@aws-sdk/client-omics 3.565.0 → 3.567.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist-cjs/index.js +31 -1
- package/dist-es/models/models_0.js +9 -0
- package/dist-es/protocols/Aws_restJson1.js +8 -0
- package/dist-types/commands/AcceptShareCommand.d.ts +1 -3
- package/dist-types/commands/CreateShareCommand.d.ts +14 -3
- package/dist-types/commands/DeleteShareCommand.d.ts +2 -3
- package/dist-types/commands/GetRunCommand.d.ts +3 -0
- package/dist-types/commands/GetShareCommand.d.ts +2 -3
- package/dist-types/commands/GetWorkflowCommand.d.ts +2 -0
- package/dist-types/commands/ListRunsCommand.d.ts +1 -0
- package/dist-types/commands/ListSharesCommand.d.ts +6 -3
- package/dist-types/commands/StartRunCommand.d.ts +8 -0
- package/dist-types/models/models_0.d.ts +124 -104
- package/dist-types/ts3.4/models/models_0.d.ts +20 -0
- package/package.json +14 -15
package/dist-cjs/index.js
CHANGED
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@@ -131,6 +131,7 @@ __export(src_exports, {
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RunStatus: () => RunStatus,
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SchemaValueType: () => SchemaValueType,
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ServiceQuotaExceededException: () => ServiceQuotaExceededException,
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ShareResourceType: () => ShareResourceType,
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ShareStatus: () => ShareStatus,
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StartAnnotationImportJobCommand: () => StartAnnotationImportJobCommand,
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StartReadSetActivationJobCommand: () => StartReadSetActivationJobCommand,
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@@ -139,6 +140,7 @@ __export(src_exports, {
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StartReferenceImportJobCommand: () => StartReferenceImportJobCommand,
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StartRunCommand: () => StartRunCommand,
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StartVariantImportJobCommand: () => StartVariantImportJobCommand,
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StorageType: () => StorageType,
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StoreFormat: () => StoreFormat,
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StoreOptions: () => StoreOptions,
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StoreStatus: () => StoreStatus,
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@@ -839,6 +841,20 @@ var ReadSetExportJobStatus = {
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IN_PROGRESS: "IN_PROGRESS",
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SUBMITTED: "SUBMITTED"
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};
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var ShareResourceType = {
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/**
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* The share is on an annotation store
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*/
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ANNOTATION_STORE: "ANNOTATION_STORE",
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/**
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* The share is on a variant store
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*/
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VARIANT_STORE: "VARIANT_STORE",
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/**
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* The share is on a workflow
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*/
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WORKFLOW: "WORKFLOW"
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};
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var ReadSetFile = {
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INDEX: "INDEX",
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SOURCE1: "SOURCE1",
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@@ -933,6 +949,10 @@ var RunStatus = {
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STARTING: "STARTING",
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STOPPING: "STOPPING"
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};
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var StorageType = {
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DYNAMIC: "DYNAMIC",
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STATIC: "STATIC"
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};
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var WorkflowType = {
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PRIVATE: "PRIVATE",
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READY2RUN: "READY2RUN"
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@@ -1904,7 +1924,8 @@ var se_GetWorkflowCommand = /* @__PURE__ */ __name(async (input, context) => {
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b.p("id", () => input.id, "{id}", false);
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const query = (0, import_smithy_client.map)({
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[_t]: [, input[_t]],
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[_e]: [() => input.export !== void 0, () => (input[_e] || []).map((_entry) => _entry)]
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[_e]: [() => input.export !== void 0, () => (input[_e] || []).map((_entry) => _entry)],
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[_wOI]: [, input[_wOI]]
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});
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let body;
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let { hostname: resolvedHostname } = await context.endpoint();
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@@ -2617,8 +2638,10 @@ var se_StartRunCommand = /* @__PURE__ */ __name(async (input, context) => {
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runGroupId: [],
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runId: [],
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storageCapacity: [],
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storageType: [],
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tags: (_) => (0, import_smithy_client._json)(_),
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workflowId: [],
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workflowOwnerId: [],
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workflowType: []
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})
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);
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@@ -3523,9 +3546,11 @@ var de_GetRunCommand = /* @__PURE__ */ __name(async (output, context) => {
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statusMessage: import_smithy_client.expectString,
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stopTime: (_) => (0, import_smithy_client.expectNonNull)((0, import_smithy_client.parseRfc3339DateTimeWithOffset)(_)),
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storageCapacity: import_smithy_client.expectInt32,
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storageType: import_smithy_client.expectString,
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tags: import_smithy_client._json,
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uuid: import_smithy_client.expectString,
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workflowId: import_smithy_client.expectString,
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workflowOwnerId: import_smithy_client.expectString,
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workflowType: import_smithy_client.expectString
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});
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Object.assign(contents, doc);
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@@ -4750,6 +4775,7 @@ var de_RunListItem = /* @__PURE__ */ __name((output, context) => {
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status: import_smithy_client.expectString,
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stopTime: (_) => (0, import_smithy_client.expectNonNull)((0, import_smithy_client.parseRfc3339DateTimeWithOffset)(_)),
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storageCapacity: import_smithy_client.expectInt32,
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storageType: import_smithy_client.expectString,
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workflowId: import_smithy_client.expectString
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});
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}, "de_RunListItem");
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@@ -4780,6 +4806,7 @@ var de_ShareDetails = /* @__PURE__ */ __name((output, context) => {
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ownerId: import_smithy_client.expectString,
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principalSubscriber: import_smithy_client.expectString,
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resourceArn: import_smithy_client.expectString,
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resourceId: import_smithy_client.expectString,
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shareId: import_smithy_client.expectString,
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shareName: import_smithy_client.expectString,
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status: import_smithy_client.expectString,
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@@ -4892,6 +4919,7 @@ var _s = "status";
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var _sT = "startingToken";
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var _t = "type";
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var _tK = "tagKeys";
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var _wOI = "workflowOwnerId";
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// src/commands/AbortMultipartReadSetUploadCommand.ts
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var _AbortMultipartReadSetUploadCommand = class _AbortMultipartReadSetUploadCommand extends import_smithy_client.Command.classBuilder().ep({
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@@ -7752,6 +7780,7 @@ var waitUntilWorkflowActive = /* @__PURE__ */ __name(async (params, input) => {
