@aws-sdk/client-omics 3.697.0 → 3.709.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +32 -0
- package/dist-cjs/index.js +261 -5
- package/dist-es/Omics.js +8 -0
- package/dist-es/commands/DeleteS3AccessPolicyCommand.js +22 -0
- package/dist-es/commands/GetS3AccessPolicyCommand.js +22 -0
- package/dist-es/commands/PutS3AccessPolicyCommand.js +22 -0
- package/dist-es/commands/UpdateSequenceStoreCommand.js +22 -0
- package/dist-es/commands/index.js +4 -0
- package/dist-es/models/models_0.js +11 -0
- package/dist-es/protocols/Aws_restJson1.js +171 -2
- package/dist-types/Omics.d.ts +28 -0
- package/dist-types/OmicsClient.d.ts +6 -2
- package/dist-types/commands/CreateSequenceStoreCommand.d.ts +16 -0
- package/dist-types/commands/DeleteS3AccessPolicyCommand.d.ts +92 -0
- package/dist-types/commands/GetS3AccessPolicyCommand.d.ts +101 -0
- package/dist-types/commands/GetSequenceStoreCommand.d.ts +7 -0
- package/dist-types/commands/ListSequenceStoresCommand.d.ts +6 -0
- package/dist-types/commands/PutS3AccessPolicyCommand.d.ts +97 -0
- package/dist-types/commands/UpdateSequenceStoreCommand.d.ts +123 -0
- package/dist-types/commands/index.d.ts +4 -0
- package/dist-types/models/models_0.d.ts +333 -10
- package/dist-types/protocols/Aws_restJson1.d.ts +36 -0
- package/dist-types/ts3.4/Omics.d.ts +68 -0
- package/dist-types/ts3.4/OmicsClient.d.ts +24 -0
- package/dist-types/ts3.4/commands/DeleteS3AccessPolicyCommand.d.ts +51 -0
- package/dist-types/ts3.4/commands/GetS3AccessPolicyCommand.d.ts +51 -0
- package/dist-types/ts3.4/commands/PutS3AccessPolicyCommand.d.ts +51 -0
- package/dist-types/ts3.4/commands/UpdateSequenceStoreCommand.d.ts +51 -0
- package/dist-types/ts3.4/commands/index.d.ts +4 -0
- package/dist-types/ts3.4/models/models_0.d.ts +89 -5
- package/dist-types/ts3.4/protocols/Aws_restJson1.d.ts +48 -0
- package/package.json +37 -37
package/README.md
CHANGED
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@@ -395,6 +395,14 @@ DeleteRunGroup
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/DeleteRunGroupCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/DeleteRunGroupCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/DeleteRunGroupCommandOutput/)
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</details>
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<details>
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<summary>
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DeleteS3AccessPolicy
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</summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/DeleteS3AccessPolicyCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/DeleteS3AccessPolicyCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/DeleteS3AccessPolicyCommandOutput/)
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</details>
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<details>
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<summary>
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@@ -555,6 +563,14 @@ GetRunTask
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/GetRunTaskCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/GetRunTaskCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/GetRunTaskCommandOutput/)
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</details>
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<details>
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<summary>
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GetS3AccessPolicy
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</summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/GetS3AccessPolicyCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/GetS3AccessPolicyCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/GetS3AccessPolicyCommandOutput/)
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</details>
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<details>
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<summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/ListWorkflowsCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/ListWorkflowsCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/ListWorkflowsCommandOutput/)
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</details>
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<details>
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<summary>
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PutS3AccessPolicy
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</summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/PutS3AccessPolicyCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/PutS3AccessPolicyCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/PutS3AccessPolicyCommandOutput/)
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</details>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/UpdateRunGroupCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/UpdateRunGroupCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/UpdateRunGroupCommandOutput/)
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</details>
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<details>
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<summary>
