@aws-sdk/client-omics 3.1014.0 → 3.1016.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +56 -7
- package/dist-cjs/index.js +141 -14
- package/dist-cjs/schemas/schemas_0.js +230 -32
- package/dist-es/Omics.js +18 -0
- package/dist-es/commands/CancelRunBatchCommand.js +16 -0
- package/dist-es/commands/DeleteBatchCommand.js +16 -0
- package/dist-es/commands/DeleteRunBatchCommand.js +16 -0
- package/dist-es/commands/GetBatchCommand.js +16 -0
- package/dist-es/commands/ListBatchCommand.js +16 -0
- package/dist-es/commands/ListRunsInBatchCommand.js +16 -0
- package/dist-es/commands/StartRunBatchCommand.js +16 -0
- package/dist-es/commands/index.js +7 -0
- package/dist-es/models/enums.js +33 -14
- package/dist-es/pagination/ListBatchPaginator.js +4 -0
- package/dist-es/pagination/ListRunsInBatchPaginator.js +4 -0
- package/dist-es/pagination/index.js +2 -0
- package/dist-es/schemas/schemas_0.js +222 -24
- package/dist-types/Omics.d.ts +64 -0
- package/dist-types/OmicsClient.d.ts +9 -2
- package/dist-types/commands/CancelAnnotationImportJobCommand.d.ts +1 -1
- package/dist-types/commands/CancelRunBatchCommand.d.ts +96 -0
- package/dist-types/commands/CancelVariantImportJobCommand.d.ts +1 -1
- package/dist-types/commands/CreateAnnotationStoreCommand.d.ts +1 -1
- package/dist-types/commands/CreateVariantStoreCommand.d.ts +1 -1
- package/dist-types/commands/DeleteAnnotationStoreCommand.d.ts +1 -1
- package/dist-types/commands/DeleteBatchCommand.d.ts +96 -0
- package/dist-types/commands/DeleteRunBatchCommand.d.ts +96 -0
- package/dist-types/commands/DeleteVariantStoreCommand.d.ts +1 -1
- package/dist-types/commands/GetAnnotationImportJobCommand.d.ts +1 -1
- package/dist-types/commands/GetAnnotationStoreCommand.d.ts +1 -1
- package/dist-types/commands/GetBatchCommand.d.ts +146 -0
- package/dist-types/commands/GetRunCommand.d.ts +1 -0
- package/dist-types/commands/GetVariantImportJobCommand.d.ts +1 -1
- package/dist-types/commands/GetVariantStoreCommand.d.ts +1 -1
- package/dist-types/commands/ListAnnotationImportJobsCommand.d.ts +1 -1
- package/dist-types/commands/ListAnnotationStoresCommand.d.ts +1 -1
- package/dist-types/commands/ListBatchCommand.d.ts +103 -0
- package/dist-types/commands/ListRunsCommand.d.ts +2 -0
- package/dist-types/commands/ListRunsInBatchCommand.d.ts +114 -0
- package/dist-types/commands/ListVariantImportJobsCommand.d.ts +1 -1
- package/dist-types/commands/ListVariantStoresCommand.d.ts +1 -1
- package/dist-types/commands/StartAnnotationImportJobCommand.d.ts +1 -1
- package/dist-types/commands/StartRunBatchCommand.d.ts +144 -0
- package/dist-types/commands/StartVariantImportJobCommand.d.ts +1 -1
- package/dist-types/commands/UpdateAnnotationStoreCommand.d.ts +1 -1
- package/dist-types/commands/UpdateVariantStoreCommand.d.ts +1 -1
- package/dist-types/commands/index.d.ts +7 -0
- package/dist-types/models/enums.d.ts +73 -38
- package/dist-types/models/models_0.d.ts +648 -2
- package/dist-types/pagination/ListBatchPaginator.d.ts +7 -0
- package/dist-types/pagination/ListRunsInBatchPaginator.d.ts +7 -0
- package/dist-types/pagination/index.d.ts +2 -0
- package/dist-types/schemas/schemas_0.d.ts +27 -0
- package/dist-types/ts3.4/Omics.d.ts +134 -0
- package/dist-types/ts3.4/OmicsClient.d.ts +42 -0
- package/dist-types/ts3.4/commands/CancelRunBatchCommand.d.ts +50 -0
- package/dist-types/ts3.4/commands/DeleteBatchCommand.d.ts +45 -0
- package/dist-types/ts3.4/commands/DeleteRunBatchCommand.d.ts +50 -0
- package/dist-types/ts3.4/commands/GetBatchCommand.d.ts +47 -0
- package/dist-types/ts3.4/commands/ListBatchCommand.d.ts +47 -0
- package/dist-types/ts3.4/commands/ListRunsInBatchCommand.d.ts +50 -0
- package/dist-types/ts3.4/commands/StartRunBatchCommand.d.ts +50 -0
- package/dist-types/ts3.4/commands/index.d.ts +7 -0
- package/dist-types/ts3.4/models/enums.d.ts +40 -18
- package/dist-types/ts3.4/models/models_0.d.ts +164 -0
- package/dist-types/ts3.4/pagination/ListBatchPaginator.d.ts +11 -0
- package/dist-types/ts3.4/pagination/ListRunsInBatchPaginator.d.ts +11 -0
- package/dist-types/ts3.4/pagination/index.d.ts +2 -0
- package/dist-types/ts3.4/schemas/schemas_0.d.ts +27 -0
- package/package.json +5 -5
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import { AutomaticJsonStringConversion as __AutomaticJsonStringConversion } from "@smithy/smithy-client";
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import { DocumentType as __DocumentType, StreamingBlobTypes } from "@smithy/types";
