@aws-sdk/client-omics 3.300.0 → 3.303.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist-cjs/models/models_0.js +181 -209
- package/dist-es/models/models_0.js +181 -209
- package/dist-types/commands/BatchDeleteReadSetCommand.d.ts +2 -2
- package/dist-types/commands/CancelAnnotationImportJobCommand.d.ts +1 -1
- package/dist-types/commands/CancelRunCommand.d.ts +1 -1
- package/dist-types/commands/CancelVariantImportJobCommand.d.ts +1 -1
- package/dist-types/commands/CreateAnnotationStoreCommand.d.ts +9 -9
- package/dist-types/commands/CreateReferenceStoreCommand.d.ts +3 -3
- package/dist-types/commands/CreateRunGroupCommand.d.ts +2 -2
- package/dist-types/commands/CreateSequenceStoreCommand.d.ts +3 -3
- package/dist-types/commands/CreateVariantStoreCommand.d.ts +4 -4
- package/dist-types/commands/CreateWorkflowCommand.d.ts +4 -4
- package/dist-types/commands/DeleteAnnotationStoreCommand.d.ts +1 -1
- package/dist-types/commands/DeleteReferenceCommand.d.ts +1 -1
- package/dist-types/commands/DeleteReferenceStoreCommand.d.ts +1 -1
- package/dist-types/commands/DeleteRunCommand.d.ts +1 -1
- package/dist-types/commands/DeleteRunGroupCommand.d.ts +1 -1
- package/dist-types/commands/DeleteSequenceStoreCommand.d.ts +1 -1
- package/dist-types/commands/DeleteVariantStoreCommand.d.ts +1 -1
- package/dist-types/commands/DeleteWorkflowCommand.d.ts +1 -1
- package/dist-types/commands/GetAnnotationImportJobCommand.d.ts +1 -1
- package/dist-types/commands/GetAnnotationStoreCommand.d.ts +1 -1
- package/dist-types/commands/GetReadSetActivationJobCommand.d.ts +1 -1
- package/dist-types/commands/GetReadSetCommand.d.ts +1 -1
- package/dist-types/commands/GetReadSetExportJobCommand.d.ts +1 -1
- package/dist-types/commands/GetReadSetImportJobCommand.d.ts +1 -1
- package/dist-types/commands/GetReadSetMetadataCommand.d.ts +1 -1
- package/dist-types/commands/GetReferenceCommand.d.ts +1 -1
- package/dist-types/commands/GetReferenceImportJobCommand.d.ts +1 -1
- package/dist-types/commands/GetReferenceMetadataCommand.d.ts +1 -1
- package/dist-types/commands/GetReferenceStoreCommand.d.ts +1 -1
- package/dist-types/commands/GetRunCommand.d.ts +2 -2
- package/dist-types/commands/GetRunGroupCommand.d.ts +1 -1
- package/dist-types/commands/GetRunTaskCommand.d.ts +1 -1
- package/dist-types/commands/GetSequenceStoreCommand.d.ts +1 -1
- package/dist-types/commands/GetVariantImportJobCommand.d.ts +1 -1
- package/dist-types/commands/GetVariantStoreCommand.d.ts +1 -1
- package/dist-types/commands/GetWorkflowCommand.d.ts +2 -2
- package/dist-types/commands/ListAnnotationImportJobsCommand.d.ts +3 -3
- package/dist-types/commands/ListAnnotationStoresCommand.d.ts +3 -3
- package/dist-types/commands/ListReadSetActivationJobsCommand.d.ts +2 -2
- package/dist-types/commands/ListReadSetExportJobsCommand.d.ts +2 -2
- package/dist-types/commands/ListReadSetImportJobsCommand.d.ts +2 -2
- package/dist-types/commands/ListReadSetsCommand.d.ts +2 -2
- package/dist-types/commands/ListReferenceImportJobsCommand.d.ts +2 -2
- package/dist-types/commands/ListReferenceStoresCommand.d.ts +2 -2
- package/dist-types/commands/ListReferencesCommand.d.ts +2 -2
- package/dist-types/commands/ListRunGroupsCommand.d.ts +1 -1
- package/dist-types/commands/ListRunTasksCommand.d.ts +1 -1
- package/dist-types/commands/ListRunsCommand.d.ts +1 -1
- package/dist-types/commands/ListSequenceStoresCommand.d.ts +2 -2
- package/dist-types/commands/ListTagsForResourceCommand.d.ts +1 -1
- package/dist-types/commands/ListVariantImportJobsCommand.d.ts +3 -3
- package/dist-types/commands/ListVariantStoresCommand.d.ts +3 -3
- package/dist-types/commands/ListWorkflowsCommand.d.ts +1 -1
- package/dist-types/commands/StartAnnotationImportJobCommand.d.ts +7 -7
- package/dist-types/commands/StartReadSetActivationJobCommand.d.ts +3 -3
- package/dist-types/commands/StartReadSetExportJobCommand.d.ts +3 -3
- package/dist-types/commands/StartReadSetImportJobCommand.d.ts +5 -5
- package/dist-types/commands/StartReferenceImportJobCommand.d.ts +4 -4
- package/dist-types/commands/StartRunCommand.d.ts +2 -2
- package/dist-types/commands/StartVariantImportJobCommand.d.ts +3 -3
- package/dist-types/commands/TagResourceCommand.d.ts +2 -2
- package/dist-types/commands/UntagResourceCommand.d.ts +2 -2
