@aws-sdk/client-omics 3.848.0 → 3.855.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (45) hide show
  1. package/README.md +1 -1
  2. package/dist-cjs/index.js +36 -5
  3. package/dist-es/commands/UploadReadSetPartCommand.js +1 -1
  4. package/dist-es/models/models_0.js +6 -3
  5. package/dist-es/models/models_1.js +3 -1
  6. package/dist-es/protocols/Aws_restJson1.js +19 -0
  7. package/dist-types/Omics.d.ts +1 -1
  8. package/dist-types/OmicsClient.d.ts +1 -1
  9. package/dist-types/commands/CancelRunCommand.d.ts +1 -1
  10. package/dist-types/commands/CreateRunCacheCommand.d.ts +1 -1
  11. package/dist-types/commands/CreateRunGroupCommand.d.ts +1 -1
  12. package/dist-types/commands/CreateWorkflowCommand.d.ts +17 -1
  13. package/dist-types/commands/CreateWorkflowVersionCommand.d.ts +16 -1
  14. package/dist-types/commands/DeleteRunCacheCommand.d.ts +1 -1
  15. package/dist-types/commands/DeleteRunCommand.d.ts +1 -1
  16. package/dist-types/commands/DeleteRunGroupCommand.d.ts +1 -1
  17. package/dist-types/commands/DeleteWorkflowCommand.d.ts +1 -1
  18. package/dist-types/commands/DeleteWorkflowVersionCommand.d.ts +1 -1
  19. package/dist-types/commands/GetRunCacheCommand.d.ts +1 -1
  20. package/dist-types/commands/GetRunCommand.d.ts +1 -1
  21. package/dist-types/commands/GetRunGroupCommand.d.ts +1 -1
  22. package/dist-types/commands/GetRunTaskCommand.d.ts +1 -1
  23. package/dist-types/commands/GetWorkflowCommand.d.ts +13 -1
  24. package/dist-types/commands/GetWorkflowVersionCommand.d.ts +13 -1
  25. package/dist-types/commands/ListRunCachesCommand.d.ts +1 -1
  26. package/dist-types/commands/ListRunGroupsCommand.d.ts +1 -1
  27. package/dist-types/commands/ListRunTasksCommand.d.ts +1 -1
  28. package/dist-types/commands/ListRunsCommand.d.ts +1 -1
  29. package/dist-types/commands/ListWorkflowVersionsCommand.d.ts +1 -1
  30. package/dist-types/commands/ListWorkflowsCommand.d.ts +1 -1
  31. package/dist-types/commands/StartRunCommand.d.ts +1 -1
  32. package/dist-types/commands/TagResourceCommand.d.ts +1 -1
  33. package/dist-types/commands/UpdateRunCacheCommand.d.ts +1 -1
  34. package/dist-types/commands/UpdateRunGroupCommand.d.ts +1 -1
  35. package/dist-types/commands/UpdateWorkflowCommand.d.ts +2 -1
  36. package/dist-types/commands/UpdateWorkflowVersionCommand.d.ts +2 -1
  37. package/dist-types/commands/UploadReadSetPartCommand.d.ts +1 -1
  38. package/dist-types/index.d.ts +1 -1
  39. package/dist-types/models/models_0.d.ts +199 -91
  40. package/dist-types/models/models_1.d.ts +76 -1
  41. package/dist-types/ts3.4/commands/TagResourceCommand.d.ts +1 -1
  42. package/dist-types/ts3.4/commands/UploadReadSetPartCommand.d.ts +1 -1
  43. package/dist-types/ts3.4/models/models_0.d.ts +42 -18
  44. package/dist-types/ts3.4/models/models_1.d.ts +27 -1
  45. package/package.json +5 -5
@@ -1,4 +1,65 @@
1
- import { ReferenceItem, StorageType, StoreStatus } from "./models_0";
1
+ import { StreamingBlobTypes } from "@smithy/types";
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+ import { ReadSetPartSource, ReferenceItem, StorageType, StoreStatus } from "./models_0";
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+ /**
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+ * @public
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+ */
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+ export interface UploadReadSetPartRequest {
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+ /**
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+ * <p>The Sequence Store ID used for the multipart upload.</p>
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+ * @public
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+ */
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+ sequenceStoreId: string | undefined;
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+ /**
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+ * <p>The ID for the initiated multipart upload.</p>
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+ * @public
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+ */
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+ uploadId: string | undefined;
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+ /**
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+ * <p>The source file for an upload part.</p>
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+ * @public
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+ */
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+ partSource: ReadSetPartSource | undefined;
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+ /**
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+ * <p>The number of the part being uploaded.</p>
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+ * @public
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+ */
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+ partNumber: number | undefined;
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+ /**
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+ * <p>The read set data to upload for a part.</p>
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+ * @public
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+ */
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+ payload: StreamingBlobTypes | undefined;
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+ }
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+ /**
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+ * @public
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+ */
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+ export interface UploadReadSetPartResponse {
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+ /**
