@aws-sdk/client-omics 3.935.0 → 3.939.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist-cjs/index.js +314 -0
- package/dist-es/models/enums.js +270 -0
- package/dist-es/models/models_0.js +1 -270
- package/dist-types/commands/StartVariantImportJobCommand.d.ts +1 -1
- package/dist-types/commands/UpdateVariantStoreCommand.d.ts +1 -1
- package/dist-types/commands/UpdateWorkflowCommand.d.ts +1 -1
- package/dist-types/commands/UpdateWorkflowVersionCommand.d.ts +1 -1
- package/dist-types/index.d.ts +0 -1
- package/dist-types/models/enums.d.ts +754 -0
- package/dist-types/models/models_0.d.ts +166 -755
- package/dist-types/ts3.4/commands/StartVariantImportJobCommand.d.ts +1 -1
- package/dist-types/ts3.4/commands/UpdateVariantStoreCommand.d.ts +1 -1
- package/dist-types/ts3.4/commands/UpdateWorkflowCommand.d.ts +1 -1
- package/dist-types/ts3.4/commands/UpdateWorkflowVersionCommand.d.ts +1 -1
- package/dist-types/ts3.4/index.d.ts +0 -1
- package/dist-types/ts3.4/models/enums.d.ts +338 -0
- package/dist-types/ts3.4/models/models_0.d.ts +86 -339
- package/package.json +12 -12
- package/dist-es/models/models_1.js +0 -1
- package/dist-types/models/models_1.d.ts +0 -166
- package/dist-types/ts3.4/models/models_1.d.ts +0 -45
package/dist-cjs/index.js
CHANGED
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@@ -6740,10 +6740,280 @@ const waitUntilWorkflowVersionActive = async (params, input) => {
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6740
6740
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return utilWaiter.checkExceptions(result);
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6741
6741
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};
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6742
6742
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6743
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+
const Accelerators = {
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6744
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GPU: "GPU",
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6745
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};
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6746
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const ShareStatus = {
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6747
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ACTIVATING: "ACTIVATING",
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6748
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ACTIVE: "ACTIVE",
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6749
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DELETED: "DELETED",
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6750
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DELETING: "DELETING",
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6751
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+
FAILED: "FAILED",
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6752
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PENDING: "PENDING",
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6753
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};
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6754
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+
const ReadSetActivationJobStatus = {
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6755
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CANCELLED: "CANCELLED",
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6756
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+
CANCELLING: "CANCELLING",
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6757
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+
COMPLETED: "COMPLETED",
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6758
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+
COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
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6759
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FAILED: "FAILED",
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6760
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+
IN_PROGRESS: "IN_PROGRESS",
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6761
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+
SUBMITTED: "SUBMITTED",
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6762
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};
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6763
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const ReadSetActivationJobItemStatus = {
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6764
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FAILED: "FAILED",
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6765
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FINISHED: "FINISHED",
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6766
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+
IN_PROGRESS: "IN_PROGRESS",
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6767
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+
NOT_STARTED: "NOT_STARTED",
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6768
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};
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6769
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const JobStatus = {
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6770
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CANCELLED: "CANCELLED",
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6771
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+
COMPLETED: "COMPLETED",
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6772
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+
COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
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6773
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FAILED: "FAILED",
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6774
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+
IN_PROGRESS: "IN_PROGRESS",
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6775
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SUBMITTED: "SUBMITTED",
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6776
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};
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6777
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const EncryptionType = {
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6778
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KMS: "KMS",
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6779
