)
+
+`;
+const SOP = `Step 1: Upload Data
 - Use \`datasets(action=upload)\` with \`file_path\` to your CSV (server reads from workspace root; token-efficient). Use \`csv_data\` only for small inline pastes.
 - BEFORE UPLOADING: Clean the dataset to remove NaNs or malformed data.
 - Capture the \`dataset_id\` returned.
@@ -19,28 +38,38 @@ Step 2: Preview & Preprocess
 - Check for skewed columns requiring 'log' or 'sqrt' transforms.
 - Check for cyclical or temporal features (hours, days) requiring \`cyclic_features\` or \`temporal_features\` during training.
 - Raw categorical/text columns usually stay out of the first map. If one really matters, use explicit baseline \`categorical_features\` encoding rather than assuming advanced categorical embeddings.
+- *(Optional UI)* \`training_prep(dataset_id=...)\` helps review variables, transforms, and hyperparameters before submit—not required if you train directly with \`jobs\`.
 
 Step 3: Train the map
-- Call \`jobs(action=train_map, dataset_id=...)\` with the \`dataset_id\`.
-- Carefully select columns to include (start with 5-10).
+- Choose one: \`jobs(action=train_map, dataset_id=...)\`, \`jobs(action=train_siom_map, dataset_id=...)\`, or \`jobs(action=train_floop_siom, dataset_id=...)\`.
+- Carefully select columns to include (start with 5–10).
 - Assign \`feature_weights\` when some numeric or encoded features should matter more than others.
 - Wait for the returned \`job_id\`.
 - For projection and inference, use the same job_id from train_som (or the new job_id returned by recolor/project when applicable).
+- *(Optional UI)* After submit, \`training_monitor(job_id=...)\` can show progress visually; **\`jobs(action=status)\` alone is enough** to know when training finished.
 
 Step 4: Wait for Completion (ASYNC POLLING)
-- Use \`jobs(action=status, job_id=...)\` every 10-15 seconds.
+- Use \`jobs(action=status, job_id=...)\` every 10–15 seconds.
 - Wait until status is "completed". DO NOT assume failure before 3 minutes (or longer for large grids).
 - If it fails, read the error message and adjust parameters (e.g., reduce grid size, fix column names).
 
 Step 5: Analyze and Export
 - Once completed, use \`results(action=get, job_id=...)\` to get the map, metrics (QE, TE, Silhouette, etc.), and figures (U-matrix, component planes, clusters, hit histogram). There is no separate \`analyze\` tool — all visualizations and metrics come from \`results(action=get)\`.
+- *(Optional UI)* \`results_explorer(job_id=...)\` is especially useful to browse figures and metrics interactively; **\`results(action=get)\` is sufficient** without it.
 Step 5b (optional): Use \`jobs(action=compare, job_ids=[id1, id2, ...])\` to compare multiple train_map runs (QE, TE, explained variance, silhouette) before committing to one.
 
 What you can do at each step:
 - After upload: datasets(preview), datasets(subset), datasets(add_expression), datasets(delete).
-- After training completes: results(get/download/export), results(recolor), results(transition_flow), jobs(compare), inference(predict/enrich/compare/project_columns/report).`
-                }
-            ]
+- After training completes: results(get/download/export), results(recolor), results(transition_flow), jobs(compare), inference(predict/enrich/compare/project_columns/report).`;
+export function registerGuideBarsomTool(server) {
+    server.tool("guide_barsom_workflow", `Ground-truth orientation for this MCP: (A) how the proxy works, tool categories, async training rules, training modes, and optional MCP App UIs; (B) the step-by-step mapping SOP. Call at the **start of mapping work** or when the user asks what the integration can do. For field-level training parameters only, use training_guidance or prepare_training.`, {}, async () => {
+        return {
+            content: [
+                {
+                    type: "text",
+                    text: BOOTSTRAP + SOP,
+                },
+            ],
         };
     });
 }

package/dist/tools/guide_barsom.js.map

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package/dist/tools/jobs.d.ts