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ETagAlgorithm,
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ReadSetExportJobItemStatus,
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ReadSetExportJobStatus,
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ShareResourceType,
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ReadSetFile,
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RangeNotSatisfiableException,
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ReadSetImportJobItemStatus,
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@@ -7765,6 +7794,7 @@ var waitUntilWorkflowActive = /* @__PURE__ */ __name(async (params, input) => {
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RunLogLevel,
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RunRetentionMode,
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RunStatus,
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StorageType,
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WorkflowType,
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TaskStatus,
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WorkflowExport,
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IN_PROGRESS: "IN_PROGRESS",
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SUBMITTED: "SUBMITTED",
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};
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export const ShareResourceType = {
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ANNOTATION_STORE: "ANNOTATION_STORE",
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VARIANT_STORE: "VARIANT_STORE",
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WORKFLOW: "WORKFLOW",
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};
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export const ReadSetFile = {
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INDEX: "INDEX",
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SOURCE1: "SOURCE1",
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STARTING: "STARTING",
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STOPPING: "STOPPING",
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};
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export const StorageType = {
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DYNAMIC: "DYNAMIC",
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STATIC: "STATIC",
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};
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export const WorkflowType = {
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PRIVATE: "PRIVATE",
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READY2RUN: "READY2RUN",
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const query = map({
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[_t]: [, input[_t]],
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[_e]: [() => input.export !== void 0, () => (input[_e] || []).map((_entry) => _entry)],
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[_wOI]: [, input[_wOI]],
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});
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runGroupId: [],
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runId: [],
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storageCapacity: [],
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storageType: [],
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tags: (_) => _json(_),
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workflowId: [],
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workflowOwnerId: [],
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workflowType: [],
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}));
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statusMessage: __expectString,
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stopTime: (_) => __expectNonNull(__parseRfc3339DateTimeWithOffset(_)),
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storageCapacity: __expectInt32,
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storageType: __expectString,
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tags: _json,
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uuid: __expectString,
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workflowId: __expectString,
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workflowOwnerId: __expectString,
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workflowType: __expectString,
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});
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Object.assign(contents, doc);
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status: __expectString,
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stopTime: (_) => __expectNonNull(__parseRfc3339DateTimeWithOffset(_)),
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storageCapacity: __expectInt32,
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storageType: __expectString,
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workflowId: __expectString,
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});
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};
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ownerId: __expectString,
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principalSubscriber: __expectString,
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resourceArn: __expectString,
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resourceId: __expectString,
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shareId: __expectString,
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shareName: __expectString,
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status: __expectString,
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const _sT = "startingToken";
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const _t = "type";
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const _tK = "tagKeys";
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const _wOI = "workflowOwnerId";
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getEndpointParameterInstructions(): import("@smithy/middleware-endpoint").EndpointParameterInstructions;
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};
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/**
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* <p>
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* Accepts a share for an analytics store.
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* </p>
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* <p>Accept a resource share request.</p>
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* @example
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* Use a bare-bones client and the command you need to make an API call.
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* ```javascript
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getEndpointParameterInstructions(): import("@smithy/middleware-endpoint").EndpointParameterInstructions;
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};
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/**
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* <p>
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* <p>Creates a cross-account shared resource. The resource owner makes an offer to share the resource
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* with the principal subscriber (an AWS user with a different account than the resource owner).</p>
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* <p>The following resources support cross-account sharing:</p>
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* <ul>
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* <li>
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* <p>Healthomics variant stores</p>
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* </li>
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* <li>
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* <p>Healthomics annotation stores</p>
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* </li>
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* <li>
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* <p>Private workflows</p>
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* </li>
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* </ul>
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* @example
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* Use a bare-bones client and the command you need to make an API call.
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* ```javascript
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getEndpointParameterInstructions(): import("@smithy/middleware-endpoint").EndpointParameterInstructions;
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};
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/**
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*
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* <p>Deletes a resource share. If you are the resource owner, the subscriber will no longer have
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* access to the shared resource. If you are the subscriber, this operation deletes your access to the share.</p>
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* @example
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* ```javascript
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/**
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* <p>Gets information about a workflow run.</p>
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* <p>If a workflow is shared with you, you cannot export information about the run.</p>
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* @example
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* ```javascript
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* // storageType: "STRING_VALUE",
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* // workflowOwnerId: "STRING_VALUE",
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* // };
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* ```
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/**
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* Retrieves the metadata for a share.