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import { Accelerators, AnnotationType, CacheBehavior, CreationType, EncryptionType, ETagAlgorithm, ETagAlgorithmFamily, FileType, FormatToHeaderKey, JobStatus, ReadSetActivationJobItemStatus, ReadSetActivationJobStatus, ReadSetExportJobItemStatus, ReadSetExportJobStatus, ReadSetFile, ReadSetImportJobItemStatus, ReadSetImportJobStatus, ReadSetPartSource, ReadSetStatus, ReferenceCreationType, ReferenceFile, ReferenceImportJobItemStatus, ReferenceImportJobStatus, ReferenceStatus, ResourceOwner, RunCacheStatus, RunExport, RunLogLevel, RunRetentionMode, RunStatus, SchemaValueType, SequenceStoreStatus, ShareResourceType, ShareStatus, SourceReferenceType, StorageType, StoreFormat, StoreStatus, StoreType, TaskStatus, VersionStatus, WorkflowEngine, WorkflowExport, WorkflowStatus, WorkflowType } from "./enums";
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import { Accelerators, AnnotationType, BatchStatus, CacheBehavior, CreationType, EncryptionType, ETagAlgorithm, ETagAlgorithmFamily, FileType, FormatToHeaderKey, JobStatus, ReadSetActivationJobItemStatus, ReadSetActivationJobStatus, ReadSetExportJobItemStatus, ReadSetExportJobStatus, ReadSetFile, ReadSetImportJobItemStatus, ReadSetImportJobStatus, ReadSetPartSource, ReadSetStatus, ReferenceCreationType, ReferenceFile, ReferenceImportJobItemStatus, ReferenceImportJobStatus, ReferenceStatus, ResourceOwner, RunCacheStatus, RunExport, RunLogLevel, RunRetentionMode, RunStatus, SchemaValueType, SequenceStoreStatus, ShareResourceType, ShareStatus, SourceReferenceType, StorageType, StoreFormat, StoreStatus, StoreType, SubmissionStatus, TaskStatus, VersionStatus, WorkflowEngine, WorkflowExport, WorkflowStatus, WorkflowType } from "./enums";
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/**
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* @public
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*/
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@@ -1489,6 +1489,128 @@ export interface BatchDeleteReadSetResponse {
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errors?: ReadSetBatchError[] | undefined;
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}
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/**
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* <p>A summary of a batch returned by <code>ListBatch</code>.</p>
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* @public
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*/
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export interface BatchListItem {
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/**
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* <p>The batch identifier.</p>
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* @public
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*/
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id?: string | undefined;
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/**
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* <p>The batch name.</p>
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* @public
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*/
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name?: string | undefined;
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/**
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* <p>The current batch status.</p>
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* @public
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*/
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status?: BatchStatus | undefined;
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/**
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* <p>The timestamp when the batch was created.</p>
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* @public
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*/
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createdAt?: Date | undefined;
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/**
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* <p>The total number of runs in the batch.</p>
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* @public
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*/
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totalRuns?: number | undefined;
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/**
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* <p>The identifier of the workflow used for the batch.</p>