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};
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6780
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const StoreFormat = {
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6781
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GFF: "GFF",
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6782
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TSV: "TSV",
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6783
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+
VCF: "VCF",
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6784
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};
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6785
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const AnnotationType = {
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6786
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CHR_POS: "CHR_POS",
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6787
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CHR_POS_REF_ALT: "CHR_POS_REF_ALT",
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6788
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CHR_START_END_ONE_BASE: "CHR_START_END_ONE_BASE",
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6789
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CHR_START_END_REF_ALT_ONE_BASE: "CHR_START_END_REF_ALT_ONE_BASE",
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6790
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CHR_START_END_REF_ALT_ZERO_BASE: "CHR_START_END_REF_ALT_ZERO_BASE",
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6791
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CHR_START_END_ZERO_BASE: "CHR_START_END_ZERO_BASE",
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6792
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GENERIC: "GENERIC",
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6793
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};
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6794
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const FormatToHeaderKey = {
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6795
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ALT: "ALT",
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6796
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CHR: "CHR",
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6797
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END: "END",
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6798
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POS: "POS",
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6799
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REF: "REF",
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6800
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START: "START",
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6801
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};
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6802
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const SchemaValueType = {
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6803
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BOOLEAN: "BOOLEAN",
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6804
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DOUBLE: "DOUBLE",
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6805
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FLOAT: "FLOAT",
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6806
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INT: "INT",
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6807
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LONG: "LONG",
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6808
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STRING: "STRING",
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6809
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};
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6810
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const StoreStatus = {
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6811
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ACTIVE: "ACTIVE",
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6812
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CREATING: "CREATING",
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6813
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DELETING: "DELETING",
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6814
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FAILED: "FAILED",
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6815
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UPDATING: "UPDATING",
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6816
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};
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6817
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const VersionStatus = {
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6818
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ACTIVE: "ACTIVE",
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6819
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CREATING: "CREATING",
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6820
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DELETING: "DELETING",
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6821
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FAILED: "FAILED",
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6822
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UPDATING: "UPDATING",
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6823
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};
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6824
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const CacheBehavior = {
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6825
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CACHE_ALWAYS: "CACHE_ALWAYS",
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6826
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CACHE_ON_FAILURE: "CACHE_ON_FAILURE",
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6827
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};
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6828
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const ReadSetPartSource = {
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6829
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SOURCE1: "SOURCE1",