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UpdateSequenceStore
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</summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/UpdateSequenceStoreCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/UpdateSequenceStoreCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/UpdateSequenceStoreCommandOutput/)
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</details>
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<details>
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<summary>
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package/dist-cjs/index.js
CHANGED
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@@ -51,6 +51,7 @@ __export(src_exports, {
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DeleteRunCacheCommand: () => DeleteRunCacheCommand,
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DeleteRunCommand: () => DeleteRunCommand,
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DeleteRunGroupCommand: () => DeleteRunGroupCommand,
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DeleteS3AccessPolicyCommand: () => DeleteS3AccessPolicyCommand,
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DeleteSequenceStoreCommand: () => DeleteSequenceStoreCommand,
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DeleteShareCommand: () => DeleteShareCommand,
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DeleteVariantStoreCommand: () => DeleteVariantStoreCommand,
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GetRunCommand: () => GetRunCommand,
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GetRunGroupCommand: () => GetRunGroupCommand,
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GetRunTaskCommand: () => GetRunTaskCommand,
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GetS3AccessPolicyCommand: () => GetS3AccessPolicyCommand,
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GetSequenceStoreCommand: () => GetSequenceStoreCommand,
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GetShareCommand: () => GetShareCommand,
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GetVariantImportJobCommand: () => GetVariantImportJobCommand,
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Omics: () => Omics,
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OmicsClient: () => OmicsClient,
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OmicsServiceException: () => OmicsServiceException,
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PutS3AccessPolicyCommand: () => PutS3AccessPolicyCommand,
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RangeNotSatisfiableException: () => RangeNotSatisfiableException,
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ReadSetActivationJobItemStatus: () => ReadSetActivationJobItemStatus,
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ReadSetActivationJobStatus: () => ReadSetActivationJobStatus,
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RunRetentionMode: () => RunRetentionMode,
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RunStatus: () => RunStatus,
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SchemaValueType: () => SchemaValueType,
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SequenceStoreStatus: () => SequenceStoreStatus,
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ServiceQuotaExceededException: () => ServiceQuotaExceededException,
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ShareResourceType: () => ShareResourceType,
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ShareStatus: () => ShareStatus,
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StoreFormat: () => StoreFormat,
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StoreOptions: () => StoreOptions,
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StoreStatus: () => StoreStatus,
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StoreType: () => StoreType,
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TagResourceCommand: () => TagResourceCommand,
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TaskStatus: () => TaskStatus,
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ThrottlingException: () => ThrottlingException,
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UpdateAnnotationStoreVersionCommand: () => UpdateAnnotationStoreVersionCommand,
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UpdateRunCacheCommand: () => UpdateRunCacheCommand,
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UpdateRunGroupCommand: () => UpdateRunGroupCommand,
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UpdateSequenceStoreCommand: () => UpdateSequenceStoreCommand,
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UpdateVariantStoreCommand: () => UpdateVariantStoreCommand,
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UpdateWorkflowCommand: () => UpdateWorkflowCommand,
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UploadReadSetPartCommand: () => UploadReadSetPartCommand,
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SHA256UP: "SHA256up",
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SHA512UP: "SHA512up"
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};