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*/
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workflowId?: string | undefined;
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}
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/**
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* <p>A per-run configuration that overrides or merges with fields from <code>DefaultRunSetting</code> for a specific run.</p>
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* @public
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*/
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export interface InlineSetting {
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/**
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* <p>A customer-provided unique identifier for this run configuration within the batch. After submission, use <code>ListRunsInBatch</code> to map each <code>runSettingId</code> to the HealthOmics-generated <code>runId</code>.</p>
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* @public
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*/
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runSettingId: string | undefined;
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/**
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* <p>An optional user-friendly name for this run.</p>
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*/
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name?: string | undefined;
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/**
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* <p>Override the destination S3 URI for this run's outputs.</p>
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* @public
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outputUri?: string | undefined;
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/**
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* <p>Override the priority for this run.</p>
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* @public
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*/
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priority?: number | undefined;
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/**
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* <p>Per-run workflow parameters. Merged with <code>defaultRunSetting.parameters</code>; values in this object take precedence when keys overlap.</p>
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* @public
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*/
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parameters?: __DocumentType | undefined;
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/**
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* <p>The expected AWS account ID of the owner of the output S3 bucket for this run.</p>
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*/
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outputBucketOwnerId?: string | undefined;
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/**
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* <p>Per-run AWS tags. Merged with <code>defaultRunSetting.runTags</code>; values in this object take precedence when keys overlap.</p>
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runTags?: Record<string, string> | undefined;
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}
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/**
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* <p>A union type representing per-run configurations for the batch. Specify exactly one of the following members.</p>
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export type BatchRunSettings = BatchRunSettings.InlineSettingsMember | BatchRunSettings.S3UriSettingsMember | BatchRunSettings.$UnknownMember;
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export declare namespace BatchRunSettings {
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/**
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* <p>A list of per-run configurations provided inline in the request. Each entry must include a unique <code>runSettingId</code>. Supports up to 100 entries. For batches with more than 100 runs, use <code>s3UriSettings</code>.</p>
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interface InlineSettingsMember {
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inlineSettings: InlineSetting[];
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s3UriSettings?: never;