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6830
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SOURCE2: "SOURCE2",
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6831
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};
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6832
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const FileType = {
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6833
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BAM: "BAM",
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6834
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CRAM: "CRAM",
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6835
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FASTQ: "FASTQ",
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6836
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UBAM: "UBAM",
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6837
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};
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6838
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const RunCacheStatus = {
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6839
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ACTIVE: "ACTIVE",
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6840
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DELETED: "DELETED",
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6841
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FAILED: "FAILED",
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6842
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};
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6843
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const ETagAlgorithmFamily = {
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6844
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MD5UP: "MD5up",
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6845
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+
SHA256UP: "SHA256up",
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6846
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SHA512UP: "SHA512up",
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6847
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+
};
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6848
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+
const SequenceStoreStatus = {
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6849
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ACTIVE: "ACTIVE",
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6850
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CREATING: "CREATING",
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6851
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DELETING: "DELETING",
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6852
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FAILED: "FAILED",
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6853
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UPDATING: "UPDATING",
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6854
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};
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6855
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const SourceReferenceType = {
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6856
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BRANCH: "BRANCH",
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6857
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COMMIT: "COMMIT",
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6858
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TAG: "TAG",
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6859
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};
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6860
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const WorkflowEngine = {
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6861
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CWL: "CWL",
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6862
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NEXTFLOW: "NEXTFLOW",
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6863
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WDL: "WDL",
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6864
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WDL_LENIENT: "WDL_LENIENT",
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6865
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};
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6866
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const StorageType = {
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6867
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DYNAMIC: "DYNAMIC",
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6868
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STATIC: "STATIC",
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6869
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};
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6870
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const WorkflowStatus = {
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6871
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ACTIVE: "ACTIVE",
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6872
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CREATING: "CREATING",
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6873
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DELETED: "DELETED",
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6874
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FAILED: "FAILED",
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6875
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INACTIVE: "INACTIVE",
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6876
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UPDATING: "UPDATING",
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6877
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};
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6878
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const CreationType = {
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6879
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IMPORT: "IMPORT",
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6880
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UPLOAD: "UPLOAD",
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6881
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};