@@ -1,5 +1,5 @@
 import type { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
-export declare const JOBS_DESCRIPTION_BASE = "Manage and inspect jobs.\n\n| Action | Use when |\n|--------|----------|\n| status | Polling after any async job submission \u2014 call every 10\u201315s |\n| list | Finding job IDs, checking what is pending/completed, reviewing hyperparameters. Response includes job_type (train_map, enrich, report, recolor, project, transition_flow, compare, predict) to filter or display. |\n| compare | Picking the best training run from a set of completed jobs |\n| train_map | Submitting a new map training job \u2014 returns job_id for polling |\n| train_siom_map | Submitting a self-interacting map training job \u2014 same map flow with SIOM coverage control |\n| train_floop_chain | Submitting a FLooP-SIOM principal-curve training job |\n| cancel | Stopping a running or pending job to free the worker |\n| delete | Permanently removing a job and all its S3 result files |\n\nFor parameter hints (grid, epochs, batch, model, periodic, FLooP max_nodes/effort), call the **training_guidance** tool or use the **prepare_training** prompt before training.\n\nASYNC POLLING PROTOCOL (action=status):\n- Poll every 10-15 seconds. Do NOT poll faster \u2014 it wastes context.\n- Progress increases through phases (ordering then convergence for map training). Other job types may use different phase logic.\n- For large grids (40\u00D740+), do not assume failure before 3 minutes on CPU.\n- Wait for status \"completed\" before calling results(action=get).\n- Map training typical times: 10\u00D710 ~30s | 20\u00D720 ~3\u20135 min | 40\u00D740 ~15\u201330 min.\n\nESCALATION (action=status):\n- completed \u2192 call results(action=get) to retrieve the map and metrics\n- failed \u2192 error message and optional failure_stage (e.g. preprocessing, training, metrics, visualization, upload) indicate which phase broke:\n  - memory/allocation error: reduce batch_size or grid size and retrain\n  - column missing: verify with datasets(action=preview)\n  - NaN error: user must clean the dataset\n\naction=train_map / train_siom_map: Submits a grid-map training job. Returns job_id \u2014 poll with jobs(action=status, job_id=...).\n  Presets: quick | standard | refined | high_res \u2014 use preset=... for grid/epochs/batch defaults; call training_guidance for details.\n  Presets refined/high_res may use GPU. On CPU-only hosts pass backend=cpu. API expects strings \"cpu\" | \"gpu\" | \"gpu_graphs\" (no colon). Future backends (e.g. non-CUDA) may be added under the same contract.\n  normalize: \"auto\" (default) = scale only non-cyclic features; \"all\" = scale every feature. Use \"auto\" when using cyclic_features.\n  categorical_features: optional baseline categorical support using explicit weighted one-hot encoding. Provide the raw column name, allowed categories, and a weight. Advanced categorical embeddings are intentionally outside this default tool surface.\naction=train_floop_chain: Submits a FLooP-SIOM job. Use when you want a growing chain/free-topology manifold instead of a fixed hex grid. Key params: topology=free|chain, max_nodes, effort, gamma, siom_decay.\n  max_nodes is a total node budget, not a grid width or area. If omitted, the backend uses a dataset-size heuristic (roughly 2*sqrt(n_samples), capped for stability).\n  effort controls passes only: quick\u224815, standard\u224830, thorough\u224860. If coverage collapses, reduce max_nodes before increasing effort.\naction=compare: Returns a metrics table (QE, TE, explained variance, silhouette) for 2+ jobs.\naction=cancel: Not instant \u2014 worker checks between phases. Expect up to 30s delay.\naction=delete: WARNING \u2014 job ID will no longer work with results or any other tool.";