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$unknown?: never;
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}
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* <p>An Amazon S3 URI pointing to a JSON file containing per-run configurations. The file must be a JSON array in the same format as <code>inlineSettings</code>. Supports up to 100,000 run configurations. The maximum file size is 6 GB.</p> <p>The IAM service role in <code>roleArn</code> must have read access to this S3 object. HealthOmics validates access to the file during the synchronous API call and records the file's ETag. If the file is modified after submission, the batch fails.</p>
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interface S3UriSettingsMember {
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inlineSettings?: never;
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s3UriSettings: string;
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$unknown?: never;
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}
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interface $UnknownMember {
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inlineSettings?: never;
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s3UriSettings?: never;
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$unknown: [string, any];
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}
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*
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interface Visitor<T> {
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inlineSettings: (value: InlineSetting[]) => T;
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}
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}
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* <p>The workflow engine for the workflow. By default, Amazon Web Services HealthOmics detects the engine automatically from your workflow definition. Provide a value if you have workflow definition files from more than one engine in your zip file, or to use WDL lenient.</p> <p>WDL lenient is designed to handle workflows migrated from Cromwell. It supports customer Cromwell directives and some non-conformant logic. For details, see <a href="https://docs.aws.amazon.com/omics/latest/dev/workflow-wdl-type-conversion.html">Implicit type conversion in WDL lenient</a> in the <i>Amazon Web Services HealthOmics User Guide</i>.</p>
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* <p>Shared configuration applied to all runs in a batch. Fields specified in a per-run <code>InlineSetting</code> entry override the corresponding fields in this object for that run. The <code>parameters</code> and <code>runTags</code> fields are merged rather than replaced — run-specific values take precedence when keys overlap.</p>
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* <p>The IAM role ARN that grants HealthOmics permissions to access required AWS resources such as Amazon S3 and CloudWatch. The role must have the same permissions required for individual <code>StartRun</code> calls.</p>
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* <p>An integer priority for the workflow runs. Higher values correspond to higher priority. A value of 0 corresponds to the lowest priority. Can be overridden per run.</p>
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* <p>Workflow parameter names and values shared across all runs. Merged with per-run parameters; run-specific values take precedence when keys overlap. Can be overridden per run.</p>
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* <p>The filesystem size in gibibytes (GiB) provisioned for each workflow run and shared by all tasks in that run. Defaults to 1200 GiB if not specified.</p>
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* <p>The destination S3 URI for workflow outputs. Must begin with <code>s3://</code>. The <code>roleArn</code> must grant write permissions to this bucket. Can be overridden per run.</p>
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2712
|
+
outputUri?: string | undefined;
|
|
2713
|
+
/**
|
|
2714
|
+
* <p>The verbosity level for CloudWatch Logs emitted during each run.</p>
|
|
2715
|
+
* @public
|
|
2716
|
+
*/
|
|
2717
|
+
logLevel?: RunLogLevel | undefined;
|
|
2718
|
+
/**
|
|
2719
|
+
* <p>AWS tags to associate with each workflow run. Merged with per-run <code>runTags</code>; run-specific values take precedence when keys overlap.</p>