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6882
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const ETagAlgorithm = {
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6883
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BAM_MD5UP: "BAM_MD5up",
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6884
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BAM_SHA256UP: "BAM_SHA256up",
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6885
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BAM_SHA512UP: "BAM_SHA512up",
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6886
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CRAM_MD5UP: "CRAM_MD5up",
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6887
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CRAM_SHA256UP: "CRAM_SHA256up",
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6888
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CRAM_SHA512UP: "CRAM_SHA512up",
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6889
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FASTQ_MD5UP: "FASTQ_MD5up",
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6890
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FASTQ_SHA256UP: "FASTQ_SHA256up",
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6891
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FASTQ_SHA512UP: "FASTQ_SHA512up",
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6892
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};
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6893
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const ReadSetExportJobItemStatus = {
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6894
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FAILED: "FAILED",
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6895
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FINISHED: "FINISHED",
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6896
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IN_PROGRESS: "IN_PROGRESS",
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6897
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NOT_STARTED: "NOT_STARTED",
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6898
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};
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6899
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const ReadSetExportJobStatus = {
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6900
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CANCELLED: "CANCELLED",
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6901
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CANCELLING: "CANCELLING",
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6902
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COMPLETED: "COMPLETED",
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6903
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COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
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6904
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FAILED: "FAILED",
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6905
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IN_PROGRESS: "IN_PROGRESS",
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6906
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SUBMITTED: "SUBMITTED",
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6907
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};
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6908
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const ShareResourceType = {
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6909
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ANNOTATION_STORE: "ANNOTATION_STORE",
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6910
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VARIANT_STORE: "VARIANT_STORE",
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6911
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WORKFLOW: "WORKFLOW",
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6912
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};
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6913
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const ReadSetFile = {
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6914
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INDEX: "INDEX",
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6915
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SOURCE1: "SOURCE1",
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6916
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SOURCE2: "SOURCE2",
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6917
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};
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6918
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const ReadSetImportJobItemStatus = {
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6919
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FAILED: "FAILED",
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6920
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FINISHED: "FINISHED",
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6921
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IN_PROGRESS: "IN_PROGRESS",
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6922
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NOT_STARTED: "NOT_STARTED",
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6923
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};
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6924
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const ReadSetImportJobStatus = {
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6925
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CANCELLED: "CANCELLED",
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6926
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CANCELLING: "CANCELLING",
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6927
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COMPLETED: "COMPLETED",
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6928
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COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
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6929
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+
FAILED: "FAILED",
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6930
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+
