@aws-sdk/client-omics 3.296.0 → 3.297.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist-types/Omics.d.ts +67 -0
- package/dist-types/OmicsClient.d.ts +24 -4
- package/dist-types/commands/BatchDeleteReadSetCommand.d.ts +16 -0
- package/dist-types/commands/CancelAnnotationImportJobCommand.d.ts +16 -0
- package/dist-types/commands/CancelRunCommand.d.ts +16 -0
- package/dist-types/commands/CancelVariantImportJobCommand.d.ts +16 -0
- package/dist-types/commands/CreateAnnotationStoreCommand.d.ts +16 -0
- package/dist-types/commands/CreateReferenceStoreCommand.d.ts +16 -0
- package/dist-types/commands/CreateRunGroupCommand.d.ts +16 -0
- package/dist-types/commands/CreateSequenceStoreCommand.d.ts +16 -0
- package/dist-types/commands/CreateVariantStoreCommand.d.ts +16 -0
- package/dist-types/commands/CreateWorkflowCommand.d.ts +16 -0
- package/dist-types/commands/DeleteAnnotationStoreCommand.d.ts +16 -0
- package/dist-types/commands/DeleteReferenceCommand.d.ts +16 -0
- package/dist-types/commands/DeleteReferenceStoreCommand.d.ts +16 -0
- package/dist-types/commands/DeleteRunCommand.d.ts +16 -0
- package/dist-types/commands/DeleteRunGroupCommand.d.ts +16 -0
- package/dist-types/commands/DeleteSequenceStoreCommand.d.ts +16 -0
- package/dist-types/commands/DeleteVariantStoreCommand.d.ts +16 -0
- package/dist-types/commands/DeleteWorkflowCommand.d.ts +16 -0
- package/dist-types/commands/GetAnnotationImportJobCommand.d.ts +16 -0
- package/dist-types/commands/GetAnnotationStoreCommand.d.ts +16 -0
- package/dist-types/commands/GetReadSetActivationJobCommand.d.ts +16 -0
- package/dist-types/commands/GetReadSetCommand.d.ts +16 -0
- package/dist-types/commands/GetReadSetExportJobCommand.d.ts +16 -0
- package/dist-types/commands/GetReadSetImportJobCommand.d.ts +16 -0
- package/dist-types/commands/GetReadSetMetadataCommand.d.ts +16 -0
- package/dist-types/commands/GetReferenceCommand.d.ts +16 -0
- package/dist-types/commands/GetReferenceImportJobCommand.d.ts +16 -0
- package/dist-types/commands/GetReferenceMetadataCommand.d.ts +16 -0
- package/dist-types/commands/GetReferenceStoreCommand.d.ts +16 -0
- package/dist-types/commands/GetRunCommand.d.ts +16 -0
- package/dist-types/commands/GetRunGroupCommand.d.ts +16 -0
- package/dist-types/commands/GetRunTaskCommand.d.ts +16 -0
- package/dist-types/commands/GetSequenceStoreCommand.d.ts +16 -0
- package/dist-types/commands/GetVariantImportJobCommand.d.ts +16 -0
- package/dist-types/commands/GetVariantStoreCommand.d.ts +16 -0
- package/dist-types/commands/GetWorkflowCommand.d.ts +16 -0
- package/dist-types/commands/ListAnnotationImportJobsCommand.d.ts +16 -0
- package/dist-types/commands/ListAnnotationStoresCommand.d.ts +16 -0
- package/dist-types/commands/ListReadSetActivationJobsCommand.d.ts +16 -0
- package/dist-types/commands/ListReadSetExportJobsCommand.d.ts +16 -0
- package/dist-types/commands/ListReadSetImportJobsCommand.d.ts +16 -0
- package/dist-types/commands/ListReadSetsCommand.d.ts +16 -0
- package/dist-types/commands/ListReferenceImportJobsCommand.d.ts +16 -0
- package/dist-types/commands/ListReferenceStoresCommand.d.ts +16 -0
- package/dist-types/commands/ListReferencesCommand.d.ts +16 -0
- package/dist-types/commands/ListRunGroupsCommand.d.ts +16 -0
- package/dist-types/commands/ListRunTasksCommand.d.ts +16 -0
- package/dist-types/commands/ListRunsCommand.d.ts +16 -0
- package/dist-types/commands/ListSequenceStoresCommand.d.ts +16 -0
- package/dist-types/commands/ListTagsForResourceCommand.d.ts +16 -0
- package/dist-types/commands/ListVariantImportJobsCommand.d.ts +16 -0
- package/dist-types/commands/ListVariantStoresCommand.d.ts +16 -0
- package/dist-types/commands/ListWorkflowsCommand.d.ts +16 -0
- package/dist-types/commands/StartAnnotationImportJobCommand.d.ts +16 -0
- package/dist-types/commands/StartReadSetActivationJobCommand.d.ts +16 -0
- package/dist-types/commands/StartReadSetExportJobCommand.d.ts +16 -0
- package/dist-types/commands/StartReadSetImportJobCommand.d.ts +16 -0
- package/dist-types/commands/StartReferenceImportJobCommand.d.ts +16 -0
- package/dist-types/commands/StartRunCommand.d.ts +16 -0
- package/dist-types/commands/StartVariantImportJobCommand.d.ts +16 -0
- package/dist-types/commands/TagResourceCommand.d.ts +16 -0
- package/dist-types/commands/UntagResourceCommand.d.ts +16 -0
- package/dist-types/commands/UpdateAnnotationStoreCommand.d.ts +16 -0
- package/dist-types/commands/UpdateRunGroupCommand.d.ts +16 -0
- package/dist-types/commands/UpdateVariantStoreCommand.d.ts +16 -0
- package/dist-types/commands/UpdateWorkflowCommand.d.ts +16 -0
- package/dist-types/models/OmicsServiceException.d.ts +2 -0
- package/dist-types/models/models_0.d.ts +535 -0
- package/dist-types/pagination/Interfaces.d.ts +3 -0
- package/dist-types/pagination/ListAnnotationImportJobsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListAnnotationStoresPaginator.d.ts +3 -0
- package/dist-types/pagination/ListReadSetActivationJobsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListReadSetExportJobsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListReadSetImportJobsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListReadSetsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListReferenceImportJobsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListReferenceStoresPaginator.d.ts +3 -0
- package/dist-types/pagination/ListReferencesPaginator.d.ts +3 -0
- package/dist-types/pagination/ListRunGroupsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListRunTasksPaginator.d.ts +3 -0
- package/dist-types/pagination/ListRunsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListSequenceStoresPaginator.d.ts +3 -0
- package/dist-types/pagination/ListVariantImportJobsPaginator.d.ts +3 -0
- package/dist-types/pagination/ListVariantStoresPaginator.d.ts +3 -0
- package/dist-types/pagination/ListWorkflowsPaginator.d.ts +3 -0
- package/package.json +3 -3
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import { OmicsServiceException as __BaseException } from "./OmicsServiceException";
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* <p>A read set activation job.</p>
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* The Job was cancelled
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source: string | undefined;
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|
* <p>A genome reference.</p>
|
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473
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|
*/
|
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474
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|
export type ReferenceItem = ReferenceItem.ReferenceArnMember | ReferenceItem.$UnknownMember;
|
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|
+
/**
|
|
531
|
+
* @public
|
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|
+
*/
|
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475
533
|
export declare namespace ReferenceItem {
|
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476
534
|
/**
|
|
477
535
|
* <p>The reference's ARN.</p>
|
|
@@ -490,6 +548,9 @@ export declare namespace ReferenceItem {
|
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|
}
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|
const visit: <T>(value: ReferenceItem, visitor: Visitor<T>) => T;
|
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|
}
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|
+
/**
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|
+
* @public
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|
+
*/
|
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554
|
export declare enum EncryptionType {
|
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494
555
|
/**
|
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|
* KMS
|
|
@@ -497,6 +558,7 @@ export declare enum EncryptionType {
|
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|
KMS = "KMS"
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|
}
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|
/**
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|
+
* @public
|
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500
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|
* <p>Server-side encryption (SSE) settings for a store.</p>
|
|
501
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|
*/
|
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|
export interface SseConfig {
|
|
@@ -509,6 +571,9 @@ export interface SseConfig {
|
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|
*/
|
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|
