@aws-sdk/client-omics 3.696.0 → 3.699.0

package/dist-es/Omics.js

@@ -10,6 +10,7 @@ import { CreateAnnotationStoreCommand, } from "./commands/CreateAnnotationStoreC
 import { CreateAnnotationStoreVersionCommand, } from "./commands/CreateAnnotationStoreVersionCommand";
 import { CreateMultipartReadSetUploadCommand, } from "./commands/CreateMultipartReadSetUploadCommand";
 import { CreateReferenceStoreCommand, } from "./commands/CreateReferenceStoreCommand";
+import { CreateRunCacheCommand, } from "./commands/CreateRunCacheCommand";
 import { CreateRunGroupCommand, } from "./commands/CreateRunGroupCommand";
 import { CreateSequenceStoreCommand, } from "./commands/CreateSequenceStoreCommand";
 import { CreateShareCommand } from "./commands/CreateShareCommand";
@@ -19,8 +20,10 @@ import { DeleteAnnotationStoreCommand, } from "./commands/DeleteAnnotationStoreC
 import { DeleteAnnotationStoreVersionsCommand, } from "./commands/DeleteAnnotationStoreVersionsCommand";
 import { DeleteReferenceCommand, } from "./commands/DeleteReferenceCommand";
 import { DeleteReferenceStoreCommand, } from "./commands/DeleteReferenceStoreCommand";
+import { DeleteRunCacheCommand, } from "./commands/DeleteRunCacheCommand";
 import { DeleteRunCommand } from "./commands/DeleteRunCommand";
 import { DeleteRunGroupCommand, } from "./commands/DeleteRunGroupCommand";
+import { DeleteS3AccessPolicyCommand, } from "./commands/DeleteS3AccessPolicyCommand";
 import { DeleteSequenceStoreCommand, } from "./commands/DeleteSequenceStoreCommand";
 import { DeleteShareCommand } from "./commands/DeleteShareCommand";
 import { DeleteVariantStoreCommand, } from "./commands/DeleteVariantStoreCommand";
@@ -37,9 +40,11 @@ import { GetReferenceCommand, } from "./commands/GetReferenceCommand";
 import { GetReferenceImportJobCommand, } from "./commands/GetReferenceImportJobCommand";
 import { GetReferenceMetadataCommand, } from "./commands/GetReferenceMetadataCommand";
 import { GetReferenceStoreCommand, } from "./commands/GetReferenceStoreCommand";
+import { GetRunCacheCommand } from "./commands/GetRunCacheCommand";
 import { GetRunCommand } from "./commands/GetRunCommand";
 import { GetRunGroupCommand } from "./commands/GetRunGroupCommand";
 import { GetRunTaskCommand } from "./commands/GetRunTaskCommand";
+import { GetS3AccessPolicyCommand, } from "./commands/GetS3AccessPolicyCommand";
 import { GetSequenceStoreCommand, } from "./commands/GetSequenceStoreCommand";
 import { GetShareCommand } from "./commands/GetShareCommand";
 import { GetVariantImportJobCommand, } from "./commands/GetVariantImportJobCommand";
@@ -57,6 +62,7 @@ import { ListReadSetUploadPartsCommand, } from "./commands/ListReadSetUploadPart
 import { ListReferenceImportJobsCommand, } from "./commands/ListReferenceImportJobsCommand";
 import { ListReferencesCommand, } from "./commands/ListReferencesCommand";
 import { ListReferenceStoresCommand, } from "./commands/ListReferenceStoresCommand";
+import { ListRunCachesCommand, } from "./commands/ListRunCachesCommand";
 import { ListRunGroupsCommand, } from "./commands/ListRunGroupsCommand";
 import { ListRunsCommand } from "./commands/ListRunsCommand";
 import { ListRunTasksCommand, } from "./commands/ListRunTasksCommand";
@@ -66,6 +72,7 @@ import { ListTagsForResourceCommand, } from "./commands/ListTagsForResourceComma
 import { ListVariantImportJobsCommand, } from "./commands/ListVariantImportJobsCommand";
 import { ListVariantStoresCommand, } from "./commands/ListVariantStoresCommand";
 import { ListWorkflowsCommand, } from "./commands/ListWorkflowsCommand";
+import { PutS3AccessPolicyCommand, } from "./commands/PutS3AccessPolicyCommand";
 import { StartAnnotationImportJobCommand, } from "./commands/StartAnnotationImportJobCommand";
 import { StartReadSetActivationJobCommand, } from "./commands/StartReadSetActivationJobCommand";
 import { StartReadSetExportJobCommand, } from "./commands/StartReadSetExportJobCommand";
@@ -77,7 +84,9 @@ import { TagResourceCommand } from "./commands/TagResourceCommand";
 import { UntagResourceCommand, } from "./commands/UntagResourceCommand";
 import { UpdateAnnotationStoreCommand, } from "./commands/UpdateAnnotationStoreCommand";
 import { UpdateAnnotationStoreVersionCommand, } from "./commands/UpdateAnnotationStoreVersionCommand";
+import { UpdateRunCacheCommand, } from "./commands/UpdateRunCacheCommand";
 import { UpdateRunGroupCommand, } from "./commands/UpdateRunGroupCommand";
+import { UpdateSequenceStoreCommand, } from "./commands/UpdateSequenceStoreCommand";
 import { UpdateVariantStoreCommand, } from "./commands/UpdateVariantStoreCommand";
 import { UpdateWorkflowCommand, } from "./commands/UpdateWorkflowCommand";
 import { UploadReadSetPartCommand, } from "./commands/UploadReadSetPartCommand";
@@ -94,6 +103,7 @@ const commands = {
     CreateAnnotationStoreVersionCommand,
     CreateMultipartReadSetUploadCommand,
     CreateReferenceStoreCommand,
+    CreateRunCacheCommand,
     CreateRunGroupCommand,
     CreateSequenceStoreCommand,
     CreateShareCommand,
@@ -104,7 +114,9 @@ const commands = {
     DeleteReferenceCommand,
     DeleteReferenceStoreCommand,
     DeleteRunCommand,
+    DeleteRunCacheCommand,
     DeleteRunGroupCommand,
+    DeleteS3AccessPolicyCommand,
     DeleteSequenceStoreCommand,
     DeleteShareCommand,
     DeleteVariantStoreCommand,
@@ -122,8 +134,10 @@ const commands = {
     GetReferenceMetadataCommand,
     GetReferenceStoreCommand,
     GetRunCommand,
+    GetRunCacheCommand,
     GetRunGroupCommand,
     GetRunTaskCommand,
+    GetS3AccessPolicyCommand,
     GetSequenceStoreCommand,
     GetShareCommand,
     GetVariantImportJobCommand,
@@ -141,6 +155,7 @@ const commands = {
     ListReferenceImportJobsCommand,
     ListReferencesCommand,
     ListReferenceStoresCommand,
+    ListRunCachesCommand,
     ListRunGroupsCommand,
     ListRunsCommand,
     ListRunTasksCommand,
@@ -150,6 +165,7 @@ const commands = {
     ListVariantImportJobsCommand,
     ListVariantStoresCommand,
     ListWorkflowsCommand,
+    PutS3AccessPolicyCommand,
     StartAnnotationImportJobCommand,
     StartReadSetActivationJobCommand,
     StartReadSetExportJobCommand,
@@ -161,7 +177,9 @@ const commands = {
     UntagResourceCommand,
     UpdateAnnotationStoreCommand,
     UpdateAnnotationStoreVersionCommand,
+    UpdateRunCacheCommand,
     UpdateRunGroupCommand,
+    UpdateSequenceStoreCommand,
     UpdateVariantStoreCommand,
     UpdateWorkflowCommand,
     UploadReadSetPartCommand,