IN_PROGRESS: "IN_PROGRESS",
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6931
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+
SUBMITTED: "SUBMITTED",
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6932
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+
};
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6933
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+
const ReadSetStatus = {
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6934
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ACTIVATING: "ACTIVATING",
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6935
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+
ACTIVE: "ACTIVE",
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6936
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+
ARCHIVED: "ARCHIVED",
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6937
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+
DELETED: "DELETED",
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6938
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+
DELETING: "DELETING",
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6939
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+
PROCESSING_UPLOAD: "PROCESSING_UPLOAD",
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6940
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+
UPLOAD_FAILED: "UPLOAD_FAILED",
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6941
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+
};
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6942
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const ReferenceFile = {
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6943
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INDEX: "INDEX",
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6944
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SOURCE: "SOURCE",
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6945
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+
};
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6946
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const ReferenceImportJobItemStatus = {
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6947
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FAILED: "FAILED",
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6948
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FINISHED: "FINISHED",
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6949
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+
IN_PROGRESS: "IN_PROGRESS",
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6950
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+
NOT_STARTED: "NOT_STARTED",
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6951
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+
};
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6952
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+
const ReferenceImportJobStatus = {
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6953
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CANCELLED: "CANCELLED",
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6954
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+
CANCELLING: "CANCELLING",
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6955
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+
COMPLETED: "COMPLETED",
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6956
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+
COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
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6957
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+
FAILED: "FAILED",
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6958
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+
IN_PROGRESS: "IN_PROGRESS",
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6959
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+
SUBMITTED: "SUBMITTED",
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6960
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+
};
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6961
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const ReferenceCreationType = {
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6962
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IMPORT: "IMPORT",
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6963
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+
};
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6964
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const ReferenceStatus = {
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6965
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+
ACTIVE: "ACTIVE",
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6966
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+
DELETED: "DELETED",
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6967
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+
DELETING: "DELETING",
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6968
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+
};
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6969
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const RunExport = {
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6970
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DEFINITION: "DEFINITION",
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6971
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+
};
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6972
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const RunLogLevel = {
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6973
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+
ALL: "ALL",
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6974
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+
ERROR: "ERROR",
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6975
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+
FATAL: "FATAL",
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6976
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+
OFF: "OFF",
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6977
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+
};
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6978
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+
const RunRetentionMode = {
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6979
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REMOVE: "REMOVE",
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6980