keyArn?: string;
|
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|
}
|
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|
+
/**
|
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|
+
* @public
|
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|
+
*/
|
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|
export declare enum StoreFormat {
|
|
513
578
|
/**
|
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514
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|
* GFF3 Format
|
|
@@ -523,6 +588,9 @@ export declare enum StoreFormat {
|
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|
*/
|
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|
VCF = "VCF"
|
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|
}
|
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|
+
/**
|
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592
|
+
* @public
|
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|
+
*/
|
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526
594
|
export declare enum AnnotationType {
|
|
527
595
|
/**
|
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528
596
|
* Contains contig and 1-base position
|
|
@@ -553,6 +621,9 @@ export declare enum AnnotationType {
|
|
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553
621
|
*/
|
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|
GENERIC = "GENERIC"
|
|
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623
|
}
|
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|
+
/**
|
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|
+
* @public
|
|
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|
+
*/
|
|
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627
|
export declare enum FormatToHeaderKey {
|
|
557
628
|
ALT = "ALT",
|
|
558
629
|
CHR = "CHR",
|
|
@@ -561,6 +632,9 @@ export declare enum FormatToHeaderKey {
|
|
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561
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|
REF = "REF",
|
|
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|
START = "START"
|
|
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|
}
|
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|
+
/**
|
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|
+
* @public
|
|
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|
+
*/
|
|
564
638
|
export declare enum SchemaValueType {
|
|
565
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|
/**
|
|
566
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|
* BOOLEAN type
|
|
@@ -588,6 +662,7 @@ export declare enum SchemaValueType {
|
|
|
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|
STRING = "STRING"
|
|
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|
}
|
|
590
664
|
/**
|
|
665
|
+
* @public
|
|
591
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|
* <p>File settings for a TSV store.</p>
|
|
592
667
|
*/
|
|
593
668
|
export interface TsvStoreOptions {
|
|
@@ -605,9 +680,13 @@ export interface TsvStoreOptions {
|
|
|
605
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|
schema?: Record<string, SchemaValueType | string>[];
|
|
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|
}
|
|
607
682
|
/**
|
|
683
|
+
* @public
|
|
608
684
|
* <p>Settings for a store.</p>
|
|
609
685
|
*/
|
|
610
686
|
export type StoreOptions = StoreOptions.TsvStoreOptionsMember | StoreOptions.$UnknownMember;
|
|
687
|
+
/**
|
|
688
|
+
* @public
|
|
689
|
+
*/
|
|
611
690
|
export declare namespace StoreOptions {
|
|
612
691
|
/**
|
|
613
692
|
* <p>File settings for a TSV store.</p>
|
|
@@ -626,6 +705,9 @@ export declare namespace StoreOptions {
|
|
|
626
705
|
}
|
|
627
706
|
const visit: <T>(value: StoreOptions, visitor: Visitor<T>) => T;
|
|
628
707
|
}
|
|
708
|
+
/**
|
|
709
|
+
* @public
|
|
710
|
+
*/
|
|
629
711
|
export interface CreateAnnotationStoreRequest {
|
|
630
712
|
/**
|
|
631
713
|
* <p>The genome reference for the store's annotations.</p>
|
|
@@ -656,6 +738,9 @@ export interface CreateAnnotationStoreRequest {
|
|
|
656
738
|
*/
|
|
657
739
|
storeOptions?: StoreOptions;
|
|
658
740
|
}
|
|
741
|
+
/**
|
|
742
|
+
* @public
|
|
743
|
+
*/
|
|
659
744
|
export declare enum StoreStatus {
|
|
660
745
|
/**
|
|
661
746
|
* The Store is active
|
|
@@ -678,6 +763,9 @@ export declare enum StoreStatus {
|
|
|
678
763
|
*/
|
|
679
764
|
UPDATING = "UPDATING"
|
|
680
765
|
}
|
|
766
|
+
/**
|
|
767
|
+
* @public
|
|
768
|
+
*/
|
|
681
769
|
export interface CreateAnnotationStoreResponse {
|
|
682
770
|
/**
|
|
683
771
|
* <p>The store's ID.</p>
|
|
@@ -708,6 +796,9 @@ export interface CreateAnnotationStoreResponse {
|
|
|
708
796
|
*/
|
|
709
797
|
creationTime: Date | undefined;
|
|
710
798
|
}
|
|
799
|
+
/**
|
|
800
|
+
* @public
|
|
801
|
+
*/
|
|
711
802
|
export interface DeleteAnnotationStoreRequest {
|
|
712
803
|
/**
|
|
713
804
|
* <p>The store's name.</p>
|
|
@@ -718,18 +809,27 @@ export interface DeleteAnnotationStoreRequest {
|
|
|
718
809
|
*/
|
|
719
810
|
force?: boolean;
|
|
720
811
|
}
|
|
812
|
+
/**
|
|
813
|
+
* @public
|
|
814
|
+
*/
|
|
721
815
|
export interface DeleteAnnotationStoreResponse {
|
|
722
816
|
/**
|
|
723
817
|
* <p>The store's status.</p>
|
|
724
818
|
*/
|
|
725
819
|
status: StoreStatus | string | undefined;
|
|
726
820
|
}
|
|
821
|
+
/**
|
|
822
|
+
* @public
|
|
823
|
+
*/
|
|
727
824
|
export interface GetAnnotationStoreRequest {
|
|
728
825
|
/**
|
|
729
826
|
* <p>The store's name.</p>
|
|
730
827
|
*/
|
|
731
828
|
name: string | undefined;
|
|
732
829
|
}
|
|
830
|
+
/**
|
|
831
|
+
* @public
|
|
832
|
+
*/
|
|
733
833
|
export interface GetAnnotationStoreResponse {
|
|
734
834
|
/**
|
|
735
835
|
* <p>The store's ID.</p>
|
|
@@ -789,6 +889,7 @@ export interface GetAnnotationStoreResponse {
|
|
|
789
889
|
storeSizeBytes: number | undefined;
|
|
790
890
|
}
|
|
791
891
|
/**
|
|
892
|
+
* @public
|
|
792
893
|
* <p>A filter for annotation stores.</p>
|
|
793
894
|
*/
|
|
794
895
|
export interface ListAnnotationStoresFilter {
|
|
@@ -797,6 +898,9 @@ export interface ListAnnotationStoresFilter {
|
|
|
797
898
|
*/
|
|
798
899
|
status?: StoreStatus | string;
|
|
799
900
|
}
|
|
901
|
+
/**
|
|
902
|
+
* @public
|
|
903
|
+
*/
|
|
800
904
|
export interface ListAnnotationStoresRequest {
|
|
801
905
|
/**
|
|
802
906
|
* <p>IDs of stores to list.</p>
|
|
@@ -816,6 +920,7 @@ export interface ListAnnotationStoresRequest {
|
|
|
816
920
|
filter?: ListAnnotationStoresFilter;
|
|
817
921
|
}
|
|
818
922
|
/**
|
|
923
|
+
* @public
|
|
819
924
|
* <p>An annotation store.</p>
|
|
820
925
|
*/
|
|
821
926
|
export interface AnnotationStoreItem {
|
|
@@ -868,6 +973,9 @@ export interface AnnotationStoreItem {
|
|
|
868
973
|
*/
|
|
869
974
|
storeSizeBytes: number | undefined;
|
|
870
975
|
}
|
|
976
|
+
/**
|
|
977
|
+
* @public
|
|
978
|
+
*/
|
|
871
979
|
export interface ListAnnotationStoresResponse {
|
|
872
980
|
/**
|
|
873
981
|
* <p>A list of stores.</p>
|
|
@@ -878,6 +986,9 @@ export interface ListAnnotationStoresResponse {
|
|
|
878
986
|
*/
|
|
879
987
|
nextToken?: string;
|
|
880
988
|
}
|
|
989
|
+
/**
|
|
990
|
+
* @public
|
|
991
|
+
*/
|
|
881
992
|
export interface UpdateAnnotationStoreRequest {
|
|
882
993
|
/**
|
|
883
994
|
* <p>A name for the store.</p>
|
|
@@ -888,6 +999,9 @@ export interface UpdateAnnotationStoreRequest {
|
|
|
888
999
|
*/
|
|
889
1000
|
description?: string;
|
|
890
1001
|
}
|
|
1002
|
+
/**
|
|
1003
|
+
* @public
|
|
1004
|
+
*/
|
|
891
1005
|
export interface UpdateAnnotationStoreResponse {
|
|
892
1006
|
/**
|
|
893
1007
|
* <p>The store's ID.</p>
|
|
@@ -926,6 +1040,9 @@ export interface UpdateAnnotationStoreResponse {
|
|
|
926
1040
|
*/
|
|
927
1041
|
storeFormat?: StoreFormat | string;
|
|
928
1042
|
}
|
|
1043
|
+
/**
|
|
1044
|
+
* @public
|
|
1045
|
+
*/
|
|
929
1046
|
export interface BatchDeleteReadSetRequest {
|
|
930
1047
|
/**
|
|
931
1048
|
* <p>The read sets' IDs.</p>
|
|
@@ -937,6 +1054,7 @@ export interface BatchDeleteReadSetRequest {
|
|
|
937
1054
|
sequenceStoreId: string | undefined;
|
|
938
1055
|
}
|
|
939
1056
|
/**
|
|
1057
|
+
* @public
|
|
940
1058
|
* <p>An error from a batch read set operation.</p>
|
|
941
1059
|
*/
|
|
942
1060
|
export interface ReadSetBatchError {
|
|
@@ -953,6 +1071,9 @@ export interface ReadSetBatchError {
|
|
|
953
1071
|
*/
|
|
954
1072
|
message: string | undefined;
|
|
955
1073
|
}
|
|
1074
|
+
/**
|
|
1075
|
+
* @public
|
|
1076
|
+
*/
|
|
956
1077
|
export interface BatchDeleteReadSetResponse {
|
|
957
1078
|
/**
|
|
958
1079
|
* <p>Errors returned by individual delete operations.</p>
|
|