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* <p>Retrieves the metadata for the specified resource share.</p>
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* @example
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* ```javascript
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* // share: { // ShareDetails
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* // shareId: "STRING_VALUE",
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* // resourceArn: "STRING_VALUE",
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* // resourceId: "STRING_VALUE",
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* // principalSubscriber: "STRING_VALUE",
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* // ownerId: "STRING_VALUE",
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* // status: "STRING_VALUE",
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/**
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* <p>Gets information about a workflow.</p>
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* <p>If a workflow is shared with you, you cannot export the workflow.</p>
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* ```javascript
|
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@@ -39,6 +40,7 @@ declare const GetWorkflowCommand_base: {
|
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* export: [ // WorkflowExportList
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* "STRING_VALUE",
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* ],
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+
* workflowOwnerId: "STRING_VALUE",
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* };
|
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* const command = new GetWorkflowCommand(input);
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* const response = await client.send(command);
|
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@@ -26,9 +26,8 @@ declare const ListSharesCommand_base: {
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getEndpointParameterInstructions(): import("@smithy/middleware-endpoint").EndpointParameterInstructions;
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};
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/**
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*
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* </p>
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* <p>Retrieves the resource shares associated with an account. Use the filter parameter to
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* retrieve a specific subset of the shares.</p>
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* @example
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|
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* ```javascript
|
|
@@ -44,6 +43,9 @@ declare const ListSharesCommand_base: {
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|
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* ],
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* type: [ // TypeList
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* "STRING_VALUE",
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* ],
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* },
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* nextToken: "STRING_VALUE",
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* maxResults: Number("int"),
|
|
@@ -55,6 +57,7 @@ declare const ListSharesCommand_base: {
|
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* // { // ShareDetails
|
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* // shareId: "STRING_VALUE",
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* // resourceArn: "STRING_VALUE",
|
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* // resourceId: "STRING_VALUE",
|
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* // principalSubscriber: "STRING_VALUE",
|
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* // ownerId: "STRING_VALUE",
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|
|
@@ -28,9 +28,15 @@ declare const StartRunCommand_base: {
|
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/**
|
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* <p>Starts a workflow run. To duplicate a run, specify the run's ID and a role ARN. The
|
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* remaining parameters are copied from the previous run.</p>
|
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|
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* <p>StartRun will not support re-run for a workflow that is shared with you.</p>
|
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* <p>The total number of runs in your account is subject to a quota per Region. To avoid
|
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* needing to delete runs manually, you can set the retention mode to <code>REMOVE</code>.
|
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* Runs with this setting are deleted automatically when the run quoata is exceeded.</p>
|
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* <p>By default, the run uses STATIC storage. For STATIC storage, set the <code>storageCapacity</code> field.
|
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* You can set the storage type to DYNAMIC. You do not set <code>storageCapacity</code>,
|
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* because HealthOmics dynamically scales the storage up or down as required.
|
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* For more information about static and dynamic storage, see <a href="https://docs.aws.amazon.com/omics/latest/dev/Using-workflows.html">Running workflows</a>
|
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+
* in the <i>AWS HealthOmics User Guide</i>.</p>
|
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|
* @example
|
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|
* Use a bare-bones client and the command you need to make an API call.
|
|
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42
|
* ```javascript
|
|
@@ -54,6 +60,8 @@ declare const StartRunCommand_base: {
|
|
|
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|
* },
|
|
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|
* requestId: "STRING_VALUE", // required
|
|
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|
* retentionMode: "STRING_VALUE",
|
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|
+
* storageType: "STRING_VALUE",
|
|
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|
+
* workflowOwnerId: "STRING_VALUE",
|
|
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65
|
* };
|
|
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|
* const command = new StartRunCommand(input);
|
|
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|
* const response = await client.send(command);
|
|
@@ -139,9 +139,7 @@ export type Accelerators = (typeof Accelerators)[keyof typeof Accelerators];
|
|
|
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|
*/
|
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|
export interface AcceptShareRequest {
|
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|
/**
|
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|
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* <p>
|
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-
* The ID for a share offer for analytics store data.
|
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* </p>
|
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+
* <p>The ID of the resource share.</p>
|
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|
* @public
|
|
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|
*/
|
|
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|
shareId: string | undefined;
|
|
@@ -185,9 +183,7 @@ export type ShareStatus = (typeof ShareStatus)[keyof typeof ShareStatus];
|
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|
*/
|
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|
export interface AcceptShareResponse {
|
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|
/**
|
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|
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* <p>
|
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|
-
* The status of an analytics store share.
|
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|
-
* </p>
|
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|
+
* <p>The status of the resource share.</p>
|
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|
* @public
|
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|
*/
|
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|
status?: ShareStatus;
|
|
@@ -1761,16 +1757,13 @@ export interface GetAnnotationStoreVersionResponse {
|
|
|
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|
versionSizeBytes: number | undefined;
|
|
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|
}
|
|
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|
/**
|
|
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|
-
* <p>
|
|
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|
-
*
|
|
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|
-
* </p>
|
|
1760
|
+
* <p>Use filters to focus the returned annotation store versions on a specific parameter,
|
|
1761
|
+
* such as the status of the annotation store.</p>
|
|
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|
* @public
|
|
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|
*/
|
|
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|
export interface ListAnnotationStoreVersionsFilter {
|
|
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|
/**
|
|
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|
-
* <p>
|
|
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|
-
* The status of an annotation store version.
|
|
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|
-
* </p>
|
|
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|
+
* <p>The status of an annotation store version.</p>
|
|
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|
* @public
|
|
1775
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|
*/
|
|
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|
status?: VersionStatus;
|
|
@@ -2497,23 +2490,17 @@ export interface CreateSequenceStoreResponse {
|
|
|
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|
*/
|
|
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|
export interface CreateShareRequest {
|
|
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|
/**
|
|
2500
|
-
* <p>
|
|
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|
-
* The resource ARN for the analytics store to be shared.
|
|
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|
-
* </p>
|
|
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|
+
* <p>The ARN of the resource to be shared.</p>
|
|
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|
* @public
|
|
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|
*/
|
|
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|
resourceArn: string | undefined;
|
|
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|
/**
|
|
2507
|
-
* <p>
|
|
2508
|
-
* The principal subscriber is the account being given access to the analytics store data through the share offer.
|
|
2509
|
-
* </p>
|
|
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|
+
* <p>The principal subscriber is the account being offered shared access to the resource. </p>
|
|
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|
* @public
|
|
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|
*/
|
|
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|
principalSubscriber: string | undefined;
|
|
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|
/**
|
|
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|
-
* <p>
|
|
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|
-
* A name given to the share.
|
|
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|
-
* </p>
|
|
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|
+
* <p>A name that the owner defines for the share.</p>
|
|
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2504
|
* @public
|
|
2518
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|
*/
|
|
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|
shareName?: string;
|
|
@@ -2523,23 +2510,17 @@ export interface CreateShareRequest {
|
|
|
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|
*/
|
|
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|
export interface CreateShareResponse {
|
|
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|
/**
|
|
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|
-
* <p>
|
|
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|
-
* An ID generated for the share.