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var SequenceStoreStatus = {
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ACTIVE: "ACTIVE",
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CREATING: "CREATING",
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DELETING: "DELETING",
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FAILED: "FAILED",
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UPDATING: "UPDATING"
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};
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var WorkflowEngine = {
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var StoreType = {
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REFERENCE_STORE: "REFERENCE_STORE",
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SEQUENCE_STORE: "SEQUENCE_STORE"
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};
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clientToken: [true, (_) => _ ?? (0, import_uuid.v4)()],
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description: [],
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name: [],
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propagatedSetLevelTags: (_) => (0, import_smithy_client._json)(_),
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s3AccessConfig: (_) => (0, import_smithy_client._json)(_),
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b.m("DELETE").h(headers).b(body);
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return b.build();
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}, "se_DeleteRunGroupCommand");
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var se_DeleteS3AccessPolicyCommand = /* @__PURE__ */ __name(async (input, context) => {
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const b = (0, import_core.requestBuilder)(input, context);
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const headers = {};
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b.bp("/s3accesspolicy/{s3AccessPointArn}");
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b.p("s3AccessPointArn", () => input.s3AccessPointArn, "{s3AccessPointArn}", false);
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b.hn(resolvedHostname);
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return b.build();
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}, "se_DeleteS3AccessPolicyCommand");
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}, "se_GetRunTaskCommand");
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var se_GetS3AccessPolicyCommand = /* @__PURE__ */ __name(async (input, context) => {
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const b = (0, import_core.requestBuilder)(input, context);
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const headers = {};
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b.bp("/s3accesspolicy/{s3AccessPointArn}");
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b.p("s3AccessPointArn", () => input.s3AccessPointArn, "{s3AccessPointArn}", false);
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let { hostname: resolvedHostname } = await context.endpoint();
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if (!(0, import_protocol_http.isValidHostname)(resolvedHostname)) {
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}
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}
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b.hn(resolvedHostname);
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b.m("GET").h(headers).b(body);
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return b.build();
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}, "se_GetS3AccessPolicyCommand");
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b.m("GET").h(headers).q(query).b(body);
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var se_PutS3AccessPolicyCommand = /* @__PURE__ */ __name(async (input, context) => {
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const b = (0, import_core.requestBuilder)(input, context);
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"content-type": "application/json"
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};
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b.bp("/s3accesspolicy/{s3AccessPointArn}");
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b.p("s3AccessPointArn", () => input.s3AccessPointArn, "{s3AccessPointArn}", false);
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body = JSON.stringify(
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(0, import_smithy_client.take)(input, {
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s3AccessPolicy: (_) => import_smithy_client.LazyJsonString.from(_)
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})
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);
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let { hostname: resolvedHostname } = await context.endpoint();
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if (!(0, import_protocol_http.isValidHostname)(resolvedHostname)) {
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}, "se_PutS3AccessPolicyCommand");
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var se_StartAnnotationImportJobCommand = /* @__PURE__ */ __name(async (input, context) => {