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+
RETAIN: "RETAIN",
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6981
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+
};
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6982
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+
const RunStatus = {
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6983
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+
CANCELLED: "CANCELLED",
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6984
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+
COMPLETED: "COMPLETED",
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6985
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+
DELETED: "DELETED",
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6986
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+
FAILED: "FAILED",
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6987
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+
PENDING: "PENDING",
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6988
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+
RUNNING: "RUNNING",
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6989
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+
STARTING: "STARTING",
|
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6990
|
+
STOPPING: "STOPPING",
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6991
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+
};
|
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6992
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+
const WorkflowType = {
|
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6993
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+
PRIVATE: "PRIVATE",
|
|
6994
|
+
READY2RUN: "READY2RUN",
|
|
6995
|
+
};
|
|
6996
|
+
const TaskStatus = {
|
|
6997
|
+
CANCELLED: "CANCELLED",
|
|
6998
|
+
COMPLETED: "COMPLETED",
|
|
6999
|
+
FAILED: "FAILED",
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|
7000
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+
PENDING: "PENDING",
|
|
7001
|
+
RUNNING: "RUNNING",
|
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7002
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+
STARTING: "STARTING",
|
|
7003
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+
STOPPING: "STOPPING",
|
|
7004
|
+
};
|
|
6743
7005
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const StoreType = {
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|
6744
7006
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REFERENCE_STORE: "REFERENCE_STORE",
|
|
6745
7007
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SEQUENCE_STORE: "SEQUENCE_STORE",
|
|
6746
7008
|
};
|
|
7009
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+
const WorkflowExport = {
|
|
7010
|
+
DEFINITION: "DEFINITION",
|
|
7011
|
+
README: "README",
|
|
7012
|
+
};
|
|
7013
|
+
const ResourceOwner = {
|
|
7014
|
+
OTHER: "OTHER",
|
|
7015
|
+
SELF: "SELF",
|
|
7016
|
+
};
|
|
6747
7017
|
|
|
6748
7018
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Object.defineProperty(exports, "$Command", {
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|
6749
7019
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enumerable: true,
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|
@@ -6754,9 +7024,12 @@ Object.defineProperty(exports, "__Client", {
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|
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6754
7024
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get: function () { return smithyClient.Client; }
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6755
7025
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});
|
|
6756
7026
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exports.AbortMultipartReadSetUploadCommand = AbortMultipartReadSetUploadCommand;
|
|
7027
|
+
exports.Accelerators = Accelerators;
|
|
6757
7028
|
exports.AcceptShareCommand = AcceptShareCommand;
|
|
6758
7029
|
exports.AccessDeniedException = AccessDeniedException$1;
|
|
7030
|
+
exports.AnnotationType = AnnotationType;
|
|
6759
7031
|
exports.BatchDeleteReadSetCommand = BatchDeleteReadSetCommand;
|
|
7032
|
+
exports.CacheBehavior = CacheBehavior;
|
|
6760
7033
|
exports.CancelAnnotationImportJobCommand = CancelAnnotationImportJobCommand;
|
|
6761
7034
|
exports.CancelRunCommand = CancelRunCommand;
|
|
6762
7035
|
exports.CancelVariantImportJobCommand = CancelVariantImportJobCommand;
|
|
@@ -6773,6 +7046,7 @@ exports.CreateShareCommand = CreateShareCommand;
|
|
|
6773
7046
|
exports.CreateVariantStoreCommand = CreateVariantStoreCommand;
|
|
6774
7047
|
exports.CreateWorkflowCommand = CreateWorkflowCommand;
|
|
6775
7048
|
exports.CreateWorkflowVersionCommand = CreateWorkflowVersionCommand;
|
|
7049
|
+
exports.CreationType = CreationType;
|
|
6776
7050
|
exports.DeleteAnnotationStoreCommand = DeleteAnnotationStoreCommand;
|
|
6777
7051
|
exports.DeleteAnnotationStoreVersionsCommand = DeleteAnnotationStoreVersionsCommand;
|
|
6778
7052
|
exports.DeleteReferenceCommand = DeleteReferenceCommand;
|
|
@@ -6786,6 +7060,11 @@ exports.DeleteShareCommand = DeleteShareCommand;
|
|
|
6786
7060
|
exports.DeleteVariantStoreCommand = DeleteVariantStoreCommand;
|
|
6787
7061
|
exports.DeleteWorkflowCommand = DeleteWorkflowCommand;
|
|
6788
7062
|
exports.DeleteWorkflowVersionCommand = DeleteWorkflowVersionCommand;
|
|
7063
|
+
exports.ETagAlgorithm = ETagAlgorithm;
|
|
7064
|
+
exports.ETagAlgorithmFamily = ETagAlgorithmFamily;
|
|
7065
|
+
exports.EncryptionType = EncryptionType;
|
|
7066
|
+
exports.FileType = FileType;
|
|
7067
|
+
exports.FormatToHeaderKey = FormatToHeaderKey;
|
|
6789
7068
|
exports.GetAnnotationImportJobCommand = GetAnnotationImportJobCommand;
|
|
6790
7069
|
exports.GetAnnotationStoreCommand = GetAnnotationStoreCommand;
|
|
6791
7070
|
exports.GetAnnotationStoreVersionCommand = GetAnnotationStoreVersionCommand;
|
|
@@ -6810,6 +7089,7 @@ exports.GetVariantStoreCommand = GetVariantStoreCommand;
|
|
|
6810
7089
|
exports.GetWorkflowCommand = GetWorkflowCommand;
|
|
6811
7090
|
exports.GetWorkflowVersionCommand = GetWorkflowVersionCommand;
|
|
6812
7091
|
exports.InternalServerException = InternalServerException$1;
|
|
7092
|
+
exports.JobStatus = JobStatus;
|
|
6813
7093
|
exports.ListAnnotationImportJobsCommand = ListAnnotationImportJobsCommand;
|
|
6814
7094
|
exports.ListAnnotationStoreVersionsCommand = ListAnnotationStoreVersionsCommand;
|
|
6815
7095
|
exports.ListAnnotationStoresCommand = ListAnnotationStoresCommand;
|
|
@@ -6839,9 +7119,34 @@ exports.OmicsClient = OmicsClient;
|
|
|
6839
7119
|