|
|
2720
|
+
* @public
|
|
2721
|
+
*/
|
|
2722
|
+
runTags?: Record<string, string> | undefined;
|
|
2723
|
+
/**
|
|
2724
|
+
* <p>The retention behavior for runs after completion.</p>
|
|
2725
|
+
* @public
|
|
2726
|
+
*/
|
|
2727
|
+
retentionMode?: RunRetentionMode | undefined;
|
|
2728
|
+
/**
|
|
2729
|
+
* <p>The storage type for the workflow runs.</p>
|
|
2730
|
+
* @public
|
|
2731
|
+
*/
|
|
2732
|
+
storageType?: StorageType | undefined;
|
|
2733
|
+
/**
|
|
2734
|
+
* <p>The AWS account ID of the workflow owner, used for cross-account workflow sharing.</p>
|
|
2735
|
+
* @public
|
|
2736
|
+
*/
|
|
2737
|
+
workflowOwnerId?: string | undefined;
|
|
2738
|
+
/**
|
|
2739
|
+
* <p>The expected AWS account ID of the owner of the output S3 bucket. Can be overridden per run.</p>
|
|
2740
|
+
* @public
|
|
2741
|
+
*/
|
|
2742
|
+
outputBucketOwnerId?: string | undefined;
|
|
2743
|
+
/**
|
|
2744
|
+
* <p>The version name of the specified workflow.</p>
|
|
2745
|
+
* @public
|
|
2746
|
+
*/
|
|
2747
|
+
workflowVersionName?: string | undefined;
|
|
2748
|
+
}
|
|
2516
2749
|
/**
|
|
2517
2750
|
* <p>Contains detailed information about the source code repository that hosts the workflow definition files.</p>
|
|
2518
2751
|
* @public
|
|
@@ -2544,6 +2777,16 @@ export interface DefinitionRepositoryDetails {
|
|
|
2544
2777
|
*/
|
|
2545
2778
|
providerEndpoint?: string | undefined;
|
|
2546
2779
|
}
|
|
2780
|
+
/**
|
|
2781
|
+
* @public
|
|
2782
|
+
*/
|
|
2783
|
+
export interface DeleteBatchRequest {
|
|
2784
|
+
/**
|
|
2785
|
+
* <p>The identifier portion of the run batch ARN.</p>
|
|
2786
|
+
* @public
|
|
2787
|
+
*/
|
|
2788
|
+
batchId: string | undefined;
|
|
2789
|
+
}
|
|
2547
2790
|
/**
|
|
2548
2791
|
* @public
|
|
2549
2792
|
*/
|
|
@@ -2589,6 +2832,21 @@ export interface DeleteRunRequest {
|
|
|
2589
2832
|
*/
|
|
2590
2833
|
id: string | undefined;
|
|
2591
2834
|
}
|
|
2835
|
+
/**
|
|
2836
|
+
* @public
|
|
2837
|
+
*/
|
|
2838
|
+
export interface DeleteRunBatchRequest {
|
|
2839
|
+
/**
|
|
2840
|
+
* <p>The identifier portion of the run batch ARN.</p>
|
|
2841
|
+
* @public
|
|
2842
|
+
*/
|
|
2843
|
+
batchId: string | undefined;
|
|
2844
|
+
}
|
|
2845
|
+
/**
|
|
2846
|
+
* @public
|
|
2847
|
+
*/
|
|
2848
|
+
export interface DeleteRunBatchResponse {
|
|
2849
|
+
}
|
|
2592
2850
|
/**
|
|
2593
2851
|
* @public
|
|
2594
2852
|
*/
|
|
@@ -2877,6 +3135,183 @@ export interface Filter {
|
|
|
2877
3135
|
*/
|
|
2878
3136
|
type?: ShareResourceType[] | undefined;
|
|
2879
3137
|
}
|
|
3138
|
+
/**
|
|
3139
|
+
* @public
|
|
3140
|
+
*/
|
|
3141
|
+
export interface GetBatchRequest {
|
|
3142
|
+
/**
|
|
3143
|
+
* <p>The identifier portion of the run batch ARN.</p>
|
|
3144
|
+
* @public
|
|
3145
|
+
*/
|
|
3146
|
+
batchId: string | undefined;
|
|
3147
|
+
}
|
|
3148
|
+
/**
|
|
3149
|
+
* <p>A summary of the runs in a batch.</p>
|
|
3150
|
+
* @public
|
|
3151
|
+
*/
|
|
3152
|
+
export interface RunSummary {
|
|
3153
|
+
/**
|
|
3154
|
+
* <p>The number of pending runs.</p>
|
|
3155
|
+
* @public
|
|
3156
|
+
*/
|
|
3157
|
+
pendingRunCount?: number | undefined;
|
|
3158
|
+
/**
|
|
3159
|
+
* <p>The number of starting runs.</p>
|
|
3160
|
+
* @public
|
|
3161
|
+
*/
|
|
3162
|
+
startingRunCount?: number | undefined;
|
|
3163
|
+
/**
|
|
3164
|
+
* <p>The number of running runs.</p>
|
|
3165
|
+
* @public
|
|
3166
|
+
*/
|
|
3167
|
+
runningRunCount?: number | undefined;
|
|
3168
|
+
/**
|
|
3169
|
+
* <p>The number of stopping runs.</p>
|
|
3170
|
+
* @public
|
|
3171
|
+
*/
|
|
3172
|
+
stoppingRunCount?: number | undefined;
|
|
3173
|
+
/**
|
|
3174
|
+
* <p>The number of completed runs.</p>
|
|
3175
|
+
* @public
|
|
3176
|
+
*/
|
|
3177
|
+
completedRunCount?: number | undefined;
|
|
3178
|
+
/**
|
|
3179
|
+
* <p>The number of deleted runs.</p>
|
|
3180
|
+
* @public
|
|
3181
|
+
*/
|
|
3182
|
+
deletedRunCount?: number | undefined;
|
|
3183
|
+
/**
|
|
3184
|
+
* <p>The number of failed runs.</p>
|
|
3185
|
+
* @public
|
|
3186
|
+
*/
|
|
3187
|
+
failedRunCount?: number | undefined;
|
|
3188
|
+
/**
|
|
3189
|
+
* <p>The number of cancelled runs.</p>
|
|
3190
|
+
* @public
|
|
3191
|
+
*/
|
|
3192
|
+
cancelledRunCount?: number | undefined;
|
|
3193
|
+
}
|
|
3194
|
+
/**
|
|
3195
|
+
* <p>A summary of the submissions in a batch.</p>
|
|
3196
|
+
* @public
|
|
3197
|
+
*/
|
|
3198
|
+
export interface SubmissionSummary {
|
|
3199
|
+
/**
|
|
3200
|
+