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}, "se_UpdateRunGroupCommand");
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var se_UpdateSequenceStoreCommand = /* @__PURE__ */ __name(async (input, context) => {
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};
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b.bp("/sequencestore/{id}");
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b.p("id", () => input.id, "{id}", false);
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3016
|
+
let body;
|
|
3017
|
+
body = JSON.stringify(
|
|
3018
|
+
(0, import_smithy_client.take)(input, {
|
|
3019
|
+
clientToken: [true, (_) => _ ?? (0, import_uuid.v4)()],
|
|
3020
|
+
description: [],
|
|
3021
|
+
fallbackLocation: [],
|
|
3022
|
+
name: [],
|
|
3023
|
+
propagatedSetLevelTags: (_) => (0, import_smithy_client._json)(_),
|
|
3024
|
+
s3AccessConfig: (_) => (0, import_smithy_client._json)(_)
|
|
3025
|
+
})
|
|
3026
|
+
);
|
|
3027
|
+
let { hostname: resolvedHostname } = await context.endpoint();
|
|
3028
|
+
if (context.disableHostPrefix !== true) {
|
|
3029
|
+
resolvedHostname = "control-storage-" + resolvedHostname;
|
|
3030
|
+
if (!(0, import_protocol_http.isValidHostname)(resolvedHostname)) {
|
|
3031
|
+
throw new Error("ValidationError: prefixed hostname must be hostname compatible.");
|
|
3032
|
+
}
|
|
3033
|
+
}
|
|
3034
|
+
b.hn(resolvedHostname);
|
|
3035
|
+
b.m("PATCH").h(headers).b(body);
|
|
3036
|
+
return b.build();
|
|
3037
|
+
}, "se_UpdateSequenceStoreCommand");
|
|
2932
3038
|
var se_UpdateVariantStoreCommand = /* @__PURE__ */ __name(async (input, context) => {
|
|
2933
3039
|
const b = (0, import_core.requestBuilder)(input, context);
|
|
2934
3040
|
const headers = {
|
|
@@ -3221,7 +3327,11 @@ var de_CreateSequenceStoreCommand = /* @__PURE__ */ __name(async (output, contex
|
|
|
3221
3327
|
fallbackLocation: import_smithy_client.expectString,
|
|
3222
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|
id: import_smithy_client.expectString,
|
|
3223
3329
|
name: import_smithy_client.expectString,
|
|
3224
|
-
|
|
3330
|
+
propagatedSetLevelTags: import_smithy_client._json,
|
|
3331
|
+
s3Access: import_smithy_client._json,
|
|
3332
|
+
sseConfig: import_smithy_client._json,
|
|
3333
|
+
status: import_smithy_client.expectString,
|
|
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|
+
statusMessage: import_smithy_client.expectString
|
|
3225
3335
|
});
|
|
3226
3336
|
Object.assign(contents, doc);
|
|
3227
3337
|
return contents;
|
|
@@ -3355,6 +3465,16 @@ var de_DeleteRunGroupCommand = /* @__PURE__ */ __name(async (output, context) =>
|
|
|
3355
3465
|
await (0, import_smithy_client.collectBody)(output.body, context);
|
|
3356
3466
|
return contents;
|
|
3357
3467
|
}, "de_DeleteRunGroupCommand");
|
|
3468
|
+
var de_DeleteS3AccessPolicyCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
3469
|
+
if (output.statusCode !== 200 && output.statusCode >= 300) {
|
|
3470
|
+
return de_CommandError(output, context);
|
|
3471
|
+
}
|
|
3472
|
+
const contents = (0, import_smithy_client.map)({
|
|
3473
|
+
$metadata: deserializeMetadata(output)
|
|
3474
|
+
});
|
|
3475
|
+
await (0, import_smithy_client.collectBody)(output.body, context);
|
|
3476
|
+
return contents;
|
|
3477
|
+
}, "de_DeleteS3AccessPolicyCommand");
|
|
3358
3478
|
var de_DeleteSequenceStoreCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
3359
3479
|
if (output.statusCode !== 200 && output.statusCode >= 300) {
|
|
3360
3480
|
return de_CommandError(output, context);
|
|
@@ -3784,6 +3904,24 @@ var de_GetRunTaskCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
|
3784
3904
|
Object.assign(contents, doc);
|
|
3785
3905
|
return contents;
|
|
3786
3906
|
}, "de_GetRunTaskCommand");
|
|
3907
|
+
var de_GetS3AccessPolicyCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
3908
|
+
if (output.statusCode !== 200 && output.statusCode >= 300) {
|
|
3909
|
+
return de_CommandError(output, context);
|
|
3910
|
+
}
|
|
3911
|
+
const contents = (0, import_smithy_client.map)({
|
|
3912
|
+
$metadata: deserializeMetadata(output)
|
|
3913
|
+
});
|
|
3914
|
+
const data = (0, import_smithy_client.expectNonNull)((0, import_smithy_client.expectObject)(await (0, import_core2.parseJsonBody)(output.body, context)), "body");
|
|
3915
|
+
const doc = (0, import_smithy_client.take)(data, {
|
|
3916
|
+
s3AccessPointArn: import_smithy_client.expectString,
|
|
3917
|
+
s3AccessPolicy: import_smithy_client.LazyJsonString.from,
|
|
3918
|
+
storeId: import_smithy_client.expectString,
|
|
3919
|
+
storeType: import_smithy_client.expectString,
|
|
3920
|
+
updateTime: (_) => (0, import_smithy_client.expectNonNull)((0, import_smithy_client.parseRfc3339DateTimeWithOffset)(_))
|
|
3921
|
+
});
|
|
3922
|
+
Object.assign(contents, doc);
|
|
3923
|
+
return contents;
|
|
3924
|
+
}, "de_GetS3AccessPolicyCommand");
|
|
3787
3925
|
var de_GetSequenceStoreCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
3788
3926
|
if (output.statusCode !== 200 && output.statusCode >= 300) {
|
|
3789
3927
|
return de_CommandError(output, context);
|
|