|
|
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|
-
* </p>
|
|
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|
+
* <p>The ID that HealthOmics generates for the share.</p>
|
|
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|
* @public
|
|
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|
*/
|
|
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|
shareId?: string;
|
|
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|
/**
|
|
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|
-
* <p>
|
|
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|
-
* The status of a share.
|
|
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|
-
* </p>
|
|
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|
+
* <p>The status of the share.</p>
|
|
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2519
|
* @public
|
|
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2520
|
*/
|
|
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|
status?: ShareStatus;
|
|
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2522
|
/**
|
|
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|
-
* <p>
|
|
2541
|
-
* A name given to the share.
|
|
2542
|
-
* </p>
|
|
2523
|
+
* <p>The name of the share.</p>
|
|
2543
2524
|
* @public
|
|
2544
2525
|
*/
|
|
2545
2526
|
shareName?: string;
|
|
@@ -2673,7 +2654,7 @@ export interface CreateWorkflowRequest {
|
|
|
2673
2654
|
*/
|
|
2674
2655
|
parameterTemplate?: Record<string, WorkflowParameter>;
|
|
2675
2656
|
/**
|
|
2676
|
-
* <p>
|
|
2657
|
+
* <p>The storage capacity for the workflow in gibibytes.</p>
|
|
2677
2658
|
* @public
|
|
2678
2659
|
*/
|
|
2679
2660
|
storageCapacity?: number;
|
|
@@ -2821,9 +2802,7 @@ export interface DeleteSequenceStoreResponse {
|
|
|
2821
2802
|
*/
|
|
2822
2803
|
export interface DeleteShareRequest {
|
|
2823
2804
|
/**
|
|
2824
|
-
* <p>
|
|
2825
|
-
* The ID for the share request to be deleted.
|
|
2826
|
-
* </p>
|
|
2805
|
+
* <p>The ID for the resource share to be deleted.</p>
|
|
2827
2806
|
* @public
|
|
2828
2807
|
*/
|
|
2829
2808
|
shareId: string | undefined;
|
|
@@ -2833,9 +2812,7 @@ export interface DeleteShareRequest {
|
|
|
2833
2812
|
*/
|
|
2834
2813
|
export interface DeleteShareResponse {
|
|
2835
2814
|
/**
|
|
2836
|
-
* <p>
|
|
2837
|
-
* The status of the share being deleted.
|
|
2838
|
-
* </p>
|
|
2815
|
+
* <p>The status of the share being deleted.</p>
|
|
2839
2816
|
* @public
|
|
2840
2817
|
*/
|
|
2841
2818
|
status?: ShareStatus;
|
|
@@ -3073,26 +3050,48 @@ export interface FileInformation {
|
|
|
3073
3050
|
s3Access?: ReadSetS3Access;
|
|
3074
3051
|
}
|
|
3075
3052
|
/**
|
|
3076
|
-
*
|
|
3077
|
-
*
|
|
3078
|
-
|
|
3053
|
+
* @public
|
|
3054
|
+
* @enum
|
|
3055
|
+
*/
|
|
3056
|
+
export declare const ShareResourceType: {
|
|
3057
|
+
/**
|
|
3058
|
+
* The share is on an annotation store
|
|
3059
|
+
*/
|
|
3060
|
+
readonly ANNOTATION_STORE: "ANNOTATION_STORE";
|
|
3061
|
+
/**
|
|
3062
|
+
* The share is on a variant store
|
|
3063
|
+
*/
|
|
3064
|
+
readonly VARIANT_STORE: "VARIANT_STORE";
|
|
3065
|
+
/**
|
|
3066
|
+
* The share is on a workflow
|
|
3067
|
+
*/
|
|
3068
|
+
readonly WORKFLOW: "WORKFLOW";
|
|
3069
|
+
};
|
|
3070
|
+
/**
|
|
3071
|
+
* @public
|
|
3072
|
+
*/
|
|
3073
|
+
export type ShareResourceType = (typeof ShareResourceType)[keyof typeof ShareResourceType];
|
|
3074
|
+
/**
|
|
3075
|
+
* <p>Use filters to return a subset of resources. You can define filters for specific parameters,
|
|
3076
|
+
* such as the resource status.</p>
|
|
3079
3077
|
* @public
|
|
3080
3078
|
*/
|
|
3081
3079
|
export interface Filter {
|
|
3082
3080
|
/**
|
|
3083
|
-
* <p>
|
|
3084
|
-
* The Amazon Resource Number (Arn) for an analytics store.
|
|
3085
|
-
* </p>
|
|
3081
|
+
* <p>Filter based on the Amazon Resource Number (ARN) of the resource. You can specify up to 10 values.</p>
|
|
3086
3082
|
* @public
|
|
3087
3083
|
*/
|
|
3088
3084
|
resourceArns?: string[];
|
|
3089
3085
|
/**
|
|
3090
|
-
* <p>
|
|
3091
|
-
* The status of an annotation store version.