* <p>The number of successful start submissions.</p>
|
|
3201
|
+
* @public
|
|
3202
|
+
*/
|
|
3203
|
+
successfulStartSubmissionCount?: number | undefined;
|
|
3204
|
+
/**
|
|
3205
|
+
* <p>The number of failed start submissions.</p>
|
|
3206
|
+
* @public
|
|
3207
|
+
*/
|
|
3208
|
+
failedStartSubmissionCount?: number | undefined;
|
|
3209
|
+
/**
|
|
3210
|
+
* <p>The number of pending start submissions.</p>
|
|
3211
|
+
* @public
|
|
3212
|
+
*/
|
|
3213
|
+
pendingStartSubmissionCount?: number | undefined;
|
|
3214
|
+
/**
|
|
3215
|
+
* <p>The number of successful cancel submissions.</p>
|
|
3216
|
+
* @public
|
|
3217
|
+
*/
|
|
3218
|
+
successfulCancelSubmissionCount?: number | undefined;
|
|
3219
|
+
/**
|
|
3220
|
+
* <p>The number of failed cancel submissions.</p>
|
|
3221
|
+
* @public
|
|
3222
|
+
*/
|
|
3223
|
+
failedCancelSubmissionCount?: number | undefined;
|
|
3224
|
+
/**
|
|
3225
|
+
* <p>The number of successful delete submissions.</p>
|
|
3226
|
+
* @public
|
|
3227
|
+
*/
|
|
3228
|
+
successfulDeleteSubmissionCount?: number | undefined;
|
|
3229
|
+
/**
|
|
3230
|
+
* <p>The number of failed delete submissions.</p>
|
|
3231
|
+
* @public
|
|
3232
|
+
*/
|
|
3233
|
+
failedDeleteSubmissionCount?: number | undefined;
|
|
3234
|
+
}
|
|
3235
|
+
/**
|
|
3236
|
+
* @public
|
|
3237
|
+
*/
|
|
3238
|
+
export interface GetBatchResponse {
|
|
3239
|
+
/**
|
|
3240
|
+
* <p>The identifier portion of the run batch ARN.</p>
|
|
3241
|
+
* @public
|
|
3242
|
+
*/
|
|
3243
|
+
id?: string | undefined;
|
|
3244
|
+
/**
|
|
3245
|
+
* <p>The unique ARN of the run batch.</p>
|
|
3246
|
+
* @public
|
|
3247
|
+
*/
|
|
3248
|
+
arn?: string | undefined;
|
|
3249
|
+
/**
|
|
3250
|
+
* <p>The universally unique identifier (UUID) for the run batch.</p>
|
|
3251
|
+
* @public
|
|
3252
|
+
*/
|
|
3253
|
+
uuid?: string | undefined;
|
|
3254
|
+
/**
|
|
3255
|
+
* <p>The optional user-friendly name of the batch.</p>
|
|
3256
|
+
* @public
|
|
3257
|
+
*/
|
|
3258
|
+
name?: string | undefined;
|
|
3259
|
+
/**
|
|
3260
|
+
* <p>The current status of the run batch.</p>
|
|
3261
|
+
* @public
|
|
3262
|
+
*/
|
|
3263
|
+
status?: BatchStatus | undefined;
|
|
3264
|
+
/**
|
|
3265
|
+
* <p>AWS tags associated with the run batch.</p>
|
|
3266
|
+
* @public
|
|
3267
|
+
*/
|
|
3268
|
+
tags?: Record<string, string> | undefined;
|
|
3269
|
+
/**
|
|
3270
|
+
* <p>The total number of runs in the batch.</p>
|
|
3271
|
+
* @public
|
|
3272
|
+
*/
|
|
3273
|
+
totalRuns?: number | undefined;
|
|
3274
|
+
/**
|
|
3275
|
+
* <p>The shared configuration applied to all runs in the batch. See <code>DefaultRunSetting</code>.</p>
|
|
3276
|
+
* @public
|
|
3277
|
+
*/
|
|
3278
|
+
defaultRunSetting?: DefaultRunSetting | undefined;
|
|
3279
|
+
/**
|
|
3280
|
+
* <p>A summary of run submission outcomes. See <code>SubmissionSummary</code>.</p>
|
|
3281
|
+
* @public
|
|
3282
|
+
*/
|
|
3283
|
+
submissionSummary?: SubmissionSummary | undefined;
|
|
3284
|
+
/**
|
|
3285
|
+
* <p>A summary of run execution states. Run execution counts are eventually consistent and may lag behind actual run states. Final counts are accurate once the batch reaches <code>PROCESSED</code> status. See <code>RunSummary</code>.</p>
|
|
3286
|
+
* @public
|
|
3287
|
+
*/
|
|
3288
|
+
runSummary?: RunSummary | undefined;
|
|
3289
|
+
/**
|
|
3290
|
+
* <p>The timestamp when the batch was created.</p>
|
|
3291
|
+
* @public
|
|
3292
|
+
*/
|
|
3293
|
+
creationTime?: Date | undefined;
|
|
3294
|
+
/**
|
|
3295
|
+
* <p>The timestamp when all run submissions completed.</p>
|
|
3296
|
+
* @public
|
|
3297
|
+
*/
|
|
3298
|
+
submittedTime?: Date | undefined;
|
|
3299
|
+
/**
|
|
3300
|
+
* <p>The timestamp when all run executions completed.</p>
|
|
3301
|
+
* @public
|
|
3302
|
+
*/
|
|
3303
|
+
processedTime?: Date | undefined;
|
|
3304
|
+
/**
|
|
3305
|
+
* <p>The timestamp when the batch transitioned to a <code>FAILED</code> status.</p>
|
|
3306
|
+
* @public
|
|
3307
|
+
*/
|
|
3308
|
+
failedTime?: Date | undefined;
|
|
3309
|
+
/**
|
|
3310
|
+
* <p>A description of the batch failure. Present only when status is <code>FAILED</code>.</p>
|
|
3311
|
+
* @public
|
|
3312
|
+
*/
|
|
3313
|
+
failureReason?: string | undefined;
|
|
3314
|
+
}
|
|
2880
3315
|
/**
|
|
2881
3316
|
* @public
|
|
2882
3317
|
*/
|
|
@@ -3698,6 +4133,11 @@ export interface GetRunResponse {
|
|
|
3698
4133
|
* @public
|
|
3699
4134
|
*/
|
|
3700
4135
|
runGroupId?: string | undefined;