@@ -3800,8 +3938,12 @@ var de_GetSequenceStoreCommand = /* @__PURE__ */ __name(async (output, context)
|
|
|
3800
3938
|
fallbackLocation: import_smithy_client.expectString,
|
|
3801
3939
|
id: import_smithy_client.expectString,
|
|
3802
3940
|
name: import_smithy_client.expectString,
|
|
3941
|
+
propagatedSetLevelTags: import_smithy_client._json,
|
|
3803
3942
|
s3Access: import_smithy_client._json,
|
|
3804
|
-
sseConfig: import_smithy_client._json
|
|
3943
|
+
sseConfig: import_smithy_client._json,
|
|
3944
|
+
status: import_smithy_client.expectString,
|
|
3945
|
+
statusMessage: import_smithy_client.expectString,
|
|
3946
|
+
updateTime: (_) => (0, import_smithy_client.expectNonNull)((0, import_smithy_client.parseRfc3339DateTimeWithOffset)(_))
|
|
3805
3947
|
});
|
|
3806
3948
|
Object.assign(contents, doc);
|
|
3807
3949
|
return contents;
|
|
@@ -4228,6 +4370,22 @@ var de_ListWorkflowsCommand = /* @__PURE__ */ __name(async (output, context) =>
|
|
|
4228
4370
|
Object.assign(contents, doc);
|
|
4229
4371
|
return contents;
|
|
4230
4372
|
}, "de_ListWorkflowsCommand");
|
|
4373
|
+
var de_PutS3AccessPolicyCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
4374
|
+
if (output.statusCode !== 200 && output.statusCode >= 300) {
|
|
4375
|
+
return de_CommandError(output, context);
|
|
4376
|
+
}
|
|
4377
|
+
const contents = (0, import_smithy_client.map)({
|
|
4378
|
+
$metadata: deserializeMetadata(output)
|
|
4379
|
+
});
|
|
4380
|
+
const data = (0, import_smithy_client.expectNonNull)((0, import_smithy_client.expectObject)(await (0, import_core2.parseJsonBody)(output.body, context)), "body");
|
|
4381
|
+
const doc = (0, import_smithy_client.take)(data, {
|
|
4382
|
+
s3AccessPointArn: import_smithy_client.expectString,
|
|
4383
|
+
storeId: import_smithy_client.expectString,
|
|
4384
|
+
storeType: import_smithy_client.expectString
|
|
4385
|
+
});
|
|
4386
|
+
Object.assign(contents, doc);
|
|
4387
|
+
return contents;
|
|
4388
|
+
}, "de_PutS3AccessPolicyCommand");
|
|
4231
4389
|
var de_StartAnnotationImportJobCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
4232
4390
|
if (output.statusCode !== 200 && output.statusCode >= 300) {
|
|
4233
4391
|
return de_CommandError(output, context);
|
|
@@ -4429,6 +4587,32 @@ var de_UpdateRunGroupCommand = /* @__PURE__ */ __name(async (output, context) =>
|
|
|
4429
4587
|
await (0, import_smithy_client.collectBody)(output.body, context);
|
|
4430
4588
|
return contents;
|
|
4431
4589
|
}, "de_UpdateRunGroupCommand");
|
|
4590
|
+
var de_UpdateSequenceStoreCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
4591
|
+
if (output.statusCode !== 200 && output.statusCode >= 300) {
|
|
4592
|
+
return de_CommandError(output, context);
|
|
4593
|
+
}
|
|
4594
|
+
const contents = (0, import_smithy_client.map)({
|
|
4595
|
+
$metadata: deserializeMetadata(output)
|
|
4596
|
+
});
|
|
4597
|
+
const data = (0, import_smithy_client.expectNonNull)((0, import_smithy_client.expectObject)(await (0, import_core2.parseJsonBody)(output.body, context)), "body");
|
|
4598
|
+
const doc = (0, import_smithy_client.take)(data, {
|
|
4599
|
+
arn: import_smithy_client.expectString,
|
|
4600
|
+
creationTime: (_) => (0, import_smithy_client.expectNonNull)((0, import_smithy_client.parseRfc3339DateTimeWithOffset)(_)),
|
|
4601
|
+
description: import_smithy_client.expectString,
|
|
4602
|
+
eTagAlgorithmFamily: import_smithy_client.expectString,
|
|
4603
|
+
fallbackLocation: import_smithy_client.expectString,
|
|
4604
|
+
id: import_smithy_client.expectString,
|
|
4605
|
+
name: import_smithy_client.expectString,
|
|
4606
|
+
propagatedSetLevelTags: import_smithy_client._json,
|
|
4607
|
+
s3Access: import_smithy_client._json,
|
|
4608
|
+
sseConfig: import_smithy_client._json,
|
|
4609
|
+
status: import_smithy_client.expectString,
|
|
4610
|
+
statusMessage: import_smithy_client.expectString,
|
|
4611
|
+
updateTime: (_) => (0, import_smithy_client.expectNonNull)((0, import_smithy_client.parseRfc3339DateTimeWithOffset)(_))
|
|
4612
|
+
});
|
|
4613
|
+
Object.assign(contents, doc);
|
|
4614
|
+
return contents;
|
|
4615
|
+
}, "de_UpdateSequenceStoreCommand");
|
|
4432
4616
|
var de_UpdateVariantStoreCommand = /* @__PURE__ */ __name(async (output, context) => {
|
|
4433
4617
|
if (output.statusCode !== 200 && output.statusCode >= 300) {
|
|
4434
4618
|
return de_CommandError(output, context);
|
|
@@ -4719,7 +4903,10 @@ var se_SequenceStoreFilter = /* @__PURE__ */ __name((input, context) => {
|
|
|
4719
4903
|
return (0, import_smithy_client.take)(input, {
|
|
4720
4904
|
createdAfter: import_smithy_client.serializeDateTime,
|
|
4721
4905
|
createdBefore: import_smithy_client.serializeDateTime,
|
|
4722
|
-
name: []
|
|
4906
|
+
name: [],
|
|
4907
|
+
status: [],
|
|
4908
|
+
updatedAfter: import_smithy_client.serializeDateTime,
|
|
4909
|
+
updatedBefore: import_smithy_client.serializeDateTime
|
|
4723
4910
|
});
|
|
4724
4911
|
}, "se_SequenceStoreFilter");
|
|
4725
4912
|
var de_ActivateReadSetJobItem = /* @__PURE__ */ __name((output, context) => {
|
|
@@ -5013,7 +5200,10 @@ var de_SequenceStoreDetail = /* @__PURE__ */ __name((output, context) => {
|
|
|
5013
5200
|
fallbackLocation: import_smithy_client.expectString,
|
|