@@ -960,6 +1081,7 @@ export interface BatchDeleteReadSetResponse {
|
|
|
960
1081
|
errors?: ReadSetBatchError[];
|
|
961
1082
|
}
|
|
962
1083
|
/**
|
|
1084
|
+
* @public
|
|
963
1085
|
* <p>The request timed out.</p>
|
|
964
1086
|
*/
|
|
965
1087
|
export declare class RequestTimeoutException extends __BaseException {
|
|
@@ -970,20 +1092,32 @@ export declare class RequestTimeoutException extends __BaseException {
|
|
|
970
1092
|
*/
|
|
971
1093
|
constructor(opts: __ExceptionOptionType<RequestTimeoutException, __BaseException>);
|
|
972
1094
|
}
|
|
1095
|
+
/**
|
|
1096
|
+
* @public
|
|
1097
|
+
*/
|
|
973
1098
|
export interface CancelRunRequest {
|
|
974
1099
|
/**
|
|
975
1100
|
* <p>The run's ID.</p>
|
|
976
1101
|
*/
|
|
977
1102
|
id: string | undefined;
|
|
978
1103
|
}
|
|
1104
|
+
/**
|
|
1105
|
+
* @public
|
|
1106
|
+
*/
|
|
979
1107
|
export interface CancelVariantImportRequest {
|
|
980
1108
|
/**
|
|
981
1109
|
* <p>The job's ID.</p>
|
|
982
1110
|
*/
|
|
983
1111
|
jobId: string | undefined;
|
|
984
1112
|
}
|
|
1113
|
+
/**
|
|
1114
|
+
* @public
|
|
1115
|
+
*/
|
|
985
1116
|
export interface CancelVariantImportResponse {
|
|
986
1117
|
}
|
|
1118
|
+
/**
|
|
1119
|
+
* @public
|
|
1120
|
+
*/
|
|
987
1121
|
export interface CreateReferenceStoreRequest {
|
|
988
1122
|
/**
|
|
989
1123
|
* <p>A name for the store.</p>
|
|
@@ -1006,6 +1140,9 @@ export interface CreateReferenceStoreRequest {
|
|
|
1006
1140
|
*/
|
|
1007
1141
|
clientToken?: string;
|
|
1008
1142
|
}
|
|
1143
|
+
/**
|
|
1144
|
+
* @public
|
|
1145
|
+
*/
|
|
1009
1146
|
export interface CreateReferenceStoreResponse {
|
|
1010
1147
|
/**
|
|
1011
1148
|
* <p>The store's ID.</p>
|
|
@@ -1032,6 +1169,9 @@ export interface CreateReferenceStoreResponse {
|
|
|
1032
1169
|
*/
|
|
1033
1170
|
creationTime: Date | undefined;
|
|
1034
1171
|
}
|
|
1172
|
+
/**
|
|
1173
|
+
* @public
|
|
1174
|
+
*/
|
|
1035
1175
|
export interface CreateRunGroupRequest {
|
|
1036
1176
|
/**
|
|
1037
1177
|
* <p>A name for the group.</p>
|
|
@@ -1058,6 +1198,9 @@ export interface CreateRunGroupRequest {
|
|
|
1058
1198
|
*/
|
|
1059
1199
|
requestId?: string;
|
|
1060
1200
|
}
|
|
1201
|
+
/**
|
|
1202
|
+
* @public
|
|
1203
|
+
*/
|
|
1061
1204
|
export interface CreateRunGroupResponse {
|
|
1062
1205
|
/**
|
|
1063
1206
|
* <p>The group's ARN.</p>
|
|
@@ -1072,6 +1215,9 @@ export interface CreateRunGroupResponse {
|
|
|
1072
1215
|
*/
|
|
1073
1216
|
tags?: Record<string, string>;
|
|
1074
1217
|
}
|
|
1218
|
+
/**
|
|
1219
|
+
* @public
|
|
1220
|
+
*/
|
|
1075
1221
|
export interface CreateSequenceStoreRequest {
|
|
1076
1222
|
/**
|
|
1077
1223
|
* <p>A name for the store.</p>
|
|
@@ -1094,6 +1240,9 @@ export interface CreateSequenceStoreRequest {
|
|
|
1094
1240
|
*/
|
|
1095
1241
|
clientToken?: string;
|
|
1096
1242
|
}
|
|
1243
|
+
/**
|
|
1244
|
+
* @public
|
|
1245
|
+
*/
|
|
1097
1246
|
export interface CreateSequenceStoreResponse {
|
|
1098
1247
|
/**
|
|
1099
1248
|
* <p>The store's ID.</p>
|
|
@@ -1120,6 +1269,9 @@ export interface CreateSequenceStoreResponse {
|
|
|
1120
1269
|
*/
|
|
1121
1270
|
creationTime: Date | undefined;
|
|
1122
1271
|
}
|
|
1272
|
+
/**
|
|
1273
|
+
* @public
|
|
1274
|
+
*/
|
|
1123
1275
|
export interface CreateVariantStoreRequest {
|
|
1124
1276
|
/**
|
|
1125
1277
|
* <p>The genome reference for the store's variants.</p>
|
|
@@ -1142,6 +1294,9 @@ export interface CreateVariantStoreRequest {
|
|
|
1142
1294
|
*/
|
|
1143
1295
|
sseConfig?: SseConfig;
|
|
1144
1296
|
}
|
|
1297
|
+
/**
|
|
1298
|
+
* @public
|
|
1299
|
+
*/
|
|
1145
1300
|
export interface CreateVariantStoreResponse {
|
|
1146
1301
|
/**
|
|
1147
1302
|
* <p>The store's ID.</p>
|
|
@@ -1164,11 +1319,15 @@ export interface CreateVariantStoreResponse {
|
|
|
1164
1319
|
*/
|
|
1165
1320
|
creationTime: Date | undefined;
|
|
1166
1321
|
}
|
|
1322
|
+
/**
|
|
1323
|
+
* @public
|
|
1324
|
+
*/
|
|
1167
1325
|
export declare enum WorkflowEngine {
|
|
1168
1326
|
NEXTFLOW = "NEXTFLOW",
|
|
1169
1327
|
WDL = "WDL"
|
|
1170
1328
|
}
|
|
1171
1329
|
/**
|
|
1330
|
+
* @public
|
|
1172
1331
|
* <p>A workflow parameter.</p>
|
|
1173
1332
|
*/
|
|
1174
1333
|
export interface WorkflowParameter {
|
|
@@ -1181,6 +1340,9 @@ export interface WorkflowParameter {
|
|
|
1181
1340
|
*/
|
|
1182
1341
|
optional?: boolean;
|
|
1183
1342
|
}
|
|
1343
|
+
/**
|
|
1344
|
+
* @public
|
|
1345
|
+
*/
|
|
1184
1346
|
export interface CreateWorkflowRequest {
|
|
1185
1347
|
/**
|
|
1186
1348
|
* <p>A name for the workflow.</p>
|
|
@@ -1223,6 +1385,9 @@ export interface CreateWorkflowRequest {
|
|
|
1223
1385
|
*/
|
|
1224
1386
|
requestId?: string;
|
|
1225
1387
|
}
|
|
1388
|
+
/**
|
|
1389
|
+
* @public
|
|
1390
|
+
*/
|
|
1226
1391
|
export declare enum WorkflowStatus {
|
|
1227
1392
|
ACTIVE = "ACTIVE",
|
|
1228
1393
|
CREATING = "CREATING",
|
|
@@ -1231,6 +1396,9 @@ export declare enum WorkflowStatus {
|
|
|
1231
1396
|
INACTIVE = "INACTIVE",
|
|
1232
1397
|
UPDATING = "UPDATING"
|
|
1233
1398
|
}
|
|
1399
|
+
/**
|
|
1400
|
+
* @public
|
|
1401
|
+
*/
|
|
1234
1402
|
export interface CreateWorkflowResponse {
|
|
1235
1403
|
/**
|
|
1236
1404
|
* <p>The workflow's ARN.</p>
|
|
@@ -1249,6 +1417,9 @@ export interface CreateWorkflowResponse {
|
|
|
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1417
|
*/
|
|
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1418
|
tags?: Record<string, string>;
|
|
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1419
|
}
|
|
1420
|
+
/**
|
|
1421
|
+
* @public
|
|
1422
|
+
*/
|
|
1252
1423
|
export interface DeleteReferenceRequest {
|
|
1253
1424
|
/**
|
|
1254
1425
|
* <p>The reference's ID.</p>
|
|
@@ -1259,36 +1430,60 @@ export interface DeleteReferenceRequest {
|
|
|
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1430
|
*/
|
|
1260
1431
|
referenceStoreId: string | undefined;
|
|
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1432
|
}
|
|
1433
|
+
/**
|
|
1434
|
+
* @public
|
|
1435
|
+
*/
|
|
1262
1436
|
export interface DeleteReferenceResponse {
|
|
1263
1437
|
}
|
|
1438
|
+
/**
|
|
1439
|
+
* @public
|
|
1440
|
+
*/
|
|
1264
1441
|
export interface DeleteReferenceStoreRequest {
|
|
1265
1442
|
/**
|
|
1266
1443
|
* <p>The store's ID.</p>
|
|
1267
1444
|
*/
|
|
1268
1445
|
id: string | undefined;
|
|
1269
1446
|
}
|
|
1447
|
+
/**
|
|
1448
|
+
* @public
|
|
1449
|
+
*/
|
|
1270
1450
|
export interface DeleteReferenceStoreResponse {
|
|
1271
1451
|
}
|
|
1452
|
+
/**
|
|
1453
|
+
* @public
|
|
1454
|
+
*/
|
|
1272
1455
|
export interface DeleteRunRequest {
|
|
1273
1456
|
/**
|
|
1274
1457
|
* <p>The run's ID.</p>
|
|
1275
1458
|
*/
|
|
1276
1459
|
id: string | undefined;
|
|
1277
1460
|
}
|
|
1461
|
+
/**
|
|
1462
|
+
* @public
|
|
1463
|
+
*/
|
|
1278
1464
|
export interface DeleteRunGroupRequest {
|
|
1279
1465
|
/**
|
|
1280
1466
|
* <p>The run group's ID.</p>
|
|
1281
1467
|
*/
|
|
1282
1468
|
id: string | undefined;
|
|
1283
1469
|
}
|
|
1470
|
+
/**
|
|
1471
|
+
* @public
|
|
1472
|
+
*/
|
|
1284
1473
|
export interface DeleteSequenceStoreRequest {
|
|
1285
1474
|
/**
|
|
1286
1475
|
* <p>The sequence store's ID.</p>
|
|
1287
1476
|
*/
|
|
1288
1477
|
id: string | undefined;
|
|
1289
1478
|
}
|
|
1479
|
+
/**
|
|
1480
|
+
* @public
|
|
1481
|
+
*/
|
|
1290
1482
|
export interface DeleteSequenceStoreResponse {
|
|
1291
1483
|
}
|
|
1484
|
+
/**
|
|
1485
|
+
* @public
|
|
1486
|
+
*/
|
|
1292
1487
|
export interface DeleteVariantStoreRequest {
|
|
1293
1488
|
/**
|
|
1294
1489
|
* <p>The store's name.</p>
|
|
@@ -1299,12 +1494,18 @@ export interface DeleteVariantStoreRequest {
|
|
|
1299
1494
|
*/
|
|
1300
1495
|
force?: boolean;
|
|
1301
1496
|
}
|
|
1497
|
+
/**
|
|
1498
|
+
* @public
|
|
1499
|
+
*/
|
|
1302
1500
|
export interface DeleteVariantStoreResponse {
|
|
1303
1501
|
/**
|
|
1304
1502
|
* <p>The store's status.</p>
|
|
1305
1503
|
*/
|
|
1306
1504
|
status: StoreStatus | string | undefined;
|
|
1307
1505
|
}
|
|
1506
|
+
/**
|
|
1507
|
+
* @public
|
|
1508
|
+
*/
|
|
1308
1509
|
export interface DeleteWorkflowRequest {
|
|
1309
1510
|
/**
|
|
1310
1511
|
* <p>The workflow's ID.</p>
|
|
@@ -1312,6 +1513,7 @@ export interface DeleteWorkflowRequest {
|
|
|
1312
1513
|
id: string | undefined;
|
|
1313
1514
|
}
|
|
1314
1515
|
/**
|
|
1516
|
+
* @public
|
|
1315
1517
|
* <p>A read set.</p>
|
|
1316
1518
|
*/
|
|
1317
1519
|
export interface ExportReadSet {
|
|
@@ -1320,6 +1522,9 @@ export interface ExportReadSet {
|
|
|
1320
1522
|
*/
|
|
1321
1523
|
readSetId: string | undefined;
|
|
1322
1524
|
}
|
|
1525
|
+
/**
|
|
1526
|
+