|
|
4136
|
+
/**
|
|
4137
|
+
* <p>The run's batch ID.</p>
|
|
4138
|
+
* @public
|
|
4139
|
+
*/
|
|
4140
|
+
batchId?: string | undefined;
|
|
3701
4141
|
/**
|
|
3702
4142
|
* <p>The run's priority.</p>
|
|
3703
4143
|
* @public
|
|
@@ -4841,6 +5281,51 @@ export interface ImportReferenceJobItem {
|
|
|
4841
5281
|
*/
|
|
4842
5282
|
completionTime?: Date | undefined;
|
|
4843
5283
|
}
|
|
5284
|
+
/**
|
|
5285
|
+
* @public
|
|
5286
|
+
*/
|
|
5287
|
+
export interface ListBatchRequest {
|
|
5288
|
+
/**
|
|
5289
|
+
* <p>The maximum number of batches to return. If not specified, defaults to 100.</p>
|
|
5290
|
+
* @public
|
|
5291
|
+
*/
|
|
5292
|
+
maxItems?: number | undefined;
|
|
5293
|
+
/**
|
|
5294
|
+
* <p>A pagination token returned from a prior <code>ListBatch</code> call.</p>
|
|
5295
|
+
* @public
|
|
5296
|
+
*/
|
|
5297
|
+
startingToken?: string | undefined;
|
|
5298
|
+
/**
|
|
5299
|
+
* <p>Filter batches by status.</p>
|
|
5300
|
+
* @public
|
|
5301
|
+
*/
|
|
5302
|
+
status?: BatchStatus | undefined;
|
|
5303
|
+
/**
|
|
5304
|
+
* <p>Filter batches by name.</p>
|
|
5305
|
+
* @public
|
|
5306
|
+
*/
|
|
5307
|
+
name?: string | undefined;
|
|
5308
|
+
/**
|
|
5309
|
+
* <p>Filter batches by run group ID.</p>
|
|
5310
|
+
* @public
|
|
5311
|
+
*/
|
|
5312
|
+
runGroupId?: string | undefined;
|
|
5313
|
+
}
|
|
5314
|
+
/**
|
|
5315
|
+
* @public
|
|
5316
|
+
*/
|
|
5317
|
+
export interface ListBatchResponse {
|
|
5318
|
+
/**
|
|
5319
|
+
* <p>A list of batch summary objects. See <code>BatchListItem</code>.</p>
|
|
5320
|
+
* @public
|
|
5321
|
+
*/
|
|
5322
|
+
items?: BatchListItem[] | undefined;
|
|
5323
|
+
/**
|
|
5324
|
+
* <p>A pagination token to retrieve the next page of results. Absent when no further results are available.</p>
|
|
5325
|
+
* @public
|
|
5326
|
+
*/
|
|
5327
|
+
nextToken?: string | undefined;
|
|
5328
|
+
}
|
|
4844
5329
|
/**
|
|
4845
5330
|
* @public
|
|
4846
5331
|
*/
|
|
@@ -5746,6 +6231,11 @@ export interface ListRunsRequest {
|
|
|
5746
6231
|
* @public
|
|
5747
6232
|
*/
|
|
5748
6233
|
runGroupId?: string | undefined;
|
|
6234
|
+
/**
|
|
6235
|
+
* <p>Filter by batch ID.</p>
|
|
6236
|
+
* @public
|
|
6237
|
+
*/
|
|
6238
|
+
batchId?: string | undefined;
|
|
5749
6239
|
/**
|
|
5750
6240
|
* <p>Specify the pagination token from a previous request to retrieve the next page of results.</p>
|
|
5751
6241
|
* @public
|
|
@@ -5787,6 +6277,11 @@ export interface RunListItem {
|
|
|
5787
6277
|
* @public
|
|
5788
6278
|
*/
|
|
5789
6279
|
workflowId?: string | undefined;
|
|
6280
|
+
/**
|
|
6281
|
+
* <p>The run's batch ID.</p>
|
|
6282
|
+
* @public
|
|
6283
|
+
*/
|
|
6284
|
+
batchId?: string | undefined;
|
|
5790
6285
|
/**
|
|
5791
6286
|
* <p>The run's name.</p>
|
|
5792
6287
|
* @public
|
|
@@ -5843,6 +6338,97 @@ export interface ListRunsResponse {
|
|
|
5843
6338
|
*/
|
|
5844
6339
|
nextToken?: string | undefined;
|
|
5845
6340
|
}
|
|
6341
|
+
/**
|
|
6342
|
+
* @public
|
|
6343
|
+
*/
|
|
6344
|
+
export interface ListRunsInBatchRequest {
|
|
6345
|
+
/**
|
|
6346
|
+
* <p>The identifier portion of the run batch ARN.</p>
|
|
6347
|
+
* @public
|
|
6348
|
+
*/
|
|
6349
|
+
batchId: string | undefined;
|
|
6350
|
+
/**
|
|
6351
|
+
* <p>The maximum number of runs to return.</p>
|
|
6352
|
+
* @public
|
|
6353
|
+
*/
|
|
6354
|
+
maxItems?: number | undefined;
|
|
6355
|
+
/**
|
|
6356
|
+
* <p>A pagination token returned from a prior <code>ListRunsInBatch</code> call.</p>
|
|
6357
|
+
* @public
|
|
6358
|
+
*/
|
|
6359
|
+
startingToken?: string | undefined;
|
|
6360
|
+
/**
|
|
6361
|
+
* <p>Filter runs by submission status.</p>
|
|
6362
|
+
* @public
|
|
6363
|
+
*/
|
|
6364
|
+
submissionStatus?: SubmissionStatus | undefined;
|
|
6365
|
+
/**
|
|
6366
|
+
* <p>Filter runs by the customer-provided run setting ID.</p>
|
|
6367
|
+
* @public
|
|
6368
|
+
*/
|
|
6369
|
+
runSettingId?: string | undefined;
|
|
6370
|
+
/**
|
|
6371
|
+
* <p>Filter runs by the HealthOmics-generated run ID.</p>
|
|
6372
|
+
* @public
|
|
6373
|
+
*/
|
|
6374
|
+
runId?: string | undefined;
|
|
6375
|
+
}
|
|
6376
|
+
/**
|
|
6377
|
+
* <p>A single run entry returned by <code>ListRunsInBatch</code>.</p>
|
|
6378
|
+
* @public
|
|
6379
|
+
*/
|
|
6380
|
+
export interface RunBatchListItem {
|
|
6381
|
+
/**
|
|
6382
|
+
* <p>The customer-provided identifier for the run configuration. Use this to correlate results back to the input configuration provided in <code>inlineSettings</code> or <code>s3UriSettings</code>.</p>