|
|
3092
|
-
* </p>
|
|
3086
|
+
* <p>Filter based on the resource status. You can specify up to 10 values.</p>
|
|
3093
3087
|
* @public
|
|
3094
3088
|
*/
|
|
3095
3089
|
status?: ShareStatus[];
|
|
3090
|
+
/**
|
|
3091
|
+
* <p>The type of resources to be filtered. You can specify one or more of the resource types.</p>
|
|
3092
|
+
* @public
|
|
3093
|
+
*/
|
|
3094
|
+
type?: ShareResourceType[];
|
|
3096
3095
|
}
|
|
3097
3096
|
/**
|
|
3098
3097
|
* @public
|
|
@@ -4013,6 +4012,18 @@ export declare const RunStatus: {
|
|
|
4013
4012
|
* @public
|
|
4014
4013
|
*/
|
|
4015
4014
|
export type RunStatus = (typeof RunStatus)[keyof typeof RunStatus];
|
|
4015
|
+
/**
|
|
4016
|
+
* @public
|
|
4017
|
+
* @enum
|
|
4018
|
+
*/
|
|
4019
|
+
export declare const StorageType: {
|
|
4020
|
+
readonly DYNAMIC: "DYNAMIC";
|
|
4021
|
+
readonly STATIC: "STATIC";
|
|
4022
|
+
};
|
|
4023
|
+
/**
|
|
4024
|
+
* @public
|
|
4025
|
+
*/
|
|
4026
|
+
export type StorageType = (typeof StorageType)[keyof typeof StorageType];
|
|
4016
4027
|
/**
|
|
4017
4028
|
* @public
|
|
4018
4029
|
* @enum
|
|
@@ -4095,7 +4106,9 @@ export interface GetRunResponse {
|
|
|
4095
4106
|
*/
|
|
4096
4107
|
parameters?: __DocumentType;
|
|
4097
4108
|
/**
|
|
4098
|
-
* <p>The run's storage capacity in
|
|
4109
|
+
* <p>The run's storage capacity in gibibytes. For dynamic storage,
|
|
4110
|
+
* after the run has completed, this value is the maximum amount of storage
|
|
4111
|
+
* used during the run.</p>
|
|
4099
4112
|
* @public
|
|
4100
4113
|
*/
|
|
4101
4114
|
storageCapacity?: number;
|
|
@@ -4174,6 +4187,16 @@ export interface GetRunResponse {
|
|
|
4174
4187
|
* @public
|
|
4175
4188
|
*/
|
|
4176
4189
|
runOutputUri?: string;
|
|
4190
|
+
/**
|
|
4191
|
+
* <p>The run's storage type.</p>
|
|
4192
|
+
* @public
|
|
4193
|
+
*/
|
|
4194
|
+
storageType?: StorageType;
|
|
4195
|
+
/**
|
|
4196
|
+
* <p>The ID of the workflow owner.</p>
|
|
4197
|
+
* @public
|
|
4198
|
+
*/
|
|
4199
|
+
workflowOwnerId?: string;
|
|
4177
4200
|
}
|
|
4178
4201
|
/**
|
|
4179
4202
|
* @public
|
|
@@ -4418,80 +4441,63 @@ export interface GetSequenceStoreResponse {
|
|
|
4418
4441
|
*/
|
|
4419
4442
|
export interface GetShareRequest {
|
|
4420
4443
|
/**
|
|
4421
|
-
* <p>
|
|
4422
|
-
* The generated ID for a share.
|
|
4423
|
-
* </p>
|
|
4444
|
+
* <p>The ID of the share.</p>
|
|
4424
4445
|
* @public
|
|
4425
4446
|
*/
|
|
4426
4447
|
shareId: string | undefined;
|
|
4427
4448
|
}
|
|
4428
4449
|
/**
|
|
4429
|
-
* <p>
|
|
4430
|
-
* The details of a share.
|
|
4431
|
-
* </p>
|
|
4450
|
+
* <p>The details of a resource share.</p>
|
|
4432
4451
|
* @public
|
|
4433
4452
|
*/
|
|
4434
4453
|
export interface ShareDetails {
|
|
4435
4454
|
/**
|
|
4436
|
-
* <p>
|
|
4437
|
-
* The ID for a share offer for an analytics store .
|
|
4438
|
-
* </p>
|
|
4455
|
+
* <p>The ID of the resource share.</p>
|
|
4439
4456
|
* @public
|
|
4440
4457
|
*/
|
|
4441
4458
|
shareId?: string;
|
|
4442
4459
|
/**
|
|
4443
|
-
* <p>
|
|
4444
|
-
* The resource Arn of the analytics store being shared.
|
|
4445
|
-
* </p>
|
|
4460
|
+
* <p>The Arn of the shared resource. </p>
|
|
4446
4461
|
* @public
|
|
4447
4462
|
*/
|
|
4448
4463
|
resourceArn?: string;
|
|
4449
4464
|
/**
|
|
4450
|
-
* <p>
|
|
4451
|
-
*
|
|
4452
|
-
|
|
4465
|
+
* <p>The ID of the shared resource. </p>
|
|
4466
|
+
* @public
|
|
4467
|
+
*/
|
|
4468
|
+
resourceId?: string;
|
|
4469
|
+
/**
|
|
4470
|
+
* <p>The principal subscriber is the account that is sharing the resource.</p>
|
|
4453
4471
|
* @public
|
|
4454
4472
|
*/
|
|
4455
4473
|
principalSubscriber?: string;
|
|
4456
4474
|
/**
|
|
4457
|
-
* <p>
|
|
4458
|
-
* The account ID for the data owner. The owner creates the share offer.
|
|
4459
|
-
* </p>
|
|
4475
|
+
* <p>The account ID for the data owner. The owner creates the resource share.</p>
|
|
4460
4476
|
* @public
|
|
4461
4477
|
*/
|
|
4462
4478
|
ownerId?: string;
|
|
4463
4479
|
/**
|
|
4464
|
-
* <p>
|
|
4465
|
-
* The status of a share.
|
|
4466
|
-
* </p>
|
|
4480
|
+
* <p>The status of the share.</p>
|
|
4467
4481
|
* @public
|
|
4468
4482
|
*/
|
|
4469
4483
|
status?: ShareStatus;
|
|
4470
4484
|
/**
|
|
4471
|
-
* <p>
|
|
4472
|
-
* The status message for a share. It provides more details on the status of the share.
|
|
4473
|
-
* </p>
|
|
4485
|
+
* <p>The status message for a resource share. It provides additional details about the share status.</p>
|
|
4474
4486
|
* @public
|
|
4475
4487
|
*/
|
|
4476
4488
|
statusMessage?: string;
|
|
4477
4489
|
/**
|
|
4478
|
-
* <p>
|
|
4479
|
-
* The name of the share.