* @public
|
|
1527
|
+
*/
|
|
1323
1528
|
export declare enum ReadSetExportJobItemStatus {
|
|
1324
1529
|
FAILED = "FAILED",
|
|
1325
1530
|
FINISHED = "FINISHED",
|
|
@@ -1327,6 +1532,7 @@ export declare enum ReadSetExportJobItemStatus {
|
|
|
1327
1532
|
NOT_STARTED = "NOT_STARTED"
|
|
1328
1533
|
}
|
|
1329
1534
|
/**
|
|
1535
|
+
* @public
|
|
1330
1536
|
* <p>Details about a read set.</p>
|
|
1331
1537
|
*/
|
|
1332
1538
|
export interface ExportReadSetDetail {
|
|
@@ -1343,6 +1549,9 @@ export interface ExportReadSetDetail {
|
|
|
1343
1549
|
*/
|
|
1344
1550
|
statusMessage?: string;
|
|
1345
1551
|
}
|
|
1552
|
+
/**
|
|
1553
|
+
* @public
|
|
1554
|
+
*/
|
|
1346
1555
|
export declare enum ReadSetExportJobStatus {
|
|
1347
1556
|
CANCELLED = "CANCELLED",
|
|
1348
1557
|
CANCELLING = "CANCELLING",
|
|
@@ -1353,6 +1562,7 @@ export declare enum ReadSetExportJobStatus {
|
|
|
1353
1562
|
SUBMITTED = "SUBMITTED"
|
|
1354
1563
|
}
|
|
1355
1564
|
/**
|
|
1565
|
+
* @public
|
|
1356
1566
|
* <p>An read set export job filter.</p>
|
|
1357
1567
|
*/
|
|
1358
1568
|
export interface ExportReadSetFilter {
|
|
@@ -1370,6 +1580,7 @@ export interface ExportReadSetFilter {
|
|
|
1370
1580
|
createdBefore?: Date;
|
|
1371
1581
|
}
|
|
1372
1582
|
/**
|
|
1583
|
+
* @public
|
|
1373
1584
|
* <p>Details about a read set export job.</p>
|
|
1374
1585
|
*/
|
|
1375
1586
|
export interface ExportReadSetJobDetail {
|
|
@@ -1399,6 +1610,7 @@ export interface ExportReadSetJobDetail {
|
|
|
1399
1610
|
completionTime?: Date;
|
|
1400
1611
|
}
|
|
1401
1612
|
/**
|
|
1613
|
+
* @public
|
|
1402
1614
|
* <p>Details about a file.</p>
|
|
1403
1615
|
*/
|
|
1404
1616
|
export interface FileInformation {
|
|
@@ -1415,16 +1627,25 @@ export interface FileInformation {
|
|
|
1415
1627
|
*/
|
|
1416
1628
|
contentLength?: number;
|
|
1417
1629
|
}
|
|
1630
|
+
/**
|
|
1631
|
+
* @public
|
|
1632
|
+
*/
|
|
1418
1633
|
export declare enum FileType {
|
|
1419
1634
|
BAM = "BAM",
|
|
1420
1635
|
CRAM = "CRAM",
|
|
1421
1636
|
FASTQ = "FASTQ"
|
|
1422
1637
|
}
|
|
1638
|
+
/**
|
|
1639
|
+
* @public
|
|
1640
|
+
*/
|
|
1423
1641
|
export declare enum ReadSetFile {
|
|
1424
1642
|
INDEX = "INDEX",
|
|
1425
1643
|
SOURCE1 = "SOURCE1",
|
|
1426
1644
|
SOURCE2 = "SOURCE2"
|
|
1427
1645
|
}
|
|
1646
|
+
/**
|
|
1647
|
+
* @public
|
|
1648
|
+
*/
|
|
1428
1649
|
export interface GetReadSetRequest {
|
|
1429
1650
|
/**
|
|
1430
1651
|
* <p>The read set's ID.</p>
|
|
@@ -1443,6 +1664,9 @@ export interface GetReadSetRequest {
|
|
|
1443
1664
|
*/
|
|
1444
1665
|
partNumber: number | undefined;
|
|
1445
1666
|
}
|
|
1667
|
+
/**
|
|
1668
|
+
* @public
|
|
1669
|
+
*/
|
|
1446
1670
|
export interface GetReadSetResponse {
|
|
1447
1671
|
/**
|
|
1448
1672
|
* <p>The read set file payload.</p>
|
|
@@ -1450,6 +1674,7 @@ export interface GetReadSetResponse {
|
|
|
1450
1674
|
payload?: Readable | ReadableStream | Blob;
|
|
1451
1675
|
}
|
|
1452
1676
|
/**
|
|
1677
|
+
* @public
|
|
1453
1678
|
* <p>The ranges specified in the request are not valid.</p>
|
|
1454
1679
|
*/
|
|
1455
1680
|
export declare class RangeNotSatisfiableException extends __BaseException {
|
|
@@ -1461,6 +1686,9 @@ export declare class RangeNotSatisfiableException extends __BaseException {
|
|
|
1461
1686
|
*/
|
|
1462
1687
|
constructor(opts: __ExceptionOptionType<RangeNotSatisfiableException, __BaseException>);
|
|
1463
1688
|
}
|
|
1689
|
+
/**
|
|
1690
|
+
* @public
|
|
1691
|
+
*/
|
|
1464
1692
|
export interface GetReadSetActivationJobRequest {
|
|
1465
1693
|
/**
|
|
1466
1694
|
* <p>The job's ID.</p>
|
|
@@ -1471,6 +1699,9 @@ export interface GetReadSetActivationJobRequest {
|
|
|
1471
1699
|
*/
|
|
1472
1700
|
sequenceStoreId: string | undefined;
|
|
1473
1701
|
}
|
|
1702
|
+
/**
|
|
1703
|
+
* @public
|
|
1704
|
+
*/
|
|
1474
1705
|
export interface GetReadSetActivationJobResponse {
|
|
1475
1706
|
/**
|
|
1476
1707
|
* <p>The job's ID.</p>
|
|
@@ -1501,6 +1732,9 @@ export interface GetReadSetActivationJobResponse {
|
|
|
1501
1732
|
*/
|
|
1502
1733
|
sources?: ActivateReadSetSourceItem[];
|
|
1503
1734
|
}
|
|
1735
|
+
/**
|
|
1736
|
+
* @public
|
|
1737
|
+
*/
|
|
1504
1738
|
export interface GetReadSetExportJobRequest {
|
|
1505
1739
|
/**
|
|
1506
1740
|
* <p>The job's sequence store ID.</p>
|
|
@@ -1511,6 +1745,9 @@ export interface GetReadSetExportJobRequest {
|
|
|
1511
1745
|
*/
|
|
1512
1746
|
id: string | undefined;
|
|
1513
1747
|
}
|
|
1748
|
+
/**
|
|
1749
|
+
* @public
|
|
1750
|
+
*/
|
|
1514
1751
|
export interface GetReadSetExportJobResponse {
|
|
1515
1752
|
/**
|
|
1516
1753
|
* <p>The job's ID.</p>
|
|
@@ -1545,6 +1782,9 @@ export interface GetReadSetExportJobResponse {
|
|
|
1545
1782
|
*/
|
|
1546
1783
|
readSets?: ExportReadSetDetail[];
|
|
1547
1784
|
}
|
|
1785
|
+
/**
|
|
1786
|
+
* @public
|
|
1787
|
+
*/
|
|
1548
1788
|
export interface GetReadSetImportJobRequest {
|
|
1549
1789
|
/**
|
|
1550
1790
|
* <p>The job's ID.</p>
|
|
@@ -1556,6 +1796,7 @@ export interface GetReadSetImportJobRequest {
|
|
|
1556
1796
|
sequenceStoreId: string | undefined;
|
|
1557
1797
|
}
|
|
1558
1798
|
/**
|
|
1799
|
+
* @public
|
|
1559
1800
|
* <p>Source files for a sequence.</p>
|
|
1560
1801
|
*/
|
|
1561
1802
|
export interface SourceFiles {
|
|
@@ -1568,6 +1809,9 @@ export interface SourceFiles {
|
|
|
1568
1809
|
*/
|
|
1569
1810
|
source2?: string;
|
|
1570
1811
|
}
|
|
1812
|
+
/**
|
|
1813
|
+
* @public
|
|
1814
|
+
*/
|
|
1571
1815
|
export declare enum ReadSetImportJobItemStatus {
|
|
1572
1816
|
FAILED = "FAILED",
|
|
1573
1817
|
FINISHED = "FINISHED",
|
|
@@ -1575,6 +1819,7 @@ export declare enum ReadSetImportJobItemStatus {
|
|
|
1575
1819
|
NOT_STARTED = "NOT_STARTED"
|
|
1576
1820
|
}
|
|
1577
1821
|
/**
|
|
1822
|
+
* @public
|
|
1578
1823
|
* <p>A source for an import read set job.</p>
|
|
1579
1824
|
*/
|
|
1580
1825
|
export interface ImportReadSetSourceItem {
|
|
@@ -1623,6 +1868,9 @@ export interface ImportReadSetSourceItem {
|
|
|
1623
1868
|
*/
|
|
1624
1869
|
tags?: Record<string, string>;
|
|
1625
1870
|
}
|
|
1871
|
+
/**
|
|
1872
|
+
* @public
|
|
1873
|
+
*/
|
|
1626
1874
|
export declare enum ReadSetImportJobStatus {
|
|
1627
1875
|
CANCELLED = "CANCELLED",
|
|
1628
1876
|
CANCELLING = "CANCELLING",
|
|
@@ -1632,6 +1880,9 @@ export declare enum ReadSetImportJobStatus {
|
|
|
1632
1880
|
IN_PROGRESS = "IN_PROGRESS",
|
|
1633
1881
|
SUBMITTED = "SUBMITTED"
|
|
1634
1882
|
}
|
|
1883
|
+
/**
|
|
1884
|
+
* @public
|
|
1885
|
+
*/
|
|
1635
1886
|
export interface GetReadSetImportJobResponse {
|
|
1636
1887
|
/**
|
|
1637
1888
|
* <p>The job's ID.</p>
|
|
@@ -1666,6 +1917,9 @@ export interface GetReadSetImportJobResponse {
|
|
|
1666
1917
|
*/
|
|
1667
1918
|
sources: ImportReadSetSourceItem[] | undefined;
|
|
1668
1919
|
}
|
|
1920
|
+
/**
|
|
1921
|
+
* @public
|
|
1922
|
+
*/
|
|
1669
1923
|
export interface GetReadSetMetadataRequest {
|
|
1670
1924
|
/**
|
|
1671
1925
|
* <p>The read set's ID.</p>
|
|
@@ -1677,6 +1931,7 @@ export interface GetReadSetMetadataRequest {
|
|
|
1677
1931
|
sequenceStoreId: string | undefined;
|
|
1678
1932
|
}
|
|
1679
1933
|
/**
|
|
1934
|
+
* @public
|
|
1680
1935
|
* <p>Files in a read set.</p>
|
|
1681
1936
|
*/
|
|
1682
1937
|
export interface ReadSetFiles {
|
|
@@ -1694,6 +1949,7 @@ export interface ReadSetFiles {
|
|
|
1694
1949
|
index?: FileInformation;
|
|
1695
1950
|
}
|
|
1696
1951
|
/**
|
|
1952
|
+
* @public
|
|
1697
1953
|
* <p>Details about a sequence.</p>
|
|
1698
1954
|
*/
|
|
1699
1955
|
export interface SequenceInformation {
|
|
@@ -1714,6 +1970,9 @@ export interface SequenceInformation {
|
|
|
1714
1970
|
*/
|
|
1715
1971
|
alignment?: string;
|
|
1716
1972
|
}
|
|
1973
|
+
/**
|
|
1974
|
+
* @public
|
|
1975
|
+
*/
|
|
1717
1976
|
export declare enum ReadSetStatus {
|
|
1718
1977
|
ACTIVATING = "ACTIVATING",
|
|
1719
1978
|
ACTIVE = "ACTIVE",
|
|
@@ -1721,6 +1980,9 @@ export declare enum ReadSetStatus {
|
|
|
1721
1980
|
DELETED = "DELETED",
|
|
1722
1981
|
DELETING = "DELETING"
|
|
1723
1982
|
}
|
|
1983
|
+
/**
|
|
1984
|
+
* @public
|
|
1985
|
+
*/
|
|
1724
1986
|
export interface GetReadSetMetadataResponse {
|
|
1725
1987
|
/**
|
|
1726
1988
|
* <p>The read set's ID.</p>
|
|
@@ -1775,10 +2037,16 @@ export interface GetReadSetMetadataResponse {
|
|
|
1775
2037
|
*/
|
|
1776
2038
|
files?: ReadSetFiles;
|
|
1777
2039
|
}
|
|
2040
|
+
/**
|
|
2041
|
+
* @public
|
|
2042
|
+
*/
|
|
1778
2043
|
export declare enum ReferenceFile {
|
|
1779
2044
|
INDEX = "INDEX",
|
|
1780
2045
|
SOURCE = "SOURCE"
|
|
1781
2046
|
}
|
|
2047