5014
5201
|
id: import_smithy_client.expectString,
|
|
5015
5202
|
name: import_smithy_client.expectString,
|
|
5016
|
-
sseConfig: import_smithy_client._json
|
|
5203
|
+
sseConfig: import_smithy_client._json,
|
|
5204
|
+
status: import_smithy_client.expectString,
|
|
5205
|
+
statusMessage: import_smithy_client.expectString,
|
|
5206
|
+
updateTime: (_) => (0, import_smithy_client.expectNonNull)((0, import_smithy_client.parseRfc3339DateTimeWithOffset)(_))
|
|
5017
5207
|
});
|
|
5018
5208
|
}, "de_SequenceStoreDetail");
|
|
5019
5209
|
var de_SequenceStoreDetailList = /* @__PURE__ */ __name((output, context) => {
|
|
@@ -5477,6 +5667,20 @@ var _DeleteRunGroupCommand = class _DeleteRunGroupCommand extends import_smithy_
|
|
|
5477
5667
|
__name(_DeleteRunGroupCommand, "DeleteRunGroupCommand");
|
|
5478
5668
|
var DeleteRunGroupCommand = _DeleteRunGroupCommand;
|
|
5479
5669
|
|
|
5670
|
+
// src/commands/DeleteS3AccessPolicyCommand.ts
|
|
5671
|
+
|
|
5672
|
+
|
|
5673
|
+
|
|
5674
|
+
var _DeleteS3AccessPolicyCommand = class _DeleteS3AccessPolicyCommand extends import_smithy_client.Command.classBuilder().ep(commonParams).m(function(Command, cs, config, o) {
|
|
5675
|
+
return [
|
|
5676
|
+
(0, import_middleware_serde.getSerdePlugin)(config, this.serialize, this.deserialize),
|
|
5677
|
+
(0, import_middleware_endpoint.getEndpointPlugin)(config, Command.getEndpointParameterInstructions())
|
|
5678
|
+
];
|
|
5679
|
+
}).s("Omics", "DeleteS3AccessPolicy", {}).n("OmicsClient", "DeleteS3AccessPolicyCommand").f(void 0, void 0).ser(se_DeleteS3AccessPolicyCommand).de(de_DeleteS3AccessPolicyCommand).build() {
|
|
5680
|
+
};
|
|
5681
|
+
__name(_DeleteS3AccessPolicyCommand, "DeleteS3AccessPolicyCommand");
|
|
5682
|
+
var DeleteS3AccessPolicyCommand = _DeleteS3AccessPolicyCommand;
|
|
5683
|
+
|
|
5480
5684
|
// src/commands/DeleteSequenceStoreCommand.ts
|
|
5481
5685
|
|
|
5482
5686
|
|
|
@@ -5757,6 +5961,20 @@ var _GetRunTaskCommand = class _GetRunTaskCommand extends import_smithy_client.C
|
|
|
5757
5961
|
__name(_GetRunTaskCommand, "GetRunTaskCommand");
|
|
5758
5962
|
var GetRunTaskCommand = _GetRunTaskCommand;
|
|
5759
5963
|
|
|
5964
|
+
// src/commands/GetS3AccessPolicyCommand.ts
|
|
5965
|
+
|
|
5966
|
+
|
|
5967
|
+
|
|
5968
|
+
var _GetS3AccessPolicyCommand = class _GetS3AccessPolicyCommand extends import_smithy_client.Command.classBuilder().ep(commonParams).m(function(Command, cs, config, o) {
|
|
5969
|
+
return [
|
|
5970
|
+
(0, import_middleware_serde.getSerdePlugin)(config, this.serialize, this.deserialize),
|
|
5971
|
+
(0, import_middleware_endpoint.getEndpointPlugin)(config, Command.getEndpointParameterInstructions())
|
|
5972
|
+
];
|
|
5973
|
+
}).s("Omics", "GetS3AccessPolicy", {}).n("OmicsClient", "GetS3AccessPolicyCommand").f(void 0, void 0).ser(se_GetS3AccessPolicyCommand).de(de_GetS3AccessPolicyCommand).build() {
|
|
5974
|
+
};
|
|
5975
|
+
__name(_GetS3AccessPolicyCommand, "GetS3AccessPolicyCommand");
|
|
5976
|
+
var GetS3AccessPolicyCommand = _GetS3AccessPolicyCommand;
|
|
5977
|
+
|
|
5760
5978
|
// src/commands/GetSequenceStoreCommand.ts
|
|
5761
5979
|
|
|
5762
5980
|
|
|
@@ -6135,6 +6353,20 @@ var _ListWorkflowsCommand = class _ListWorkflowsCommand extends import_smithy_cl
|
|
|
6135
6353
|
__name(_ListWorkflowsCommand, "ListWorkflowsCommand");
|
|
6136
6354
|
var ListWorkflowsCommand = _ListWorkflowsCommand;
|
|
6137
6355
|
|
|
6356
|
+
// src/commands/PutS3AccessPolicyCommand.ts
|
|
6357
|
+
|
|
6358
|
+
|
|
6359
|
+
|
|
6360
|
+
var _PutS3AccessPolicyCommand = class _PutS3AccessPolicyCommand extends import_smithy_client.Command.classBuilder().ep(commonParams).m(function(Command, cs, config, o) {
|
|
6361
|
+
return [
|
|
6362
|
+
(0, import_middleware_serde.getSerdePlugin)(config, this.serialize, this.deserialize),
|
|
6363
|
+
(0, import_middleware_endpoint.getEndpointPlugin)(config, Command.getEndpointParameterInstructions())
|
|
6364
|
+
];
|
|
6365
|
+
}).s("Omics", "PutS3AccessPolicy", {}).n("OmicsClient", "PutS3AccessPolicyCommand").f(void 0, void 0).ser(se_PutS3AccessPolicyCommand).de(de_PutS3AccessPolicyCommand).build() {
|
|
6366
|
+
};
|
|
6367
|
+
__name(_PutS3AccessPolicyCommand, "PutS3AccessPolicyCommand");
|
|
6368
|
+
var PutS3AccessPolicyCommand = _PutS3AccessPolicyCommand;
|
|
6369
|
+
|
|
6138
6370
|
// src/commands/StartAnnotationImportJobCommand.ts
|
|
6139
6371
|
|
|
6140
6372
|
|
|
@@ -6317,6 +6549,20 @@ var _UpdateRunGroupCommand = class _UpdateRunGroupCommand extends import_smithy_
|
|
|
6317
6549
|
__name(_UpdateRunGroupCommand, "UpdateRunGroupCommand");
|
|
6318
6550
|
var UpdateRunGroupCommand = _UpdateRunGroupCommand;
|
|
6319
6551
|
|
|
6552
|
+
// src/commands/UpdateSequenceStoreCommand.ts
|
|
6553
|
+
|
|
6554
|
+
|
|
6555
|
+
|
|
6556
|
+
var _UpdateSequenceStoreCommand = class _UpdateSequenceStoreCommand extends import_smithy_client.Command.classBuilder().ep(commonParams).m(function(Command, cs, config, o) {
|
|
6557
|
+
return [
|
|
6558
|
+
(0, import_middleware_serde.getSerdePlugin)(config, this.serialize, this.deserialize),
|
|
6559
|
+
(0, import_middleware_endpoint.getEndpointPlugin)(config, Command.getEndpointParameterInstructions())
|
|
6560
|
+
];
|
|
6561