package/dist-es/commands/CreateRunCacheCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_CreateRunCacheCommand, se_CreateRunCacheCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class CreateRunCacheCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "CreateRunCache", {})
+    .n("OmicsClient", "CreateRunCacheCommand")
+    .f(void 0, void 0)
+    .ser(se_CreateRunCacheCommand)
+    .de(de_CreateRunCacheCommand)
+    .build() {
+}

package/dist-es/commands/DeleteRunCacheCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_DeleteRunCacheCommand, se_DeleteRunCacheCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class DeleteRunCacheCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "DeleteRunCache", {})
+    .n("OmicsClient", "DeleteRunCacheCommand")
+    .f(void 0, void 0)
+    .ser(se_DeleteRunCacheCommand)
+    .de(de_DeleteRunCacheCommand)
+    .build() {
+}

package/dist-es/commands/DeleteS3AccessPolicyCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_DeleteS3AccessPolicyCommand, se_DeleteS3AccessPolicyCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class DeleteS3AccessPolicyCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "DeleteS3AccessPolicy", {})
+    .n("OmicsClient", "DeleteS3AccessPolicyCommand")
+    .f(void 0, void 0)
+    .ser(se_DeleteS3AccessPolicyCommand)
+    .de(de_DeleteS3AccessPolicyCommand)
+    .build() {
+}