- package/dist-types/commands/UpdateAnnotationStoreCommand.d.ts +1 -1
- package/dist-types/commands/UpdateRunGroupCommand.d.ts +1 -1
- package/dist-types/commands/UpdateVariantStoreCommand.d.ts +1 -1
- package/dist-types/commands/UpdateWorkflowCommand.d.ts +1 -1
- package/dist-types/models/models_0.d.ts +321 -181
- package/dist-types/ts3.4/models/models_0.d.ts +225 -181
- package/package.json +37 -37
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JobStatus["IN_PROGRESS"] = "IN_PROGRESS";
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JobStatus["SUBMITTED"] = "SUBMITTED";
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export const ReadSetActivationJobStatus = {
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CANCELLED: "CANCELLED",
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CANCELLING: "CANCELLING",
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COMPLETED: "COMPLETED",
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COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
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FAILED: "FAILED",
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IN_PROGRESS: "IN_PROGRESS",
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SUBMITTED: "SUBMITTED",
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};
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export const ReadSetActivationJobItemStatus = {
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FAILED: "FAILED",
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FINISHED: "FINISHED",
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IN_PROGRESS: "IN_PROGRESS",
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NOT_STARTED: "NOT_STARTED",
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};
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export const JobStatus = {
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CANCELLED: "CANCELLED",
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COMPLETED: "COMPLETED",
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COMPLETED_WITH_FAILURES: "COMPLETED_WITH_FAILURES",
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FAILED: "FAILED",
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IN_PROGRESS: "IN_PROGRESS",
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SUBMITTED: "SUBMITTED",
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};
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export class InternalServerException extends __BaseException {
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constructor(opts) {
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return visitor._(value.$unknown[0], value.$unknown[1]);
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SchemaValueType["FLOAT"] = "FLOAT";
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SchemaValueType["INT"] = "INT";
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SchemaValueType["LONG"] = "LONG";
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SchemaValueType["STRING"] = "STRING";
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})(SchemaValueType || (SchemaValueType = {}));
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export const EncryptionType = {
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KMS: "KMS",
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};
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export const StoreFormat = {
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GFF: "GFF",
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TSV: "TSV",
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VCF: "VCF",
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};
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export const AnnotationType = {
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CHR_POS: "CHR_POS",
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CHR_POS_REF_ALT: "CHR_POS_REF_ALT",
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CHR_START_END_ONE_BASE: "CHR_START_END_ONE_BASE",
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CHR_START_END_REF_ALT_ONE_BASE: "CHR_START_END_REF_ALT_ONE_BASE",
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CHR_START_END_REF_ALT_ZERO_BASE: "CHR_START_END_REF_ALT_ZERO_BASE",