|
+
/**
|
|
2048
|
+
* @public
|
|
2049
|
+
*/
|
|
1782
2050
|
export interface GetReferenceRequest {
|
|
1783
2051
|
/**
|
|
1784
2052
|
* <p>The reference's ID.</p>
|
|
@@ -1801,12 +2069,18 @@ export interface GetReferenceRequest {
|
|
|
1801
2069
|
*/
|
|
1802
2070
|
file?: ReferenceFile | string;
|
|
1803
2071
|
}
|
|
2072
|
+
/**
|
|
2073
|
+
* @public
|
|
2074
|
+
*/
|
|
1804
2075
|
export interface GetReferenceResponse {
|
|
1805
2076
|
/**
|
|
1806
2077
|
* <p>The reference file payload.</p>
|
|
1807
2078
|
*/
|
|
1808
2079
|
payload?: Readable | ReadableStream | Blob;
|
|
1809
2080
|
}
|
|
2081
|
+
/**
|
|
2082
|
+
* @public
|
|
2083
|
+
*/
|
|
1810
2084
|
export interface GetReferenceImportJobRequest {
|
|
1811
2085
|
/**
|
|
1812
2086
|
* <p>The job's ID.</p>
|
|
@@ -1817,6 +2091,9 @@ export interface GetReferenceImportJobRequest {
|
|
|
1817
2091
|
*/
|
|
1818
2092
|
referenceStoreId: string | undefined;
|
|
1819
2093
|
}
|
|
2094
|
+
/**
|
|
2095
|
+
* @public
|
|
2096
|
+
*/
|
|
1820
2097
|
export declare enum ReferenceImportJobItemStatus {
|
|
1821
2098
|
FAILED = "FAILED",
|
|
1822
2099
|
FINISHED = "FINISHED",
|
|
@@ -1824,6 +2101,7 @@ export declare enum ReferenceImportJobItemStatus {
|
|
|
1824
2101
|
NOT_STARTED = "NOT_STARTED"
|
|
1825
2102
|
}
|
|
1826
2103
|
/**
|
|
2104
|
+
* @public
|
|
1827
2105
|
* <p>An genome reference source.</p>
|
|
1828
2106
|
*/
|
|
1829
2107
|
export interface ImportReferenceSourceItem {
|
|
@@ -1852,6 +2130,9 @@ export interface ImportReferenceSourceItem {
|
|
|
1852
2130
|
*/
|
|
1853
2131
|
tags?: Record<string, string>;
|
|
1854
2132
|
}
|
|
2133
|
+
/**
|
|
2134
|
+
* @public
|
|
2135
|
+
*/
|
|
1855
2136
|
export declare enum ReferenceImportJobStatus {
|
|
1856
2137
|
CANCELLED = "CANCELLED",
|
|
1857
2138
|
CANCELLING = "CANCELLING",
|
|
@@ -1861,6 +2142,9 @@ export declare enum ReferenceImportJobStatus {
|
|
|
1861
2142
|
IN_PROGRESS = "IN_PROGRESS",
|
|
1862
2143
|
SUBMITTED = "SUBMITTED"
|
|
1863
2144
|
}
|
|
2145
|
+
/**
|
|
2146
|
+
* @public
|
|
2147
|
+
*/
|
|
1864
2148
|
export interface GetReferenceImportJobResponse {
|
|
1865
2149
|
/**
|
|
1866
2150
|
* <p>The job's ID.</p>
|
|
@@ -1895,6 +2179,9 @@ export interface GetReferenceImportJobResponse {
|
|
|
1895
2179
|
*/
|
|
1896
2180
|
sources: ImportReferenceSourceItem[] | undefined;
|
|
1897
2181
|
}
|
|
2182
|
+
/**
|
|
2183
|
+
* @public
|
|
2184
|
+
*/
|
|
1898
2185
|
export interface GetReferenceMetadataRequest {
|
|
1899
2186
|
/**
|
|
1900
2187
|
* <p>The reference's ID.</p>
|
|
@@ -1906,6 +2193,7 @@ export interface GetReferenceMetadataRequest {
|
|
|
1906
2193
|
referenceStoreId: string | undefined;
|
|
1907
2194
|
}
|
|
1908
2195
|
/**
|
|
2196
|
+
* @public
|
|
1909
2197
|
* <p>A set of genome reference files.</p>
|
|
1910
2198
|
*/
|
|
1911
2199
|
export interface ReferenceFiles {
|
|
@@ -1918,11 +2206,17 @@ export interface ReferenceFiles {
|
|
|
1918
2206
|
*/
|
|
1919
2207
|
index?: FileInformation;
|
|
1920
2208
|
}
|
|
2209
|
+
/**
|
|
2210
|
+
* @public
|
|
2211
|
+
*/
|
|
1921
2212
|
export declare enum ReferenceStatus {
|
|
1922
2213
|
ACTIVE = "ACTIVE",
|
|
1923
2214
|
DELETED = "DELETED",
|
|
1924
2215
|
DELETING = "DELETING"
|
|
1925
2216
|
}
|
|
2217
|
+
/**
|
|
2218
|
+
* @public
|
|
2219
|
+
*/
|
|
1926
2220
|
export interface GetReferenceMetadataResponse {
|
|
1927
2221
|
/**
|
|
1928
2222
|
* <p>The reference's ID.</p>
|
|
@@ -1965,12 +2259,18 @@ export interface GetReferenceMetadataResponse {
|
|
|
1965
2259
|
*/
|
|
1966
2260
|
files?: ReferenceFiles;
|
|
1967
2261
|
}
|
|
2262
|
+
/**
|
|
2263
|
+
* @public
|
|
2264
|
+
*/
|
|
1968
2265
|
export interface GetReferenceStoreRequest {
|
|
1969
2266
|
/**
|
|
1970
2267
|
* <p>The store's ID.</p>
|
|
1971
2268
|
*/
|
|
1972
2269
|
id: string | undefined;
|
|
1973
2270
|
}
|
|
2271
|
+
/**
|
|
2272
|
+
* @public
|
|
2273
|
+
*/
|
|
1974
2274
|
export interface GetReferenceStoreResponse {
|
|
1975
2275
|
/**
|
|
1976
2276
|
* <p>The store's ID.</p>
|
|
@@ -1997,9 +2297,15 @@ export interface GetReferenceStoreResponse {
|
|
|
1997
2297
|
*/
|
|
1998
2298
|
creationTime: Date | undefined;
|
|
1999
2299
|
}
|
|
2300
|
+
/**
|
|
2301
|
+
* @public
|
|
2302
|
+
*/
|
|
2000
2303
|
export declare enum RunExport {
|
|
2001
2304
|
DEFINITION = "DEFINITION"
|
|
2002
2305
|
}
|
|
2306
|
+
/**
|
|
2307
|
+
* @public
|
|
2308
|
+
*/
|
|
2003
2309
|
export interface GetRunRequest {
|
|
2004
2310
|
/**
|
|
2005
2311
|
* <p>The run's ID.</p>
|
|
@@ -2010,12 +2316,18 @@ export interface GetRunRequest {
|
|
|
2010
2316
|
*/
|
|
2011
2317
|
export?: (RunExport | string)[];
|
|
2012
2318
|
}
|
|
2319
|
+
/**
|
|
2320
|
+
* @public
|
|
2321
|
+
*/
|
|
2013
2322
|
export declare enum RunLogLevel {
|
|
2014
2323
|
ALL = "ALL",
|
|
2015
2324
|
ERROR = "ERROR",
|
|
2016
2325
|
FATAL = "FATAL",
|
|
2017
2326
|
OFF = "OFF"
|
|
2018
2327
|
}
|
|
2328
|
+
/**
|
|
2329
|
+
* @public
|
|
2330
|
+
*/
|
|
2019
2331
|
export declare enum RunStatus {
|
|
2020
2332
|
CANCELLED = "CANCELLED",
|
|
2021
2333
|
COMPLETED = "COMPLETED",
|
|
@@ -2026,10 +2338,16 @@ export declare enum RunStatus {
|
|
|
2026
2338
|
STARTING = "STARTING",
|
|
2027
2339
|
STOPPING = "STOPPING"
|
|
2028
2340
|
}
|
|
2341
|
+
/**
|
|
2342
|
+
* @public
|
|
2343
|
+
*/
|
|
2029
2344
|
export declare enum WorkflowType {
|
|
2030
2345
|
PRIVATE = "PRIVATE",
|
|
2031
2346
|
SERVICE = "SERVICE"
|
|
2032
2347
|
}
|
|
2348
|
+
/**
|
|
2349
|
+
* @public
|
|
2350
|
+
*/
|
|
2033
2351
|
export interface GetRunResponse {
|
|
2034
2352
|
/**
|
|
2035
2353
|
* <p>The run's ARN.</p>
|
|
@@ -2124,12 +2442,18 @@ export interface GetRunResponse {
|
|
|
2124
2442
|
*/
|
|
2125
2443
|
tags?: Record<string, string>;
|
|
2126
2444
|
}
|
|
2445
|
+
/**
|
|
2446
|
+
* @public
|
|
2447
|
+
*/
|
|
2127
2448
|
export interface GetRunGroupRequest {
|
|
2128
2449
|
/**
|
|
2129
2450
|
* <p>The group's ID.</p>
|
|
2130
2451
|
*/
|
|
2131
2452
|
id: string | undefined;
|
|
2132
2453
|
}
|
|
2454
|
+
/**
|
|
2455
|
+
* @public
|
|
2456
|
+
*/
|
|
2133
2457
|
export interface GetRunGroupResponse {
|
|
2134
2458
|
/**
|
|
2135
2459
|
* <p>The group's ARN.</p>
|
|
@@ -2164,6 +2488,9 @@ export interface GetRunGroupResponse {
|
|
|
2164
2488
|
*/
|
|
2165
2489
|
tags?: Record<string, string>;
|
|
2166
2490
|
}
|
|
2491
|
+
/**
|
|
2492
|
+
* @public
|
|
2493
|
+
*/
|
|
2167
2494
|
export interface GetRunTaskRequest {
|
|
2168
2495
|
/**
|
|
2169
2496
|
* <p>The task's ID.</p>
|
|
@@ -2174,6 +2501,9 @@ export interface GetRunTaskRequest {
|
|
|
2174
2501
|
*/
|
|
2175
2502
|
taskId: string | undefined;
|
|
2176
2503
|
}
|
|
2504
|
+
/**
|
|
2505
|
+
* @public
|
|
2506
|
+
*/
|
|
2177
2507
|
export declare enum TaskStatus {
|
|
2178
2508
|
CANCELLED = "CANCELLED",
|
|
2179
2509
|
COMPLETED = "COMPLETED",
|
|
@@ -2183,6 +2513,9 @@ export declare enum TaskStatus {
|
|
|
2183
2513
|
STARTING = "STARTING",
|
|
2184
2514
|
STOPPING = "STOPPING"
|
|
2185
2515
|
}
|
|
2516
|
+
/**
|
|
2517
|
+
* @public
|
|
2518
|
+
*/
|
|
2186
2519
|
export interface GetRunTaskResponse {
|
|
2187
2520
|
/**
|
|
2188
2521
|
* <p>The task's ID.</p>
|
|
@@ -2225,12 +2558,18 @@ export interface GetRunTaskResponse {
|
|
|
2225
2558
|
*/
|
|
2226
2559
|
logStream?: string;
|
|
2227
2560
|
}
|
|
2561
|
+
/**
|
|
2562
|
+
* @public
|
|
2563
|
+
*/
|
|
2228
2564
|
export interface GetSequenceStoreRequest {
|
|
2229
2565
|
/**
|
|
2230
2566
|
* <p>The store's ID.</p>
|
|
2231
2567
|
*/
|
|
2232
2568
|
id: string | undefined;
|
|
2233
2569
|
}
|
|
2570
|
+
/**
|
|
2571
|
+
* @public
|
|
2572
|
+
*/
|
|
2234
2573
|
export interface GetSequenceStoreResponse {
|
|
2235
2574
|
/**
|
|
2236
2575
|
* <p>The store's ID.</p>
|
|
@@ -2257,6 +2596,9 @@ export interface GetSequenceStoreResponse {
|
|
|
2257
2596
|
*/
|
|
2258
2597
|
creationTime: Date | undefined;
|
|
2259
2598
|
}
|
|
2599
|
+
/**
|
|
2600
|
+
* @public
|
|
2601
|
+
*/
|
|
2260
2602
|
export interface GetVariantImportRequest {
|
|
2261
2603
|
/**
|
|
2262
2604
|
* <p>The job's ID.</p>
|
|
@@ -2264,6 +2606,7 @@ export interface GetVariantImportRequest {
|
|
|
2264
2606
|
jobId: string | undefined;
|
|
2265
2607
|
}
|
|
2266
2608
|
/**
|
|
2609
|
+
* @public
|
|
2267
2610
|
* <p>Details about an imported variant item.</p>
|
|
2268
2611
|
*/
|
|
2269
2612
|
export interface VariantImportItemDetail {
|
|
@@ -2280,6 +2623,9 @@ export interface VariantImportItemDetail {
|
|
|
2280
2623
|
*/
|
|
2281
2624
|
statusMessage?: string;
|
|
2282
2625
|
}
|
|
2626
|
+
/**
|
|
2627
|
+
* @public
|
|
2628
|
+
*/
|
|
2283
2629
|