|
+
}).s("Omics", "UpdateSequenceStore", {}).n("OmicsClient", "UpdateSequenceStoreCommand").f(void 0, void 0).ser(se_UpdateSequenceStoreCommand).de(de_UpdateSequenceStoreCommand).build() {
|
|
6562
|
+
};
|
|
6563
|
+
__name(_UpdateSequenceStoreCommand, "UpdateSequenceStoreCommand");
|
|
6564
|
+
var UpdateSequenceStoreCommand = _UpdateSequenceStoreCommand;
|
|
6565
|
+
|
|
6320
6566
|
// src/commands/UpdateVariantStoreCommand.ts
|
|
6321
6567
|
|
|
6322
6568
|
|
|
@@ -6385,6 +6631,7 @@ var commands = {
|
|
|
6385
6631
|
DeleteRunCommand,
|
|
6386
6632
|
DeleteRunCacheCommand,
|
|
6387
6633
|
DeleteRunGroupCommand,
|
|
6634
|
+
DeleteS3AccessPolicyCommand,
|
|
6388
6635
|
DeleteSequenceStoreCommand,
|
|
6389
6636
|
DeleteShareCommand,
|
|
6390
6637
|
DeleteVariantStoreCommand,
|
|
@@ -6405,6 +6652,7 @@ var commands = {
|
|
|
6405
6652
|
GetRunCacheCommand,
|
|
6406
6653
|
GetRunGroupCommand,
|
|
6407
6654
|
GetRunTaskCommand,
|
|
6655
|
+
GetS3AccessPolicyCommand,
|
|
6408
6656
|
GetSequenceStoreCommand,
|
|
6409
6657
|
GetShareCommand,
|
|
6410
6658
|
GetVariantImportJobCommand,
|
|
@@ -6432,6 +6680,7 @@ var commands = {
|
|
|
6432
6680
|
ListVariantImportJobsCommand,
|
|
6433
6681
|
ListVariantStoresCommand,
|
|
6434
6682
|
ListWorkflowsCommand,
|
|
6683
|
+
PutS3AccessPolicyCommand,
|
|
6435
6684
|
StartAnnotationImportJobCommand,
|
|
6436
6685
|
StartReadSetActivationJobCommand,
|
|
6437
6686
|
StartReadSetExportJobCommand,
|
|
@@ -6445,6 +6694,7 @@ var commands = {
|
|
|
6445
6694
|
UpdateAnnotationStoreVersionCommand,
|
|
6446
6695
|
UpdateRunCacheCommand,
|
|
6447
6696
|
UpdateRunGroupCommand,
|
|
6697
|
+
UpdateSequenceStoreCommand,
|
|
6448
6698
|
UpdateVariantStoreCommand,
|
|
6449
6699
|
UpdateWorkflowCommand,
|
|
6450
6700
|
UploadReadSetPartCommand
|
|
@@ -7691,6 +7941,7 @@ var waitUntilWorkflowActive = /* @__PURE__ */ __name(async (params, input) => {
|
|
|
7691
7941
|
DeleteRunCacheCommand,
|
|
7692
7942
|
DeleteRunCommand,
|
|
7693
7943
|
DeleteRunGroupCommand,
|
|
7944
|
+
DeleteS3AccessPolicyCommand,
|
|
7694
7945
|
DeleteSequenceStoreCommand,
|
|
7695
7946
|
DeleteShareCommand,
|
|
7696
7947
|
DeleteVariantStoreCommand,
|
|
@@ -7711,6 +7962,7 @@ var waitUntilWorkflowActive = /* @__PURE__ */ __name(async (params, input) => {
|
|
|
7711
7962
|
GetRunCommand,
|
|
7712
7963
|
GetRunGroupCommand,
|
|
7713
7964
|
GetRunTaskCommand,
|
|
7965
|
+
GetS3AccessPolicyCommand,
|
|
7714
7966
|
GetSequenceStoreCommand,
|
|
7715
7967
|
GetShareCommand,
|
|
7716
7968
|
GetVariantImportJobCommand,
|
|
@@ -7738,6 +7990,7 @@ var waitUntilWorkflowActive = /* @__PURE__ */ __name(async (params, input) => {
|
|
|
7738
7990
|
ListVariantImportJobsCommand,
|
|
7739
7991
|
ListVariantStoresCommand,
|
|
7740
7992
|
ListWorkflowsCommand,
|
|
7993
|
+
PutS3AccessPolicyCommand,
|
|
7741
7994
|
StartAnnotationImportJobCommand,
|
|
7742
7995
|
StartReadSetActivationJobCommand,
|
|
7743
7996
|
StartReadSetExportJobCommand,
|
|
@@ -7751,6 +8004,7 @@ var waitUntilWorkflowActive = /* @__PURE__ */ __name(async (params, input) => {
|
|
|
7751
8004
|
UpdateAnnotationStoreVersionCommand,
|
|
7752
8005
|
UpdateRunCacheCommand,
|
|
7753
8006
|
UpdateRunGroupCommand,
|
|
8007
|
+
UpdateSequenceStoreCommand,
|
|
7754
8008
|
UpdateVariantStoreCommand,
|
|
7755
8009
|
UpdateWorkflowCommand,
|
|
7756
8010
|
UploadReadSetPartCommand,
|
|
@@ -7839,6 +8093,7 @@ var waitUntilWorkflowActive = /* @__PURE__ */ __name(async (params, input) => {
|
|
|
7839
8093
|
FileType,
|
|
7840
8094
|
RunCacheStatus,
|
|
7841
8095
|
ETagAlgorithmFamily,
|
|
8096
|
+
SequenceStoreStatus,
|
|
7842
8097
|
WorkflowEngine,
|
|
7843
8098
|
WorkflowStatus,
|
|
7844
8099
|
CreationType,
|
|
@@ -7863,6 +8118,7 @@ var waitUntilWorkflowActive = /* @__PURE__ */ __name(async (params, input) => {
|
|
|
7863
8118
|
StorageType,
|
|
7864
8119
|
WorkflowType,
|
|
7865
8120
|
TaskStatus,
|
|
8121
|
+
StoreType,
|
|
7866
8122
|
WorkflowExport,
|
|
7867
8123
|
ResourceOwner,
|
|
7868
8124
|
GetReadSetResponseFilterSensitiveLog,
|
package/dist-es/Omics.js
CHANGED
|
@@ -23,6 +23,7 @@ import { DeleteReferenceStoreCommand, } from "./commands/DeleteReferenceStoreCom
|
|
|
23
23
|
import { DeleteRunCacheCommand, } from "./commands/DeleteRunCacheCommand";
|
|
24
24
|
import { DeleteRunCommand } from "./commands/DeleteRunCommand";
|
|
25
25
|
import { DeleteRunGroupCommand, } from "./commands/DeleteRunGroupCommand";
|
|
26
|
+
import { DeleteS3AccessPolicyCommand, } from "./commands/DeleteS3AccessPolicyCommand";
|
|
26
27
|
import { DeleteSequenceStoreCommand, } from "./commands/DeleteSequenceStoreCommand";
|
|
27
28
|
import { DeleteShareCommand } from "./commands/DeleteShareCommand";
|
|
28
29
|
import { DeleteVariantStoreCommand, } from "./commands/DeleteVariantStoreCommand";
|
|
@@ -43,6 +44,7 @@ import { GetRunCacheCommand } from "./commands/GetRunCacheCommand";
|
|
|
43
44
|
import { GetRunCommand } from "./commands/GetRunCommand";
|
|
44
45
|
import { GetRunGroupCommand } from "./commands/GetRunGroupCommand";
|
|
45
46
|
import { GetRunTaskCommand } from "./commands/GetRunTaskCommand";
|
|
47
|
+
import { GetS3AccessPolicyCommand, } from "./commands/GetS3AccessPolicyCommand";
|
|
46
48
|