|
|
6383
|
+
* @public
|
|
6384
|
+
*/
|
|
6385
|
+
runSettingId?: string | undefined;
|
|
6386
|
+
/**
|
|
6387
|
+
* <p>The HealthOmics-generated identifier for the workflow run. Empty if submission failed.</p>
|
|
6388
|
+
* @public
|
|
6389
|
+
*/
|
|
6390
|
+
runId?: string | undefined;
|
|
6391
|
+
/**
|
|
6392
|
+
* <p>The universally unique identifier (UUID) for the run.</p>
|
|
6393
|
+
* @public
|
|
6394
|
+
*/
|
|
6395
|
+
runInternalUuid?: string | undefined;
|
|
6396
|
+
/**
|
|
6397
|
+
* <p>The unique ARN of the workflow run.</p>
|
|
6398
|
+
* @public
|
|
6399
|
+
*/
|
|
6400
|
+
runArn?: string | undefined;
|
|
6401
|
+
/**
|
|
6402
|
+
* <p>The submission outcome for this run.</p>
|
|
6403
|
+
* @public
|
|
6404
|
+
*/
|
|
6405
|
+
submissionStatus?: SubmissionStatus | undefined;
|
|
6406
|
+
/**
|
|
6407
|
+
* <p>The error category for a failed submission. See the run-level failure table in the HealthOmics User Guide for details on each value.</p>
|
|
6408
|
+
* @public
|
|
6409
|
+
*/
|
|
6410
|
+
submissionFailureReason?: string | undefined;
|
|
6411
|
+
/**
|
|
6412
|
+
* <p>A detailed message describing the submission failure.</p>
|
|
6413
|
+
* @public
|
|
6414
|
+
*/
|
|
6415
|
+
submissionFailureMessage?: string | undefined;
|
|
6416
|
+
}
|
|
6417
|
+
/**
|
|
6418
|
+
* @public
|
|
6419
|
+
*/
|
|
6420
|
+
export interface ListRunsInBatchResponse {
|
|
6421
|
+
/**
|
|
6422
|
+
* <p>A list of run entries in the batch. See <code>RunBatchListItem</code>.</p>
|
|
6423
|
+
* @public
|
|
6424
|
+
*/
|
|
6425
|
+
runs?: RunBatchListItem[] | undefined;
|
|
6426
|
+
/**
|
|
6427
|
+
* <p>A pagination token to retrieve the next page of results. Absent when the last run has been returned.</p>
|
|
6428
|
+
* @public
|
|
6429
|
+
*/
|
|
6430
|
+
nextToken?: string | undefined;
|
|
6431
|
+
}
|
|
5846
6432
|
/**
|
|
5847
6433
|
* @public
|
|
5848
6434
|
*/
|
|
@@ -6658,6 +7244,66 @@ export interface StartReferenceImportJobResponse {
|
|
|
6658
7244
|
*/
|
|
6659
7245
|
creationTime: Date | undefined;
|
|
6660
7246
|
}
|
|
7247
|
+
/**
|
|
7248
|
+
* @public
|
|
7249
|
+
*/
|
|
7250
|
+
export interface StartRunBatchRequest {
|
|
7251
|
+
/**
|
|
7252
|
+
* <p>An optional user-friendly name for the run batch.</p>
|
|
7253
|
+
* @public
|
|
7254
|
+
*/
|
|
7255
|
+
batchName?: string | undefined;
|
|
7256
|
+
/**
|
|
7257
|
+
* <p>A client token used to deduplicate retry requests and prevent duplicate batches from being created.</p>
|
|
7258
|
+
* @public
|
|
7259
|
+
*/
|
|
7260
|
+
requestId?: string | undefined;
|
|
7261
|
+
/**
|
|
7262
|
+
* <p>AWS tags to associate with the batch resource. These tags are not inherited by individual runs. To tag individual runs, use <code>defaultRunSetting.runTags</code>.</p>
|
|
7263
|
+
* @public
|
|
7264
|
+
*/
|
|
7265
|
+
tags?: Record<string, string> | undefined;
|
|
7266
|
+
/**
|
|
7267
|
+
* <p>Shared configuration applied to all runs in the batch. See <code>DefaultRunSetting</code>.</p>
|
|
7268
|
+
* @public
|
|
7269
|
+
*/
|
|
7270
|
+
defaultRunSetting: DefaultRunSetting | undefined;
|
|
7271
|
+
/**
|
|
7272
|
+
* <p>The individual run configurations. Specify exactly one of <code>inlineSettings</code> or <code>s3UriSettings</code>. See <code>BatchRunSettings</code>.</p>
|
|
7273
|
+
* @public
|
|
7274
|
+
*/
|
|
7275
|
+
batchRunSettings: BatchRunSettings | undefined;
|
|
7276
|
+
}
|
|
7277
|
+
/**
|
|
7278
|
+
* @public
|
|
7279
|
+
*/
|
|
7280
|
+
export interface StartRunBatchResponse {
|
|
7281
|
+
/**
|
|
7282
|
+
* <p>The identifier portion of the run batch ARN.</p>
|
|
7283
|
+
* @public
|
|
7284
|
+
*/
|
|
7285
|
+
id?: string | undefined;
|
|
7286
|
+
/**
|
|
7287
|
+
* <p>The unique ARN of the run batch.</p>
|
|
7288
|
+
* @public
|
|
7289
|
+
*/
|
|
7290
|
+
arn?: string | undefined;
|
|
7291
|
+
/**
|
|
7292
|
+
* <p>The initial status of the run batch.</p>
|
|
7293
|
+
* @public
|
|
7294
|
+
*/
|
|
7295
|
+
status?: BatchStatus | undefined;
|
|
7296
|
+
/**
|
|
7297
|
+
* <p>The universally unique identifier (UUID) for the run batch.</p>
|
|
7298
|
+
* @public
|
|
7299
|
+
*/
|
|
7300
|
+
uuid?: string | undefined;
|
|
7301
|
+
/**
|
|
7302
|
+
* <p>AWS tags associated with the run batch.</p>
|
|
7303
|
+
* @public
|
|
7304
|
+
*/
|
|
7305
|
+
tags?: Record<string, string> | undefined;
|
|
7306
|
+
}
|
|
6661
7307
|
/**
|
|
6662
7308
|
* @public
|
|
6663
7309
|
*/
|