export interface GetVariantImportResponse {
|
|
2284
2630
|
/**
|
|
2285
2631
|
* <p>The job's ID.</p>
|
|
@@ -2322,12 +2668,18 @@ export interface GetVariantImportResponse {
|
|
|
2322
2668
|
*/
|
|
2323
2669
|
runLeftNormalization: boolean | undefined;
|
|
2324
2670
|
}
|
|
2671
|
+
/**
|
|
2672
|
+
* @public
|
|
2673
|
+
*/
|
|
2325
2674
|
export interface GetVariantStoreRequest {
|
|
2326
2675
|
/**
|
|
2327
2676
|
* <p>The store's name.</p>
|
|
2328
2677
|
*/
|
|
2329
2678
|
name: string | undefined;
|
|
2330
2679
|
}
|
|
2680
|
+
/**
|
|
2681
|
+
* @public
|
|
2682
|
+
*/
|
|
2331
2683
|
export interface GetVariantStoreResponse {
|
|
2332
2684
|
/**
|
|
2333
2685
|
* <p>The store's ID.</p>
|
|
@@ -2378,9 +2730,15 @@ export interface GetVariantStoreResponse {
|
|
|
2378
2730
|
*/
|
|
2379
2731
|
storeSizeBytes: number | undefined;
|
|
2380
2732
|
}
|
|
2733
|
+
/**
|
|
2734
|
+
* @public
|
|
2735
|
+
*/
|
|
2381
2736
|
export declare enum WorkflowExport {
|
|
2382
2737
|
DEFINITION = "DEFINITION"
|
|
2383
2738
|
}
|
|
2739
|
+
/**
|
|
2740
|
+
* @public
|
|
2741
|
+
*/
|
|
2384
2742
|
export interface GetWorkflowRequest {
|
|
2385
2743
|
/**
|
|
2386
2744
|
* <p>The workflow's ID.</p>
|
|
@@ -2395,6 +2753,9 @@ export interface GetWorkflowRequest {
|
|
|
2395
2753
|
*/
|
|
2396
2754
|
export?: (WorkflowExport | string)[];
|
|
2397
2755
|
}
|
|
2756
|
+
/**
|
|
2757
|
+
* @public
|
|
2758
|
+
*/
|
|
2398
2759
|
export interface GetWorkflowResponse {
|
|
2399
2760
|
/**
|
|
2400
2761
|
* <p>The workflow's ARN.</p>
|
|
@@ -2458,6 +2819,7 @@ export interface GetWorkflowResponse {
|
|
|
2458
2819
|
tags?: Record<string, string>;
|
|
2459
2820
|
}
|
|
2460
2821
|
/**
|
|
2822
|
+
* @public
|
|
2461
2823
|
* <p>A filter for import read set jobs.</p>
|
|
2462
2824
|
*/
|
|
2463
2825
|
export interface ImportReadSetFilter {
|
|
@@ -2475,6 +2837,7 @@ export interface ImportReadSetFilter {
|
|
|
2475
2837
|
createdBefore?: Date;
|
|
2476
2838
|
}
|
|
2477
2839
|
/**
|
|
2840
|
+
* @public
|
|
2478
2841
|
* <p>An import read set job.</p>
|
|
2479
2842
|
*/
|
|
2480
2843
|
export interface ImportReadSetJobItem {
|
|
@@ -2504,6 +2867,7 @@ export interface ImportReadSetJobItem {
|
|
|
2504
2867
|
completionTime?: Date;
|
|
2505
2868
|
}
|
|
2506
2869
|
/**
|
|
2870
|
+
* @public
|
|
2507
2871
|
* <p>A filter for import references.</p>
|
|
2508
2872
|
*/
|
|
2509
2873
|
export interface ImportReferenceFilter {
|
|
@@ -2521,6 +2885,7 @@ export interface ImportReferenceFilter {
|
|
|
2521
2885
|
createdBefore?: Date;
|
|
2522
2886
|
}
|
|
2523
2887
|
/**
|
|
2888
|
+
* @public
|
|
2524
2889
|
* <p>An import reference job.</p>
|
|
2525
2890
|
*/
|
|
2526
2891
|
export interface ImportReferenceJobItem {
|
|
@@ -2549,6 +2914,9 @@ export interface ImportReferenceJobItem {
|
|
|
2549
2914
|
*/
|
|
2550
2915
|
completionTime?: Date;
|
|
2551
2916
|
}
|
|
2917
|
+
/**
|
|
2918
|
+
* @public
|
|
2919
|
+
*/
|
|
2552
2920
|
export interface ListReadSetActivationJobsRequest {
|
|
2553
2921
|
/**
|
|
2554
2922
|
* <p>The read set's sequence store ID.</p>
|
|
@@ -2567,6 +2935,9 @@ export interface ListReadSetActivationJobsRequest {
|
|
|
2567
2935
|
*/
|
|
2568
2936
|
filter?: ActivateReadSetFilter;
|
|
2569
2937
|
}
|
|
2938
|
+
/**
|
|
2939
|
+
* @public
|
|
2940
|
+
*/
|
|
2570
2941
|
export interface ListReadSetActivationJobsResponse {
|
|
2571
2942
|
/**
|
|
2572
2943
|
* <p>A pagination token that's included if more results are available.</p>
|
|
@@ -2577,6 +2948,9 @@ export interface ListReadSetActivationJobsResponse {
|
|
|
2577
2948
|
*/
|
|
2578
2949
|
activationJobs?: ActivateReadSetJobItem[];
|
|
2579
2950
|
}
|
|
2951
|
+
/**
|
|
2952
|
+
* @public
|
|
2953
|
+
*/
|
|
2580
2954
|
export interface ListReadSetExportJobsRequest {
|
|
2581
2955
|
/**
|
|
2582
2956
|
* <p>The jobs' sequence store ID.</p>
|
|
@@ -2595,6 +2969,9 @@ export interface ListReadSetExportJobsRequest {
|
|
|
2595
2969
|
*/
|
|
2596
2970
|
filter?: ExportReadSetFilter;
|
|
2597
2971
|
}
|
|
2972
|
+
/**
|
|
2973
|
+
* @public
|
|
2974
|
+
*/
|
|
2598
2975
|
export interface ListReadSetExportJobsResponse {
|
|
2599
2976
|
/**
|
|
2600
2977
|
* <p>A pagination token that's included if more results are available.</p>
|
|
@@ -2605,6 +2982,9 @@ export interface ListReadSetExportJobsResponse {
|
|
|
2605
2982
|
*/
|
|
2606
2983
|
exportJobs?: ExportReadSetJobDetail[];
|
|
2607
2984
|
}
|
|
2985
|
+
/**
|
|
2986
|
+
* @public
|
|
2987
|
+
*/
|
|
2608
2988
|
export interface ListReadSetImportJobsRequest {
|
|
2609
2989
|
/**
|
|
2610
2990
|
* <p>The maximum number of jobs to return in one page of results.</p>
|
|
@@ -2623,6 +3003,9 @@ export interface ListReadSetImportJobsRequest {
|
|
|
2623
3003
|
*/
|
|
2624
3004
|
filter?: ImportReadSetFilter;
|
|
2625
3005
|
}
|
|
3006
|
+
/**
|
|
3007
|
+
* @public
|
|
3008
|
+
*/
|
|
2626
3009
|
export interface ListReadSetImportJobsResponse {
|
|
2627
3010
|
/**
|
|
2628
3011
|
* <p>A pagination token that's included if more results are available.</p>
|
|
@@ -2634,6 +3017,7 @@ export interface ListReadSetImportJobsResponse {
|
|
|
2634
3017
|
importJobs?: ImportReadSetJobItem[];
|
|
2635
3018
|
}
|
|
2636
3019
|
/**
|
|
3020
|
+
* @public
|
|
2637
3021
|
* <p>A filter for read sets.</p>
|
|
2638
3022
|
*/
|
|
2639
3023
|
export interface ReadSetFilter {
|
|
@@ -2658,6 +3042,9 @@ export interface ReadSetFilter {
|
|
|
2658
3042
|
*/
|
|
2659
3043
|
createdBefore?: Date;
|
|
2660
3044
|
}
|
|
3045
|
+
/**
|
|
3046
|
+
* @public
|
|
3047
|
+
*/
|
|
2661
3048
|
export interface ListReadSetsRequest {
|
|
2662
3049
|
/**
|
|
2663
3050
|
* <p>The jobs' sequence store ID.</p>
|
|
@@ -2677,6 +3064,7 @@ export interface ListReadSetsRequest {
|
|
|
2677
3064
|
filter?: ReadSetFilter;
|
|
2678
3065
|
}
|
|
2679
3066
|
/**
|
|
3067
|
+
* @public
|
|
2680
3068
|
* <p>A read set.</p>
|
|
2681
3069
|
*/
|
|
2682
3070
|
export interface ReadSetListItem {
|
|
@@ -2729,6 +3117,9 @@ export interface ReadSetListItem {
|
|
|
2729
3117
|
*/
|
|
2730
3118
|
creationTime: Date | undefined;
|
|
2731
3119
|
}
|
|
3120
|
+
/**
|
|
3121
|
+
* @public
|
|
3122
|
+
*/
|
|
2732
3123
|
export interface ListReadSetsResponse {
|
|
2733
3124
|
/**
|
|
2734
3125
|
* <p>A pagination token that's included if more results are available.</p>
|
|
@@ -2739,6 +3130,9 @@ export interface ListReadSetsResponse {
|
|
|
2739
3130
|
*/
|
|
2740
3131
|
readSets: ReadSetListItem[] | undefined;
|
|
2741
3132
|
}
|
|
3133
|
+
/**
|
|
3134
|
+
* @public
|
|
3135
|
+
*/
|
|
2742
3136
|
export interface ListReferenceImportJobsRequest {
|
|
2743
3137
|
/**
|
|
2744
3138
|
* <p>The maximum number of jobs to return in one page of results.</p>
|
|
@@ -2757,6 +3151,9 @@ export interface ListReferenceImportJobsRequest {
|
|
|
2757
3151
|
*/
|
|
2758
3152
|
filter?: ImportReferenceFilter;
|
|
2759
3153
|
}
|
|
3154
|
+
/**
|
|
3155
|
+
* @public
|
|
3156
|
+
*/
|
|
2760
3157
|
export interface ListReferenceImportJobsResponse {
|
|
2761
3158
|
/**
|
|
2762
3159
|
* <p>A pagination token that's included if more results are available.</p>
|
|
@@ -2768,6 +3165,7 @@ export interface ListReferenceImportJobsResponse {
|
|
|
2768
3165
|
importJobs?: ImportReferenceJobItem[];
|
|
2769
3166
|
}
|
|
2770
3167
|
/**
|
|
3168
|
+
* @public
|
|
2771
3169
|
* <p>A filter for references.</p>
|
|
2772
3170
|
*/
|
|
2773
3171
|
export interface ReferenceFilter {
|
|
@@ -2788,6 +3186,9 @@ export interface ReferenceFilter {
|
|
|
2788
3186
|
*/
|
|
2789
3187
|
createdBefore?: Date;
|
|
2790
3188
|
}
|
|
3189
|
+
/**
|
|
3190
|
+
* @public
|
|
3191
|
+
*/
|
|
2791
3192
|
export interface ListReferencesRequest {
|
|
2792
3193
|
/**
|
|
2793
3194
|
* <p>The references' reference store ID.</p>
|
|
@@ -2807,6 +3208,7 @@ export interface ListReferencesRequest {
|
|
|
2807
3208
|
filter?: ReferenceFilter;
|
|
2808
3209
|
}
|
|
2809
3210
|
/**
|
|
3211
|
+
* @public
|
|
2810
3212
|
* <p>A genome reference.</p>
|
|
2811
3213
|
*/
|
|
2812
3214
|
export interface ReferenceListItem {
|
|
@@ -2847,6 +3249,9 @@ export interface ReferenceListItem {
|
|
|
2847
3249
|
*/
|
|
2848
3250
|
updateTime: Date | undefined;
|
|
2849
3251
|
}
|
|
3252
|
+
/**
|
|
3253
|
+
* @public
|
|
3254
|
+
*/
|
|
2850
3255
|
export interface ListReferencesResponse {
|
|
2851
3256
|
/**
|
|
2852
3257
|
* <p>A pagination token that's included if more results are available.</p>
|
|
@@ -2858,6 +3263,7 @@ export interface ListReferencesResponse {
|
|
|
2858
3263
|
references: ReferenceListItem[] | undefined;
|
|
2859
3264
|
}
|
|
2860
3265
|
/**
|
|
3266
|
+
* @public
|
|
2861
3267
|