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+ * <p>An identifier used to confirm that parts are being added to the intended upload.</p>
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+ * @public
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+ */
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+ checksum: string | undefined;
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+ }
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+ /**
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+ * @public
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+ */
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+ export interface TagResourceRequest {
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+ /**
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+ * <p>The resource's ARN.</p>
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+ * @public
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+ */
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+ resourceArn: string | undefined;
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+ /**
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+ * <p>Tags for the resource.</p>
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+ * @public
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+ */
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+ tags: Record<string, string> | undefined;
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+ }
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+ /**
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+ * @public
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+ */
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+ export interface TagResourceResponse {
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+ }
2
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  /**
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  * @public
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  */
@@ -154,6 +215,11 @@ export interface UpdateWorkflowRequest {
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  * @public
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  */
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  storageCapacity?: number | undefined;
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+ /**
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+ * <p>The markdown content for the workflow's README file. This provides documentation and usage information for users of the workflow.</p>
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+ * @public
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+ */
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+ readmeMarkdown?: string | undefined;
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  }
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  /**
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  * @public
@@ -184,4 +250,13 @@ export interface UpdateWorkflowVersionRequest {
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  * @public
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  */
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  storageCapacity?: number | undefined;
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+ /**
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+ * <p>The markdown content for the workflow version's README file. This provides documentation and usage information for users of this specific workflow version.</p>
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+ * @public
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+ */
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+ readmeMarkdown?: string | undefined;
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  }
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+ /**
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+ * @internal
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+ */
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+ export declare const UploadReadSetPartRequestFilterSensitiveLog: (obj: UploadReadSetPartRequest) => any;
@@ -1,6 +1,6 @@
1
1
  import { Command as $Command } from "@smithy/smithy-client";
2
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  import { MetadataBearer as __MetadataBearer } from "@smithy/types";
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- import { TagResourceRequest, TagResourceResponse } from "../models/models_0";
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+ import { TagResourceRequest, TagResourceResponse } from "../models/models_1";
4
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  import {
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  OmicsClientResolvedConfig,
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  ServiceInputTypes,
@@ -6,7 +6,7 @@ import {
6
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  import {
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  UploadReadSetPartRequest,
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  UploadReadSetPartResponse,
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- } from "../models/models_0";
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+ } from "../models/models_1";
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  import {
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  OmicsClientResolvedConfig,
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  ServiceInputTypes,
@@ -755,6 +755,23 @@ export interface CreateVariantStoreResponse {
755
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  name: string | undefined;
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  creationTime: Date | undefined;
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  }