package/dist-es/commands/GetRunCacheCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_GetRunCacheCommand, se_GetRunCacheCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class GetRunCacheCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "GetRunCache", {})
+    .n("OmicsClient", "GetRunCacheCommand")
+    .f(void 0, void 0)
+    .ser(se_GetRunCacheCommand)
+    .de(de_GetRunCacheCommand)
+    .build() {
+}

package/dist-es/commands/GetS3AccessPolicyCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_GetS3AccessPolicyCommand, se_GetS3AccessPolicyCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class GetS3AccessPolicyCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "GetS3AccessPolicy", {})
+    .n("OmicsClient", "GetS3AccessPolicyCommand")
+    .f(void 0, void 0)
+    .ser(se_GetS3AccessPolicyCommand)
+    .de(de_GetS3AccessPolicyCommand)
+    .build() {
+}

package/dist-es/commands/ListRunCachesCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_ListRunCachesCommand, se_ListRunCachesCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class ListRunCachesCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "ListRunCaches", {})
+    .n("OmicsClient", "ListRunCachesCommand")
+    .f(void 0, void 0)
+    .ser(se_ListRunCachesCommand)
+    .de(de_ListRunCachesCommand)
+    .build() {
+}

package/dist-es/commands/PutS3AccessPolicyCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_PutS3AccessPolicyCommand, se_PutS3AccessPolicyCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class PutS3AccessPolicyCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "PutS3AccessPolicy", {})
+    .n("OmicsClient", "PutS3AccessPolicyCommand")
+    .f(void 0, void 0)
+    .ser(se_PutS3AccessPolicyCommand)
+    .de(de_PutS3AccessPolicyCommand)
+    .build() {
+}

package/dist-es/commands/UpdateRunCacheCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_UpdateRunCacheCommand, se_UpdateRunCacheCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class UpdateRunCacheCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "UpdateRunCache", {})
+    .n("OmicsClient", "UpdateRunCacheCommand")
+    .f(void 0, void 0)
+    .ser(se_UpdateRunCacheCommand)
+    .de(de_UpdateRunCacheCommand)
+    .build() {
+}

package/dist-es/commands/UpdateSequenceStoreCommand.js

@@ -0,0 +1,22 @@
+import { getEndpointPlugin } from "@smithy/middleware-endpoint";
+import { getSerdePlugin } from "@smithy/middleware-serde";
+import { Command as $Command } from "@smithy/smithy-client";
+import { commonParams } from "../endpoint/EndpointParameters";
+import { de_UpdateSequenceStoreCommand, se_UpdateSequenceStoreCommand } from "../protocols/Aws_restJson1";
+export { $Command };
+export class UpdateSequenceStoreCommand extends $Command
+    .classBuilder()
+    .ep(commonParams)
+    .m(function (Command, cs, config, o) {
+    return [
+        getSerdePlugin(config, this.serialize, this.deserialize),
+        getEndpointPlugin(config, Command.getEndpointParameterInstructions()),
+    ];
+})
+    .s("Omics", "UpdateSequenceStore", {})
+    .n("OmicsClient", "UpdateSequenceStoreCommand")
+    .f(void 0, void 0)
+    .ser(se_UpdateSequenceStoreCommand)
+    .de(de_UpdateSequenceStoreCommand)
+    .build() {
+}