* <p>A filter for reference stores.</p>
|
|
2862
3268
|
*/
|
|
2863
3269
|
export interface ReferenceStoreFilter {
|
|
@@ -2874,6 +3280,9 @@ export interface ReferenceStoreFilter {
|
|
|
2874
3280
|
*/
|
|
2875
3281
|
createdBefore?: Date;
|
|
2876
3282
|
}
|
|
3283
|
+
/**
|
|
3284
|
+
* @public
|
|
3285
|
+
*/
|
|
2877
3286
|
export interface ListReferenceStoresRequest {
|
|
2878
3287
|
/**
|
|
2879
3288
|
* <p>The maximum number of stores to return in one page of results.</p>
|
|
@@ -2889,6 +3298,7 @@ export interface ListReferenceStoresRequest {
|
|
|
2889
3298
|
filter?: ReferenceStoreFilter;
|
|
2890
3299
|
}
|
|
2891
3300
|
/**
|
|
3301
|
+
* @public
|
|
2892
3302
|
* <p>Details about a reference store.</p>
|
|
2893
3303
|
*/
|
|
2894
3304
|
export interface ReferenceStoreDetail {
|
|
@@ -2917,6 +3327,9 @@ export interface ReferenceStoreDetail {
|
|
|
2917
3327
|
*/
|
|
2918
3328
|
creationTime: Date | undefined;
|
|
2919
3329
|
}
|
|
3330
|
+
/**
|
|
3331
|
+
* @public
|
|
3332
|
+
*/
|
|
2920
3333
|
export interface ListReferenceStoresResponse {
|
|
2921
3334
|
/**
|
|
2922
3335
|
* <p>A pagination token that's included if more results are available.</p>
|
|
@@ -2927,6 +3340,9 @@ export interface ListReferenceStoresResponse {
|
|
|
2927
3340
|
*/
|
|
2928
3341
|
referenceStores: ReferenceStoreDetail[] | undefined;
|
|
2929
3342
|
}
|
|
3343
|
+
/**
|
|
3344
|
+
* @public
|
|
3345
|
+
*/
|
|
2930
3346
|
export interface ListRunGroupsRequest {
|
|
2931
3347
|
/**
|
|
2932
3348
|
* <p>The run groups' name.</p>
|
|
@@ -2942,6 +3358,7 @@ export interface ListRunGroupsRequest {
|
|
|
2942
3358
|
maxResults?: number;
|
|
2943
3359
|
}
|
|
2944
3360
|
/**
|
|
3361
|
+
* @public
|
|
2945
3362
|
* <p>A run group.</p>
|
|
2946
3363
|
*/
|
|
2947
3364
|
export interface RunGroupListItem {
|
|
@@ -2974,6 +3391,9 @@ export interface RunGroupListItem {
|
|
|
2974
3391
|
*/
|
|
2975
3392
|
creationTime?: Date;
|
|
2976
3393
|
}
|
|
3394
|
+
/**
|
|
3395
|
+
* @public
|
|
3396
|
+
*/
|
|
2977
3397
|
export interface ListRunGroupsResponse {
|
|
2978
3398
|
/**
|
|
2979
3399
|
* <p>A list of groups.</p>
|
|
@@ -2984,6 +3404,9 @@ export interface ListRunGroupsResponse {
|
|
|
2984
3404
|
*/
|
|
2985
3405
|
nextToken?: string;
|
|
2986
3406
|
}
|
|
3407
|
+
/**
|
|
3408
|
+
* @public
|
|
3409
|
+
*/
|
|
2987
3410
|
export interface ListRunsRequest {
|
|
2988
3411
|
/**
|
|
2989
3412
|
* <p>Filter the list by run name.</p>
|
|
@@ -3003,6 +3426,7 @@ export interface ListRunsRequest {
|
|
|
3003
3426
|
maxResults?: number;
|
|
3004
3427
|
}
|
|
3005
3428
|
/**
|
|
3429
|
+
* @public
|
|
3006
3430
|
* <p>A workflow run.</p>
|
|
3007
3431
|
*/
|
|
3008
3432
|
export interface RunListItem {
|
|
@@ -3047,6 +3471,9 @@ export interface RunListItem {
|
|
|
3047
3471
|
*/
|
|
3048
3472
|
stopTime?: Date;
|
|
3049
3473
|
}
|
|
3474
|
+
/**
|
|
3475
|
+
* @public
|
|
3476
|
+
*/
|
|
3050
3477
|
export interface ListRunsResponse {
|
|
3051
3478
|
/**
|
|
3052
3479
|
* <p>A list of runs.</p>
|
|
@@ -3057,6 +3484,9 @@ export interface ListRunsResponse {
|
|
|
3057
3484
|
*/
|
|
3058
3485
|
nextToken?: string;
|
|
3059
3486
|
}
|
|
3487
|
+
/**
|
|
3488
|
+
* @public
|
|
3489
|
+
*/
|
|
3060
3490
|
export interface ListRunTasksRequest {
|
|
3061
3491
|
/**
|
|
3062
3492
|
* <p>The run's ID.</p>
|
|
@@ -3076,6 +3506,7 @@ export interface ListRunTasksRequest {
|
|
|
3076
3506
|
maxResults?: number;
|
|
3077
3507
|
}
|
|
3078
3508
|
/**
|
|
3509
|
+
* @public
|
|
3079
3510
|
* <p>A workflow run task.</p>
|
|
3080
3511
|
*/
|
|
3081
3512
|
export interface TaskListItem {
|
|
@@ -3112,6 +3543,9 @@ export interface TaskListItem {
|
|
|
3112
3543
|
*/
|
|
3113
3544
|
stopTime?: Date;
|
|
3114
3545
|
}
|
|
3546
|
+
/**
|
|
3547
|
+
* @public
|
|
3548
|
+
*/
|
|
3115
3549
|
export interface ListRunTasksResponse {
|
|
3116
3550
|
/**
|
|
3117
3551
|
* <p>A list of tasks.</p>
|
|
@@ -3123,6 +3557,7 @@ export interface ListRunTasksResponse {
|
|
|
3123
3557
|
nextToken?: string;
|
|
3124
3558
|
}
|
|
3125
3559
|
/**
|
|
3560
|
+
* @public
|
|
3126
3561
|
* <p>A filter for a sequence store.</p>
|
|
3127
3562
|
*/
|
|
3128
3563
|
export interface SequenceStoreFilter {
|
|
@@ -3139,6 +3574,9 @@ export interface SequenceStoreFilter {
|
|
|
3139
3574
|
*/
|
|
3140
3575
|
createdBefore?: Date;
|
|
3141
3576
|
}
|
|
3577
|
+
/**
|
|
3578
|
+
* @public
|
|
3579
|
+
*/
|
|
3142
3580
|
export interface ListSequenceStoresRequest {
|
|
3143
3581
|
/**
|
|
3144
3582
|
* <p>The maximum number of stores to return in one page of results.</p>
|
|
@@ -3154,6 +3592,7 @@ export interface ListSequenceStoresRequest {
|
|
|
3154
3592
|
filter?: SequenceStoreFilter;
|
|
3155
3593
|
}
|
|
3156
3594
|
/**
|
|
3595
|
+
* @public
|
|
3157
3596
|
* <p>Details about a sequence store.</p>
|
|
3158
3597
|
*/
|
|
3159
3598
|
export interface SequenceStoreDetail {
|
|
@@ -3182,6 +3621,9 @@ export interface SequenceStoreDetail {
|
|
|
3182
3621
|
*/
|
|
3183
3622
|
creationTime: Date | undefined;
|
|
3184
3623
|
}
|
|
3624
|
+
/**
|
|
3625
|
+
* @public
|
|
3626
|
+
*/
|
|
3185
3627
|
export interface ListSequenceStoresResponse {
|
|
3186
3628
|
/**
|
|
3187
3629
|
* <p>A pagination token that's included if more results are available.</p>
|
|
@@ -3192,12 +3634,18 @@ export interface ListSequenceStoresResponse {
|
|
|
3192
3634
|
*/
|
|
3193
3635
|
sequenceStores: SequenceStoreDetail[] | undefined;
|
|
3194
3636
|
}
|
|
3637
|
+
/**
|
|
3638
|
+
* @public
|
|
3639
|
+
*/
|
|
3195
3640
|
export interface ListTagsForResourceRequest {
|
|
3196
3641
|
/**
|
|
3197
3642
|
* <p>The resource's ARN.</p>
|
|
3198
3643
|
*/
|
|
3199
3644
|
resourceArn: string | undefined;
|
|
3200
3645
|
}
|
|
3646
|
+
/**
|
|
3647
|
+
* @public
|
|
3648
|
+
*/
|
|
3201
3649
|
export interface ListTagsForResourceResponse {
|
|
3202
3650
|
/**
|
|
3203
3651
|
* <p>A list of tags.</p>
|
|
@@ -3205,6 +3653,7 @@ export interface ListTagsForResourceResponse {
|
|
|
3205
3653
|
tags: Record<string, string> | undefined;
|
|
3206
3654
|
}
|
|
3207
3655
|
/**
|
|
3656
|
+
* @public
|
|
3208
3657
|
* <p>A filter for variant import jobs.</p>
|
|
3209
3658
|
*/
|
|
3210
3659
|
export interface ListVariantImportJobsFilter {
|
|
@@ -3217,6 +3666,9 @@ export interface ListVariantImportJobsFilter {
|
|
|
3217
3666
|
*/
|
|
3218
3667
|
storeName?: string;
|
|
3219
3668
|
}
|
|
3669
|
+
/**
|
|
3670
|
+
* @public
|
|
3671
|
+
*/
|
|
3220
3672
|
export interface ListVariantImportJobsRequest {
|
|
3221
3673
|
/**
|
|
3222
3674
|
* <p>The maximum number of import jobs to return in one page of results.</p>
|
|
@@ -3236,6 +3688,7 @@ export interface ListVariantImportJobsRequest {
|
|
|
3236
3688
|
filter?: ListVariantImportJobsFilter;
|
|
3237
3689
|
}
|
|
3238
3690
|
/**
|
|
3691
|
+
* @public
|
|
3239
3692
|
* <p>A variant import job.</p>
|
|
3240
3693
|
*/
|
|
3241
3694
|
export interface VariantImportJobItem {
|
|
@@ -3272,6 +3725,9 @@ export interface VariantImportJobItem {
|
|
|
3272
3725
|
*/
|
|
3273
3726
|
runLeftNormalization?: boolean;
|
|
3274
3727
|
}
|
|
3728
|
+
/**
|
|
3729
|
+
* @public
|
|
3730
|
+
*/
|
|
3275
3731
|
export interface ListVariantImportJobsResponse {
|
|
3276
3732
|
/**
|
|
3277
3733
|
* <p>A list of jobs.</p>
|
|
@@ -3283,6 +3739,7 @@ export interface ListVariantImportJobsResponse {
|
|
|
3283
3739
|
nextToken?: string;
|
|
3284
3740
|
}
|
|
3285
3741
|
/**
|
|
3742
|
+
* @public
|
|
3286
3743
|
* <p>A filter for variant stores.</p>
|
|
3287
3744
|
*/
|
|
3288
3745
|
export interface ListVariantStoresFilter {
|
|
@@ -3291,6 +3748,9 @@ export interface ListVariantStoresFilter {
|
|
|
3291
3748
|
*/
|
|
3292
3749
|
status?: StoreStatus | string;
|
|
3293
3750
|
}
|
|
3751
|
+
/**
|
|
3752
|
+
* @public
|
|
3753
|
+
*/
|
|
3294
3754
|
export interface ListVariantStoresRequest {
|
|
3295
3755
|
/**
|
|
3296
3756
|
* <p>The maximum number of stores to return in one page of results.</p>
|
|
@@ -3310,6 +3770,7 @@ export interface ListVariantStoresRequest {
|
|
|
3310
3770
|
filter?: ListVariantStoresFilter;
|
|
3311
3771
|
}
|
|
3312
3772
|
/**
|
|
3773
|
+
* @public
|
|
3313
3774
|
* <p>A variant store.</p>
|
|
3314
3775
|
*/
|
|
3315
3776
|
export interface VariantStoreItem {
|
|
@@ -3358,6 +3819,9 @@ export interface VariantStoreItem {
|
|
|
3358
3819
|
*/
|
|
3359
3820
|
storeSizeBytes: number | undefined;
|
|
3360
3821
|
}
|
|
3822
|
+
/**
|
|
3823
|
+
* @public
|
|
3824
|
+
*/
|
|
3361
3825
|
export interface ListVariantStoresResponse {
|
|
3362
3826
|
/**
|
|
3363
3827
|
* <p>A list of variant stores.</p>
|
|
@@ -3368,6 +3832,9 @@ export interface ListVariantStoresResponse {