|
|
4480
|
-
* </p>
|
|
4490
|
+
* <p>The name of the resource share.</p>
|
|
4481
4491
|
* @public
|
|
4482
4492
|
*/
|
|
4483
4493
|
shareName?: string;
|
|
4484
4494
|
/**
|
|
4485
|
-
* <p>
|
|
4486
|
-
* The timestamp for when the share was created.
|
|
4487
|
-
* </p>
|
|
4495
|
+
* <p>The timestamp of when the resource share was created.</p>
|
|
4488
4496
|
* @public
|
|
4489
4497
|
*/
|
|
4490
4498
|
creationTime?: Date;
|
|
4491
4499
|
/**
|
|
4492
|
-
* <p>
|
|
4493
|
-
* The timestamp of the share update.
|
|
4494
|
-
* </p>
|
|
4500
|
+
* <p>The timestamp of the resource share update.</p>
|
|
4495
4501
|
* @public
|
|
4496
4502
|
*/
|
|
4497
4503
|
updateTime?: Date;
|
|
@@ -4501,9 +4507,7 @@ export interface ShareDetails {
|
|
|
4501
4507
|
*/
|
|
4502
4508
|
export interface GetShareResponse {
|
|
4503
4509
|
/**
|
|
4504
|
-
* <p>
|
|
4505
|
-
* An analytic store share details object. contains status, resourceArn, ownerId, etc.
|
|
4506
|
-
* </p>
|
|
4510
|
+
* <p>A resource share details object. The object includes the status, the resourceArn, and ownerId.</p>
|
|
4507
4511
|
* @public
|
|
4508
4512
|
*/
|
|
4509
4513
|
share?: ShareDetails;
|
|
@@ -4704,6 +4708,11 @@ export interface GetWorkflowRequest {
|
|
|
4704
4708
|
* @public
|
|
4705
4709
|
*/
|
|
4706
4710
|
export?: WorkflowExport[];
|
|
4711
|
+
/**
|
|
4712
|
+
* <p>The ID of the workflow owner.</p>
|
|
4713
|
+
* @public
|
|
4714
|
+
*/
|
|
4715
|
+
workflowOwnerId?: string;
|
|
4707
4716
|
}
|
|
4708
4717
|
/**
|
|
4709
4718
|
* @public
|
|
@@ -4765,7 +4774,7 @@ export interface GetWorkflowResponse {
|
|
|
4765
4774
|
*/
|
|
4766
4775
|
parameterTemplate?: Record<string, WorkflowParameter>;
|
|
4767
4776
|
/**
|
|
4768
|
-
* <p>The workflow's storage capacity in
|
|
4777
|
+
* <p>The workflow's storage capacity in gibibytes.</p>
|
|
4769
4778
|
* @public
|
|
4770
4779
|
*/
|
|
4771
4780
|
storageCapacity?: number;
|
|
@@ -5857,7 +5866,9 @@ export interface RunListItem {
|
|
|
5857
5866
|
*/
|
|
5858
5867
|
priority?: number;
|
|
5859
5868
|
/**
|
|
5860
|
-
* <p>The run's storage capacity
|
|
5869
|
+
* <p>The run's storage capacity in gibibytes. For dynamic storage,
|
|
5870
|
+
* after the run has completed, this value is the maximum amount of storage
|
|
5871
|
+
* used during the run.</p>
|
|
5861
5872
|
* @public
|
|
5862
5873
|
*/
|
|
5863
5874
|
storageCapacity?: number;
|
|
@@ -5876,6 +5887,11 @@ export interface RunListItem {
|
|
|
5876
5887
|
* @public
|
|
5877
5888
|
*/
|
|
5878
5889
|
stopTime?: Date;
|
|
5890
|
+
/**
|
|
5891
|
+
* <p>The run's storage type.</p>
|
|
5892
|
+
* @public
|
|
5893
|
+
*/
|
|
5894
|
+
storageType?: StorageType;
|
|
5879
5895
|
}
|
|
5880
5896
|
/**
|
|
5881
5897
|
* @public
|
|
@@ -6117,30 +6133,23 @@ export type ResourceOwner = (typeof ResourceOwner)[keyof typeof ResourceOwner];
|
|
|
6117
6133
|
*/
|
|
6118
6134
|
export interface ListSharesRequest {
|
|
6119
6135
|
/**
|
|
6120
|
-
* <p>
|
|
6121
|
-
* The account that owns the analytics store shared.
|
|
6122
|
-
* </p>
|
|
6136
|
+
* <p>The account that owns the resource shares.</p>
|
|
6123
6137
|
* @public
|
|
6124
6138
|
*/
|
|
6125
6139
|
resourceOwner: ResourceOwner | undefined;
|
|
6126
6140
|
/**
|
|
6127
|
-
* <p>
|
|
6128
|
-
* Attributes used to filter for a specific subset of shares.
|
|
6129
|
-
* </p>
|
|
6141
|
+
* <p>Attributes that you use to filter for a specific subset of resource shares.</p>
|
|
6130
6142
|
* @public
|
|
6131
6143
|
*/
|
|
6132
6144
|
filter?: Filter;
|
|
6133
6145
|
/**
|
|
6134
|
-
* <p>
|
|
6135
|
-
*
|
|
6136
|
-
* </p>
|
|
6146
|
+
* <p>Next token returned in the response of a previous ListReadSetUploadPartsRequest call.
|
|
6147
|
+
* Used to get the next page of results.</p>
|
|
6137
6148
|
* @public
|
|
6138
6149
|
*/
|
|
6139
6150
|
nextToken?: string;
|
|
6140
6151
|
/**
|
|
6141
|
-
* <p>
|
|
6142
|
-
* The maximum number of shares to return in one page of results.