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CHR_START_END_ZERO_BASE: "CHR_START_END_ZERO_BASE",
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GENERIC: "GENERIC",
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};
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export const FormatToHeaderKey = {
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ALT: "ALT",
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CHR: "CHR",
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END: "END",
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POS: "POS",
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REF: "REF",
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START: "START",
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};
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export const SchemaValueType = {
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BOOLEAN: "BOOLEAN",
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DOUBLE: "DOUBLE",
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FLOAT: "FLOAT",
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INT: "INT",
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LONG: "LONG",
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STRING: "STRING",
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};
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export var StoreOptions;
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export const StoreStatus = {
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ACTIVE: "ACTIVE",
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CREATING: "CREATING",
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DELETING: "DELETING",
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FAILED: "FAILED",
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UPDATING: "UPDATING",
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};
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export const ReadSetExportJobItemStatus = {
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FAILED: "FAILED",
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FASTQ: "FASTQ",
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SOURCE1: "SOURCE1",
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SOURCE2: "SOURCE2",
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@@ -26,8 +26,8 @@ export interface BatchDeleteReadSetCommandOutput extends BatchDeleteReadSetRespo
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* import { OmicsClient, BatchDeleteReadSetCommand } from "@aws-sdk/client-omics"; // ES Modules import
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* // const { OmicsClient, BatchDeleteReadSetCommand } = require("@aws-sdk/client-omics"); // CommonJS import
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* "STRING_VALUE",
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|
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@@ -26,7 +26,7 @@ export interface CancelAnnotationImportJobCommandOutput extends CancelAnnotation
|
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* import { OmicsClient, CancelAnnotationImportJobCommand } from "@aws-sdk/client-omics"; // ES Modules import
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* // const { OmicsClient, CancelAnnotationImportJobCommand } = require("@aws-sdk/client-omics"); // CommonJS import
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* const input = {
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* const input = { // CancelAnnotationImportRequest
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|
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|
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|
|
@@ -26,7 +26,7 @@ export interface CancelRunCommandOutput extends __MetadataBearer {
|
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26
|
* import { OmicsClient, CancelRunCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
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* // const { OmicsClient, CancelRunCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
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|
* const client = new OmicsClient(config);
|
|
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|