|
|
|
3368
3832
|
*/
|
|
3369
3833
|
nextToken?: string;
|
|
3370
3834
|
}
|
|
3835
|
+
/**
|
|
3836
|
+
* @public
|
|
3837
|
+
*/
|
|
3371
3838
|
export interface ListWorkflowsRequest {
|
|
3372
3839
|
/**
|
|
3373
3840
|
* <p>The workflows' type.</p>
|
|
@@ -3387,6 +3854,7 @@ export interface ListWorkflowsRequest {
|
|
|
3387
3854
|
maxResults?: number;
|
|
3388
3855
|
}
|
|
3389
3856
|
/**
|
|
3857
|
+
* @public
|
|
3390
3858
|
* <p>A workflow.</p>
|
|
3391
3859
|
*/
|
|
3392
3860
|
export interface WorkflowListItem {
|
|
@@ -3419,6 +3887,9 @@ export interface WorkflowListItem {
|
|
|
3419
3887
|
*/
|
|
3420
3888
|
creationTime?: Date;
|
|
3421
3889
|
}
|
|
3890
|
+
/**
|
|
3891
|
+
* @public
|
|
3892
|
+
*/
|
|
3422
3893
|
export interface ListWorkflowsResponse {
|
|
3423
3894
|
/**
|
|
3424
3895
|
* <p>The workflows' items.</p>
|
|
@@ -3430,6 +3901,7 @@ export interface ListWorkflowsResponse {
|
|
|
3430
3901
|
nextToken?: string;
|
|
3431
3902
|
}
|
|
3432
3903
|
/**
|
|
3904
|
+
* @public
|
|
3433
3905
|
* <p>A source for a reference import job.</p>
|
|
3434
3906
|
*/
|
|
3435
3907
|
export interface StartReferenceImportJobSourceItem {
|
|
@@ -3450,6 +3922,9 @@ export interface StartReferenceImportJobSourceItem {
|
|
|
3450
3922
|
*/
|
|
3451
3923
|
tags?: Record<string, string>;
|
|
3452
3924
|
}
|
|
3925
|
+
/**
|
|
3926
|
+
* @public
|
|
3927
|
+
*/
|
|
3453
3928
|
export interface StartReferenceImportJobRequest {
|
|
3454
3929
|
/**
|
|
3455
3930
|
* <p>The job's reference store ID.</p>
|
|
@@ -3468,6 +3943,9 @@ export interface StartReferenceImportJobRequest {
|
|
|
3468
3943
|
*/
|
|
3469
3944
|
sources: StartReferenceImportJobSourceItem[] | undefined;
|
|
3470
3945
|
}
|
|
3946
|
+
/**
|
|
3947
|
+
* @public
|
|
3948
|
+
*/
|
|
3471
3949
|
export interface StartReferenceImportJobResponse {
|
|
3472
3950
|
/**
|
|
3473
3951
|
* <p>The job's ID.</p>
|
|
@@ -3490,6 +3968,9 @@ export interface StartReferenceImportJobResponse {
|
|
|
3490
3968
|
*/
|
|
3491
3969
|
creationTime: Date | undefined;
|
|
3492
3970
|
}
|
|
3971
|
+
/**
|
|
3972
|
+
* @public
|
|
3973
|
+
*/
|
|
3493
3974
|
export interface UpdateRunGroupRequest {
|
|
3494
3975
|
/**
|
|
3495
3976
|
* <p>The group's ID.</p>
|
|
@@ -3512,6 +3993,9 @@ export interface UpdateRunGroupRequest {
|
|
|
3512
3993
|
*/
|
|
3513
3994
|
maxDuration?: number;
|
|
3514
3995
|
}
|
|
3996
|
+
/**
|
|
3997
|
+
* @public
|
|
3998
|
+
*/
|
|
3515
3999
|
export interface StartRunRequest {
|
|
3516
4000
|
/**
|
|
3517
4001
|
* <p>The run's workflow ID.</p>
|
|
@@ -3566,6 +4050,9 @@ export interface StartRunRequest {
|
|
|
3566
4050
|
*/
|
|
3567
4051
|
requestId?: string;
|
|
3568
4052
|
}
|
|
4053
|
+
/**
|
|
4054
|
+
* @public
|
|
4055
|
+
*/
|
|
3569
4056
|
export interface StartRunResponse {
|
|
3570
4057
|
/**
|
|
3571
4058
|
* <p>The run's ARN.</p>
|
|
@@ -3585,6 +4072,7 @@ export interface StartRunResponse {
|
|
|
3585
4072
|
tags?: Record<string, string>;
|
|
3586
4073
|
}
|
|
3587
4074
|
/**
|
|
4075
|
+
* @public
|
|
3588
4076
|
* <p>A source for a read set activation job.</p>
|
|
3589
4077
|
*/
|
|
3590
4078
|
export interface StartReadSetActivationJobSourceItem {
|
|
@@ -3593,6 +4081,9 @@ export interface StartReadSetActivationJobSourceItem {
|
|
|
3593
4081
|
*/
|
|
3594
4082
|
readSetId: string | undefined;
|
|
3595
4083
|
}
|
|
4084
|
+
/**
|
|
4085
|
+
* @public
|
|
4086
|
+
*/
|
|
3596
4087
|
export interface StartReadSetActivationJobRequest {
|
|
3597
4088
|
/**
|
|
3598
4089
|
* <p>The read set's sequence store ID.</p>
|
|
@@ -3607,6 +4098,9 @@ export interface StartReadSetActivationJobRequest {
|
|
|
3607
4098
|
*/
|
|
3608
4099
|
sources: StartReadSetActivationJobSourceItem[] | undefined;
|
|
3609
4100
|
}
|
|
4101
|
+
/**
|
|
4102
|
+
* @public
|
|
4103
|
+
*/
|
|
3610
4104
|
export interface StartReadSetActivationJobResponse {
|
|
3611
4105
|
/**
|
|
3612
4106
|
* <p>The job's ID.</p>
|
|
@@ -3625,6 +4119,9 @@ export interface StartReadSetActivationJobResponse {
|
|
|
3625
4119
|
*/
|
|
3626
4120
|
creationTime: Date | undefined;
|
|
3627
4121
|
}
|
|
4122
|
+
/**
|
|
4123
|
+
* @public
|
|
4124
|
+
*/
|
|
3628
4125
|
export interface StartReadSetExportJobRequest {
|
|
3629
4126
|
/**
|
|
3630
4127
|
* <p>The read set's sequence store ID.</p>
|
|
@@ -3647,6 +4144,9 @@ export interface StartReadSetExportJobRequest {
|
|
|
3647
4144
|
*/
|
|
3648
4145
|
sources: ExportReadSet[] | undefined;
|
|
3649
4146
|
}
|
|
4147
|
+
/**
|
|
4148
|
+
* @public
|
|
4149
|
+
*/
|
|
3650
4150
|
export interface StartReadSetExportJobResponse {
|
|
3651
4151
|
/**
|
|
3652
4152
|
* <p>The job's ID.</p>
|
|
@@ -3670,6 +4170,7 @@ export interface StartReadSetExportJobResponse {
|
|
|
3670
4170
|
creationTime: Date | undefined;
|
|
3671
4171
|
}
|
|
3672
4172
|
/**
|
|
4173
|
+
* @public
|
|
3673
4174
|
* <p>A source for a read set import job.</p>
|
|
3674
4175
|
*/
|
|
3675
4176
|
export interface StartReadSetImportJobSourceItem {
|
|
@@ -3710,6 +4211,9 @@ export interface StartReadSetImportJobSourceItem {
|
|
|
3710
4211
|
*/
|
|
3711
4212
|
tags?: Record<string, string>;
|
|
3712
4213
|
}
|
|
4214
|
+
/**
|
|
4215
|
+
* @public
|
|
4216
|
+
*/
|
|
3713
4217
|
export interface StartReadSetImportJobRequest {
|
|
3714
4218
|
/**
|
|
3715
4219
|
* <p>The read set's sequence store ID.</p>
|
|
@@ -3728,6 +4232,9 @@ export interface StartReadSetImportJobRequest {
|
|
|
3728
4232
|
*/
|
|
3729
4233
|
sources: StartReadSetImportJobSourceItem[] | undefined;
|
|
3730
4234
|
}
|
|
4235
|
+
/**
|
|
4236
|
+
* @public
|
|
4237
|
+
*/
|
|
3731
4238
|
export interface StartReadSetImportJobResponse {
|
|
3732
4239
|
/**
|
|
3733
4240
|
* <p>The job's ID.</p>
|
|
@@ -3750,6 +4257,9 @@ export interface StartReadSetImportJobResponse {
|
|
|
3750
4257
|
*/
|
|
3751
4258
|
creationTime: Date | undefined;
|
|
3752
4259
|
}
|
|
4260
|
+
/**
|
|
4261
|
+
* @public
|
|
4262
|
+
*/
|
|
3753
4263
|
export interface TagResourceRequest {
|
|
3754
4264
|
/**
|
|
3755
4265
|
* <p>The resource's ARN.</p>
|
|
@@ -3760,8 +4270,14 @@ export interface TagResourceRequest {
|
|
|
3760
4270
|
*/
|
|
3761
4271
|
tags: Record<string, string> | undefined;
|
|
3762
4272
|
}
|
|
4273
|
+
/**
|
|
4274
|
+
* @public
|
|
4275
|
+
*/
|
|
3763
4276
|
export interface TagResourceResponse {
|
|
3764
4277
|
}
|
|
4278
|
+
/**
|
|
4279
|
+
* @public
|
|
4280
|
+
*/
|
|
3765
4281
|
export interface UntagResourceRequest {
|
|
3766
4282
|
/**
|
|
3767
4283
|
* <p>The resource's ARN.</p>
|
|
@@ -3772,9 +4288,13 @@ export interface UntagResourceRequest {
|
|
|
3772
4288
|
*/
|
|
3773
4289
|
tagKeys: string[] | undefined;
|
|
3774
4290
|
}
|
|
4291
|
+
/**
|
|
4292
|
+
* @public
|
|
4293
|
+
*/
|
|
3775
4294
|
export interface UntagResourceResponse {
|
|
3776
4295
|
}
|
|
3777
4296
|
/**
|
|
4297
|
+
* @public
|
|
3778
4298
|
* <p>A imported variant item's source.</p>
|
|
3779
4299
|
*/
|
|
3780
4300
|
export interface VariantImportItemSource {
|
|
@@ -3783,6 +4303,9 @@ export interface VariantImportItemSource {
|
|
|
3783
4303
|
*/
|
|
3784
4304
|
source: string | undefined;
|
|
3785
4305
|
}
|
|
4306
|
+
/**
|
|
4307
|
+
* @public
|
|
4308
|
+
*/
|
|
3786
4309
|
export interface StartVariantImportRequest {
|
|
3787
4310
|
/**
|
|
3788
4311
|
* <p>The destination variant store for the job.</p>
|
|
@@ -3801,12 +4324,18 @@ export interface StartVariantImportRequest {
|
|
|
3801
4324
|
*/
|
|
3802
4325
|
runLeftNormalization?: boolean;
|
|
3803
4326
|
}
|
|
4327
|
+
/**
|
|
4328
|
+
* @public
|
|
4329
|
+
*/
|
|
3804
4330
|
export interface StartVariantImportResponse {
|
|
3805
4331
|
/**
|
|
3806
4332
|
* <p>The job's ID.</p>
|
|
3807
4333
|
*/
|
|
3808
4334
|
jobId: string | undefined;
|
|
3809
4335
|
}
|
|
4336
|
+
/**
|
|
4337
|
+
* @public
|
|
4338
|
+
*/
|
|
3810
4339
|
export interface UpdateVariantStoreRequest {
|
|
3811
4340
|
/**
|
|
3812
4341
|
* <p>A name for the store.</p>
|
|
@@ -3817,6 +4346,9 @@ export interface UpdateVariantStoreRequest {
|
|
|
3817
4346
|
*/
|
|
3818
4347
|
description?: string;
|
|
3819
4348
|
}
|
|
4349
|
+
/**
|
|
4350
|
+
* @public
|
|
4351
|
+
*/
|
|
3820
4352
|
export interface UpdateVariantStoreResponse {
|
|
3821
4353
|
/**
|
|
3822
4354
|
* <p>The store's ID.</p>
|
|
@@ -3847,6 +4379,9 @@ export interface UpdateVariantStoreResponse {
|
|
|
3847
4379
|
*/
|
|
3848
4380
|
updateTime: Date | undefined;
|
|
3849
4381
|
}
|
|
4382
|
+
/**
|
|
4383
|
+
* @public
|
|
4384
|
+
*/
|
|
3850
4385
|
export interface UpdateWorkflowRequest {
|
|
3851
4386
|
/**
|
|
3852
4387
|
* <p>The workflow's ID.</p>
|