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+ export declare const SourceReferenceType: {
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+ readonly BRANCH: "BRANCH";
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+ readonly COMMIT: "COMMIT";
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+ readonly TAG: "TAG";
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+ };
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+ export type SourceReferenceType =
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+ (typeof SourceReferenceType)[keyof typeof SourceReferenceType];
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+ export interface SourceReference {
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+ type: SourceReferenceType | undefined;
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+ value: string | undefined;
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+ }
769
+ export interface DefinitionRepository {
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+ connectionArn: string | undefined;
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+ fullRepositoryId: string | undefined;
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+ sourceReference?: SourceReference | undefined;
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+ excludeFilePatterns?: string[] | undefined;
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+ }
758
775
  export declare const WorkflowEngine: {
759
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  readonly CWL: "CWL";
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  readonly NEXTFLOW: "NEXTFLOW";
@@ -784,6 +801,12 @@ export interface CreateWorkflowRequest {
784
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  requestId?: string | undefined;
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  accelerators?: Accelerators | undefined;
786
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  storageType?: StorageType | undefined;
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+ readmeMarkdown?: string | undefined;
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+ parameterTemplatePath?: string | undefined;
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+ readmePath?: string | undefined;
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+ definitionRepository?: DefinitionRepository | undefined;
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+ workflowBucketOwnerId?: string | undefined;
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+ readmeUri?: string | undefined;
787
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  }
788
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  export declare const WorkflowStatus: {
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  readonly ACTIVE: "ACTIVE";
@@ -817,6 +840,11 @@ export interface CreateWorkflowVersionRequest {
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  storageCapacity?: number | undefined;
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  tags?: Record<string, string> | undefined;
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  workflowBucketOwnerId?: string | undefined;
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+ readmeMarkdown?: string | undefined;
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+ parameterTemplatePath?: string | undefined;
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+ readmePath?: string | undefined;
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+ definitionRepository?: DefinitionRepository | undefined;
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+ readmeUri?: string | undefined;
820
848
  }
821
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  export interface CreateWorkflowVersionResponse {
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  arn?: string | undefined;
@@ -831,6 +859,13 @@ export declare const CreationType: {
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  readonly UPLOAD: "UPLOAD";
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  };
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  export type CreationType = (typeof CreationType)[keyof typeof CreationType];
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+ export interface DefinitionRepositoryDetails {
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+ connectionArn?: string | undefined;
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+ fullRepositoryId?: string | undefined;
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+ sourceReference?: SourceReference | undefined;
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+ providerType?: string | undefined;
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+ providerEndpoint?: string | undefined;
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+ }
834
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  export interface DeleteReferenceRequest {
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  id: string | undefined;
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  referenceStoreId: string | undefined;
@@ -1432,6 +1467,7 @@ export interface GetVariantStoreResponse {
1432
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  }
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  export declare const WorkflowExport: {
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  readonly DEFINITION: "DEFINITION";
1470
+ readonly README: "README";
1435
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  };
1436
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  export type WorkflowExport =
1437
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  (typeof WorkflowExport)[keyof typeof WorkflowExport];
@@ -1461,6 +1497,9 @@ export interface GetWorkflowResponse {
1461
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  accelerators?: Accelerators | undefined;