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* const input = {
|
|
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|
+
* const input = { // CancelRunRequest
|
|
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|
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|
|
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|
* };
|
|
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|
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|
|
@@ -26,7 +26,7 @@ export interface CancelVariantImportJobCommandOutput extends CancelVariantImport
|
|
|
26
26
|
* import { OmicsClient, CancelVariantImportJobCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
27
|
* // const { OmicsClient, CancelVariantImportJobCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
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|
-
* const input = {
|
|
29
|
+
* const input = { // CancelVariantImportRequest
|
|
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|
* jobId: "STRING_VALUE", // required
|
|
31
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|
* };
|
|
32
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|
* const command = new CancelVariantImportJobCommand(input);
|
|
@@ -26,28 +26,28 @@ export interface CreateAnnotationStoreCommandOutput extends CreateAnnotationStor
|
|
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26
26
|
* import { OmicsClient, CreateAnnotationStoreCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
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|
* // const { OmicsClient, CreateAnnotationStoreCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
29
|
-
* const input = {
|
|
30
|
-
* reference: { // Union: only one key present
|
|
29
|
+
* const input = { // CreateAnnotationStoreRequest
|
|
30
|
+
* reference: { // ReferenceItem Union: only one key present
|
|
31
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|
* referenceArn: "STRING_VALUE",
|
|
32
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|
* },
|
|
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|
* name: "STRING_VALUE",
|
|
34
34
|
* description: "STRING_VALUE",
|
|
35
|
-
* tags: {
|
|
35
|
+
* tags: { // TagMap
|
|
36
36
|
* "<keys>": "STRING_VALUE",
|
|
37
37
|
* },
|
|
38
|
-
* sseConfig: {
|
|
38
|
+
* sseConfig: { // SseConfig
|
|
39
39
|
* type: "STRING_VALUE", // required
|
|
40
40
|
* keyArn: "STRING_VALUE",
|
|
41
41
|
* },
|
|
42
42
|
* storeFormat: "STRING_VALUE", // required
|
|
43
|
-
* storeOptions: { // Union: only one key present
|
|
44
|
-
* tsvStoreOptions: {
|
|
43
|
+
* storeOptions: { // StoreOptions Union: only one key present
|
|
44
|
+
* tsvStoreOptions: { // TsvStoreOptions
|
|
45
45
|
* annotationType: "STRING_VALUE",
|
|
46
|
-
* formatToHeader: {
|
|
46
|
+
* formatToHeader: { // FormatToHeader
|
|
47
47
|
* "<keys>": "STRING_VALUE",
|
|
48
48
|
* },
|
|
49
|
-
* schema: [
|
|
50
|
-
* {
|
|
49
|
+
* schema: [ // Schema
|
|
50
|
+
* { // SchemaItem
|
|
51
51
|
* "<keys>": "STRING_VALUE",
|
|
52
52
|
* },
|
|
53
53
|
* ],
|
|
@@ -26,14 +26,14 @@ export interface CreateReferenceStoreCommandOutput extends CreateReferenceStoreR
|
|
|
26
26
|
* import { OmicsClient, CreateReferenceStoreCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
27
|
* // const { OmicsClient, CreateReferenceStoreCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
29
|
-
* const input = {
|
|
29
|
+
* const input = { // CreateReferenceStoreRequest
|
|
30
30
|
* name: "STRING_VALUE", // required
|
|
31
31
|
* description: "STRING_VALUE",
|
|
32
|
-
* sseConfig: {
|
|
32
|
+
* sseConfig: { // SseConfig
|
|
33
33
|
* type: "STRING_VALUE", // required
|
|
34
34
|
* keyArn: "STRING_VALUE",
|
|
35
35
|
* },
|
|
36
|
-
* tags: {
|
|
36
|
+
* tags: { // TagMap
|
|
37
37
|
* "<keys>": "STRING_VALUE",
|
|
38
38
|
* },
|
|
39
39
|
* clientToken: "STRING_VALUE",
|
|
@@ -26,12 +26,12 @@ export interface CreateRunGroupCommandOutput extends CreateRunGroupResponse, __M
|
|
|
26
26
|
* import { OmicsClient, CreateRunGroupCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
27
|
* // const { OmicsClient, CreateRunGroupCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
29
|
-
* const input = {
|
|
29
|
+
* const input = { // CreateRunGroupRequest
|
|
30
30
|
* name: "STRING_VALUE",
|