|
|
6143
|
-
* </p>
|
|
6152
|
+
* <p>The maximum number of shares to return in one page of results.</p>
|
|
6144
6153
|
* @public
|
|
6145
6154
|
*/
|
|
6146
6155
|
maxResults?: number;
|
|
@@ -6150,9 +6159,7 @@ export interface ListSharesRequest {
|
|
|
6150
6159
|
*/
|
|
6151
6160
|
export interface ListSharesResponse {
|
|
6152
6161
|
/**
|
|
6153
|
-
* <p>
|
|
6154
|
-
* The shares available and their meta details.
|
|
6155
|
-
* </p>
|
|
6162
|
+
* <p>The shares available and their metadata details.</p>
|
|
6156
6163
|
* @public
|
|
6157
6164
|
*/
|
|
6158
6165
|
shares: ShareDetails[] | undefined;
|
|
@@ -6410,12 +6417,12 @@ export interface ListVariantStoresResponse {
|
|
|
6410
6417
|
*/
|
|
6411
6418
|
export interface ListWorkflowsRequest {
|
|
6412
6419
|
/**
|
|
6413
|
-
* <p>
|
|
6420
|
+
* <p>Filter the list by workflow type.</p>
|
|
6414
6421
|
* @public
|
|
6415
6422
|
*/
|
|
6416
6423
|
type?: WorkflowType;
|
|
6417
6424
|
/**
|
|
6418
|
-
* <p>
|
|
6425
|
+
* <p>Filter the list by workflow name.</p>
|
|
6419
6426
|
* @public
|
|
6420
6427
|
*/
|
|
6421
6428
|
name?: string;
|
|
@@ -6483,7 +6490,7 @@ export interface WorkflowListItem {
|
|
|
6483
6490
|
*/
|
|
6484
6491
|
export interface ListWorkflowsResponse {
|
|
6485
6492
|
/**
|
|
6486
|
-
* <p>
|
|
6493
|
+
* <p>A list of workflow items.</p>
|
|
6487
6494
|
* @public
|
|
6488
6495
|
*/
|
|
6489
6496
|
items?: WorkflowListItem[];
|
|
@@ -6654,7 +6661,8 @@ export interface StartRunRequest {
|
|
|
6654
6661
|
*/
|
|
6655
6662
|
parameters?: __DocumentType;
|
|
6656
6663
|
/**
|
|
6657
|
-
* <p>A storage capacity for the run in gibibytes
|
|
6664
|
+
* <p>A storage capacity for the run in gibibytes. This field is not required if the storage type is dynamic
|
|
6665
|
+
* (the system ignores any value that you enter).</p>
|
|
6658
6666
|
* @public
|
|
6659
6667
|
*/
|
|
6660
6668
|
storageCapacity?: number;
|
|
@@ -6683,6 +6691,18 @@ export interface StartRunRequest {
|
|
|
6683
6691
|
* @public
|
|
6684
6692
|
*/
|
|
6685
6693
|
retentionMode?: RunRetentionMode;
|
|
6694
|
+
/**
|
|
6695
|
+
* <p>The run's storage type. By default, the run uses STATIC storage type, which allocates a fixed amount of storage.
|
|
6696
|
+
* If you set the storage type to DYNAMIC, HealthOmics dynamically scales the storage up
|
|
6697
|
+
* or down, based on file system utilization.</p>
|
|
6698
|
+
* @public
|
|
6699
|
+
*/
|
|
6700
|
+
storageType?: StorageType;
|
|
6701
|
+
/**
|
|
6702
|
+
* <p>The ID of the workflow owner. </p>
|
|
6703
|
+
* @public
|
|
6704
|
+
*/
|
|
6705
|
+
workflowOwnerId?: string;
|
|
6686
6706
|
}
|
|
6687
6707
|
/**
|
|
6688
6708
|
* @public
|
|
@@ -848,9 +848,17 @@ export interface FileInformation {
|
|
|
848
848
|
contentLength?: number;
|
|
849
849
|
s3Access?: ReadSetS3Access;
|
|
850
850
|
}
|
|
851
|
+
export declare const ShareResourceType: {
|
|
852
|
+
readonly ANNOTATION_STORE: "ANNOTATION_STORE";
|
|
853
|
+
readonly VARIANT_STORE: "VARIANT_STORE";
|
|
854
|
+
readonly WORKFLOW: "WORKFLOW";
|
|
855
|
+
};
|
|
856
|
+
export type ShareResourceType =
|
|
857
|
+
(typeof ShareResourceType)[keyof typeof ShareResourceType];
|
|
851
858
|
export interface Filter {
|
|
852
859
|
resourceArns?: string[];
|
|
853
860
|
status?: ShareStatus[];
|
|
861
|
+
type?: ShareResourceType[];
|
|
854
862
|
}
|
|
855
863
|
export declare const ReadSetFile: {
|
|
856
864
|
readonly INDEX: "INDEX";
|
|
@@ -1125,6 +1133,11 @@ export declare const RunStatus: {
|
|
|
1125
1133
|
readonly STOPPING: "STOPPING";
|
|
1126
1134
|
};
|
|
1127
1135
|
export type RunStatus = (typeof RunStatus)[keyof typeof RunStatus];
|
|
1136
|
+
export declare const StorageType: {
|
|
1137
|
+
readonly DYNAMIC: "DYNAMIC";
|
|
1138
|
+
readonly STATIC: "STATIC";
|
|
1139
|
+
};
|
|
1140
|
+
export type StorageType = (typeof StorageType)[keyof typeof StorageType];
|
|
1128
1141
|
export declare const WorkflowType: {
|
|
1129
1142
|
readonly PRIVATE: "PRIVATE";
|
|
1130
1143
|
readonly READY2RUN: "READY2RUN";
|
|
@@ -1160,6 +1173,8 @@ export interface GetRunResponse {
|
|
|
1160
1173
|
logLocation?: RunLogLocation;
|
|
1161
1174
|
uuid?: string;
|
|
1162
1175
|
runOutputUri?: string;
|
|
1176
|
+
storageType?: StorageType;
|
|
1177
|
+
workflowOwnerId?: string;
|
|
1163
1178
|
}
|
|
1164
1179
|
export interface GetRunGroupRequest {
|
|
1165
1180
|
id: string | undefined;
|
|
@@ -1228,6 +1243,7 @@ export interface GetShareRequest {
|
|
|
1228
1243
|
export interface ShareDetails {
|
|
1229
1244
|
shareId?: string;
|
|
1230
1245
|
resourceArn?: string;
|
|
1246
|
+
resourceId?: string;
|
|
1231
1247
|
principalSubscriber?: string;
|
|
1232
1248
|
ownerId?: string;
|
|
1233
1249
|
status?: ShareStatus;
|
|
@@ -1286,6 +1302,7 @@ export interface GetWorkflowRequest {
|
|
|
1286
1302
|
id: string | undefined;