1462
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  storageType?: StorageType | undefined;
1463
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  uuid?: string | undefined;
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+ readme?: string | undefined;
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+ definitionRepositoryDetails?: DefinitionRepositoryDetails | undefined;
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+ readmePath?: string | undefined;
1464
1503
  }
1465
1504
  export interface GetWorkflowVersionRequest {
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  workflowId: string | undefined;
@@ -1490,6 +1529,9 @@ export interface GetWorkflowVersionResponse {
1490
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  tags?: Record<string, string> | undefined;
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  uuid?: string | undefined;
1492
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  workflowBucketOwnerId?: string | undefined;
1532
+ readme?: string | undefined;
1533
+ definitionRepositoryDetails?: DefinitionRepositoryDetails | undefined;
1534
+ readmePath?: string | undefined;
1493
1535
  }
1494
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  export interface ImportReadSetFilter {
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  status?: ReadSetImportJobStatus | undefined;
@@ -2066,27 +2108,9 @@ export interface UpdateSequenceStoreResponse {
2066
2108
  s3Access?: SequenceStoreS3Access | undefined;
2067
2109
  eTagAlgorithmFamily?: ETagAlgorithmFamily | undefined;
2068
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  }
2069
- export interface UploadReadSetPartRequest {
2070
- sequenceStoreId: string | undefined;
2071
- uploadId: string | undefined;
2072
- partSource: ReadSetPartSource | undefined;
2073
- partNumber: number | undefined;
2074
- payload: StreamingBlobTypes | undefined;
2075
- }
2076
- export interface UploadReadSetPartResponse {
2077
- checksum: string | undefined;
2078
- }
2079
- export interface TagResourceRequest {
2080
- resourceArn: string | undefined;
2081
- tags: Record<string, string> | undefined;
2082
- }
2083
- export interface TagResourceResponse {}
2084
2111
  export declare const GetReadSetResponseFilterSensitiveLog: (
2085
2112
  obj: GetReadSetResponse
2086
2113
  ) => any;
2087
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  export declare const GetReferenceResponseFilterSensitiveLog: (
2088
2115
  obj: GetReferenceResponse
2089
2116
  ) => any;
2090
- export declare const UploadReadSetPartRequestFilterSensitiveLog: (
2091
- obj: UploadReadSetPartRequest
2092
- ) => any;
@@ -1,4 +1,25 @@
1
- import { ReferenceItem, StorageType, StoreStatus } from "./models_0";
1
+ import { StreamingBlobTypes } from "@smithy/types";
2
+ import {
3
+ ReadSetPartSource,
4
+ ReferenceItem,
5
+ StorageType,
6
+ StoreStatus,
7
+ } from "./models_0";
8
+ export interface UploadReadSetPartRequest {
9
+ sequenceStoreId: string | undefined;
10
+ uploadId: string | undefined;
11
+ partSource: ReadSetPartSource | undefined;
12
+ partNumber: number | undefined;
13
+ payload: StreamingBlobTypes | undefined;
14
+ }
15
+ export interface UploadReadSetPartResponse {
16
+ checksum: string | undefined;
17
+ }
18
+ export interface TagResourceRequest {
19
+ resourceArn: string | undefined;
20
+ tags: Record<string, string> | undefined;
21
+ }
22
+ export interface TagResourceResponse {}
2
23
  export interface UntagResourceRequest {
3
24
  resourceArn: string | undefined;
4
25
  tagKeys: string[] | undefined;
@@ -36,6 +57,7 @@ export interface UpdateWorkflowRequest {
36
57
  description?: string | undefined;
37
58
  storageType?: StorageType | undefined;
38
59
  storageCapacity?: number | undefined;
60
+ readmeMarkdown?: string | undefined;
39
61
  }
40
62
  export interface UpdateWorkflowVersionRequest {
41
63
  workflowId: string | undefined;
@@ -43,4 +65,8 @@ export interface UpdateWorkflowVersionRequest {
43
65
  description?: string | undefined;
44
66
  storageType?: StorageType | undefined;
45
67
  storageCapacity?: number | undefined;
68
+ readmeMarkdown?: string | undefined;
46
69
  }
70
+ export declare const UploadReadSetPartRequestFilterSensitiveLog: (
71
+ obj: UploadReadSetPartRequest
72
+ ) => any;
package/package.json CHANGED
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "name": "@aws-sdk/client-omics",
3
3
  "description": "AWS SDK for JavaScript Omics Client for Node.js, Browser and React Native",
4
- "version": "3.848.0",
4
+ "version": "3.855.0",
5
5
  "scripts": {
6
6
  "build": "concurrently 'yarn:build:cjs' 'yarn:build:es' 'yarn:build:types'",
7
7
  "build:cjs": "node ../../scripts/compilation/inline client-omics",
@@ -20,17 +20,17 @@
20
20
  "dependencies": {
21
21
  "@aws-crypto/sha256-browser": "5.2.0",
22
22
  "@aws-crypto/sha256-js": "5.2.0",
23
- "@aws-sdk/core": "3.846.0",
24
- "@aws-sdk/credential-provider-node": "3.848.0",
23
+ "@aws-sdk/core": "3.855.0",
24
+ "@aws-sdk/credential-provider-node": "3.855.0",
25
25
  "@aws-sdk/middleware-host-header": "3.840.0",
26
26
  "@aws-sdk/middleware-logger": "3.840.0",
27
27
  "@aws-sdk/middleware-recursion-detection": "3.840.0",
28
- "@aws-sdk/middleware-user-agent": "3.848.0",
28
+ "@aws-sdk/middleware-user-agent": "3.855.0",
29
29
  "@aws-sdk/region-config-resolver": "3.840.0",
30
30
  "@aws-sdk/types": "3.840.0",
31
31
  "@aws-sdk/util-endpoints": "3.848.0",
32
32
  "@aws-sdk/util-user-agent-browser": "3.840.0",
33
- "@aws-sdk/util-user-agent-node": "3.848.0",
33
+ "@aws-sdk/util-user-agent-node": "3.855.0",
34
34
  "@smithy/config-resolver": "^4.1.4",
35
35
  "@smithy/core": "^3.7.0",
36
36
  "@smithy/fetch-http-handler": "^5.1.0",