import { GetSequenceStoreCommand, } from "./commands/GetSequenceStoreCommand";
|
|
47
49
|
import { GetShareCommand } from "./commands/GetShareCommand";
|
|
48
50
|
import { GetVariantImportJobCommand, } from "./commands/GetVariantImportJobCommand";
|
|
@@ -70,6 +72,7 @@ import { ListTagsForResourceCommand, } from "./commands/ListTagsForResourceComma
|
|
|
70
72
|
import { ListVariantImportJobsCommand, } from "./commands/ListVariantImportJobsCommand";
|
|
71
73
|
import { ListVariantStoresCommand, } from "./commands/ListVariantStoresCommand";
|
|
72
74
|
import { ListWorkflowsCommand, } from "./commands/ListWorkflowsCommand";
|
|
75
|
+
import { PutS3AccessPolicyCommand, } from "./commands/PutS3AccessPolicyCommand";
|
|
73
76
|
import { StartAnnotationImportJobCommand, } from "./commands/StartAnnotationImportJobCommand";
|
|
74
77
|
import { StartReadSetActivationJobCommand, } from "./commands/StartReadSetActivationJobCommand";
|
|
75
78
|
import { StartReadSetExportJobCommand, } from "./commands/StartReadSetExportJobCommand";
|
|
@@ -83,6 +86,7 @@ import { UpdateAnnotationStoreCommand, } from "./commands/UpdateAnnotationStoreC
|
|
|
83
86
|
import { UpdateAnnotationStoreVersionCommand, } from "./commands/UpdateAnnotationStoreVersionCommand";
|
|
84
87
|
import { UpdateRunCacheCommand, } from "./commands/UpdateRunCacheCommand";
|
|
85
88
|
import { UpdateRunGroupCommand, } from "./commands/UpdateRunGroupCommand";
|
|
89
|
+
import { UpdateSequenceStoreCommand, } from "./commands/UpdateSequenceStoreCommand";
|
|
86
90
|
import { UpdateVariantStoreCommand, } from "./commands/UpdateVariantStoreCommand";
|
|
87
91
|
import { UpdateWorkflowCommand, } from "./commands/UpdateWorkflowCommand";
|
|
88
92
|
import { UploadReadSetPartCommand, } from "./commands/UploadReadSetPartCommand";
|
|
@@ -112,6 +116,7 @@ const commands = {
|
|
|
112
116
|
DeleteRunCommand,
|
|
113
117
|
DeleteRunCacheCommand,
|
|
114
118
|
DeleteRunGroupCommand,
|
|
119
|
+
DeleteS3AccessPolicyCommand,
|
|
115
120
|
DeleteSequenceStoreCommand,
|
|
116
121
|
DeleteShareCommand,
|
|
117
122
|
DeleteVariantStoreCommand,
|
|
@@ -132,6 +137,7 @@ const commands = {
|
|
|
132
137
|
GetRunCacheCommand,
|
|
133
138
|
GetRunGroupCommand,
|
|
134
139
|
GetRunTaskCommand,
|
|
140
|
+
GetS3AccessPolicyCommand,
|
|
135
141
|
GetSequenceStoreCommand,
|
|
136
142
|
GetShareCommand,
|
|
137
143
|
GetVariantImportJobCommand,
|
|
@@ -159,6 +165,7 @@ const commands = {
|
|
|
159
165
|
ListVariantImportJobsCommand,
|
|
160
166
|
ListVariantStoresCommand,
|
|
161
167
|
ListWorkflowsCommand,
|
|
168
|
+
PutS3AccessPolicyCommand,
|
|
162
169
|
StartAnnotationImportJobCommand,
|
|
163
170
|
StartReadSetActivationJobCommand,
|
|
164
171
|
StartReadSetExportJobCommand,
|
|
@@ -172,6 +179,7 @@ const commands = {
|
|
|
172
179
|
UpdateAnnotationStoreVersionCommand,
|
|
173
180
|
UpdateRunCacheCommand,
|
|
174
181
|
UpdateRunGroupCommand,
|
|
182
|
+
UpdateSequenceStoreCommand,
|
|
175
183
|
UpdateVariantStoreCommand,
|
|
176
184
|
UpdateWorkflowCommand,
|
|
177
185
|
UploadReadSetPartCommand,
|
|
@@ -0,0 +1,22 @@
|
|
|
1
|
+
import { getEndpointPlugin } from "@smithy/middleware-endpoint";
|
|
2
|
+
import { getSerdePlugin } from "@smithy/middleware-serde";
|
|
3
|
+
import { Command as $Command } from "@smithy/smithy-client";
|
|
4
|
+
import { commonParams } from "../endpoint/EndpointParameters";
|
|
5
|
+
import { de_DeleteS3AccessPolicyCommand, se_DeleteS3AccessPolicyCommand } from "../protocols/Aws_restJson1";
|
|
6
|
+
export { $Command };
|
|
7
|
+
export class DeleteS3AccessPolicyCommand extends $Command
|
|
8
|
+
.classBuilder()
|
|
9
|
+
.ep(commonParams)
|
|
10
|
+
.m(function (Command, cs, config, o) {
|
|
11
|
+
return [
|
|
12
|
+
getSerdePlugin(config, this.serialize, this.deserialize),
|
|
13
|
+
getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
|
|
14
|
+
];
|
|
15
|
+
})
|
|
16
|
+
.s("Omics", "DeleteS3AccessPolicy", {})
|
|
17
|
+
.n("OmicsClient", "DeleteS3AccessPolicyCommand")
|
|
18
|
+
.f(void 0, void 0)
|
|
19
|
+
.ser(se_DeleteS3AccessPolicyCommand)
|
|
20
|
+
.de(de_DeleteS3AccessPolicyCommand)
|
|
21
|
+
.build() {
|
|
22
|
+
}
|
|
@@ -0,0 +1,22 @@
|
|
|
1
|
+
import { getEndpointPlugin } from "@smithy/middleware-endpoint";
|
|
2
|
+
import { getSerdePlugin } from "@smithy/middleware-serde";
|
|
3
|
+
import { Command as $Command } from "@smithy/smithy-client";
|
|
4
|
+
import { commonParams } from "../endpoint/EndpointParameters";
|
|
5
|
+
import { de_GetS3AccessPolicyCommand, se_GetS3AccessPolicyCommand } from "../protocols/Aws_restJson1";
|
|
6
|
+
export { $Command };
|
|
7
|
+
export class GetS3AccessPolicyCommand extends $Command
|
|
8
|
+
.classBuilder()
|
|
9
|
+
.ep(commonParams)
|
|
10
|
+
.m(function (Command, cs, config, o) {
|
|
11
|
+
return [
|
|
12
|
+
getSerdePlugin(config, this.serialize, this.deserialize),
|
|
13
|
+
getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
|
|
14
|
+
];
|
|
15
|
+
})
|
|
16
|
+
.s("Omics", "GetS3AccessPolicy", {})
|
|
17
|
+
.n("OmicsClient", "GetS3AccessPolicyCommand")
|
|
18
|
+
.f(void 0, void 0)
|
|
19
|
+
.ser(se_GetS3AccessPolicyCommand)
|
|
20
|
+
.de(de_GetS3AccessPolicyCommand)
|
|
21
|
+
.build() {
|
|
22
|
+
}
|