|
|
1287
1303
|
type?: WorkflowType;
|
|
1288
1304
|
export?: WorkflowExport[];
|
|
1305
|
+
workflowOwnerId?: string;
|
|
1289
1306
|
}
|
|
1290
1307
|
export interface GetWorkflowResponse {
|
|
1291
1308
|
arn?: string;
|
|
@@ -1542,6 +1559,7 @@ export interface RunListItem {
|
|
|
1542
1559
|
creationTime?: Date;
|
|
1543
1560
|
startTime?: Date;
|
|
1544
1561
|
stopTime?: Date;
|
|
1562
|
+
storageType?: StorageType;
|
|
1545
1563
|
}
|
|
1546
1564
|
export interface ListRunsResponse {
|
|
1547
1565
|
items?: RunListItem[];
|
|
@@ -1727,6 +1745,8 @@ export interface StartRunRequest {
|
|
|
1727
1745
|
tags?: Record<string, string>;
|
|
1728
1746
|
requestId?: string;
|
|
1729
1747
|
retentionMode?: RunRetentionMode;
|
|
1748
|
+
storageType?: StorageType;
|
|
1749
|
+
workflowOwnerId?: string;
|
|
1730
1750
|
}
|
|
1731
1751
|
export interface StartRunResponse {
|
|
1732
1752
|
arn?: string;
|
package/package.json
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@aws-sdk/client-omics",
|
|
3
3
|
"description": "AWS SDK for JavaScript Omics Client for Node.js, Browser and React Native",
|
|
4
|
-
"version": "3.
|
|
4
|
+
"version": "3.567.0",
|
|
5
5
|
"scripts": {
|
|
6
6
|
"build": "concurrently 'yarn:build:cjs' 'yarn:build:es' 'yarn:build:types'",
|
|
7
7
|
"build:cjs": "node ../../scripts/compilation/inline client-omics",
|
|
@@ -20,17 +20,17 @@
|
|
|
20
20
|
"dependencies": {
|
|
21
21
|
"@aws-crypto/sha256-browser": "3.0.0",
|
|
22
22
|
"@aws-crypto/sha256-js": "3.0.0",
|
|
23
|
-
"@aws-sdk/core": "3.
|
|
24
|
-
"@aws-sdk/credential-provider-node": "3.
|
|
25
|
-
"@aws-sdk/middleware-host-header": "3.
|
|
26
|
-
"@aws-sdk/middleware-logger": "3.
|
|
27
|
-
"@aws-sdk/middleware-recursion-detection": "3.
|
|
28
|
-
"@aws-sdk/middleware-user-agent": "3.
|
|
29
|
-
"@aws-sdk/region-config-resolver": "3.
|
|
30
|
-
"@aws-sdk/types": "3.
|
|
31
|
-
"@aws-sdk/util-endpoints": "3.
|
|
32
|
-
"@aws-sdk/util-user-agent-browser": "3.
|
|
33
|
-
"@aws-sdk/util-user-agent-node": "3.
|
|
23
|
+
"@aws-sdk/core": "3.567.0",
|
|
24
|
+
"@aws-sdk/credential-provider-node": "3.567.0",
|
|
25
|
+
"@aws-sdk/middleware-host-header": "3.567.0",
|
|
26
|
+
"@aws-sdk/middleware-logger": "3.567.0",
|
|
27
|
+
"@aws-sdk/middleware-recursion-detection": "3.567.0",
|
|
28
|
+
"@aws-sdk/middleware-user-agent": "3.567.0",
|
|
29
|
+
"@aws-sdk/region-config-resolver": "3.567.0",
|
|
30
|
+
"@aws-sdk/types": "3.567.0",
|
|
31
|
+
"@aws-sdk/util-endpoints": "3.567.0",
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32
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+
"@aws-sdk/util-user-agent-browser": "3.567.0",
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33
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+
"@aws-sdk/util-user-agent-node": "3.567.0",
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34
34
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"@smithy/config-resolver": "^2.2.0",
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35
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"@smithy/core": "^1.4.2",
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"@smithy/fetch-http-handler": "^2.5.0",
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@@ -62,8 +62,7 @@
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62
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"uuid": "^9.0.1"
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},
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64
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"devDependencies": {
|
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65
|
-
"@
|
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66
|
-
"@tsconfig/node14": "1.0.3",
|
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65
|
+
"@tsconfig/node16": "16.1.3",
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67
66
|
"@types/node": "^14.14.31",
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|
"@types/uuid": "^9.0.4",
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"concurrently": "7.0.0",
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@@ -72,7 +71,7 @@
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72
71
|
"typescript": "~4.9.5"
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72
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},
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74
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|
"engines": {
|
|
75
|
-
"node": ">=
|
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74
|
+
"node": ">=16.0.0"
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|
},
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77
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|
"typesVersions": {
|
|
78
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|
"<4.0": {
|