exports.OmicsServiceException = OmicsServiceException$1;
|
|
6840
7120
|
exports.PutS3AccessPolicyCommand = PutS3AccessPolicyCommand;
|
|
6841
7121
|
exports.RangeNotSatisfiableException = RangeNotSatisfiableException$1;
|
|
7122
|
+
exports.ReadSetActivationJobItemStatus = ReadSetActivationJobItemStatus;
|
|
7123
|
+
exports.ReadSetActivationJobStatus = ReadSetActivationJobStatus;
|
|
7124
|
+
exports.ReadSetExportJobItemStatus = ReadSetExportJobItemStatus;
|
|
7125
|
+
exports.ReadSetExportJobStatus = ReadSetExportJobStatus;
|
|
7126
|
+
exports.ReadSetFile = ReadSetFile;
|
|
7127
|
+
exports.ReadSetImportJobItemStatus = ReadSetImportJobItemStatus;
|
|
7128
|
+
exports.ReadSetImportJobStatus = ReadSetImportJobStatus;
|
|
7129
|
+
exports.ReadSetPartSource = ReadSetPartSource;
|
|
7130
|
+
exports.ReadSetStatus = ReadSetStatus;
|
|
7131
|
+
exports.ReferenceCreationType = ReferenceCreationType;
|
|
7132
|
+
exports.ReferenceFile = ReferenceFile;
|
|
7133
|
+
exports.ReferenceImportJobItemStatus = ReferenceImportJobItemStatus;
|
|
7134
|
+
exports.ReferenceImportJobStatus = ReferenceImportJobStatus;
|
|
7135
|
+
exports.ReferenceStatus = ReferenceStatus;
|
|
6842
7136
|
exports.RequestTimeoutException = RequestTimeoutException$1;
|
|
6843
7137
|
exports.ResourceNotFoundException = ResourceNotFoundException$1;
|
|
7138
|
+
exports.ResourceOwner = ResourceOwner;
|
|
7139
|
+
exports.RunCacheStatus = RunCacheStatus;
|
|
7140
|
+
exports.RunExport = RunExport;
|
|
7141
|
+
exports.RunLogLevel = RunLogLevel;
|
|
7142
|
+
exports.RunRetentionMode = RunRetentionMode;
|
|
7143
|
+
exports.RunStatus = RunStatus;
|
|
7144
|
+
exports.SchemaValueType = SchemaValueType;
|
|
7145
|
+
exports.SequenceStoreStatus = SequenceStoreStatus;
|
|
6844
7146
|
exports.ServiceQuotaExceededException = ServiceQuotaExceededException$1;
|
|
7147
|
+
exports.ShareResourceType = ShareResourceType;
|
|
7148
|
+
exports.ShareStatus = ShareStatus;
|
|
7149
|
+
exports.SourceReferenceType = SourceReferenceType;
|
|
6845
7150
|
exports.StartAnnotationImportJobCommand = StartAnnotationImportJobCommand;
|
|
6846
7151
|
exports.StartReadSetActivationJobCommand = StartReadSetActivationJobCommand;
|
|
6847
7152
|
exports.StartReadSetExportJobCommand = StartReadSetExportJobCommand;
|
|
@@ -6849,8 +7154,12 @@ exports.StartReadSetImportJobCommand = StartReadSetImportJobCommand;
|
|
|
6849
7154
|
exports.StartReferenceImportJobCommand = StartReferenceImportJobCommand;
|
|
6850
7155
|
exports.StartRunCommand = StartRunCommand;
|
|
6851
7156
|
exports.StartVariantImportJobCommand = StartVariantImportJobCommand;
|
|
7157
|
+
exports.StorageType = StorageType;
|
|
7158
|
+
exports.StoreFormat = StoreFormat;
|
|
7159
|
+
exports.StoreStatus = StoreStatus;
|
|
6852
7160
|
exports.StoreType = StoreType;
|
|
6853
7161
|
exports.TagResourceCommand = TagResourceCommand;
|
|
7162
|
+
exports.TaskStatus = TaskStatus;
|
|
6854
7163
|
exports.ThrottlingException = ThrottlingException$1;
|
|
6855
7164
|
exports.UntagResourceCommand = UntagResourceCommand;
|
|
6856
7165
|
exports.UpdateAnnotationStoreCommand = UpdateAnnotationStoreCommand;
|
|
@@ -6863,6 +7172,11 @@ exports.UpdateWorkflowCommand = UpdateWorkflowCommand;
|
|
|
6863
7172
|
exports.UpdateWorkflowVersionCommand = UpdateWorkflowVersionCommand;
|
|
6864
7173
|
exports.UploadReadSetPartCommand = UploadReadSetPartCommand;
|
|
6865
7174
|
exports.ValidationException = ValidationException$1;
|
|
7175
|
+
exports.VersionStatus = VersionStatus;
|
|
7176
|
+
exports.WorkflowEngine = WorkflowEngine;
|
|
7177
|
+
exports.WorkflowExport = WorkflowExport;
|
|
7178
|
+
exports.WorkflowStatus = WorkflowStatus;
|
|
7179
|
+
exports.WorkflowType = WorkflowType;
|
|
6866
7180
|
exports.paginateListAnnotationImportJobs = paginateListAnnotationImportJobs;
|
|
6867
7181
|
exports.paginateListAnnotationStoreVersions = paginateListAnnotationStoreVersions;
|
|
6868
7182
|
exports.paginateListAnnotationStores = paginateListAnnotationStores;
|
package/dist-es/models/enums.js
CHANGED
|
@@ -1,4 +1,274 @@
|
|
|
1
|
+
export const Accelerators = {
|
|
2
|
+
GPU: "GPU",
|
|
3
|
+
};
|
|
4
|
+
export const ShareStatus = {
|
|
5
|
+
ACTIVATING: "ACTIVATING",
|
|
6
|
+
ACTIVE: "ACTIVE",
|
|
7
|
+
DELETED: "DELETED",
|
|
8
|
+
DELETING: "DELETING",
|
|
9
|
+
FAILED: "FAILED",
|
|
10
|
+
PENDING: "PENDING",
|
|
11
|
+
};
|
|
12
|
+
export const ReadSetActivationJobStatus = {
|
|
13
|
+
CANCELLED: "CANCELLED",
|
|
14
|
+
CANCELLING: "CANCELLING",
|
|
15
|
+
COMPLETED: "COMPLETED",
|
|
16
|
+
COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
|
|
17
|
+
FAILED: "FAILED",
|
|
18
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
19
|
+
SUBMITTED: "SUBMITTED",
|
|
20
|
+
};
|
|
21
|
+
export const ReadSetActivationJobItemStatus = {
|
|
22
|
+
FAILED: "FAILED",
|
|
23
|
+
FINISHED: "FINISHED",
|
|
24
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
25
|
+
NOT_STARTED: "NOT_STARTED",
|
|
26
|
+
};
|
|
27
|
+
export const JobStatus = {
|
|
28
|
+
CANCELLED: "CANCELLED",
|
|
29
|
+
COMPLETED: "COMPLETED",
|
|
30
|
+
COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
|
|
31
|
+
FAILED: "FAILED",
|
|
32
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
33
|
+
SUBMITTED: "SUBMITTED",
|
|
34
|
+
};
|
|
35
|
+
export const EncryptionType = {
|
|
36
|
+
KMS: "KMS",
|
|
37
|
+
};
|
|
38
|
+
export const StoreFormat = {
|
|
39
|
+
GFF: "GFF",
|
|
40
|
+
TSV: "TSV",
|
|
41
|
+
VCF: "VCF",
|
|
42
|
+
};
|
|
43
|
+
export const AnnotationType = {
|
|
44
|
+
CHR_POS: "CHR_POS",
|
|
45
|
+
CHR_POS_REF_ALT: "CHR_POS_REF_ALT",
|
|
46
|
+
CHR_START_END_ONE_BASE: "CHR_START_END_ONE_BASE",
|
|
47
|
+
CHR_START_END_REF_ALT_ONE_BASE: "CHR_START_END_REF_ALT_ONE_BASE",
|
|
48
|
+
CHR_START_END_REF_ALT_ZERO_BASE: "CHR_START_END_REF_ALT_ZERO_BASE",
|
|
49
|
+
CHR_START_END_ZERO_BASE: "CHR_START_END_ZERO_BASE",
|
|
50
|
+
GENERIC: "GENERIC",
|
|
51
|
+
};
|
|
52
|
+
export const FormatToHeaderKey = {
|
|
53
|
+
ALT: "ALT",
|
|
54
|
+
CHR: "CHR",
|
|
55
|
+
END: "END",
|
|
56
|
+
POS: "POS",
|
|
57
|
+
REF: "REF",
|
|
58
|
+
START: "START",
|
|
59
|
+
};
|
|
60
|
+
export const SchemaValueType = {
|
|
61
|
+
BOOLEAN: "BOOLEAN",
|
|
62
|
+
DOUBLE: "DOUBLE",
|
|
63
|
+
FLOAT: "FLOAT",
|
|
64
|
+
INT: "INT",
|
|
65
|
+
LONG: "LONG",
|
|
66
|
+
STRING: "STRING",
|
|
67
|
+
};
|
|
68
|
+
export const StoreStatus = {
|
|
69
|
+
ACTIVE: "ACTIVE",
|
|
70
|
+
CREATING: "CREATING",
|
|
71
|
+
DELETING: "DELETING",
|
|
72
|
+
FAILED: "FAILED",
|
|
73
|
+
UPDATING: "UPDATING",
|
|
74
|
+
};
|
|
75
|
+
export const VersionStatus = {
|
|
76
|
+
ACTIVE: "ACTIVE",
|
|
77
|
+
CREATING: "CREATING",