+export declare const JOBS_DESCRIPTION_BASE = "Manage and inspect jobs.\n\n| Action | Use when |\n|--------|----------|\n| status | Polling after any async job submission \u2014 call every 10\u201315s |\n| list | Finding job IDs, checking what is pending/completed, reviewing hyperparameters. Response includes job_type (train_map, enrich, report, recolor, project, transition_flow, compare, predict) to filter or display. |\n| compare | Picking the best training run from a set of completed jobs |\n| train_map | Submitting a new map training job \u2014 returns job_id for polling |\n| train_siom_map | Submitting a self-interacting map training job \u2014 same map flow with SIOM coverage control |\n| train_floop_siom | Submitting a FLooP-SIOM job (growing manifold; default topology=free / CHL) |\n| train_floop_chain | Deprecated alias for train_floop_siom \u2014 same behavior; prefer train_floop_siom |\n| cancel | Stopping a running or pending job to free the worker |\n| delete | Permanently removing a job and all its S3 result files |\n\nFor parameter hints (grid, epochs, batch, model, periodic, FLooP max_nodes/effort), call the **training_guidance** tool or use the **prepare_training** prompt before training.\n\nASYNC POLLING PROTOCOL (action=status):\n- Poll every 10-15 seconds. Do NOT poll faster \u2014 it wastes context.\n- Progress increases through phases (ordering then convergence for map training). Other job types may use different phase logic.\n- For large grids (40\u00D740+), do not assume failure before 3 minutes on CPU.\n- Wait for status \"completed\" before calling results(action=get).\n- Map training typical times: 10\u00D710 ~30s | 20\u00D720 ~3\u20135 min | 40\u00D740 ~15\u201330 min.\n\nESCALATION (action=status):\n- completed \u2192 call results(action=get) to retrieve the map and metrics\n- failed \u2192 error message and optional failure_stage (e.g. preprocessing, training, metrics, visualization, upload) indicate which phase broke:\n  - memory/allocation error: reduce batch_size or grid size and retrain\n  - column missing: verify with datasets(action=preview)\n  - NaN error: user must clean the dataset\n\naction=train_map / train_siom_map: Submits a grid-map training job. Returns job_id \u2014 poll with jobs(action=status, job_id=...).\n  Presets: quick | standard | refined | high_res \u2014 use preset=... for grid/epochs/batch defaults; call training_guidance for details.\n  Presets refined/high_res may use GPU. On CPU-only hosts pass backend=cpu. API expects strings \"cpu\" | \"gpu\" | \"gpu_graphs\" (no colon). Future backends (e.g. non-CUDA) may be added under the same contract.\n  normalize: \"auto\" (default) = scale only non-cyclic features; \"all\" = scale every feature. Use \"auto\" when using cyclic_features.\n  categorical_features: optional baseline categorical support using explicit weighted one-hot encoding. Provide the raw column name, allowed categories, and a weight. Advanced categorical embeddings are intentionally outside this default tool surface.\n  train_siom_map only: siom_feature_geometry l2 (default) | mixed | auto \u2014 torus distance on cyclic (cos,sin) pairs when mixed or auto with cyclic encodings. siom_qe_backend cpu|cuda|auto and siom_qe_batch_size align siom_qe with training geometry when mixed.\naction=train_floop_siom (preferred) or train_floop_chain (deprecated alias): Submits FLooP-SIOM \u2014 a growing node-budget manifold instead of a fixed hex grid. Default topology is free (CHL dynamic graph); topology=chain is optional for a strict 1D linked-list backbone.\n  Key params: topology (default free), max_nodes, effort, gamma, siom_decay.\n  max_nodes is a total node budget, not a grid width or area. If omitted, the backend uses a dataset-size heuristic (roughly 2*sqrt(n_samples), capped for stability).\n  effort controls passes only: quick\u224815, standard\u224830, thorough\u224860. If coverage collapses, reduce max_nodes before increasing effort.\naction=compare: Returns a metrics table (QE, TE, explained variance, silhouette) for 2+ jobs.\naction=cancel: Not instant \u2014 worker checks between phases. Expect up to 30s delay.\naction=delete: WARNING \u2014 job ID will no longer work with results or any other tool.";
 export type TrainingPreset = {
     grid: number[];
     epochs: number[];
@@ -50,6 +50,10 @@ export type TrainMapLikeArgs = {
     output_dpi?: "standard" | "retina" | "print";
     colormap?: string;
     row_range?: [number, number];
+    /** train_siom_map / SIOM jobs only */
+    siom_feature_geometry?: "l2" | "mixed" | "auto";
+    siom_qe_backend?: "cpu" | "cuda" | "auto";
+    siom_qe_batch_size?: number;
 };
 export declare function fetchTrainingPresets(): Promise<Record<string, TrainingPreset>>;
 export declare function buildTrainMapParams(args: TrainMapLikeArgs, presets: Record<string, TrainingPreset>): {

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