package/dist-es/commands/index.js

@@ -9,6 +9,7 @@ export * from "./CreateAnnotationStoreCommand";
 export * from "./CreateAnnotationStoreVersionCommand";
 export * from "./CreateMultipartReadSetUploadCommand";
 export * from "./CreateReferenceStoreCommand";
+export * from "./CreateRunCacheCommand";
 export * from "./CreateRunGroupCommand";
 export * from "./CreateSequenceStoreCommand";
 export * from "./CreateShareCommand";
@@ -18,8 +19,10 @@ export * from "./DeleteAnnotationStoreCommand";
 export * from "./DeleteAnnotationStoreVersionsCommand";
 export * from "./DeleteReferenceCommand";
 export * from "./DeleteReferenceStoreCommand";
+export * from "./DeleteRunCacheCommand";
 export * from "./DeleteRunCommand";
 export * from "./DeleteRunGroupCommand";
+export * from "./DeleteS3AccessPolicyCommand";
 export * from "./DeleteSequenceStoreCommand";
 export * from "./DeleteShareCommand";
 export * from "./DeleteVariantStoreCommand";
@@ -36,9 +39,11 @@ export * from "./GetReferenceCommand";
 export * from "./GetReferenceImportJobCommand";
 export * from "./GetReferenceMetadataCommand";
 export * from "./GetReferenceStoreCommand";
+export * from "./GetRunCacheCommand";
 export * from "./GetRunCommand";
 export * from "./GetRunGroupCommand";
 export * from "./GetRunTaskCommand";
+export * from "./GetS3AccessPolicyCommand";
 export * from "./GetSequenceStoreCommand";
 export * from "./GetShareCommand";
 export * from "./GetVariantImportJobCommand";
@@ -56,6 +61,7 @@ export * from "./ListReadSetsCommand";
 export * from "./ListReferenceImportJobsCommand";
 export * from "./ListReferenceStoresCommand";
 export * from "./ListReferencesCommand";
+export * from "./ListRunCachesCommand";
 export * from "./ListRunGroupsCommand";
 export * from "./ListRunTasksCommand";
 export * from "./ListRunsCommand";
@@ -65,6 +71,7 @@ export * from "./ListTagsForResourceCommand";
 export * from "./ListVariantImportJobsCommand";
 export * from "./ListVariantStoresCommand";
 export * from "./ListWorkflowsCommand";
+export * from "./PutS3AccessPolicyCommand";
 export * from "./StartAnnotationImportJobCommand";
 export * from "./StartReadSetActivationJobCommand";
 export * from "./StartReadSetExportJobCommand";
@@ -76,7 +83,9 @@ export * from "./TagResourceCommand";
 export * from "./UntagResourceCommand";
 export * from "./UpdateAnnotationStoreCommand";
 export * from "./UpdateAnnotationStoreVersionCommand";
+export * from "./UpdateRunCacheCommand";
 export * from "./UpdateRunGroupCommand";
+export * from "./UpdateSequenceStoreCommand";
 export * from "./UpdateVariantStoreCommand";
 export * from "./UpdateWorkflowCommand";
 export * from "./UploadReadSetPartCommand";

package/dist-es/models/models_0.js

@@ -226,6 +226,10 @@ export const VersionStatus = {
     FAILED: "FAILED",
     UPDATING: "UPDATING",
 };
+export const CacheBehavior = {
+    CACHE_ALWAYS: "CACHE_ALWAYS",
+    CACHE_ON_FAILURE: "CACHE_ON_FAILURE",
+};
 export const ReadSetPartSource = {
     SOURCE1: "SOURCE1",
     SOURCE2: "SOURCE2",
@@ -236,11 +240,23 @@ export const FileType = {
     FASTQ: "FASTQ",
     UBAM: "UBAM",
 };
+export const RunCacheStatus = {
+    ACTIVE: "ACTIVE",
+    DELETED: "DELETED",
+    FAILED: "FAILED",
+};
 export const ETagAlgorithmFamily = {
     MD5UP: "MD5up",
     SHA256UP: "SHA256up",
     SHA512UP: "SHA512up",
 };
+export const SequenceStoreStatus = {
+    ACTIVE: "ACTIVE",
+    CREATING: "CREATING",
+    DELETING: "DELETING",
+    FAILED: "FAILED",
+    UPDATING: "UPDATING",
+};
 export const WorkflowEngine = {
     CWL: "CWL",
     NEXTFLOW: "NEXTFLOW",
@@ -398,6 +414,10 @@ export const TaskStatus = {
     STARTING: "STARTING",
     STOPPING: "STOPPING",
 };
+export const StoreType = {
+    REFERENCE_STORE: "REFERENCE_STORE",
+    SEQUENCE_STORE: "SEQUENCE_STORE",
+};
 export const WorkflowExport = {
     DEFINITION: "DEFINITION",
 };

package/dist-es/pagination/ListRunCachesPaginator.js

@@ -0,0 +1,4 @@
+import { createPaginator } from "@smithy/core";
+import { ListRunCachesCommand, } from "../commands/ListRunCachesCommand";
+import { OmicsClient } from "../OmicsClient";
+export const paginateListRunCaches = createPaginator(OmicsClient, ListRunCachesCommand, "startingToken", "nextToken", "maxResults");

package/dist-es/pagination/index.js

@@ -11,6 +11,7 @@ export * from "./ListReadSetsPaginator";
 export * from "./ListReferenceImportJobsPaginator";
 export * from "./ListReferenceStoresPaginator";
 export * from "./ListReferencesPaginator";
+export * from "./ListRunCachesPaginator";
 export * from "./ListRunGroupsPaginator";
 export * from "./ListRunTasksPaginator";
 export * from "./ListRunsPaginator";