|
|
78
|
+
DELETING: "DELETING",
|
|
79
|
+
FAILED: "FAILED",
|
|
80
|
+
UPDATING: "UPDATING",
|
|
81
|
+
};
|
|
82
|
+
export const CacheBehavior = {
|
|
83
|
+
CACHE_ALWAYS: "CACHE_ALWAYS",
|
|
84
|
+
CACHE_ON_FAILURE: "CACHE_ON_FAILURE",
|
|
85
|
+
};
|
|
86
|
+
export const ReadSetPartSource = {
|
|
87
|
+
SOURCE1: "SOURCE1",
|
|
88
|
+
SOURCE2: "SOURCE2",
|
|
89
|
+
};
|
|
90
|
+
export const FileType = {
|
|
91
|
+
BAM: "BAM",
|
|
92
|
+
CRAM: "CRAM",
|
|
93
|
+
FASTQ: "FASTQ",
|
|
94
|
+
UBAM: "UBAM",
|
|
95
|
+
};
|
|
96
|
+
export const RunCacheStatus = {
|
|
97
|
+
ACTIVE: "ACTIVE",
|
|
98
|
+
DELETED: "DELETED",
|
|
99
|
+
FAILED: "FAILED",
|
|
100
|
+
};
|
|
101
|
+
export const ETagAlgorithmFamily = {
|
|
102
|
+
MD5UP: "MD5up",
|
|
103
|
+
SHA256UP: "SHA256up",
|
|
104
|
+
SHA512UP: "SHA512up",
|
|
105
|
+
};
|
|
106
|
+
export const SequenceStoreStatus = {
|
|
107
|
+
ACTIVE: "ACTIVE",
|
|
108
|
+
CREATING: "CREATING",
|
|
109
|
+
DELETING: "DELETING",
|
|
110
|
+
FAILED: "FAILED",
|
|
111
|
+
UPDATING: "UPDATING",
|
|
112
|
+
};
|
|
113
|
+
export const SourceReferenceType = {
|
|
114
|
+
BRANCH: "BRANCH",
|
|
115
|
+
COMMIT: "COMMIT",
|
|
116
|
+
TAG: "TAG",
|
|
117
|
+
};
|
|
118
|
+
export const WorkflowEngine = {
|
|
119
|
+
CWL: "CWL",
|
|
120
|
+
NEXTFLOW: "NEXTFLOW",
|
|
121
|
+
WDL: "WDL",
|
|
122
|
+
WDL_LENIENT: "WDL_LENIENT",
|
|
123
|
+
};
|
|
124
|
+
export const StorageType = {
|
|
125
|
+
DYNAMIC: "DYNAMIC",
|
|
126
|
+
STATIC: "STATIC",
|
|
127
|
+
};
|
|
128
|
+
export const WorkflowStatus = {
|
|
129
|
+
ACTIVE: "ACTIVE",
|
|
130
|
+
CREATING: "CREATING",
|
|
131
|
+
DELETED: "DELETED",
|
|
132
|
+
FAILED: "FAILED",
|
|
133
|
+
INACTIVE: "INACTIVE",
|
|
134
|
+
UPDATING: "UPDATING",
|
|
135
|
+
};
|
|
136
|
+
export const CreationType = {
|
|
137
|
+
IMPORT: "IMPORT",
|
|
138
|
+
UPLOAD: "UPLOAD",
|
|
139
|
+
};
|
|
140
|
+
export const ETagAlgorithm = {
|
|
141
|
+
BAM_MD5UP: "BAM_MD5up",
|
|
142
|
+
BAM_SHA256UP: "BAM_SHA256up",
|
|
143
|
+
BAM_SHA512UP: "BAM_SHA512up",
|
|
144
|
+
CRAM_MD5UP: "CRAM_MD5up",
|
|
145
|
+
CRAM_SHA256UP: "CRAM_SHA256up",
|
|
146
|
+
CRAM_SHA512UP: "CRAM_SHA512up",
|
|
147
|
+
FASTQ_MD5UP: "FASTQ_MD5up",
|
|
148
|
+
FASTQ_SHA256UP: "FASTQ_SHA256up",
|
|
149
|
+
FASTQ_SHA512UP: "FASTQ_SHA512up",
|
|
150
|
+
};
|
|
151
|
+
export const ReadSetExportJobItemStatus = {
|
|
152
|
+
FAILED: "FAILED",
|
|
153
|
+
FINISHED: "FINISHED",
|
|
154
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
155
|
+
NOT_STARTED: "NOT_STARTED",
|
|
156
|
+
};
|
|
157
|
+
export const ReadSetExportJobStatus = {
|
|
158
|
+
CANCELLED: "CANCELLED",
|
|
159
|
+
CANCELLING: "CANCELLING",
|
|
160
|
+
COMPLETED: "COMPLETED",
|
|
161
|
+
COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
|
|
162
|
+
FAILED: "FAILED",
|
|
163
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
164
|
+
SUBMITTED: "SUBMITTED",
|
|
165
|
+
};
|
|
166
|
+
export const ShareResourceType = {
|
|
167
|
+
ANNOTATION_STORE: "ANNOTATION_STORE",
|
|
168
|
+
VARIANT_STORE: "VARIANT_STORE",
|
|
169
|
+
WORKFLOW: "WORKFLOW",
|
|
170
|
+
};
|
|
171
|
+
export const ReadSetFile = {
|
|
172
|
+
INDEX: "INDEX",
|
|
173
|
+
SOURCE1: "SOURCE1",
|
|
174
|
+
SOURCE2: "SOURCE2",
|
|
175
|
+
};
|
|
176
|
+
export const ReadSetImportJobItemStatus = {
|
|
177
|
+
FAILED: "FAILED",
|
|
178
|
+
FINISHED: "FINISHED",
|
|
179
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
180
|
+
NOT_STARTED: "NOT_STARTED",
|
|
181
|
+
};
|
|
182
|
+
export const ReadSetImportJobStatus = {
|
|
183
|
+
CANCELLED: "CANCELLED",
|
|
184
|
+
CANCELLING: "CANCELLING",
|
|
185
|
+
COMPLETED: "COMPLETED",
|
|
186
|
+
COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
|
|
187
|
+
FAILED: "FAILED",
|
|
188
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
189
|
+
SUBMITTED: "SUBMITTED",
|
|
190
|
+
};
|
|
191
|
+
export const ReadSetStatus = {
|
|
192
|
+
ACTIVATING: "ACTIVATING",
|
|
193
|
+
ACTIVE: "ACTIVE",
|
|
194
|
+
ARCHIVED: "ARCHIVED",
|
|
195
|
+
DELETED: "DELETED",
|
|
196
|
+
DELETING: "DELETING",
|
|
197
|
+
PROCESSING_UPLOAD: "PROCESSING_UPLOAD",
|
|
198
|
+
UPLOAD_FAILED: "UPLOAD_FAILED",
|
|
199
|
+
};
|
|
200
|
+
export const ReferenceFile = {
|
|
201
|
+
INDEX: "INDEX",
|
|
202
|
+
SOURCE: "SOURCE",
|
|
203
|
+
};
|
|
204
|
+
export const ReferenceImportJobItemStatus = {
|
|
205
|
+
FAILED: "FAILED",
|
|
206
|
+
FINISHED: "FINISHED",
|
|
207
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
208
|
+
NOT_STARTED: "NOT_STARTED",
|
|
209
|
+
};
|
|
210
|
+
export const ReferenceImportJobStatus = {
|
|
211
|
+
CANCELLED: "CANCELLED",
|
|
212
|
+
CANCELLING: "CANCELLING",
|
|
213
|
+
COMPLETED: "COMPLETED",
|
|
214
|
+
COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
|
|
215
|
+
FAILED: "FAILED",
|
|
216
|
+
IN_PROGRESS: "IN_PROGRESS",
|
|
217
|
+
SUBMITTED: "SUBMITTED",
|
|
218
|
+
};
|
|
219
|
+
export const ReferenceCreationType = {
|
|
220
|
+
IMPORT: "IMPORT",
|
|
221
|
+
};
|
|
222
|
+
export const ReferenceStatus = {
|
|
223
|
+
ACTIVE: "ACTIVE",
|
|
224
|
+
DELETED: "DELETED",
|
|
225
|
+
DELETING: "DELETING",
|
|
226
|
+
};
|
|
227
|
+
export const RunExport = {
|
|
228
|
+
DEFINITION: "DEFINITION",
|
|
229
|
+
};
|
|
230
|
+
export const RunLogLevel = {
|
|
231
|
+
ALL: "ALL",
|
|
232
|
+
ERROR: "ERROR",
|
|
233
|
+
FATAL: "FATAL",
|
|
234
|
+
OFF: "OFF",
|
|
235
|
+
};
|
|
236
|
+
export const RunRetentionMode = {
|
|
237
|
+
REMOVE: "REMOVE",
|
|
238
|
+
RETAIN: "RETAIN",
|
|
239
|
+
};
|
|
240
|
+
export const RunStatus = {
|
|
241
|
+
CANCELLED: "CANCELLED",
|
|
242
|
+
COMPLETED: "COMPLETED",
|
|
243
|
+
DELETED: "DELETED",
|
|
244
|
+
FAILED: "FAILED",
|
|
245
|
+
PENDING: "PENDING",
|
|
246
|
+
RUNNING: "RUNNING",
|
|
247
|
+
STARTING: "STARTING",
|
|
248
|
+
STOPPING: "STOPPING",
|
|
249
|
+
};
|
|
250
|
+
export const WorkflowType = {
|
|
251
|
+
PRIVATE: "PRIVATE",
|
|
252
|
+
READY2RUN: "READY2RUN",
|
|
253
|
+
};
|
|
254
|
+
export const TaskStatus = {
|
|
255
|
+
CANCELLED: "CANCELLED",
|
|
256
|
+
COMPLETED: "COMPLETED",
|
|
257
|
+
FAILED: "FAILED",
|
|
258
|
+
PENDING: "PENDING",
|
|
259
|
+
RUNNING: "RUNNING",
|
|
260
|
+
STARTING: "STARTING",
|
|
261
|
+
STOPPING: "STOPPING",
|
|
262
|
+
};
|
|
1
263
|
export const StoreType = {
|
|
2
264
|
REFERENCE_STORE: "REFERENCE_STORE",
|
|
3
265
|
SEQUENCE_STORE: "SEQUENCE_STORE",
|
|
4
266
|
};
|
|
267
|
+
export const WorkflowExport = {
|
|
268
|
+
DEFINITION: "DEFINITION",
|
|
269
|
+
README: "README",
|
|
270
|
+
};
|
|
271
|
+
export const ResourceOwner = {
|
|
272
|
+
OTHER: "OTHER",
|
|
273
|
+
SELF: "SELF",
|
|
274
|
+
};
|