|
31
31
|
* maxCpus: Number("int"),
|
|
32
32
|
* maxRuns: Number("int"),
|
|
33
33
|
* maxDuration: Number("int"),
|
|
34
|
-
* tags: {
|
|
34
|
+
* tags: { // TagMap
|
|
35
35
|
* "<keys>": "STRING_VALUE",
|
|
36
36
|
* },
|
|
37
37
|
* requestId: "STRING_VALUE", // required
|
|
@@ -26,14 +26,14 @@ export interface CreateSequenceStoreCommandOutput extends CreateSequenceStoreRes
|
|
|
26
26
|
* import { OmicsClient, CreateSequenceStoreCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
27
|
* // const { OmicsClient, CreateSequenceStoreCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
29
|
-
* const input = {
|
|
29
|
+
* const input = { // CreateSequenceStoreRequest
|
|
30
30
|
* name: "STRING_VALUE", // required
|
|
31
31
|
* description: "STRING_VALUE",
|
|
32
|
-
* sseConfig: {
|
|
32
|
+
* sseConfig: { // SseConfig
|
|
33
33
|
* type: "STRING_VALUE", // required
|
|
34
34
|
* keyArn: "STRING_VALUE",
|
|
35
35
|
* },
|
|
36
|
-
* tags: {
|
|
36
|
+
* tags: { // TagMap
|
|
37
37
|
* "<keys>": "STRING_VALUE",
|
|
38
38
|
* },
|
|
39
39
|
* clientToken: "STRING_VALUE",
|
|
@@ -26,16 +26,16 @@ export interface CreateVariantStoreCommandOutput extends CreateVariantStoreRespo
|
|
|
26
26
|
* import { OmicsClient, CreateVariantStoreCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
27
|
* // const { OmicsClient, CreateVariantStoreCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
29
|
-
* const input = {
|
|
30
|
-
* reference: { // Union: only one key present
|
|
29
|
+
* const input = { // CreateVariantStoreRequest
|
|
30
|
+
* reference: { // ReferenceItem Union: only one key present
|
|
31
31
|
* referenceArn: "STRING_VALUE",
|
|
32
32
|
* },
|
|
33
33
|
* name: "STRING_VALUE",
|
|
34
34
|
* description: "STRING_VALUE",
|
|
35
|
-
* tags: {
|
|
35
|
+
* tags: { // TagMap
|
|
36
36
|
* "<keys>": "STRING_VALUE",
|
|
37
37
|
* },
|
|
38
|
-
* sseConfig: {
|
|
38
|
+
* sseConfig: { // SseConfig
|
|
39
39
|
* type: "STRING_VALUE", // required
|
|
40
40
|
* keyArn: "STRING_VALUE",
|
|
41
41
|
* },
|
|
@@ -26,21 +26,21 @@ export interface CreateWorkflowCommandOutput extends CreateWorkflowResponse, __M
|
|
|
26
26
|
* import { OmicsClient, CreateWorkflowCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
27
|
* // const { OmicsClient, CreateWorkflowCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
29
|
-
* const input = {
|
|
29
|
+
* const input = { // CreateWorkflowRequest
|
|
30
30
|
* name: "STRING_VALUE",
|
|
31
31
|
* description: "STRING_VALUE",
|
|
32
32
|
* engine: "STRING_VALUE",
|
|
33
33
|
* definitionZip: "BLOB_VALUE",
|
|
34
34
|
* definitionUri: "STRING_VALUE",
|
|
35
35
|
* main: "STRING_VALUE",
|
|
36
|
-
* parameterTemplate: {
|
|
37
|
-
* "<keys>": {
|
|
36
|
+
* parameterTemplate: { // WorkflowParameterTemplate
|
|
37
|
+
* "<keys>": { // WorkflowParameter
|
|
38
38
|
* description: "STRING_VALUE",
|
|
39
39
|
* optional: true || false,
|
|
40
40
|
* },
|
|
41
41
|
* },
|
|
42
42
|
* storageCapacity: Number("int"),
|
|
43
|
-
* tags: {
|
|
43
|
+
* tags: { // TagMap
|
|
44
44
|
* "<keys>": "STRING_VALUE",
|
|
45
45
|
* },
|
|
46
46
|
* requestId: "STRING_VALUE", // required
|
|
@@ -26,7 +26,7 @@ export interface DeleteAnnotationStoreCommandOutput extends DeleteAnnotationStor
|
|
|
26
26
|
* import { OmicsClient, DeleteAnnotationStoreCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
27
|
* // const { OmicsClient, DeleteAnnotationStoreCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
29
|
-
* const input = {
|
|
29
|
+
* const input = { // DeleteAnnotationStoreRequest
|
|
30
30
|
* name: "STRING_VALUE", // required
|
|
31
31
|
* force: true || false,
|
|
32
32
|
* };
|
|
@@ -26,7 +26,7 @@ export interface DeleteReferenceCommandOutput extends DeleteReferenceResponse, _
|
|
|
26
26
|
* import { OmicsClient, DeleteReferenceCommand } from "@aws-sdk/client-omics"; // ES Modules import
|
|
27
27
|
* // const { OmicsClient, DeleteReferenceCommand } = require("@aws-sdk/client-omics"); // CommonJS import
|
|
28
28
|
* const client = new OmicsClient(config);
|
|
29
|
-
* const input = {
|
|
29
|
+
* const input = { // DeleteReferenceRequest
|
|
30
30
|
* id: "STRING_VALUE", // required
|
|
31
31
|
* referenceStoreId: "STRING_VALUE", // required
|
|
32
32
|
* };
|